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Antibody-mediated immunity to SARS-CoV-2 spike. 对 SARS-CoV-2 穗状病毒的抗体介导免疫。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 Epub Date: 2022-08-22 DOI: 10.1016/bs.ai.2022.07.001
John M Errico, Lucas J Adams, Daved H Fremont

Despite effective spike-based vaccines and monoclonal antibodies, the SARS-CoV-2 pandemic continues more than two and a half years post-onset. Relentless investigation has outlined a causative dynamic between host-derived antibodies and reciprocal viral subversion. Integration of this paradigm into the architecture of next generation antiviral strategies, predicated on a foundational understanding of the virology and immunology of SARS-CoV-2, will be critical for success. This review aims to serve as a primer on the immunity endowed by antibodies targeting SARS-CoV-2 spike protein through a structural perspective. We begin by introducing the structure and function of spike, polyclonal immunity to SARS-CoV-2 spike, and the emergence of major SARS-CoV-2 variants that evade immunity. The remainder of the article comprises an in-depth dissection of all major epitopes on SARS-CoV-2 spike in molecular detail, with emphasis on the origins, neutralizing potency, mechanisms of action, cross-reactivity, and variant resistance of representative monoclonal antibodies to each epitope.

尽管使用了有效的尖峰疫苗和单克隆抗体,SARS-CoV-2 大流行仍在发病后两年半的时间里持续不断。不懈的研究已经勾勒出宿主衍生抗体与病毒相互颠覆之间的因果动态。在对 SARS-CoV-2 的病毒学和免疫学有了基本了解的基础上,将这一模式纳入下一代抗病毒策略的架构将是成功的关键。本综述旨在从结构角度介绍针对 SARS-CoV-2 棘波蛋白的抗体所赋予的免疫力。我们首先介绍了尖峰蛋白的结构和功能、针对 SARS-CoV-2 尖峰蛋白的多克隆免疫,以及逃避免疫的 SARS-CoV-2 主要变种的出现。文章的其余部分包括对 SARS-CoV-2 穗状病毒上所有主要表位的分子细节的深入剖析,重点是每个表位的来源、中和效力、作用机制、交叉反应和代表性单克隆抗体的变异抗性。
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引用次数: 0
Development and function of tissue-resident memory B cells. 组织驻留记忆B细胞的发育和功能。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.1016/bs.ai.2022.08.001
Changfeng Chen, Brian J Laidlaw

Barrier tissues are the primary site of infection for pathogens likely to cause future pandemics. Tissue-resident lymphocytes can rapidly detect pathogens upon infection of barrier tissues and are critical in preventing viral spread. However, most vaccines fail to induce tissue-resident lymphocytes and are instead reliant on circulating antibodies to mediate protective immunity. Circulating antibody titers wane over time following vaccination leaving individuals susceptible to breakthrough infections by variant viral strains that evade antibody neutralization. Memory B cells were recently found to establish tissue residence following infection of barrier tissues. Here, we summarize emerging evidence for the importance of tissue-resident memory B cells in the establishment of protective immunity against viral and bacterial challenge. We also discuss the role of tissue-resident memory B cells in regulating the progression of non-infectious diseases. Finally, we examine new approaches to develop vaccines capable of eliciting barrier immunity.

屏障组织是可能导致未来大流行的病原体的主要感染部位。组织驻留淋巴细胞可以在屏障组织感染时迅速检测病原体,并在防止病毒传播方面发挥关键作用。然而,大多数疫苗不能诱导组织驻留淋巴细胞,而是依赖于循环抗体来介导保护性免疫。接种疫苗后,循环抗体滴度随着时间的推移而减弱,使个体容易受到逃避抗体中和的变异病毒株的突破性感染。记忆B细胞最近被发现在屏障组织感染后建立组织驻留。在这里,我们总结了组织驻留记忆B细胞在建立针对病毒和细菌攻击的保护性免疫中的重要性的新证据。我们还讨论了组织驻留记忆B细胞在调节非感染性疾病进展中的作用。最后,我们研究了开发能够引发屏障免疫的疫苗的新方法。
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引用次数: 4
Genetic susceptibility to autoimmunity-Current status and challenges. 自身免疫的遗传易感性——现状和挑战。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.1016/bs.ai.2022.08.004
Miaozhen Huang, Huji Xu

Autoimmune diseases (ADs) often arise from a combination of genetic and environmental triggers that disrupt the immune system's capability to properly tolerate body self-antigens. Familial studies provided the earliest insights into the risk loci of such diseases, while genome-wide association studies (GWAS) significantly broadened the horizons. A drug targeting a prominent pathological pathway can be applied to multiple indications sharing overlapping mechanisms. Advances in genomic technologies used in genetic studies provide critical insights into future research on gene-environment interactions in autoimmunity. This Review summarizes the history and recent advances in the understanding of genetic susceptibility to ADs and related immune disorders, including coronavirus disease 2019 (COVID-19), and their indications for the development of diagnostic or prognostic markers for translational applications.

自身免疫性疾病(ADs)通常是由遗传和环境因素共同引起的,这些因素破坏了免疫系统正确耐受身体自身抗原的能力。家族性研究提供了对此类疾病风险位点的最早见解,而全基因组关联研究(GWAS)大大拓宽了视野。针对一个突出病理通路的药物可以应用于多个适应症,共享重叠机制。基因研究中使用的基因组技术的进步为自身免疫中基因-环境相互作用的未来研究提供了重要的见解。本文总结了ad和相关免疫疾病(包括2019冠状病毒病(COVID-19))遗传易感性的历史和最新进展,以及开发用于翻译应用的诊断或预后标志物的适应症。
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引用次数: 1
The role of B cells in the development, progression, and treatment of lymphomas and solid tumors. B细胞在淋巴瘤和实体瘤的发生、进展和治疗中的作用。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.1016/bs.ai.2022.07.002
Jennifer K Lue, Stephanie Downs-Canner, Jayanta Chaudhuri

B cells are integral components of the mammalian immune response as they have the ability to generate antibodies against an almost infinite array of antigens. Over the past several decades, significant scientific progress has been made in understanding that this enormous B cell diversity contributes to pathogen clearance. However, our understanding of the humoral response to solid tumors and to tumor-specific antigens is unclear. In this review, we first discuss how B cells interact with other cells in the tumor microenvironment and influence the development and progression of various solid tumors. The ability of B lymphocytes to generate antibodies against a diverse repertoire of antigens and subsequently tailor the humoral immune response to specific pathogens relies on their ability to undergo genomic alterations during their development and differentiation. We will discuss key transforming events that lead to the development of B cell lymphomas. Overall, this review provides a foundation for innovative therapeutic interventions for both lymphoma and solid tumor malignancies.

B细胞是哺乳动物免疫反应的组成部分,因为它们有能力产生针对几乎无限抗原的抗体。在过去的几十年里,在理解这种巨大的B细胞多样性有助于病原体清除方面取得了重大的科学进展。然而,我们对实体瘤和肿瘤特异性抗原的体液反应的了解尚不清楚。在这篇综述中,我们首先讨论了B细胞如何在肿瘤微环境中与其他细胞相互作用并影响各种实体瘤的发生和进展。B淋巴细胞产生针对多种抗原的抗体并随后针对特定病原体定制体液免疫反应的能力依赖于它们在发育和分化过程中经历基因组改变的能力。我们将讨论导致B细胞淋巴瘤发展的关键转化事件。总之,本综述为淋巴瘤和实体瘤恶性肿瘤的创新治疗干预提供了基础。
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引用次数: 0
The role of properdin and Factor H in disease. properdin和因子H在疾病中的作用。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.1016/bs.ai.2021.12.001
Claudio Cortes, Caroline Desler, Amanda Mazzoli, Jin Y Chen, Viviana P Ferreira

The complement system consists of three pathways (alternative, classical, and lectin) that play a fundamental role in immunity and homeostasis. The multifunctional role of the complement system includes direct lysis of pathogens, tagging pathogens for phagocytosis, promotion of inflammatory responses to control infection, regulation of adaptive cellular immune responses, and removal of apoptotic/dead cells and immune complexes from circulation. A tight regulation of the complement system is essential to avoid unwanted complement-mediated damage to the host. This regulation is ensured by a set of proteins called complement regulatory proteins. Deficiencies or malfunction of these regulatory proteins may lead to pro-thrombotic hematological diseases, renal and ocular diseases, and autoimmune diseases, among others. This review focuses on the importance of two complement regulatory proteins of the alternative pathway, Factor H and properdin, and their role in human diseases with an emphasis on: (a) characterizing the main mechanism of action of Factor H and properdin in regulating the complement system and protecting the host from complement-mediated attack, (b) describing the dysregulation of the alternative pathway as a result of deficiencies, or mutations, in Factor H and properdin, (c) outlining the clinical findings, management and treatment of diseases associated with mutations and deficiencies in Factor H, and (d) defining the unwanted and inadequate functioning of properdin in disease, through a discussion of various experimental research findings utilizing in vitro, mouse and human models.

补体系统由三种途径(替代途径、经典途径和凝集素途径)组成,它们在免疫和体内平衡中起着重要作用。补体系统的多功能作用包括直接裂解病原体,标记病原体进行吞噬,促进炎症反应以控制感染,调节适应性细胞免疫反应,清除循环中的凋亡/死亡细胞和免疫复合物。补体系统的严格调控是必不可少的,以避免不必要的补体介导的损害宿主。这种调节是由一组叫做补体调节蛋白的蛋白质来保证的。这些调节蛋白的缺乏或功能障碍可能导致促血栓性血液病、肾脏和眼部疾病以及自身免疫性疾病等。本文综述了替代途径中的两种补体调节蛋白因子H和properdin的重要性及其在人类疾病中的作用,重点是:(a)描述因子H和properdin在调节补体系统和保护宿主免受补体介导的攻击方面的主要作用机制,(b)描述由于因子H和properdin的缺陷或突变而导致的替代途径的失调,(c)概述与因子H突变和缺陷相关的疾病的临床发现、管理和治疗。(d)通过对利用体外、小鼠和人体模型的各种实验研究结果的讨论,确定properdin在疾病中不需要的和不适当的功能。
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引用次数: 2
Self-referential immune recognition through C-type lectin receptors. 通过c型凝集素受体的自我参照免疫识别。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.1016/bs.ai.2022.09.001
Carla Guenther, Masamichi Nagae, Sho Yamasaki

The term "lectin" is derived from the Latin word lego- (aggregate) (Boyd & Shapleigh, 1954). Indeed, lectins' folds can flexibly alter their pocket structures just like Lego blocks, which enables them to grab a wide-variety of substances. Thus, this useful fold is well-conserved among various organisms. Through evolution, prototypic soluble lectins acquired transmembrane regions and signaling motifs to become C-type lectin receptors (CLRs). While CLRs seem to possess certain intrinsic affinity to self, some CLRs adapted to efficiently recognize glycoconjugates present in pathogens as pathogen-associated molecular patterns (PAMPs) and altered self. CLRs further extended their diversity to recognize non-glycosylated targets including pathogens and self-derived molecules. Thus, CLRs seem to have developed to monitor the internal/external stresses to maintain homeostasis by sensing various "unfamiliar" targets. In this review, we will summarize recent advances in our understanding of CLRs, their ligands and functions and discuss future perspectives.

术语“凝集素”来源于拉丁单词lego-(集合)(Boyd & Shapleigh, 1954)。事实上,凝集素的折叠可以灵活地改变它们的口袋结构,就像乐高积木一样,这使它们能够抓住各种各样的物质。因此,这种有用的折叠在各种生物体中保存得很好。通过进化,原型可溶性凝集素获得跨膜区域和信号基序成为c型凝集素受体(clr)。虽然clr似乎与自身具有一定的内在亲和力,但一些clr适应于有效识别病原体中存在的糖缀合物作为病原体相关分子模式(pathogen associated molecular patterns, PAMPs)和改变的自我。clr进一步扩展了其多样性,以识别包括病原体和自源分子在内的非糖基化靶标。因此,clr似乎已经发展到通过感知各种“不熟悉”的目标来监测内部/外部压力以维持体内平衡。在这篇综述中,我们将总结近年来我们对clr及其配体和功能的认识,并讨论未来的展望。
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引用次数: 0
RNA methylation in immune cells. 免疫细胞中的RNA甲基化。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.1016/bs.ai.2022.08.002
Yunzhu Chen, Min-Hee Oh, Richard Flavell, Hua-Bing Li
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引用次数: 3
Recent advances in the activation and regulation of the cGAS-STING pathway. cGAS-STING通路的激活与调控研究进展。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.1016/bs.ai.2022.09.003
Run Fang, Qifei Jiang, Xiaoyu Yu, Zhen Zhao, Zhengfan Jiang

The cGAS-STING pathway is responsible for cytoplasmic double-stranded DNA (dsDNA) -triggered innate immunity and involved in the pathology of various diseases including infection, autoimmune diseases, neurodegeneration and cancer. Understanding the activation and regulatory mechanisms of this pathway is critical to develop therapeutic strategies toward these diseases. Here, we review the signal transduction, cellular functions and regulations of cGAS and STING, particularly highlighting the latest understandings on the activation of cGAS by dsDNA and/or Manganese (Mn2+), STING trafficking, sulfated glycosaminoglycans (sGAGs)-induced STING polymerization and activation, and also regulation of the cGAS-STING pathway by different biocondensates formed via phase separation of proteins from host cells and viruses.

cGAS-STING通路负责细胞质双链DNA (dsDNA)触发的先天免疫,并参与多种疾病的病理,包括感染、自身免疫性疾病、神经退行性疾病和癌症。了解这一通路的激活和调控机制对于制定针对这些疾病的治疗策略至关重要。本文综述了cGAS和STING的信号转导、细胞功能和调控,重点介绍了dsDNA和/或锰(Mn2+)激活cGAS、STING转运、硫代糖胺聚糖(sGAGs)诱导的STING聚合和激活以及宿主细胞和病毒中蛋白质相分离形成的不同生物凝聚物对cGAS-STING通路的调控等方面的最新认识。
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引用次数: 4
Becoming aware of γδ T cells. 开始意识到γδ T细胞。
3区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.1016/bs.ai.2021.12.002
Willi K Born, Rebecca L O'Brien

The discovery that B cells and αβ T cells exist was predictable: These cells gave themselves away through their products and biological effects. In contrast, there was no reason to anticipate the existence of γδ T cells. Even the accidental discovery of a novel TCR-like gene (later named γ) that did not encode TCR α or β proteins did not immediately change this. TCR-like γ had no obvious function, and its early expression in the thymus encouraged speculation about a possible role in αβ T cell development. However, the identification of human PBL-derived cell-lines which expressed CD3 in complex with the TCR-like γ protein, but not the αβ TCR, first indicated that a second T cell-type might exist, and the TCR-like γ chain was observed to co-precipitate with another protein. Amid speculation about a possible second TCR, this potential dimeric partner was named δ. To determine if the δ protein was indeed TCR-like, we undertook to sequence it. Meanwhile, a fourth TCR-like gene was discovered and provisionally named x. TCR-like x had revealed itself through genomic rearrangements early in T cell development, and was an attractive candidate for the gene encoding δ. The observation that δ protein sequences matched the predicted amino acid sequences encoded by the x gene, as well as serological cross-reactivity, confirmed that the TCR-like x gene indeed encoded the δ protein. Thus, the γδ heterodimer was established as a second TCR, and the cells that express it (the γδ T cells) consequently represented a third lymphocyte-population with the potential of recognizing diverse antigens. Soon, it became clear that γδ T cells are widely distributed and conserved among the vertebrate species, implying biological importance. Consistently, early functional studies revealed their roles in host resistance to pathogens, tissue repair, immune regulation, metabolism, organ physiology and more. Albeit discovered late, γδ T cells have repeatedly proven to play a distinct and often critical immunological role, and now generate much interest.

B细胞和αβ T细胞存在的发现是可以预见的:这些细胞通过它们的产物和生物效应出卖了自己。相比之下,没有理由预测γδ T细胞的存在。即使偶然发现了一种不编码TCR α或β蛋白的新型TCR样基因(后来被命名为γ),也没有立即改变这一点。TCR-like γ没有明显的功能,其在胸腺中的早期表达促使人们猜测其可能在αβ T细胞发育中起作用。然而,鉴定人类pbl衍生的细胞系表达CD3与TCR样γ蛋白复合物,而不表达αβ TCR,首次表明可能存在第二种T细胞类型,并且观察到TCR样γ链与另一种蛋白共沉淀。在对可能的第二个TCR的猜测中,这个潜在的二聚体伙伴被命名为δ。为了确定δ蛋白是否确实是tcr样蛋白,我们对其进行了测序。同时,第四个tcr样基因被发现,暂时命名为x。tcr样x在T细胞发育早期通过基因组重排发现,是编码δ基因的有吸引力的候选者。观察到δ蛋白序列与预测的x基因编码的氨基酸序列相匹配,以及血清学交叉反应性,证实了tcr样x基因确实编码了δ蛋白。因此,γδ异源二聚体被确定为第二种TCR,表达它的细胞(γδ T细胞)因此代表了具有识别多种抗原潜力的第三种淋巴细胞群。很快,人们发现γδ T细胞在脊椎动物物种中广泛分布并保守,这意味着其生物学重要性。与此一致,早期的功能研究揭示了它们在宿主抵抗病原体、组织修复、免疫调节、代谢、器官生理等方面的作用。尽管发现较晚,但γδ T细胞已多次被证明发挥着独特且通常至关重要的免疫作用,现在引起了广泛的兴趣。
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引用次数: 0
Antibody dependent enhancement: Unavoidable problems in vaccine development. 抗体依赖性增强:疫苗开发中不可避免的问题。
3区 医学 Q2 Medicine Pub Date : 2021-01-01 DOI: 10.1016/bs.ai.2021.08.003
Lele Xu, Zhiqian Ma, Yang Li, Zhaoxia Pang, Shuqi Xiao

In some cases, antibodies can enhance virus entry and replication in cells. This phenomenon is called antibody-dependent infection enhancement (ADE). ADE not only promotes the virus to be recognized by the target cell and enters the target cell, but also affects the signal transmission in the target cell. Early formalin-inactivated virus vaccines such as aluminum adjuvants (RSV and measles) have been shown to induce ADE. Although there is no direct evidence that there is ADE in COVID-19, this potential risk is a huge challenge for prevention and vaccine development. This article focuses on the virus-induced ADE phenomenon and its molecular mechanism. It also summarizes various attempts in vaccine research and development to eliminate the ADE phenomenon, and proposes to avoid ADE in vaccine development from the perspective of antigens and adjuvants.

在某些情况下,抗体可以增强病毒在细胞中的进入和复制。这种现象称为抗体依赖性感染增强(ADE)。ADE不仅促进病毒被靶细胞识别并进入靶细胞,而且影响靶细胞内的信号传递。早期福尔马林灭活病毒疫苗,如铝佐剂(RSV和麻疹)已被证明可诱导ADE。虽然没有直接证据表明COVID-19存在ADE,但这种潜在风险对预防和疫苗开发构成了巨大挑战。本文就病毒诱导的ADE现象及其分子机制作一综述。总结了疫苗研发中消除ADE现象的各种尝试,并从抗原和佐剂的角度提出了在疫苗开发中避免ADE的方法。
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引用次数: 27
期刊
Advances in Immunology
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