Pub Date : 2025-11-29DOI: 10.1186/s13620-025-00323-1
Hannah Dane, Brendan Gilbride, Minu Thomas, Irene R Grant
Accurate diagnosis of Bovine Tuberculosis (bTB) in cattle is important for success of eradication programmes, but the current reliance on the single intradermal comparative cervical tuberculin (SICCT) test is not achieving disease eradication in all jurisdictions, including Northern Ireland (NI). In this study, a novel Phagomagnetic separation (PhMS)-qPCR assay to rapidly detect viable Mycobacterium bovis in bovine blood samples was evaluated. A total of 149 heart blood samples were collected from cattle at exsanguination point of the slaughter line at a NI abattoir between June and August 2023 - 74 from TB reactor cattle (compulsorily culled within days of a positive SICCT test result) and 75 from routine slaughter cattle (< 30 months). Peripheral blood mononuclear cells (PBMCs) were isolated and lysed to release any mycobacteria present before PhMS-qPCR and culture were performed to detect presence of viable M. bovis. The DNAs obtained were subsequently tested for evidence of viable Mycobacterium avium subsp. paratuberculosis (MAP) also. PhMS-qPCR results indicate that of the TB reactor cattle with conclusive PhMS-qPCR results, 7.5% of bloods tested positive for viable M. bovis only, 41.8% for viable MAP only and 28.4% showed evidence of co-infection (both M. bovis and MAP detected). Of the routine slaughter cattle with conclusive PhMS-qPCR results, 22.4% of bloods tested positive for viable M. bovis only, 19.4% for viable MAP only and 20.9% showed evidence of co-infection. Of the blood samples with conclusive culture results, 19.6% TB reactors and 25.4% routine slaughter cattle were M. bovis culture positive. No agreement was observed between the M. bovis PhMS-qPCR assay and M. bovis culture results (Kappa - 0.028, 95% CI -0.162 to 0.105). Results of this study provide proof-of-concept that the PhMS-qPCR assay is able to detect viable M. bovis in bovine blood, although a different qPCR assay with greater detection sensitivity will need to be identified going forward. A surprisingly high number of M. bovis/MAP co-infections were detected in the blood of NI cattle, which may be contributing to failure of the bTB eradication scheme. The latter warrants further investigation.
{"title":"Evidence of mycobacteriaemias and mycobacterial co-infections uncovered in cattle at slaughter using a novel phage-based PhMS-qPCR assay for viable Mycobacterium bovis and Mycobacterium avium subsp. paratuberculosis.","authors":"Hannah Dane, Brendan Gilbride, Minu Thomas, Irene R Grant","doi":"10.1186/s13620-025-00323-1","DOIUrl":"10.1186/s13620-025-00323-1","url":null,"abstract":"<p><p>Accurate diagnosis of Bovine Tuberculosis (bTB) in cattle is important for success of eradication programmes, but the current reliance on the single intradermal comparative cervical tuberculin (SICCT) test is not achieving disease eradication in all jurisdictions, including Northern Ireland (NI). In this study, a novel Phagomagnetic separation (PhMS)-qPCR assay to rapidly detect viable Mycobacterium bovis in bovine blood samples was evaluated. A total of 149 heart blood samples were collected from cattle at exsanguination point of the slaughter line at a NI abattoir between June and August 2023 - 74 from TB reactor cattle (compulsorily culled within days of a positive SICCT test result) and 75 from routine slaughter cattle (< 30 months). Peripheral blood mononuclear cells (PBMCs) were isolated and lysed to release any mycobacteria present before PhMS-qPCR and culture were performed to detect presence of viable M. bovis. The DNAs obtained were subsequently tested for evidence of viable Mycobacterium avium subsp. paratuberculosis (MAP) also. PhMS-qPCR results indicate that of the TB reactor cattle with conclusive PhMS-qPCR results, 7.5% of bloods tested positive for viable M. bovis only, 41.8% for viable MAP only and 28.4% showed evidence of co-infection (both M. bovis and MAP detected). Of the routine slaughter cattle with conclusive PhMS-qPCR results, 22.4% of bloods tested positive for viable M. bovis only, 19.4% for viable MAP only and 20.9% showed evidence of co-infection. Of the blood samples with conclusive culture results, 19.6% TB reactors and 25.4% routine slaughter cattle were M. bovis culture positive. No agreement was observed between the M. bovis PhMS-qPCR assay and M. bovis culture results (Kappa - 0.028, 95% CI -0.162 to 0.105). Results of this study provide proof-of-concept that the PhMS-qPCR assay is able to detect viable M. bovis in bovine blood, although a different qPCR assay with greater detection sensitivity will need to be identified going forward. A surprisingly high number of M. bovis/MAP co-infections were detected in the blood of NI cattle, which may be contributing to failure of the bTB eradication scheme. The latter warrants further investigation.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":" ","pages":"2"},"PeriodicalIF":3.1,"publicationDate":"2025-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12772088/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145643143","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-26DOI: 10.1186/s13620-025-00319-x
Anna Domosławska, Anna Rapacz-Leonard, Andrzej Jurczak
{"title":"Spontaneous uterine rupture and extrauterine pregnancy in a bitch year after unsupervised parturition.","authors":"Anna Domosławska, Anna Rapacz-Leonard, Andrzej Jurczak","doi":"10.1186/s13620-025-00319-x","DOIUrl":"10.1186/s13620-025-00319-x","url":null,"abstract":"","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":" ","pages":"1"},"PeriodicalIF":3.1,"publicationDate":"2025-11-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12764055/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145643138","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-25DOI: 10.1186/s13620-025-00316-0
Lisa Buckley, Aideen Kennedy, Maresa Sheehan, Mícheál Casey, Rob Doyle, Elizabeth A Lane
Background: Since the abolition of EU milk quotas in 2015, the Irish dairy industry has expanded with a 16.6% increase in calf births since 2011. Calf losses have major implications for the economic viability and sustainability of dairy enterprises. There is a paucity of literature on mortality in calves from birth to six months, particularly at a national herd level. Previous studies have tended to focus on herd size as a risk factor for calf mortality rather than the possible influence of herd expansion. The purpose of this study is to quantify any association between dairy herd expansion and the risk of being classified as a high or low calf mortality herd based on analysis of national dairy herd identification and movement records in Ireland from 2016-2020.
Results: In calves aged under 6 months, herds that expanded > 20% (OR 1.23 95% CI: 1.10-1.37, p < 0.001) and > 45% (OR 1.22, 95% CI:1.09-1.36, p = 0.001), were more likely to have > 10% herd calf mortality, compared to herds that did not increase in size. Newly established herds were more likely to have poor mortality outcomes (OR 2.44, 95% CI: 1.82-3.29, p < 0.001) compared to herds that did not increase in size. Herd expansion < 20% was not associated with mortality outcome. Herd ordinal location and herd size were significant risk factors for > 10% herd calf mortality.
Conclusion: This study has demonstrated that herds that have expanded > 20% over five years and newly established herds were more likely to have poor mortality outcomes. It suggests that new entrants into dairy farming may benefit from targeted emphasis on herd health management. The results also highlight the value of national data as a tool to determine optimisation of farm interventions and surveillance and policy decisions to prioritise animal health and welfare.
背景:自2015年欧盟取消牛奶配额以来,爱尔兰乳制品行业已经扩大,自2011年以来小牛出生率增加了16.6%。小牛的损失对乳品企业的经济生存能力和可持续性具有重大影响。关于小牛从出生到6个月的死亡率的文献很少,特别是在国家牧群水平上。以前的研究倾向于将群体规模作为小牛死亡的风险因素,而不是群体扩张的可能影响。本研究的目的是根据2016-2020年爱尔兰全国奶牛群识别和移动记录的分析,量化奶牛群扩张与小牛死亡率高或低的风险之间的任何关联。结果:在6个月以下的小牛中,与没有增加大小的牛群相比,扩大> 20%的牛群(OR 1.23 95% CI: 1.10-1.37, p 45% (OR 1.22, 95% CI:1.09-1.36, p = 0.001)更有可能有> 10%的牛群死亡率。新建立的畜群更可能有较差的死亡率结果(OR 2.44, 95% CI: 1.82-3.29, p 10%的畜群小牛死亡率)。结论:这项研究表明,在五年内扩大了20%的畜群和新建立的畜群更有可能出现较低的死亡率。这表明,新进入奶牛养殖业的人可能会受益于有针对性地强调牛群健康管理。研究结果还强调了国家数据作为一种工具的价值,可以确定农场干预措施的优化,以及优先考虑动物健康和福利的监测和政策决定。
{"title":"A retrospective cross-sectional study of Irish national dairy calf mortality data; 2016-2020.","authors":"Lisa Buckley, Aideen Kennedy, Maresa Sheehan, Mícheál Casey, Rob Doyle, Elizabeth A Lane","doi":"10.1186/s13620-025-00316-0","DOIUrl":"10.1186/s13620-025-00316-0","url":null,"abstract":"<p><strong>Background: </strong>Since the abolition of EU milk quotas in 2015, the Irish dairy industry has expanded with a 16.6% increase in calf births since 2011. Calf losses have major implications for the economic viability and sustainability of dairy enterprises. There is a paucity of literature on mortality in calves from birth to six months, particularly at a national herd level. Previous studies have tended to focus on herd size as a risk factor for calf mortality rather than the possible influence of herd expansion. The purpose of this study is to quantify any association between dairy herd expansion and the risk of being classified as a high or low calf mortality herd based on analysis of national dairy herd identification and movement records in Ireland from 2016-2020.</p><p><strong>Results: </strong>In calves aged under 6 months, herds that expanded > 20% (OR 1.23 95% CI: 1.10-1.37, p < 0.001) and > 45% (OR 1.22, 95% CI:1.09-1.36, p = 0.001), were more likely to have > 10% herd calf mortality, compared to herds that did not increase in size. Newly established herds were more likely to have poor mortality outcomes (OR 2.44, 95% CI: 1.82-3.29, p < 0.001) compared to herds that did not increase in size. Herd expansion < 20% was not associated with mortality outcome. Herd ordinal location and herd size were significant risk factors for > 10% herd calf mortality.</p><p><strong>Conclusion: </strong>This study has demonstrated that herds that have expanded > 20% over five years and newly established herds were more likely to have poor mortality outcomes. It suggests that new entrants into dairy farming may benefit from targeted emphasis on herd health management. The results also highlight the value of national data as a tool to determine optimisation of farm interventions and surveillance and policy decisions to prioritise animal health and welfare.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"78 1","pages":"31"},"PeriodicalIF":3.1,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12648996/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145607402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-20DOI: 10.1186/s13620-025-00315-1
Miriam Casey-Bryars, Jamie A Tratalos, Jamie M Madden, Guy McGrath
{"title":"Preparation for a potential outbreak of bluetongue virus in Ireland: surveillance design to estimate local prevalence after an initial case detection.","authors":"Miriam Casey-Bryars, Jamie A Tratalos, Jamie M Madden, Guy McGrath","doi":"10.1186/s13620-025-00315-1","DOIUrl":"10.1186/s13620-025-00315-1","url":null,"abstract":"","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"78 1","pages":"30"},"PeriodicalIF":3.1,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12631999/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145565515","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-11DOI: 10.1186/s13620-025-00313-3
J W Delaney, E T Kelly, J W Angell, F P Campion
Background: Ovine lameness represents a significant production and welfare challenge to farmers and comprises two main categories, infectious and non-infectious lameness. The leading infectious lameness conditions are interdigital dermatitis (ID), footrot (FR) and contagious ovine digital dermatitis (CODD). The predominant types of non-infectious foot conditions include toe granulomas (TG) and shelly hoof (white line disease; SH). There is a paucity of information available as to how Irish farmers treat infectious foot lesions in sheep. This study aimed to i) Establish farmer-reported prevalence of lameness in Irish sheep flocks, ii) Assess farmers' ability to identify infectious and non-infectious lameness types, iii) Examine the treatment methods employed by farmers for managing and treating infectious lameness in sheep.
Results: The survey was conducted opportunistically and non-randomly. Three hundred and sixty-three valid responses were gathered. The median overall farm lameness prevalence reported was 6.0% (IQR: 4.0%-10.0%). Respondents reported ID as the most common lameness condition with a median estimated prevalence of 10.0% (IQR: 4.0 - 15.0). Respondents identified 77.9%, 76.6%, 61.7%, 67.3% and 67.0% of ID, FR, CODD, TG and SH lesions correctly, respectively. Where the respective lesion was correctly identified 95.1%, 90.2%, 49.2%, 59.7% and 68.4% reported to have seen ID, FR, CODD, TG and SH lesions, respectively on their farm previously. Antibiotic aerosol was the most frequently utilised treatment for ID (71.3% [95% CI:65.2, 76.8%]) reported by survey respondents. Antibiotic injection was reported by respondents as the most used treatment for FR (72.2% [95% CI: 65.8,78.0%]) and CODD (85.1% [95% CI: 75.8, 91.8%]). Therapeutic foot trimming was practiced by 52.9% (95% CI:46.1,59.6%) of respondents for the treatment of FR.
Conclusions: Interdigital dermatitis (ID) posed the greatest burden to Irish farmers, with a median farm prevalence of 10.0%, while footrot affected 90.2% of flocks (median 4.0%). Contagious ovine digital dermatitis, previously considered rare, was reported in 47% of flocks (median 3%). Farmers' ability to correctly identify lesions varied from 79.9% for ID to 62.4% for CODD. Therapeutic foot-trimming, remain widely used within Irish flocks and was reported by 52.9% of respondents for the treatment of FR.
{"title":"Ovine lameness in Ireland: a survey-based investigation of farmer reported prevalence, recognition, and treatment of lameness conditions.","authors":"J W Delaney, E T Kelly, J W Angell, F P Campion","doi":"10.1186/s13620-025-00313-3","DOIUrl":"10.1186/s13620-025-00313-3","url":null,"abstract":"<p><strong>Background: </strong>Ovine lameness represents a significant production and welfare challenge to farmers and comprises two main categories, infectious and non-infectious lameness. The leading infectious lameness conditions are interdigital dermatitis (ID), footrot (FR) and contagious ovine digital dermatitis (CODD). The predominant types of non-infectious foot conditions include toe granulomas (TG) and shelly hoof (white line disease; SH). There is a paucity of information available as to how Irish farmers treat infectious foot lesions in sheep. This study aimed to i) Establish farmer-reported prevalence of lameness in Irish sheep flocks, ii) Assess farmers' ability to identify infectious and non-infectious lameness types, iii) Examine the treatment methods employed by farmers for managing and treating infectious lameness in sheep.</p><p><strong>Results: </strong>The survey was conducted opportunistically and non-randomly. Three hundred and sixty-three valid responses were gathered. The median overall farm lameness prevalence reported was 6.0% (IQR: 4.0%-10.0%). Respondents reported ID as the most common lameness condition with a median estimated prevalence of 10.0% (IQR: 4.0 - 15.0). Respondents identified 77.9%, 76.6%, 61.7%, 67.3% and 67.0% of ID, FR, CODD, TG and SH lesions correctly, respectively. Where the respective lesion was correctly identified 95.1%, 90.2%, 49.2%, 59.7% and 68.4% reported to have seen ID, FR, CODD, TG and SH lesions, respectively on their farm previously. Antibiotic aerosol was the most frequently utilised treatment for ID (71.3% [95% CI:65.2, 76.8%]) reported by survey respondents. Antibiotic injection was reported by respondents as the most used treatment for FR (72.2% [95% CI: 65.8,78.0%]) and CODD (85.1% [95% CI: 75.8, 91.8%]). Therapeutic foot trimming was practiced by 52.9% (95% CI:46.1,59.6%) of respondents for the treatment of FR.</p><p><strong>Conclusions: </strong>Interdigital dermatitis (ID) posed the greatest burden to Irish farmers, with a median farm prevalence of 10.0%, while footrot affected 90.2% of flocks (median 4.0%). Contagious ovine digital dermatitis, previously considered rare, was reported in 47% of flocks (median 3%). Farmers' ability to correctly identify lesions varied from 79.9% for ID to 62.4% for CODD. Therapeutic foot-trimming, remain widely used within Irish flocks and was reported by 52.9% of respondents for the treatment of FR.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"78 1","pages":"29"},"PeriodicalIF":3.1,"publicationDate":"2025-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12607030/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145497469","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-30DOI: 10.1186/s13620-025-00311-5
Keon Kim, Tae-Hoon Shin, Sin-Wook Park, Sang-Ik Park, Yoon Jung Do, Woong-Bin Ro, Chang-Min Lee
Background: Next-generation sequencing of canine spontaneous cancer is a powerful approach in both comparative oncology and veterinary genomics. We encountered a unique case with concurrent mammary tumors. Using whole-genome sequencing (WGS), we profiled the tumor-specific landscape of somatic mutations across multiple tumor subtypes, providing unprecedented evidence within an identical genetic background.
Results: Of the seven mammary gland tumors (MGTs) isolated, two were diagnosed as benign and five as malignant. High-quality WGS (34.5X average sequencing depth, ≥ 20X coverage across 94.9% of the genome) on tumors and a blood sample revealed missense mutations in human breast cancer-related genes such as BRCA2 and TP53. Furthermore, we found evidence of canine-specific somatic mutations depending on the tumor subtypes, including HECTD4 in malignant tumors and NIPBL in epithelial-derived malignant tumors.
Conclusions: This unique case study provides novel insights into the genomic heterogeneity, clonal evolution, and subtype-specific pathogenesis of naturally occurring canine MGTs. Despite some inherent limitations and potential for individual-specific variation, our results emphasize and guide future large-scale, longitudinal studies to further elucidate the clinical and biological significance of key somatic alterations.
{"title":"Comparative genomic analysis of multiple mammary tumors from a single dog: whole-genome sequencing study.","authors":"Keon Kim, Tae-Hoon Shin, Sin-Wook Park, Sang-Ik Park, Yoon Jung Do, Woong-Bin Ro, Chang-Min Lee","doi":"10.1186/s13620-025-00311-5","DOIUrl":"10.1186/s13620-025-00311-5","url":null,"abstract":"<p><strong>Background: </strong>Next-generation sequencing of canine spontaneous cancer is a powerful approach in both comparative oncology and veterinary genomics. We encountered a unique case with concurrent mammary tumors. Using whole-genome sequencing (WGS), we profiled the tumor-specific landscape of somatic mutations across multiple tumor subtypes, providing unprecedented evidence within an identical genetic background.</p><p><strong>Results: </strong>Of the seven mammary gland tumors (MGTs) isolated, two were diagnosed as benign and five as malignant. High-quality WGS (34.5X average sequencing depth, ≥ 20X coverage across 94.9% of the genome) on tumors and a blood sample revealed missense mutations in human breast cancer-related genes such as BRCA2 and TP53. Furthermore, we found evidence of canine-specific somatic mutations depending on the tumor subtypes, including HECTD4 in malignant tumors and NIPBL in epithelial-derived malignant tumors.</p><p><strong>Conclusions: </strong>This unique case study provides novel insights into the genomic heterogeneity, clonal evolution, and subtype-specific pathogenesis of naturally occurring canine MGTs. Despite some inherent limitations and potential for individual-specific variation, our results emphasize and guide future large-scale, longitudinal studies to further elucidate the clinical and biological significance of key somatic alterations.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"78 1","pages":"27"},"PeriodicalIF":3.1,"publicationDate":"2025-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12573984/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145410858","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-30DOI: 10.1186/s13620-025-00314-2
Xiaomin Wu, Fan Lei, Yaqian Niu, Jiali Yu, Chao Chen, Te Ba, Lin Liang
Chlamydia spp. are a group of gram-negative, obligate intracellular bacteria that represent significant pathogens causing chlamydiosis in both animals and humans. Avian chlamydiosis (AC), primarily caused by Chlamydia psittaci, C. avium, C. gallinacea, and C. ibidis, has been documented in over 460 avian species. Qinghai Lake, China's largest saltwater lake and a critical overwintering site for migratory birds, served as the study area to investigate Chlamydia prevalence in wild birds. Fecal samples from 125 birds revealed an overall Chlamydia spp. infection rate of 28.8% (36/125), with three species identified: C. abortus (55.6%, 20/36), C. avium (44.4%, 16/36), and C. psittaci (13.9%, 5/36). Phylogenetic analysis through amplification of the 16 S rRNA (5 samples), IGS-23 S rRNA (6 samples), and ompA (5 samples) genes revealed that all sequences obtained in this study were assigned to the Chlamydiaceae family. The ompA sequence of C. abortus obtained in this study clustered closely with the reference strain GN6 (CP021996.1) isolated from aborted yak fetuses (Bos grunniens), a bovid species typically domesticated and endemic to the Qinghai-Tibet Plateau, showing 100% sequence identity. In contrast, C. avium ompA sequences shared 87.40% identity with the reference strain 10DC88. The identical genomic profile of C. abortus between wild birds and domesticated yaks suggests potential cross-species transmission in the Qinghai-Tibetan Plateau, where overlapping habitats of wildlife and livestock may facilitate pathogen exchange. These findings underscore the zoonotic risks posed by Chlamydia species circulating in this ecologically critical region, with implications for the health of local livestock (yaks, Tibetan sheep), human populations, and migratory bird conservation.
衣原体是一组革兰氏阴性的专性细胞内细菌,是引起动物和人类衣原体病的重要病原体。禽衣原体病(AC)主要由鹦鹉热衣原体、鸟衣原体、鸡衣原体和鹮衣原体引起,已在460多种鸟类中发现。青海湖是中国最大的咸水湖,也是候鸟的重要越冬地,以青海湖为研究区,调查了野生鸟类衣原体的流行情况。125只禽鸟粪便中衣原体感染率为28.8%(36/125),其中流产衣原体感染率为55.6%(20/36),鸟衣原体感染率为44.4%(16/36),鹦鹉衣原体感染率为13.9%(5/36)。通过16 S rRNA(5个样本)、IGS-23 S rRNA(6个样本)和ompA(5个样本)基因的扩增系统发育分析,本研究获得的所有序列均归属于衣原科。本研究获得的abortus的ompA序列与参考菌株GN6 (CP021996)聚类紧密。相比之下,C. avium ompA序列与参考菌株10DC88的同源性为87.40%。C。
{"title":"Molecular prevalence of Chlamydia spp. in wild birds from Qinghai Lake, China.","authors":"Xiaomin Wu, Fan Lei, Yaqian Niu, Jiali Yu, Chao Chen, Te Ba, Lin Liang","doi":"10.1186/s13620-025-00314-2","DOIUrl":"10.1186/s13620-025-00314-2","url":null,"abstract":"<p><p>Chlamydia spp. are a group of gram-negative, obligate intracellular bacteria that represent significant pathogens causing chlamydiosis in both animals and humans. Avian chlamydiosis (AC), primarily caused by Chlamydia psittaci, C. avium, C. gallinacea, and C. ibidis, has been documented in over 460 avian species. Qinghai Lake, China's largest saltwater lake and a critical overwintering site for migratory birds, served as the study area to investigate Chlamydia prevalence in wild birds. Fecal samples from 125 birds revealed an overall Chlamydia spp. infection rate of 28.8% (36/125), with three species identified: C. abortus (55.6%, 20/36), C. avium (44.4%, 16/36), and C. psittaci (13.9%, 5/36). Phylogenetic analysis through amplification of the 16 S rRNA (5 samples), IGS-23 S rRNA (6 samples), and ompA (5 samples) genes revealed that all sequences obtained in this study were assigned to the Chlamydiaceae family. The ompA sequence of C. abortus obtained in this study clustered closely with the reference strain GN6 (CP021996.1) isolated from aborted yak fetuses (Bos grunniens), a bovid species typically domesticated and endemic to the Qinghai-Tibet Plateau, showing 100% sequence identity. In contrast, C. avium ompA sequences shared 87.40% identity with the reference strain 10DC88. The identical genomic profile of C. abortus between wild birds and domesticated yaks suggests potential cross-species transmission in the Qinghai-Tibetan Plateau, where overlapping habitats of wildlife and livestock may facilitate pathogen exchange. These findings underscore the zoonotic risks posed by Chlamydia species circulating in this ecologically critical region, with implications for the health of local livestock (yaks, Tibetan sheep), human populations, and migratory bird conservation.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"78 1","pages":"28"},"PeriodicalIF":3.1,"publicationDate":"2025-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12577048/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145410868","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-28DOI: 10.1186/s13620-025-00292-5
Maggie Lyons, Angela Lahuerta-Marin, Joe Clarke, Asa Moyce, James McConville, Siobhan Porter, Maria Guelbenzu-Gonzalo, Ronan O'Neill, Sharon Verner, Eric R Morgan
Bovine Viral Diarrhoea Virus (BVDV), Border Disease Virus (BDV), and Bovine Herpesvirus-1 (BoHV-1, the cause of Infectious Bovine Rhinotracheitis, IBR), are economically important endemic viruses in ruminant livestock in the United Kingdom and Ireland. Deer could undermine control efforts in livestock by contributing to virus transmission and maintenance, but information on the presence of these viruses in the wild deer population is lacking. Blood samples from wild fallow and sika deer culled in Northern Ireland were collected opportunistically in the 2022-23 hunting season and tested using enzyme-linked immunosorbent assay (ELISA) for the presence of antibodies to these viruses (n = 116). No antibodies against BoHV-1 were detected. Antibodies against pestivirus were detected in three samples (2.6%), all from sika deer, and constitute the first report in this species in Europe. Virus strain differentiation by virus neutralization test (VNT) was inconclusive. Results therefore indicate no evidence of exposure to BoHV-1 and very low levels of pestivirus exposure in these deer populations. Based on these results there are currently no grounds to implicate deer as significant wildlife reservoirs of these viruses.
{"title":"No evidence of BoHV-1 exposure and low levels of pestivirus exposure in sera from 116 opportunistically sampled wild deer in Northern Ireland.","authors":"Maggie Lyons, Angela Lahuerta-Marin, Joe Clarke, Asa Moyce, James McConville, Siobhan Porter, Maria Guelbenzu-Gonzalo, Ronan O'Neill, Sharon Verner, Eric R Morgan","doi":"10.1186/s13620-025-00292-5","DOIUrl":"10.1186/s13620-025-00292-5","url":null,"abstract":"<p><p>Bovine Viral Diarrhoea Virus (BVDV), Border Disease Virus (BDV), and Bovine Herpesvirus-1 (BoHV-1, the cause of Infectious Bovine Rhinotracheitis, IBR), are economically important endemic viruses in ruminant livestock in the United Kingdom and Ireland. Deer could undermine control efforts in livestock by contributing to virus transmission and maintenance, but information on the presence of these viruses in the wild deer population is lacking. Blood samples from wild fallow and sika deer culled in Northern Ireland were collected opportunistically in the 2022-23 hunting season and tested using enzyme-linked immunosorbent assay (ELISA) for the presence of antibodies to these viruses (n = 116). No antibodies against BoHV-1 were detected. Antibodies against pestivirus were detected in three samples (2.6%), all from sika deer, and constitute the first report in this species in Europe. Virus strain differentiation by virus neutralization test (VNT) was inconclusive. Results therefore indicate no evidence of exposure to BoHV-1 and very low levels of pestivirus exposure in these deer populations. Based on these results there are currently no grounds to implicate deer as significant wildlife reservoirs of these viruses.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"78 1","pages":"26"},"PeriodicalIF":3.1,"publicationDate":"2025-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12570704/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145395093","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-24DOI: 10.1186/s13620-025-00312-4
Sin-Wook Park, Keon Kim, Young-Jae Lee, Yoon-Jung Do, Woong-Bin Ro, Chang-Min Lee
Transient myocardial thickening (TMT) is characterised by reversible left ventricular myocardial thickening. A 2-year-old castrated male British Shorthair was presented with a history of severe vomiting for 2 days. Based on abdominal radiography and ultrasonography, the cat was diagnosed with an obstructive gastrointestinal foreign body. Preoperative echocardiography revealed an increased maximum left ventricular wall thickness (LVWT: 6.9 mm, measured at end-diastole) and ratio of the left atrium to the aortic root (LA/Ao: 2.1), indicative of a hypertrophic cardiomyopathy phenotype. An enterotomy was performed, and the foreign body was found to be an almond. Immediately after surgery, the cat became tachypnoeic, and thoracic radiography revealed pulmonary oedema. The cat was then treated with cardiac medications. Five days after surgery, the cat's condition clinically normalised. Two months after the first presentation, repeated echocardiography revealed a decreased LVWT (4.8 mm) and LA/Ao (1.58). The cat was diagnosed with TMT, and all cardiac medications were discontinued. The cat remained clinically well for 14 months after the last presentation. This is the first case report to demonstrate that foreign body ingestion may cause TMT, and that congestive heart failure (CHF) can develop after enterotomy in cats with subclinical TMT. The possibility of TMT should be considered in cats with foreign body ingestion that requires anaesthesia and/or surgery because it may trigger CHF, which could ultimately lead to death.
{"title":"Congestive heart failure after enterotomy in a cat with asymptomatic transient myocardial thickening.","authors":"Sin-Wook Park, Keon Kim, Young-Jae Lee, Yoon-Jung Do, Woong-Bin Ro, Chang-Min Lee","doi":"10.1186/s13620-025-00312-4","DOIUrl":"10.1186/s13620-025-00312-4","url":null,"abstract":"<p><p>Transient myocardial thickening (TMT) is characterised by reversible left ventricular myocardial thickening. A 2-year-old castrated male British Shorthair was presented with a history of severe vomiting for 2 days. Based on abdominal radiography and ultrasonography, the cat was diagnosed with an obstructive gastrointestinal foreign body. Preoperative echocardiography revealed an increased maximum left ventricular wall thickness (LVWT: 6.9 mm, measured at end-diastole) and ratio of the left atrium to the aortic root (LA/Ao: 2.1), indicative of a hypertrophic cardiomyopathy phenotype. An enterotomy was performed, and the foreign body was found to be an almond. Immediately after surgery, the cat became tachypnoeic, and thoracic radiography revealed pulmonary oedema. The cat was then treated with cardiac medications. Five days after surgery, the cat's condition clinically normalised. Two months after the first presentation, repeated echocardiography revealed a decreased LVWT (4.8 mm) and LA/Ao (1.58). The cat was diagnosed with TMT, and all cardiac medications were discontinued. The cat remained clinically well for 14 months after the last presentation. This is the first case report to demonstrate that foreign body ingestion may cause TMT, and that congestive heart failure (CHF) can develop after enterotomy in cats with subclinical TMT. The possibility of TMT should be considered in cats with foreign body ingestion that requires anaesthesia and/or surgery because it may trigger CHF, which could ultimately lead to death.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"78 1","pages":"25"},"PeriodicalIF":3.1,"publicationDate":"2025-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12551150/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145368946","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-17DOI: 10.1186/s13620-025-00302-6
Thomas-Julian O Irabor, Clément Ngandjui Yonga, Makhan Danfakha, Jean-Luc Camille Hornick, Didier Gilbert Jean Marlier, Nicolas Antoine-Moussiaux
Veterinary education has long relied on lecture-based methods and conventional case-based learning, approaches that may not fully cultivate the critical and systems thinking skills required in today's complex clinical environment. In response, we developed an innovative digital tool that integrates interactive gaming, narrative-driven expression, and structured debriefing into a cohesive simulation framework. Using backyard poultry management-a case selected for its regulatory and ethical complexities in European practice-as our testbed, the simulation engages students through a point-and-click game focused on laying hens. The tool presents a series of interactive decision points and intentional "traps" that prompt reflective discussion during post-game debriefing sessions.A qualitative approach was employed to analyze data collected from focus group discussions, written group documents, and facilitator reflections during simulation sessions with veterinary students. Our thematic analysis identified three primary themes: (1) a multifactorial understanding of poultry health, (2) diverse perceptions of the veterinarian's role in managing complex challenges, and (3) the simulation as an effective reflective trigger for enhancing clinical reasoning. These findings indicate that the simulation not only promotes active learning and systems thinking but also bridges the gap between theoretical knowledge and real-world clinical decision-making by linking clinical observations with broader regulatory, economic, and social considerations.Despite limitations such as reliance on self-reported data and the absence of a control group, our study demonstrates that a facilitation-driven simulation framework can transform case-based learning into a dynamic, reflective inquiry process. This approach offers a promising alternative for enhancing educational outcomes in veterinary education and lays the groundwork for future research incorporating objective measures of competence and further refinements to balance structured guidance with learner autonomy.
{"title":"Bridging theory and practice: a facilitation-driven game for reflective, collaborative veterinary education.","authors":"Thomas-Julian O Irabor, Clément Ngandjui Yonga, Makhan Danfakha, Jean-Luc Camille Hornick, Didier Gilbert Jean Marlier, Nicolas Antoine-Moussiaux","doi":"10.1186/s13620-025-00302-6","DOIUrl":"10.1186/s13620-025-00302-6","url":null,"abstract":"<p><p>Veterinary education has long relied on lecture-based methods and conventional case-based learning, approaches that may not fully cultivate the critical and systems thinking skills required in today's complex clinical environment. In response, we developed an innovative digital tool that integrates interactive gaming, narrative-driven expression, and structured debriefing into a cohesive simulation framework. Using backyard poultry management-a case selected for its regulatory and ethical complexities in European practice-as our testbed, the simulation engages students through a point-and-click game focused on laying hens. The tool presents a series of interactive decision points and intentional \"traps\" that prompt reflective discussion during post-game debriefing sessions.A qualitative approach was employed to analyze data collected from focus group discussions, written group documents, and facilitator reflections during simulation sessions with veterinary students. Our thematic analysis identified three primary themes: (1) a multifactorial understanding of poultry health, (2) diverse perceptions of the veterinarian's role in managing complex challenges, and (3) the simulation as an effective reflective trigger for enhancing clinical reasoning. These findings indicate that the simulation not only promotes active learning and systems thinking but also bridges the gap between theoretical knowledge and real-world clinical decision-making by linking clinical observations with broader regulatory, economic, and social considerations.Despite limitations such as reliance on self-reported data and the absence of a control group, our study demonstrates that a facilitation-driven simulation framework can transform case-based learning into a dynamic, reflective inquiry process. This approach offers a promising alternative for enhancing educational outcomes in veterinary education and lays the groundwork for future research incorporating objective measures of competence and further refinements to balance structured guidance with learner autonomy.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"78 1","pages":"24"},"PeriodicalIF":3.1,"publicationDate":"2025-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12535145/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145314296","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}