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Allee Effects, Colonization, and Extinction: The Surprising Benefits of Demographic Stochasticity. Allee效应,殖民化和灭绝:人口统计学随机性的惊人好处。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-07-01 Epub Date: 2025-05-15 DOI: 10.1086/735833
Angela Gong, Emma J Walker, Benjamin Gilbert

AbstractDemographic stochasticity and Allee effects are two common mechanisms that increase extinction risk in small populations. High demographic stochasticity produces population fluctuations that cause extinction in small populations. Meanwhile, strong Allee effects create low-density thresholds, where growth rates are negative below the threshold and positive above. We hypothesized that stochastic fluctuations may drive populations over these thresholds, increasing the probability that a population establishes in a habitat. To test this hypothesis, we utilized properties of discrete-time Markov processes and a Ricker model with an Allee effect to quantify colonization and extinction rates. We show that demographic stochasticity can increase colonization rates over a range of carrying capacities in populations with strong Allee effects. In contrast, while higher demographic stochasticity always increases extinction rates of established populations, waiting times to extinction due to demographic stochasticity often exceed thousands of generations, even at relatively small carrying capacities (K=50). Given the frequency of catastrophic disturbances such as fires, extinction rates from demographic stochasticity are near negligible even in small populations with strong Allee effects. Thus, the net effect of demographic stochasticity is often positive. Overall, our study provides novel insights into a mechanism through which demographic stochasticity promotes species persistence.

摘要人口统计学随机性和Allee效应是增加小种群灭绝风险的两种常见机制。人口统计学的高随机性产生了导致小种群灭绝的种群波动。与此同时,强烈的Allee效应产生了低密度阈值,即增长率在阈值以下为负,在阈值以上为正。我们假设随机波动可能会使种群超过这些阈值,从而增加种群在栖息地建立的可能性。为了验证这一假设,我们利用离散时间马尔可夫过程的特性和带有Allee效应的Ricker模型来量化殖民化和灭绝率。我们表明,在具有强Allee效应的种群中,人口统计学随机性可以在一定的承载能力范围内增加殖民化率。相比之下,虽然较高的人口随机性总是增加已建立种群的灭绝率,但由于人口随机性导致的灭绝等待时间往往超过数千代,即使在相对较小的承载能力下(K=50)。考虑到诸如火灾等灾难性干扰的频率,即使在具有强Allee效应的小种群中,人口统计学随机性造成的灭绝率几乎可以忽略不计。因此,人口统计学随机性的净效应往往是积极的。总的来说,我们的研究为人口统计学随机性促进物种持久性的机制提供了新的见解。
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引用次数: 0
Cytoplasmic Male Sterility Declines in the Presence of Resistant Nuclear Backgrounds. 抗核背景下细胞质雄性不育性下降。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-07-01 Epub Date: 2025-05-15 DOI: 10.1086/735820
Fanny Laugier, Kévin Béthune, Florian Plumel, Céline Froissard, Jean-Marc Donnay, Timothée Chenin, François Rousset, Patrice David

AbstractGenomic conflicts arise when different genes in a genome are selected for opposite phenotypic effects. One well-known conflict occurs in plants, between mitochondrial genes causing cytoplasmic male sterility (CMS) and their nuclear suppressors, called restorers of male fertility. The evolution of CMS-restorer polymorphisms has been modeled many times, but empirical validations remain indirect. Here we use a new biological model, a freshwater snail, to directly observe evolutionary trajectories. In this species, CMS-associated mitogenomes coexist with male-fertile ones in populations. Models predict such a coexistence when nuclear restorers make CMS mitogenomes less fit than male-fertile ones, thus preventing the fixation of CMS. During 11 generations of experimental evolution, we observed rapid decreases in the frequency of CMS mitogenomes in a restorer-rich nuclear background, with an estimated ∼20% fitness disadvantage, consistent with theoretical conditions for the maintenance of cytonuclear polymorphism. In parallel, in an ancillary experiment, eggs laid by isolated snails carrying CMS showed a reduced hatching rate. Although significant, this reduction did not reach 20%, suggesting that fitness differentials in populations are enhanced by competition or rely on unmeasured traits. Our study illustrates the speed at which evolution can proceed in the context of cytonuclear conflicts over sex allocation.

摘要基因组冲突是指基因组中的不同基因被选择产生相反的表型效应。一个众所周知的冲突发生在植物中,即引起细胞质雄性不育(CMS)的线粒体基因和它们的核抑制基因之间的冲突。cms -恢复体多态性的进化已经被多次建模,但经验验证仍然是间接的。在这里,我们使用一种新的生物模型,淡水蜗牛,来直接观察进化轨迹。在这个物种中,cms相关的有丝分裂基因组在种群中与雄性可育的有丝分裂基因组共存。模型预测,当核恢复者使CMS有丝分裂基因组不如男性可育的有丝分裂基因组适合时,就会出现这种共存,从而阻止CMS的固定。在11代的实验进化中,我们观察到在富含恢复者的核背景下,CMS有丝分裂基因组的频率迅速下降,估计有20%的适应度劣势,这与维持细胞核多态性的理论条件一致。与此同时,在一项辅助实验中,携带CMS的分离蜗牛产下的卵显示出孵化率降低。尽管这一减少幅度很大,但没有达到20%,这表明种群中的适应性差异是由竞争或依赖于未测量的特征而增强的。我们的研究表明,在性别分配上的细胞核冲突的背景下,进化可以以何种速度进行。
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引用次数: 0
A Female-Specific Color Signal? Black-Mottled Bills Indicate Breeding in Female Common Waxbills. 女性特有的颜色信号?黑色斑驳的喙表明雌性普通蜡喙正在繁殖。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-07-01 Epub Date: 2025-05-15 DOI: 10.1086/735832
Gonçalo C Cardoso, Helena Reis Batalha

AbstractFemale ornamentation is common in birds but usually resembles that of males. In contrast to this general pattern, here we show that the red bill of wild adult common waxbills (Estrilda astrild) often becomes mottled with black when females breed. This color change is not explained by reallocation of red carotenoid pigments away from the bill but requires deposition of melanin pigments. The change is very noticeable and makes female bills resemble the black bill of nestlings and fledglings. Perhaps this color change exploits useful innate responses of males toward nestlings, such as ceasing mating-related behavior and initiating parental care. Unlike the vast majority of female signals and ornaments, black-mottled bills are not derived from a male trait, but they are derived from a nestling trait, in accordance with the idea that color signals often evolve using preexisting developmental paths.

摘要雌鸟的纹饰在鸟类中很常见,但通常与雄鸟的纹饰相似。与这种普遍模式相反,我们在这里展示了野生成年普通蜡喙(Estrilda astrild)的红色喙在雌性繁殖时经常变成黑色斑驳。这种颜色变化不能解释为红色类胡萝卜素从喙上重新分配,而是需要黑色素的沉积。这种变化是非常明显的,使雌性的喙类似于雏鸟和雏鸟的黑色喙。也许这种颜色的变化利用了雄性对雏鸟有益的先天反应,比如停止与交配有关的行为,开始亲代照顾。与绝大多数雌性信号和装饰不同,黑色斑驳的喙不是来自雄性的特征,而是来自雏鸟的特征,这与颜色信号通常是通过预先存在的发育路径进化而来的观点一致。
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引用次数: 0
Poles Apart: The Structure and Composition of the Bird Community in Bamboo in the Eastern Himalaya. 两极之隔:东喜马拉雅竹林鸟类群落的结构与组成。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-21 DOI: 10.1086/735417
Sidharth Srinivasan, Dambar Kumar Pradhan, Shambu Rai, Aman Biswakarma, Umesh Srinivasan

AbstractBamboo is a unique, dynamic, and diverse group of plants shown to harbor communities of obligate specialists. Such phenomena, however, have primarily been investigated in the Neotropics. Additionally, mechanisms underlying specialist bamboo communities are generally poorly understood. By studying bird and arthropod communities across two seasons in bamboo and adjacent rainforest in the Eastern Himalaya, we provide some of the first systematic evidence of bamboo-specialist communities. We show that arthropod communities differ significantly between habitats and across seasons and that bamboo-specialist birds likely feed on distinct arthropods within bamboo sheaths using specialized bills and unique foraging behaviors in this part of the world. We hypothesize that this bird-bamboo association could be driven by a dietary specialization to the unique arthropods in bamboo. These results contribute to our understanding of how species can specialize on temporally dynamic resources and highlight the need for more research on such lesser-known habitats.

摘要:竹是一种独特的、动态的、多样化的植物群,显示出有专门的专家群体。然而,这些现象主要是在新热带地区进行的研究。此外,专家竹群落的潜在机制通常知之甚少。通过研究喜马拉雅东部两个季节的竹林和邻近雨林中的鸟类和节肢动物群落,我们首次提供了竹林专家群落的系统证据。研究表明,节肢动物群落在不同的栖息地和季节之间存在显著差异,在这个地区,以竹子为食的鸟类可能会使用特殊的喙和独特的觅食行为来捕食竹鞘内不同的节肢动物。我们假设这种鸟类与竹子的联系可能是由竹子中独特的节肢动物的饮食专业化所驱动的。这些结果有助于我们理解物种如何专注于时间动态资源,并突出了对这种鲜为人知的栖息地进行更多研究的必要性。
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引用次数: 0
Seeing Halos: Spatial and Consumer-Resource Constraints to Landscapes of Fear. 看到光环:恐惧景观的空间和消费者资源约束。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-02 DOI: 10.1086/735688
Theresa W Ong, Lisa C McManus, Vítor V Vasconcelos, Luojun Yang, Chenyang Su

AbstractVegetation-free space, or "halos," surrounding habitat patches are visually striking spatial phenomena observed in various ecosystems. These halos are linked to the landscape of fear hypothesis, where risk-averse herbivores concentrate grazing near safe shelters within their habitat. We develop theory demonstrating how habitat distribution shapes trophic interactions, leading to alternative stable states in spatial patterns. Using coral reefs as a model system, we investigate the relationship between halo patterns and predator populations. Specifically, we address the inconsistency between theoretical predictions and empirical observations, where halos are absent in some protected reefs and their sizes are uncorrelated with predator abundance. Our findings reveal that long-term coral distribution patterns influence trophic interactions, supporting the landscape of fear hypothesis. When coral patches are dispersed, herbivore shelter from predators is more evenly distributed across the seascape, facilitating overgrazing and halo oscillation. When coral patches are clustered, limited shelter stabilizes halos, but reduced herbivore limitation can also drive critical transitions to cycles with low vegetation that are difficult to reverse. Discordance between theory and observations may therefore arise from differences in underlying spatial shelter distribution, with broad implications for how landscapes of fear emerge from patchy ecosystems to signal resilience.

摘要生境斑块周围的无植被空间或“光晕”是在各种生态系统中观察到的视觉上引人注目的空间现象。这些光环与恐惧景观假说有关,即厌恶风险的食草动物集中在栖息地内的安全避难所附近放牧。我们发展了理论,证明栖息地分布如何塑造营养相互作用,导致空间格局的稳定状态。利用珊瑚礁作为模型系统,我们研究了光环模式与捕食者种群之间的关系。具体来说,我们解决了理论预测和经验观察之间的不一致,在一些受保护的珊瑚礁中没有光晕,它们的大小与捕食者的丰度无关。我们的研究结果表明,长期珊瑚分布模式影响营养相互作用,支持恐惧景观假说。当珊瑚斑块分散时,食草动物躲避捕食者的庇护所更均匀地分布在整个海景上,促进了过度放牧和晕振荡。当珊瑚斑块聚集时,有限的庇护所稳定了光晕,但食草动物限制的减少也会推动向低植被循环的关键转变,这很难逆转。因此,理论和观察之间的不一致可能源于潜在空间庇护所分布的差异,这对如何从斑块生态系统中出现恐惧景观以显示复原力具有广泛的影响。
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引用次数: 0
Genetic Load, Eco-Evolutionary Feedback, and Extinction in Metapopulations. 遗传负荷、生态进化反馈和大种群的灭绝。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-24 DOI: 10.1086/735562
Oluwafunmilola Olusanya, Ksenia Khudiakova, Himani Sachdeva

AbstractHabitat fragmentation poses a significant risk to population survival, causing both demographic stochasticity and genetic drift within local populations to increase, thereby increasing genetic load. Higher load causes population numbers to decline, which reduces the efficiency of selection and further increases load, resulting in a positive feedback that may drive entire populations to extinction. Here, we investigate this eco-evolutionary feedback in a metapopulation consisting of local demes connected via migration, with individuals subject to deleterious mutation at a large number of loci. We first analyze the determinants of load under soft selection, where population sizes are fixed, and then build on this to understand hard selection, where population sizes and load coevolve. We show that under soft selection, very little gene flow (less than one migrant per generation) is enough to prevent fixation of deleterious alleles. By contrast, much higher levels of migration are required to mitigate load and prevent extinction when selection is hard, with critical migration thresholds for metapopulation persistence increasing sharply as the genome-wide deleterious mutation rate becomes comparable to the baseline population growth rate. Moreover, critical migration thresholds are highest if deleterious mutations have intermediate selection coefficients but lower if alleles are predominantly recessive rather than additive (due to more efficient purging of recessive load within local populations). Our analysis is based on a combination of analytical approximations and simulations, allowing for a more comprehensive understanding of the factors influencing load and extinction in fragmented populations.

生境破碎化对种群生存造成重大威胁,导致种群内人口统计学随机性和遗传漂变增加,从而增加遗传负荷。更高的负荷导致种群数量下降,从而降低了选择效率,进一步增加了负荷,导致正反馈,可能导致整个种群灭绝。在这里,我们研究了这种生态进化反馈,在一个由通过迁移连接的局部demes组成的元种群中,个体在大量位点上遭受有害突变。我们首先分析软选择下的负荷决定因素,在软选择下,种群规模是固定的,然后在此基础上理解硬选择,种群规模和负荷共同进化。我们表明,在软选择下,很少的基因流动(每代少于一次迁移)足以防止有害等位基因的固定。相比之下,当选择困难时,需要更高水平的迁移来减轻负荷和防止灭绝,随着全基因组有害突变率与基线种群增长率相当,超种群持久性的关键迁移阈值急剧增加。此外,如果有害突变具有中间选择系数,则临界迁移阈值最高,而如果等位基因主要是隐性的而不是加性的(由于在当地种群中更有效地清除隐性负荷),则临界迁移阈值较低。我们的分析是基于分析近似和模拟的结合,可以更全面地了解影响碎片化种群负荷和灭绝的因素。
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引用次数: 0
Introducing a New Article Type for The American Naturalist. 为美国博物学家介绍一种新的文章类型。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-16 DOI: 10.1086/735689
Volker Rudolf
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引用次数: 0
Beyond Size Dimorphism: The Past, Present, and Future of Rensch's Rule. 超越尺寸二态:伦施规则的过去、现在和未来。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-23 DOI: 10.1086/735583
Ken S Toyama

AbstractA pattern of allometry in which the degree of male-biased sexual size dimorphism (SSD) increases with species body size is known as "Rensch's rule." Over the past decades, a growing amount of Rensch's rule studies has advanced our understanding of SSD, our knowledge of its prevalence in nature, and our comprehension of the mechanisms underlying its evolution. However, Bernhard Rensch, when describing the pattern for the first time, considered the allometry of SSD only as a special case of a more general pattern in which dimorphism in any relative sexual difference increased with body size. In this perspective I revisit the history of Rensch's rule, starting with its popularization in recent decades, then diving into the original works by Rensch to rediscover his original observations, and finally discussing the implications of studying Rensch's pattern beyond its applications to SSD. The strong bias toward body size in the study of Rensch's rule has proven valuable regarding our understanding of the evolution of SSD. Using empirical examples, I propose, however, that expanding the study of the pattern to other traits might prove insightful for the general study of sexual dimorphism and phenotypic diversity.

雄性偏向性大小二态性(SSD)的程度随物种体型的增加而增加的异速生长模式被称为“Rensch规则”。在过去的几十年里,越来越多的Rensch规则研究提高了我们对SSD的理解,我们对其在自然界中普遍存在的认识,以及我们对其演变机制的理解。然而,Bernhard Rensch在首次描述这种模式时,认为SSD异速发育只是一种更普遍的模式的特殊情况,在这种模式中,任何相对性别差异的二态性都随着体型的增加而增加。在这个视角下,我重新审视了伦施法则的历史,从近几十年的普及开始,然后深入到伦施的原创作品中,重新发现他最初的观察,最后讨论了研究伦施模式在SSD应用之外的意义。在Rensch规则的研究中,对身体大小的强烈偏见已被证明对我们理解SSD的进化有价值。然而,通过使用经验例子,我建议将这种模式的研究扩展到其他特征,可能会对两性二态性和表型多样性的一般研究产生深刻的见解。
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引用次数: 0
Allee Effects and Coexistence. 小巷效应与共存。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-07 DOI: 10.1086/735419
Emma J Walker, Benjamin Gilbert

AbstractAllee effects are common to diverse taxa, but their consequences for coexistence are rarely considered by ecologists. Recent research has suggested that Allee effects are incompatible with modern coexistence theory or that their impacts on coexistence are no different from other sources of positive density dependence that generate alternate stable states through priority effects. We use a graphical approach that builds on mathematically robust theory to develop simple conditions for coexistence and alternate stable states when an Allee effect is present. We show that weak Allee effects (those that do not depress population growth rates below zero in the absence of competition) can be integrated with modern coexistence theory but often produce outcomes distinct from other priority effects. This integration allows us to determine how Allee effects alter stabilizing and fitness differences. Importantly, we characterize a high-density criterion for a third alternate stable state that indicates species coexistence even when mutual invasibility is not met. Strong Allee effects (those that preclude invasibility even in the absence of competitors) permit coexistence only when the high-density criterion is satisfied. Our model offers an intuitive extension of modern coexistence theory that accounts for more than two alternative stable states and provides a guide for empirical research on how Allee effects structure ecological diversity.

摘要/ abstract摘要:生境效应在不同的分类群中是普遍存在的,但生态学家很少考虑它们对共存的影响。最近的研究表明,Allee效应与现代共存理论不相容,或者它们对共存的影响与其他通过优先效应产生交替稳定状态的正密度依赖来源没有什么不同。我们使用图形方法,建立在数学上稳健的理论,以发展简单的共存条件和交替稳定状态时,阿勒效应存在。我们表明,弱Allee效应(那些在缺乏竞争的情况下不会使人口增长率降至零以下的效应)可以与现代共存理论相结合,但往往产生与其他优先效应不同的结果。这种整合使我们能够确定Allee效应如何改变稳定性和适合度差异。重要的是,我们描述了第三种交替稳定状态的高密度标准,表明即使不满足相互入侵,物种也可以共存。强Allee效应(即使在没有竞争者的情况下也排除不可侵入性)只有在满足高密度标准时才允许共存。该模型为现代共存理论提供了一个直观的扩展,该理论可以解释两种以上的可选稳定状态,并为Allee效应如何结构生态多样性的实证研究提供了指导。
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引用次数: 0
Macroevolutionary Divergence along Allometric Lines of Least Resistance in Frog Hindlimb Traits and Its Effect on Locomotor Evolution. 青蛙后肢最小阻力异速谱的宏观进化分化及其对运动进化的影响。
IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-02 DOI: 10.1086/735569
Monique N Simon, Elodie A Courtois, Anthony Herrel, Daniel S Moen

AbstractUnderstanding whether and why microevolutionary patterns of trait covariation match macroevolutionary divergence is essential for linking evolution at different timescales. However, recent work has focused on developmental constraints for alignment between intraspecific variation and divergence, neglecting a potential role of natural selection on function to connect these scales. Here, we compare the support for the selection and constraint hypotheses to explain both phenotypic trait covariation and species divergence. To test these hypotheses, we collected data on hindlimb and jumping performance traits within and across species of two frog genera. We compared patterns of within-species phenotypic variation (the P matrix) with divergence and selective covariance matrices, from which we could extract the major axes of the realized adaptive landscape (AL), the directions in which adaptive peaks shifted the most over evolutionary time. We also tested whether the major axes of the AL were related to selection on jumping performance. We found high alignment between patterns of variation across scales. Most divergence occurred in allometric size, defined as the first eigenvector of the P matrix. However, jumping performance gradients were unaligned with the major axes of the AL and the P matrix. Across species, however, evolution of maximum acceleration showed a strong negative relationship with changes in allometric size. We infer that the jumping peak evolved under fluctuating selection, and species have tracked the peak along the direction of most within-species variation, allometric size. We conclude that long-term hindlimb divergence was constrained by developmental interactions among traits associated with growth and not net directional selection. Nonetheless, divergence on size indirectly influenced jumping evolution.

摘要了解性状共变的微观进化模式是否与宏观进化差异相匹配以及为什么匹配,对于联系不同时间尺度上的进化至关重要。然而,最近的研究主要集中在种内变异和分化之间的发育限制上,而忽略了自然选择在连接这些尺度的功能上的潜在作用。在此,我们比较了选择假说和约束假说对解释表型性状共变异和物种分化的支持程度。为了验证这些假设,我们收集了两种蛙属内部和跨种的后肢和跳跃性能特征数据。我们将种内表型变异模式(P矩阵)与发散矩阵和选择性协方差矩阵进行了比较,从中我们可以提取出已实现的适应景观(AL)的主要轴,即适应峰值在进化时间内移动最多的方向。我们还测试了AL的主要轴是否与跳跃性能的选择有关。我们发现不同尺度的变化模式之间高度一致。大多数散度发生在异速大小,定义为P矩阵的第一个特征向量。然而,跳跃性能梯度与AL和P矩阵的主轴不对齐。然而,在不同物种中,最大加速度的进化与异速尺寸的变化呈强烈的负相关。我们推测跳跃峰是在波动选择下进化而来的,并且物种沿着物种内变异最大的方向——异速生长大小——跟踪了跳跃峰。我们得出结论,长期后肢分化受到与生长有关的性状之间的发育相互作用的制约,而不是净方向选择。尽管如此,体型上的差异间接影响了跳跃进化。
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引用次数: 0
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