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Detection methods for SARS-CoV-2 in tissue. 组织中SARS-CoV-2检测方法。
4区 医学 Q3 Medicine Pub Date : 2021-11-01 DOI: 10.1007/s00292-021-00920-1
Saskia von Stillfried, Peter Boor

Background: Analyses for the presence of SARS-CoV‑2 in the tissues of COVID-19 patients is important in order to improve our understanding of the disease pathophysiology for interpretation of diagnostic histopathological findings in autopsies, biopsies, or surgical specimens and to assess the potential for occupational infectious hazard.

Material and methods: In this review we identified 136 published studies in PubMed's curated literature database LitCovid on SARS-CoV‑2 detection methods in tissues and evaluated them regarding sources of error, specificity, and sensitivity of the methods, taking into account our own experience.

Results: Currently, no sufficiently specific histomorphological alterations or diagnostic features for COVID-19 are known. Therefore, three approaches for SARS-CoV‑2 detection are used: RNA, proteins/antigens, or morphological detection by electron microscopy. In the preanalytical phase, the dominant source of error is tissue quality, especially the different intervals between sample collection and processing or fixation (and its duration) and specifically the interval between death and sample collection in autopsies. However, this information is found in less than half of the studies (e.g., in only 42% of autopsy studies). Our own experience and first studies prove the significantly higher sensitivity and specificity of RNA-based detection methods compared to antigen or protein detection by immunohistochemistry or immunofluorescence. Detection by electron microscopy is time consuming and difficult to interpret.

Conclusions: Different methods are available for the detection of SARS-CoV‑2 in tissue. Currently, RNA detection by RT-PCR is the method of choice. However, extensive validation studies and method harmonization are not available and are absolutely necessary.

背景:分析COVID-19患者组织中SARS-CoV‑2的存在对于提高我们对疾病病理生理学的理解,解释尸检、活检或手术标本中的诊断组织病理学结果,以及评估潜在的职业感染危害具有重要意义。材料和方法:在本综述中,我们在PubMed的精选文献数据库LitCovid中确定了136篇已发表的关于组织中SARS-CoV‑2检测方法的研究,并考虑到我们自己的经验,对这些方法的误差来源、特异性和敏感性进行了评估。结果:目前,没有足够特异性的组织形态学改变或COVID-19的诊断特征。因此,使用了三种检测SARS-CoV‑2的方法:RNA、蛋白质/抗原或电子显微镜形态学检测。在分析前阶段,误差的主要来源是组织质量,特别是样本收集和处理或固定之间的不同间隔(及其持续时间),特别是尸体解剖中死亡和样本收集之间的间隔。然而,在不到一半的研究中发现了这一信息(例如,只有42%的尸检研究发现了这一信息)。我们自己的经验和初步研究证明,与免疫组织化学或免疫荧光检测抗原或蛋白质相比,基于rna的检测方法的灵敏度和特异性明显更高。用电子显微镜检测既费时又难以解释。结论:组织中SARS-CoV‑2的检测方法多种多样。目前,RT-PCR检测RNA是首选的方法。然而,广泛的验证研究和方法统一是不可用的,这是绝对必要的。
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引用次数: 11
[BRAF-V600E testing in metastatic colorectal cancer and new, chemotherapy-free therapy options. German version]. BRAF-V600E检测在转移性结直肠癌和新的无化疗治疗方案中的应用。德国版)。
4区 医学 Q3 Medicine Pub Date : 2021-11-01 DOI: 10.1007/s00292-021-00942-9
Michael Hummel, Susanna Hegewisch-Becker, Jens Neumann, Arndt Vogel

In the past 25 years, treatment of metastatic colorectal cancer (mCRC) has undergone profound changes. The approval of newer chemotherapeutics such as irinotecan and oxaliplatin was followed in 2005 by the first targeted therapies, for example, monoclonal antibodies directed against the epidermal growth factor receptor (EGFR), as cetuximab and panitumumab, or the angiogenesis inhibitors bevacizumab, ramucirumab, and aflibercept. With the rapidly progressing molecular characterization of mCRC in the last 10 years and the classification of the disease in four consensus subtypes, further changes are emerging, which will promote, among other things, the introduction of protein-kinase inhibitors developed for specific molecular aberrations as well as immune checkpoint inhibitors into the treatment algorithm.Thorough molecular pathologic testing is indispensable today for guideline-compliant treatment of mCRC patients. In addition to RAS testing as a precondition for the therapy decision with regard to cetuximab and panitumumab, BRAF testing is of considerable relevance to allow decision making with regard to the newly approved chemotherapy-free combination of the BRAF inhibitor encorafenib and cetuximab in cases where a BRAF-V600E mutation is detected. Additional diagnostic tests should also include genome instability (microsatellite instability). Overall, more and more molecular alterations need to be investigated simultaneously, so that the use of focused next-generation sequencing is increasingly recommended.This overview describes the prognostic relevance of BRAF testing in the context of molecular pathologic diagnostics of mCRC, presents new treatment options for BRAF-mutated mCRC patients, and explains which modern DNA analytical and immunohistochemical methods are available to detect BRAF mutations in mCRC patients.

在过去的25年里,转移性结直肠癌(mCRC)的治疗发生了深刻的变化。继伊立替康和奥沙利铂等新化疗药物获批之后,2005年又出现了第一批靶向治疗药物,例如针对表皮生长因子受体(EGFR)的单克隆抗体,如西妥昔单抗和帕尼单抗,或血管生成抑制剂贝伐单抗、拉穆单抗和阿非利塞普。在过去的10年里,随着mCRC分子特征的快速发展,以及该疾病在四种共识亚型中的分类,进一步的变化正在出现,这将促进针对特定分子畸变开发的蛋白激酶抑制剂以及免疫检查点抑制剂进入治疗算法。彻底的分子病理学检测是必不可少的今天的指南符合治疗mCRC患者。除了RAS检测作为西妥昔单抗和帕尼单抗治疗决策的先决条件外,BRAF检测对于在检测到BRAF- v600e突变的情况下,允许对新批准的BRAF抑制剂encorafenib和西妥昔单抗的无化疗组合进行决策具有相当大的相关性。额外的诊断测试还应包括基因组不稳定性(微卫星不稳定性)。总的来说,越来越多的分子改变需要同时研究,因此越来越多的人建议使用集中的下一代测序。本文概述了BRAF检测在mCRC分子病理诊断中的预后相关性,为BRAF突变的mCRC患者提供了新的治疗选择,并解释了哪些现代DNA分析和免疫组织化学方法可用于检测mCRC患者的BRAF突变。
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引用次数: 1
Erratum zu: Varianteninterpretation in dermolekularen Pathologie und Onkologie. Erratum zu: Varianteninterpret in dermolekularen Pathologie und Onkologie.
4区 医学 Q3 Medicine Pub Date : 2021-11-01 DOI: 10.1007/s00292-021-01002-y
Peter Horak, Jonas Leichsenring, Simon Kreutzfeldt, Daniel Kazdal, Veronica Teleanu, Volker Endris, Anna-Lena Volckmar, Marcus Renner, Martina Kirchner, Christoph E Heilig, Olaf Neumann, Peter Schirmacher, Stefan Fröhling, Albrecht Stenzinger
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引用次数: 0
The Jewish oral pathologist Bernhard Gottlieb (1885-1950) and his scientific "uprooting" in the Third Reich. 犹太口腔病理学家伯恩哈德·戈特利布(1885-1950)和他在第三帝国的科学“连根拔起”。
4区 医学 Q3 Medicine Pub Date : 2021-11-01 DOI: 10.1007/s00292-020-00755-2
Karl Frederick Wilms, Dominik Groß

When Adolf Hitler annexed Austria to the German Reich in 1938, the famous Jewish oral pathologist Bernhard Gottlieb was in great distress. The Viennese university teacher immediately lost his employment and teaching authority and was forced to emigrate.While Gottlieb's exceptional scientific position in oral pathology is well documented, the complex implications of his deprivation of rights and forced emigration in the Third Reich have so far received little attention. Against this background, the present contribution poses the question of the concrete effects of this drastic event on Gottlieb's life and work.In order to clarify this question, Gottlieb's career status, his scientific success up to 1938, the concrete background of his forced emigration, as well as the further course of his life and career in the USA (his immigration country) are scrutinized. In addition, the paper analyzes the extent to which Gottlieb was able to build on his professional career after 1945 and posthumously. The work is based on a thorough analysis of Gottlieb's academic career using archival sources and a re-analysis of the relevant research literature.The study concludes that Gottlieb suffered a severe setback after his emigration. Several reasons played a role. In particular, cultural and age-related adjustment problems, difficult local conditions, and scarce financial resources hampered the seamless continuation of Gottlieb's career in the USA. Only in the last two decades have efforts been made, particularly in the environment of the University of Vienna, to bring Bernhard Gottlieb and his scientific achievements back into collective memory.

1938年,当阿道夫·希特勒将奥地利并入德意志帝国时,著名的犹太口腔病理学家伯恩哈德·戈特利布(Bernhard Gottlieb)非常痛苦。维也纳大学的教师立即失去了工作和教学权威,被迫移民。虽然戈特利布在口腔病理学方面的卓越科学地位有目无睹,但他在第三帝国被剥夺权利和被迫移民的复杂影响迄今为止很少受到关注。在这种背景下,本文提出了这一剧烈事件对戈特利布生活和工作的具体影响的问题。为了澄清这个问题,本文考察了戈特利布的职业地位、他在1938年之前的科学成就、他被迫移民的具体背景,以及他在美国(他的移民国)的生活和事业的进一步发展。此外,本文还分析了戈特利布在1945年后和死后能够在多大程度上建立他的职业生涯。这项工作是基于对戈特利布学术生涯的全面分析,利用档案资料和对相关研究文献的重新分析。研究得出结论,戈特利布在移民后遭受了严重挫折。有几个原因起了作用。特别是,文化和年龄相关的适应问题、困难的当地条件和稀缺的财政资源阻碍了戈特利布在美国的职业生涯的无缝延续。直到最近二十年,人们才做出努力,特别是在维也纳大学的环境下,使伯恩哈德·戈特利布和他的科学成就重新进入集体记忆。
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引用次数: 6
COVID-19 effects on the kidney. COVID-19对肾脏的影响。
4区 医学 Q3 Medicine Pub Date : 2021-11-01 Epub Date: 2021-03-01 DOI: 10.1007/s00292-020-00900-x
K Amann, P Boor, T Wiech, J Singh, E Vonbrunn, A Knöll, M Hermann, M Büttner-Herold, C Daniel, A Hartmann

Apart from pulmonary disease, acute kidney injury (AKI) is one of the most frequent and most severe organ complications in severe coronavirus disease 2019 (COVID-19). The SARS-CoV‑2 virus has been detected in renal tissue. Patients with chronic kidney disease (CKD) before and on dialysis and specifically renal transplant patients represent a particularly vulnerable population. The increasing number of COVID-19 infected patients with renal involvement led to an evolving interest in the analysis of its pathophysiology, morphology and modes of virus detection in the kidney. Meanwhile, there are ample data from several autopsy and kidney biopsy studies that differ in the quantity of cases as well as in their quality. While the detection of SARS-CoV‑2 RNA in the kidney leads to reproducible results, the use of electron microscopy for visualisation of the virus is difficult and currently critically discussed due to various artefacts. The exact contribution of indirect or direct effects on the kidney in COVID-19 are not yet known and are currently the focus of intensive research.

除肺部疾病外,急性肾损伤(AKI)是2019年严重冠状病毒病(COVID-19)中最常见和最严重的器官并发症之一。在肾组织中发现了SARS-CoV‑2病毒。慢性肾脏疾病(CKD)患者在透析前和透析中,特别是肾移植患者是一个特别脆弱的人群。随着肾脏受累的COVID-19感染患者数量的增加,人们对其病理生理、形态和肾脏病毒检测模式的分析越来越感兴趣。与此同时,几项尸检和肾活检研究的大量数据在病例数量和质量上都有所不同。虽然在肾脏中检测SARS-CoV‑2 RNA可获得可重复的结果,但使用电子显微镜对病毒进行可视化是困难的,由于存在各种伪像,目前正在进行激烈的讨论。COVID-19对肾脏的间接或直接影响的确切贡献尚不清楚,目前是深入研究的重点。
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引用次数: 7
[Impact of SARS-CoV-2/COVID-19 on the placenta]. [SARS-CoV-2/COVID-19对胎盘的影响]
4区 医学 Q3 Medicine Pub Date : 2021-11-01 Epub Date: 2021-06-11 DOI: 10.1007/s00292-021-00952-7
T Menter, A Tzankov, E Bruder

From the very beginning, special attention regarding severe acute respiratory syndrome-coronavirus‑2 (SARS-CoV-2) and the resulting coronavirus disease-2019 (COVID-19) has been paid to pregnant women.In this review, after a short introduction into the immunodefensive role of the placenta and viral infections in general, we describe the morphological changes of the placenta in SARS-CoV-2-infected pregnant women based on our own and other published studies, draw comparisons to the SARS epidemic, and discuss the question of vertical transmission of SARS-CoV‑2 from the mother to the neonate.The most common pathological findings of the placenta in SARS-CoV‑2 infection are signs of maternal and fetal malperfusion as well as potentially immunologically and/or thromboinflammation-mediated findings. These manifest as infarcts and decidual vasculopathy as well as thrombi in the fetal circulation and avascular villi. In some cases, there is also an inflammatory reaction with villitis, intervillositis, and fetal vasculitis. In addition, it has been shown that SARS-CoV‑2 can directly infect the placenta, so vertical transmission is possible.There is no COVID-19 specific pattern of placental alterations, although the detection of fetal thrombovasculitis, villitis, and intervillositis as well as fetal and maternal malperfusion could be best interpreted as the signature of SARS-CoV‑2 infection - considering the known pathophysiology of COVID-19 regarding other organs (inflammatory reaction and [micro]angiopathy). Detection of viral RNA in the fetal placental tissue and the umbilical cord indicates SARS-CoV‑2 vertical transmission.

从一开始,孕妇就受到了严重急性呼吸系统综合征-冠状病毒2 (SARS-CoV-2)及其引发的冠状病毒病2019 (COVID-19)的特别关注。在这篇综述中,在简要介绍了胎盘和病毒感染的免疫防御作用后,我们根据自己和其他已发表的研究描述了SARS- cov -2感染孕妇胎盘的形态学变化,并与SARS流行进行了比较,并讨论了SARS- cov -2从母亲到新生儿的垂直传播问题。在SARS-CoV‑2感染中,胎盘最常见的病理表现是母体和胎儿灌注不良的迹象,以及潜在的免疫和/或血栓炎症介导的表现。这些表现为梗死和个别血管病变,以及胎儿循环中的血栓和无血管绒毛。在某些情况下,还会出现绒毛炎、绒毛间炎和胎儿血管炎的炎症反应。此外,研究表明SARS-CoV‑2可以直接感染胎盘,因此有可能垂直传播。考虑到已知的COVID-19对其他器官(炎症反应和[微]血管病变)的病理生理学,尽管胎儿血栓血管炎、绒毛炎和绒毛间炎以及胎儿和母体灌注不良的检测可以最好地解释为SARS-CoV - 2感染的特征,但没有COVID-19特异性的胎盘改变模式。胎儿胎盘组织和脐带中的病毒RNA检测表明SARS-CoV‑2垂直传播。
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引用次数: 5
[SMARCB1(INI1)-deficient renal cell carcinoma: medullary and beyond : Evolving concepts]. [SMARCB1(INI1)缺陷肾细胞癌:髓质及其他:不断发展的概念]。
4区 医学 Q3 Medicine Pub Date : 2021-11-01 Epub Date: 2021-10-05 DOI: 10.1007/s00292-021-00985-y
Abbas Agaimy, Arndt Hartmann

During the last decades, the SWI/SNF chromatin-remodeling complex has received enormous recognition as a major player in the molecular pathogenesis of diverse neoplasms. Accordingly, SWI/SNF defects affecting different subunits of the complex became defining genetic features in the nosology of different neoplastic entities. In the kidney, loss of SMARCB1(INI1) as a major component of the SWI/SNF complex has emerged as the defining genetic marker for renal medullary carcinoma and pediatric malignant rhabdoid tumor. Diagnosis of these two rare entities is based on a set of defined demographic, clinicopathological, immunophenotypic, and genetic (SMARCB1 loss) criteria. Moreover, the sickle cell trait is considered a prerequisite for renal medullary carcinoma. Current knowledge illustrates that SMARCB1 loss is encountered in three major tumor categories in the kidney: (1) histologically defined neoplasms that are primarily driven by de novo SMARCB1 loss (renal medullary carcinoma and malignant rhabdoid tumor); (2) SMRACB1-deficient renal cell carcinoma (RCC) with variable non-specific histology ranging from collecting duct-like, papillary high-grade (papillary type 2), or medullary-like (lacking sickle cell trait), to fully undifferentiated; and (3) biphasic (dedifferentiated) RCC showing a variable SMARCB1-deficient undifferentiated component. The latter variant most frequently originates from pre-existing clear cell RCC but may rarely superimpose on papillary or chromophobe RCC. This review summarizes the major defining features of the emerging SMARCB1-deficient renal neoplasms. All SMARCB1-deficient carcinomas have a poor prognosis in common. Therefore, exact diagnosis of these tumors is a prerequisite for studies investigating new therapies.

在过去的几十年里,SWI/SNF染色质重塑复合体在多种肿瘤的分子发病机制中扮演着重要的角色,这一点已经得到了广泛的认可。因此,影响该复合体不同亚基的SWI/SNF缺陷在不同肿瘤实体的分类学中成为决定性的遗传特征。在肾脏中,SMARCB1(INI1)作为SWI/SNF复合物的主要组成部分的缺失已经成为肾髓样癌和儿童恶性横纹肌样肿瘤的决定性遗传标记。这两种罕见的实体的诊断是基于一套定义的人口统计学,临床病理,免疫表型和遗传(SMARCB1丢失)标准。此外,镰状细胞特征被认为是肾髓质癌的先决条件。目前的知识表明,SMARCB1的丢失主要发生在三种主要的肾脏肿瘤中:(1)组织学上确定的主要由新生SMARCB1丢失驱动的肿瘤(肾髓样癌和恶性横纹肌样瘤);(2) smracb1缺陷型肾细胞癌(RCC)具有可变的非特异性组织学,从收集管状,乳头状高级别(乳头状2型)或髓样(缺乏镰状细胞特征)到完全未分化;(3)双相(去分化)RCC显示可变的缺乏smarcb1的未分化成分。后一种变异最常起源于已有的透明细胞RCC,但可能很少叠加在乳头状或憎色细胞RCC上。本文综述了新出现的smarcb1缺陷肾肿瘤的主要特征。所有smarcb1缺陷癌都有一个共同的不良预后。因此,准确诊断这些肿瘤是研究新疗法的先决条件。
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引用次数: 1
[Pathology and modernity: a look back at Rudolf Virchow on the occasion of his 200th birthday]. [病理学与现代性:回顾鲁道夫·维尔肖的200岁生日]。
4区 医学 Q3 Medicine Pub Date : 2021-11-01 Epub Date: 2021-10-07 DOI: 10.1007/s00292-021-01005-9
Constantin Goschler
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引用次数: 0
Mitteilungen der IAP. 来自国际原子能机构的消息
4区 医学 Q3 Medicine Pub Date : 2021-11-01 DOI: 10.1007/s00292-021-01001-z
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引用次数: 0
The pathologist and "short-term rector" Albert Dietrich (1873-1961) and his ambivalent relationship with the Nazi regime : Not Nazi enough? 病理学家和“短期医生”阿尔伯特·迪特里希(1873-1961)和他与纳粹政权的矛盾关系:不够纳粹?
4区 医学 Q3 Medicine Pub Date : 2021-11-01 DOI: 10.1007/s00292-019-00726-2
Christina Gräf, Dominik Groß

Throughout his professional life, the pathologist Albert Dietrich devoted himself to researching and combating cancer. Due to his considerable reputation and success, he was one of the first doctors to be awarded the Paracelsus Medal for his scientific services in 1952.However, Dietrich's role in the Third Reich was - and still is - far less defined. In May 1933, he became rector of the Eberhard Karls University in Tübingen, which at that time was one of the most Nazi-oriented universities. However, his term of office was short - by the end of 1933 he had already been replaced by the protestant theologian Karl Fezer.This article sheds light on Dietrich's ambivalent relationship to National Socialism and analyzes and discusses the background to his dismissal, his later (also politically influenced) emeritus status (1938/39), and his entry into the NSDAP, which took place at retirement age (1941). The study is based on archival sources partly evaluated for the first time and on a reanalysis of the relevant research literature.The study shows that Dietrich was targeted by individual Nazi decision-makers primarily because he advocated a supposedly "liberalist" university policy. Dietrich thus ultimately stands for a type of university lecturer who renounced a decidedly Nazi stance in public without, however, placing himself in a critical relationship to Nazi ideology. Against this background, statements from the postwar period that saw him retrospectively near Nazi opposition are to be classified as the formation of legends.

病理学家阿尔伯特·迪特里希(Albert Dietrich)在他的职业生涯中一直致力于研究和对抗癌症。由于他相当大的声誉和成功,他是1952年第一批被授予巴拉塞尔士奖章的医生之一,以表彰他的科学服务。然而,迪特里希在第三帝国的角色远没有那么明确,现在也是如此。1933年5月,他成为宾根市埃伯哈德·卡尔斯大学的校长,这所大学当时是最具纳粹倾向的大学之一。然而,他的任期很短——到1933年底,他已经被新教神学家卡尔·费泽(Karl Fezer)取代。本文揭示了迪特里希与国家社会主义的矛盾关系,并分析和讨论了他被解雇的背景,他后来(也受到政治影响)的退休身份(1938/39年),以及他在退休年龄(1941年)加入纳粹党。本研究以档案资料为基础,首次对部分资料进行评估,并对相关研究文献进行重新分析。研究表明,迪特里希成为纳粹个别决策者的目标,主要是因为他提倡所谓的“自由主义”大学政策。因此,迪特里希最终代表了一种大学讲师,他在公开场合放弃了坚定的纳粹立场,但却没有将自己置于与纳粹意识形态的关键关系中。在这样的背景下,他在战后时期对纳粹的反对被归类为传奇的形成。
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引用次数: 0
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Pathologe
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