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Grammotoxin increases its toxic behavior. 革兰氏毒素会增加其毒性。
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-09-25 DOI: 10.1085/jgp.202413665
Ben Short

This JGP study (Collaço et al. https://doi.org/10.1085/jgp.202413563) reveals that in addition to voltage-gated Ca2+ and K+ channels, ω-grammotoxin-SIA also inhibits voltage-gated Na+ channel currents.

这项 JGP 研究(Collaço 等人,https://doi.org/10.1085/jgp.202413563)显示,除了电压门控的 Ca2+ 和 K+ 通道外,ω-grammotoxin-SIA 还能抑制电压门控的 Na+ 通道电流。
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引用次数: 0
Fluorescence labeling strategies for cell surface expression of TRPV1. 细胞表面表达 TRPV1 的荧光标记策略。
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-08-20 DOI: 10.1085/jgp.202313523
Taylor M Mott, Grace C Wulffraat, Alex J Eddins, Ryan A Mehl, Eric N Senning

Regulation of ion channel expression on the plasma membrane is a major determinant of neuronal excitability, and identifying the underlying mechanisms of this expression is critical to our understanding of neurons. Here, we present two orthogonal strategies to label extracellular sites of the ion channel TRPV1 that minimally perturb its function. We use the amber codon suppression technique to introduce a non-canonical amino acid (ncAA) with tetrazine click chemistry, compatible with a trans-cyclooctene coupled fluorescent dye. Additionally, by inserting the circularly permutated HaloTag (cpHaloTag) in an extracellular loop of TRPV1, we can incorporate a fluorescent dye of our choosing. Optimization of ncAA insertion sites was accomplished by screening residue positions between the S1 and S2 transmembrane domains with elevated missense variants in the human population. We identified T468 as a rapid labeling site (∼5 min) based on functional and biochemical assays in HEK293T/17 cells. Through adapting linker lengths and backbone placement of cpHaloTag on the extracellular side of TRPV1, we generated a fully functional channel construct, TRPV1exCellHalo, with intact wild-type gating properties. We used TRPV1exCellHalo in a single molecule experiment to track TRPV1 on the cell surface and validate studies that show decreased mobility of the channel upon activation. The application of these extracellular label TRPV1 (exCellTRPV1) constructs to track surface localization of the channel will shed significant light on the mechanisms regulating its expression and provide a general scheme to introduce similar modifications to other cell surface receptors.

质膜上离子通道表达的调控是神经元兴奋性的主要决定因素,而确定这种表达的内在机制对于我们了解神经元至关重要。在这里,我们提出了两种正交策略来标记离子通道 TRPV1 的胞外位点,以最小程度地干扰其功能。我们使用琥珀色密码子抑制技术,通过四嗪点击化学方法引入非典型氨基酸(ncAA),并与反式环辛烯偶联荧光染料兼容。此外,通过在 TRPV1 的细胞外环插入环状包覆的 HaloTag(cpHaloTag),我们还可以加入我们选择的荧光染料。ncAA 插入位点的优化是通过筛选 S1 和 S2 跨膜结构域之间的残基位置来实现的。根据在 HEK293T/17 细胞中进行的功能和生化试验,我们确定 T468 为快速标记位点(∼5 分钟)。通过调整链接长度和 cpHaloTag 在 TRPV1 细胞外侧的骨架位置,我们生成了一个具有完整野生型门控特性的全功能通道构建体 TRPV1exCellHalo。我们在单分子实验中使用了 TRPV1exCellHalo 来追踪细胞表面的 TRPV1,并验证了激活后通道流动性降低的研究结果。应用这些细胞外标记 TRPV1(exCellTRPV1)构建体来追踪通道的表面定位,将对其表达的调控机制产生重要启示,并为其他细胞表面受体引入类似修饰提供了通用方案。
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引用次数: 0
Rad protein: An essential player in L-type Ca2+ channel localization and modulation in cardiomyocytes. Rad 蛋白:心肌细胞中 L 型 Ca2+ 通道定位和调节的重要参与者。
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-08-22 DOI: 10.1085/jgp.202413629
Cherrie H T Kong, Eef Dries
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引用次数: 0
Ion channels of cold transduction and transmission. 冷传导和传输的离子通道。
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-07-25 DOI: 10.1085/jgp.202313529
Cheyanne M Lewis, Theanne N Griffith

Thermosensation requires the activation of a unique collection of ion channels and receptors that work in concert to transmit thermal information. It is widely accepted that transient receptor potential melastatin 8 (TRPM8) activation is required for normal cold sensing; however, recent studies have illuminated major roles for other ion channels in this important somatic sensation. In addition to TRPM8, other TRP channels have been reported to contribute to cold transduction mechanisms in diverse sensory neuron populations, with both leak- and voltage-gated channels being identified for their role in the transmission of cold signals. Whether the same channels that contribute to physiological cold sensing also mediate noxious cold signaling remains unclear; however, recent work has found a conserved role for the kainite receptor, GluK2, in noxious cold sensing across species. Additionally, cold-sensing neurons likely engage in functional crosstalk with nociceptors to give rise to cold pain. This Review will provide an update on our understanding of the relationship between various ion channels in the transduction and transmission of cold and highlight areas where further investigation is required.

热感觉需要激活一系列独特的离子通道和受体,它们协同工作以传递热信息。人们普遍认为,正常的冷感觉需要瞬时受体电位美司他丁 8(TRPM8)的激活;然而,最近的研究揭示了其他离子通道在这种重要的躯体感觉中的主要作用。据报道,除了 TRPM8 之外,其他 TRP 通道也有助于不同感觉神经元群中的冷传导机制,泄漏和电压门控通道在冷信号传输中的作用均已得到确认。然而,最近的研究发现,kainite 受体 GluK2 在不同物种的严寒感知中扮演着一致的角色。此外,冷感神经元很可能与痛觉感受器发生功能性串扰,从而引起冷痛。本综述将介绍我们对各种离子通道在冷的传导和传输中的关系的最新理解,并强调需要进一步研究的领域。
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引用次数: 0
Novel cardiac myosin inhibitor for hypertrophic cardiomyopathy. 治疗肥厚型心肌病的新型心肌酶抑制剂。
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-08-12 DOI: 10.1085/jgp.202413640
Danuta Szczesna-Cordary
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引用次数: 0
Mechanisms of a novel regulatory light chain-dependent cardiac myosin inhibitor. 新型调节轻链依赖性心肌肌球蛋白抑制剂的作用机制
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-07-31 DOI: 10.1085/jgp.202313503
Kristina Kooiker, Qing-Fen Gan, Ming Yu, Na Sa, Saffie Mohran, Yuanhua Cheng, Galina Flint, Stephanie Neys, Chengqian Gao, Devin Nissen, Tim McMillen, Anthony Asencio, Weikang Ma, Thomas C Irving, Farid Moussavi-Harami, Michael Regnier

Hypertrophic cardiomyopathy (HCM) is a genetic disease of the heart characterized by thickening of the left ventricle (LV), hypercontractility, and impaired relaxation. HCM is caused primarily by heritable mutations in sarcomeric proteins, such as β myosin heavy chain. Until recently, medications in clinical use for HCM did not directly target the underlying contractile changes in the sarcomere. Here, we investigate a novel small molecule, RLC-1, identified in a bovine cardiac myofibril high-throughput screen. RLC-1 is highly dependent on the presence of a regulatory light chain to bind to cardiac myosin and modulate its ATPase activity. In demembranated rat LV trabeculae, RLC-1 decreased maximal Ca2+-activated force and Ca2+ sensitivity of force, while it increased the submaximal rate constant for tension redevelopment. In myofibrils isolated from rat LV, both maximal and submaximal Ca2+-activated force are reduced by nearly 50%. Additionally, the fast and slow phases of relaxation were approximately twice as fast as DMSO controls, and the duration of the slow phase was shorter. Structurally, x-ray diffraction studies showed that RLC-1 moved myosin heads away from the thick filament backbone and decreased the order of myosin heads, which is different from other myosin inhibitors. In intact trabeculae and isolated cardiomyocytes, RLC-1 treatment resulted in decreased peak twitch magnitude and faster activation and relaxation kinetics. In conclusion, RLC-1 accelerated kinetics and decreased force production in the demembranated tissue, intact tissue, and intact whole cells, resulting in a smaller cardiac twitch, which could improve the underlying contractile changes associated with HCM.

肥厚型心肌病(HCM)是一种遗传性心脏疾病,以左心室(LV)增厚、收缩力亢进和松弛功能受损为特征。HCM 主要是由β肌球蛋白重链等肉瘤蛋白的遗传性突变引起的。直到最近,临床上用于治疗 HCM 的药物还没有直接针对肌节中潜在的收缩变化。在此,我们研究了在牛心肌肌原纤维高通量筛选中发现的一种新型小分子 RLC-1。RLC-1 与心肌肌球蛋白结合并调节其 ATPase 活性高度依赖于调节轻链的存在。在去膜的大鼠左心室小梁中,RLC-1降低了最大钙离子激活力和钙离子激活力的敏感性,同时增加了张力再发展的次最大速率常数。在从大鼠左心室分离的肌原纤维中,最大和次最大 Ca2+ 激活力都降低了近 50%。此外,松弛的快速和慢速阶段的速度约为 DMSO 对照组的两倍,而慢速阶段的持续时间较短。从结构上看,X 射线衍射研究表明,RLC-1 使肌球蛋白头远离粗丝骨架,并降低了肌球蛋白头的顺序,这与其他肌球蛋白抑制剂不同。在完整的小梁和离体心肌细胞中,RLC-1 会导致峰值抽动幅度降低,激活和松弛动力学速度加快。总之,RLC-1 加快了去膜组织、完整组织和完整全细胞的动力学速度并降低了产力,从而使心脏抽搐幅度变小,这可能会改善与 HCM 相关的潜在收缩变化。
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引用次数: 0
ω-Grammotoxin-SIA inhibits voltage-gated Na+ channel currents. ω-Grammotoxin-SIA抑制电压门控Na+通道电流
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-07-23 DOI: 10.1085/jgp.202413563
Rita de Cássia Collaço, Filip Van Petegem, Frank Bosmans

ω-Grammotoxin-SIA (GrTX-SIA) was originally isolated from the venom of the Chilean rose tarantula and demonstrated to function as a gating modifier of voltage-gated Ca2+ (CaV) channels. Later experiments revealed that GrTX-SIA could also inhibit voltage-gated K+ (KV) channel currents via a similar mechanism of action that involved binding to a conserved S3-S4 region in the voltage-sensing domains (VSDs). Since voltage-gated Na+ (NaV) channels contain homologous structural motifs, we hypothesized that GrTX-SIA could inhibit members of this ion channel family as well. Here, we show that GrTX-SIA can indeed impede the gating process of multiple NaV channel subtypes with NaV1.6 being the most susceptible target. Moreover, molecular docking of GrTX-SIA onto NaV1.6, supported by a p.E1607K mutation, revealed the voltage sensor in domain IV (VSDIV) as being a primary site of action. The biphasic manner in which current inhibition appeared to occur suggested a second, possibly lower-sensitivity binding locus, which was identified as VSDII by using KV2.1/NaV1.6 chimeric voltage-sensor constructs. Subsequently, the NaV1.6p.E782K/p.E838K (VSDII), NaV1.6p.E1607K (VSDIV), and particularly the combined VSDII/VSDIV mutant lost virtually all susceptibility to GrTX-SIA. Together with existing literature, our data suggest that GrTX-SIA recognizes modules in NaV channel VSDs that are conserved among ion channel families, thereby allowing it to act as a comprehensive ion channel gating modifier peptide.

ω-Grammotoxin-SIA(GrTX-SIA)最初是从智利玫瑰狼蛛的毒液中分离出来的,并被证明可作为电压门控 Ca2+ (CaV)通道的门控调节剂。后来的实验发现,GrTX-SIA 还能通过类似的作用机制抑制电压门控 K+(KV)通道电流,该机制涉及与电压感应结构域(VSDs)中保守的 S3-S4 区域结合。由于电压门控 Na+ (NaV) 通道含有同源的结构基团,我们假设 GrTX-SIA 也能抑制该离子通道家族的成员。在这里,我们发现 GrTX-SIA 确实能阻碍多种 NaV 通道亚型的门控过程,其中 NaV1.6 是最易受影响的靶点。此外,在 p.E1607K 突变的支持下,GrTX-SIA 与 NaV1.6 的分子对接显示,结构域 IV 中的电压传感器(VSDIV)是主要的作用位点。电流抑制出现的双相方式表明,可能存在第二个灵敏度较低的结合位点,通过使用 KV2.1/NaV1.6 嵌合电压传感器构建体,将其确定为 VSDII。随后,NaV1.6p.E782K/p.E838K (VSDII)、NaV1.6p.E1607K (VSDIV),特别是 VSDII/VSDIV 组合突变体几乎完全丧失了对 GrTX-SIA 的敏感性。结合现有文献,我们的数据表明,GrTX-SIA 可识别 NaV 通道 VSD 中的模块,这些模块在离子通道家族中是保守的,因此它可以作为一种全面的离子通道门控修饰肽发挥作用。
{"title":"ω-Grammotoxin-SIA inhibits voltage-gated Na+ channel currents.","authors":"Rita de Cássia Collaço, Filip Van Petegem, Frank Bosmans","doi":"10.1085/jgp.202413563","DOIUrl":"10.1085/jgp.202413563","url":null,"abstract":"<p><p>ω-Grammotoxin-SIA (GrTX-SIA) was originally isolated from the venom of the Chilean rose tarantula and demonstrated to function as a gating modifier of voltage-gated Ca2+ (CaV) channels. Later experiments revealed that GrTX-SIA could also inhibit voltage-gated K+ (KV) channel currents via a similar mechanism of action that involved binding to a conserved S3-S4 region in the voltage-sensing domains (VSDs). Since voltage-gated Na+ (NaV) channels contain homologous structural motifs, we hypothesized that GrTX-SIA could inhibit members of this ion channel family as well. Here, we show that GrTX-SIA can indeed impede the gating process of multiple NaV channel subtypes with NaV1.6 being the most susceptible target. Moreover, molecular docking of GrTX-SIA onto NaV1.6, supported by a p.E1607K mutation, revealed the voltage sensor in domain IV (VSDIV) as being a primary site of action. The biphasic manner in which current inhibition appeared to occur suggested a second, possibly lower-sensitivity binding locus, which was identified as VSDII by using KV2.1/NaV1.6 chimeric voltage-sensor constructs. Subsequently, the NaV1.6p.E782K/p.E838K (VSDII), NaV1.6p.E1607K (VSDIV), and particularly the combined VSDII/VSDIV mutant lost virtually all susceptibility to GrTX-SIA. Together with existing literature, our data suggest that GrTX-SIA recognizes modules in NaV channel VSDs that are conserved among ion channel families, thereby allowing it to act as a comprehensive ion channel gating modifier peptide.</p>","PeriodicalId":54828,"journal":{"name":"Journal of General Physiology","volume":"156 10","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11270453/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141749788","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Using neural networks for image analysis in general physiology. 利用神经网络进行普通生理学图像分析。
IF 3.8 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-09-17 DOI: 10.1085/jgp.202413623
Eduardo Rios
An article with three goals, namely, to (1) provide the set of ideas and information needed to understand, at a basic level, the application of convolutional neural networks (CNNs) to analyze images in biology; (2) trace a path to adopting and adapting, at code level, the applications of machine learning (ML) that are freely available and potentially applicable in biology research; (3) by using as examples the networks described in the recent article by Ríos et al. (2024. https://doi.org/10.1085/jgp.202413595), add logic and clarity to their description.
这篇文章有三个目标,即:(1) 提供一套所需的观点和信息,以便从根本上理解卷积神经网络 (CNN) 在生物学图像分析中的应用;(2) 在代码层面上追溯采用和调整机器学习 (ML) 应用的路径,这些应用可免费获得,并可能适用于生物学研究;(3) 以里奥斯等人最近发表的文章 (2024. https://doi.org/10.1085/jgp.202413595) 中描述的网络为例,增加其描述的逻辑性和清晰度。
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引用次数: 0
Artificial intelligence approaches to the volumetric quantification of glycogen granules in EM images of human tissue. 用人工智能方法对人体组织电磁图像中的糖原颗粒进行体积量化。
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-09-02 Epub Date: 2024-07-09 DOI: 10.1085/jgp.202413595
Eduardo Ríos, Montserrat Samsó, Lourdes C Figueroa, Carlo Manno, Eshwar R Tammineni, Lucas Rios Giordano, Sheila Riazi

Skeletal muscle, the major processor of dietary glucose, stores it in myriad glycogen granules. Their numbers vary with cellular location and physiological and pathophysiological states. AI models were developed to derive granular glycogen content from electron-microscopic images of human muscle. Two UNet-type semantic segmentation models were built: "Locations" classified pixels as belonging to different regions in the cell; "Granules" identified pixels within granules. From their joint output, a pixel fraction pf was calculated for images from patients positive (MHS) or negative (MHN) to a test for malignant hyperthermia susceptibility. pf was used to derive vf, the volume fraction occupied by granules. The relationship vf (pf) was derived from a simulation of volumes ("baskets") containing virtual granules at realistic concentrations. The simulated granules had diameters matching the real ones, which were measured by adapting a utility devised for calcium sparks. Applying this relationship to the pf measured in images, vf was calculated for every region and patient, and from them a glycogen concentration. The intermyofibrillar spaces and the sarcomeric I band had the highest granular content. The measured glycogen concentration was low enough to allow for a substantial presence of non-granular glycogen. The MHS samples had an approximately threefold lower concentration (significant in a hierarchical test), consistent with earlier evidence of diminished glucose processing in MHS. The AI models and the approach to infer three-dimensional magnitudes from two-dimensional images should be adaptable to other tasks on a variety of images from patients and animal models and different disease conditions.

骨骼肌是膳食葡萄糖的主要处理者,它将葡萄糖储存在无数的糖原颗粒中。它们的数量随细胞位置、生理和病理生理状态而变化。我们开发了人工智能模型,以便从人体肌肉的电子显微镜图像中得出糖原颗粒的含量。建立了两个 UNet 类型的语义分割模型:"位置 "将像素划分为细胞中的不同区域;"颗粒 "识别颗粒内的像素。根据它们的联合输出,计算出恶性高热惊厥易感性测试阳性(MHS)或阴性(MHN)患者图像的像素分数 pf。vf (pf)的关系是通过模拟含有实际浓度的虚拟颗粒的体积("篮子")得出的。模拟颗粒的直径与真实颗粒的直径一致,而真实颗粒的直径是通过调整钙火花设计的实用程序测量的。将这种关系应用于图像中测量的 pf,就能计算出每个区域和患者的 vf,并从中计算出糖原浓度。肌纤维间隙和肉瘤 I 带的颗粒含量最高。测得的糖原浓度较低,足以说明存在大量非颗粒状糖原。MHS 样本中的糖原浓度大约低三倍(在分层检验中具有显著性),这与早先有证据表明 MHS 中葡萄糖处理能力减弱是一致的。人工智能模型和从二维图像推断三维大小的方法应能适用于病人、动物模型和不同疾病情况下各种图像的其他任务。
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引用次数: 0
Beyond homogenates: New tool available for estimating glycogen's numerical subcellular distribution. 超越匀浆:估算糖原亚细胞分布的新工具。
IF 3.3 2区 医学 Q1 PHYSIOLOGY Pub Date : 2024-09-02 Epub Date: 2024-07-09 DOI: 10.1085/jgp.202413607
Joachim Nielsen

This Commentary discusses the implications of a recent JGP study (Ríos et al. https://www.doi.org/10.1085/jgp.202413595) demonstrating an AI model to quantify glycogen granules.

本评论讨论了最近一项 JGP 研究(Ríos 等人,https://www.doi.org/10.1085/jgp.202413595)的意义,该研究展示了一种量化糖原颗粒的人工智能模型。
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引用次数: 0
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Journal of General Physiology
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