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Psychological factors and the uptake of preventative measures in BRCA1/2 pathogenic variant carriers: results of a prospective cohort study. BRCA1/2致病变异携带者的心理因素和预防措施:一项前瞻性队列研究的结果
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-12-19 DOI: 10.1186/s13053-022-00244-y
Julia Dick, Anja Tüchler, Anne Brédart, Frank Vitinius, Kirsten Wassermann, Kerstin Rhiem, Rita K Schmutzler

Background: Women carrying BRCA1/2 pathogenic variants are exposed to elevated risks of developing breast cancer (BC) and are faced by a complex decision-making process on preventative measures, i.e., risk-reducing mastectomy (RRM), and intensified breast surveillance (IBS). In this prospective cohort study we investigated the effect of anxiety, personality factors and coping styles on the decision-making process on risk management options in women with pathogenic variants in BRCA1/2.

Methods: Breast cancer unaffected and affected women with a pathogenic variant in the BRCA1 or BRCA2 gene were psychologically evaluated immediately before (T0), 6 to 8 weeks (T1) and 6 to 8 months (T2) after the disclosure of their genetic test results. Uptake of RRM and IBS was assessed at T2. Psychological data were gathered using questionnaires on risk perception, personality factors, coping styles, decisional conflict, depression and anxiety, including the Hospital Anxiety and Depression Scale (HADS). We performed tests on statistical significance and fitted a logistic regression based on significance level.

Results: A total of 98 women were included in the analysis. Baseline anxiety levels in women opting for RRM were high but decreased over time, while they increased in women opting for intensified breast surveillance (IBS). Elevated levels of anxiety after genetic test result disclosure (T1) were associated with the decision to undergo RRM (p < 0.01; OR = 1.2, 95% CI = 1.05-1.42), while personal BC history and personality factors seemed to be less relevant.

Conclusions: Considering psychosocial factors influencing the decision-making process of women with pathogenic variants in BRCA1/2 may help improving their genetic and psychological counselling. When opting for IBS they may profit from additional medical and psychological counselling.

Trial registration: Retrospectively registered at the German Clinical Trials Register under DRKS00027566 on January 13, 2022.

背景:携带BRCA1/2致病变异的女性患乳腺癌(BC)的风险升高,并且面临着一个复杂的预防措施决策过程,即降低风险的乳房切除术(RRM)和加强乳房监测(IBS)。在这项前瞻性队列研究中,我们调查了焦虑、人格因素和应对方式对BRCA1/2致病变异女性风险管理选择决策过程的影响。方法:对BRCA1或BRCA2基因致病性变异的未受影响和未受影响的乳腺癌患者在基因检测结果披露前(T0)、6 ~ 8周(T1)和6 ~ 8个月(T2)进行心理评估。在T2时评估RRM和IBS的摄取情况。心理数据采用风险感知、人格因素、应对方式、决策冲突、抑郁和焦虑问卷,包括医院焦虑和抑郁量表(HADS)。我们进行了统计显著性检验,并根据显著性水平拟合了逻辑回归。结果:共有98名女性被纳入分析。选择RRM的妇女的基线焦虑水平很高,但随着时间的推移而下降,而选择强化乳房监测(IBS)的妇女的基线焦虑水平则有所增加。基因检测结果披露(T1)后焦虑水平升高与接受RRM的决定相关(p)结论:考虑影响BRCA1/2致病变异女性决策过程的社会心理因素可能有助于改善其遗传和心理咨询。当选择肠易激综合症时,他们可能会从额外的医疗和心理咨询中获益。试验注册:于2022年1月13日根据DRKS00027566在德国临床试验注册中心回顾性注册。
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引用次数: 1
The Prospective Lynch Syndrome Database: background, design, main results and complete MySQL code. 前瞻性Lynch综合征数据库:背景、设计、主要结果和完整的MySQL代码。
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-11-21 DOI: 10.1186/s13053-022-00243-z
Pål Møller

A brief description of why and for which purposes the Prospective Lynch Syndrome Database was established, the principles and design, and the main classes of results are given. Data input is assumption-free input enabling validation of paradigms used to explain the results. The design is considering cancer/age as discrete events to occur or not in a time dimension in a closed room compliant with population genetic paradigms and last centuries developing paradigms of interpreting discrete events reflecting conditional and/or co-occurring stochastic probabilities. Which may be in contrast to the paradigm that any observed event has a cause. The results may indicate that some current paradigms on carcinogenesis should be reconsidered. The complete analytic code in MySQL© syntax together with a flowchart illustrating how the different pieces of codes interrelate are included as supplementary files, enabling third parties to use or modify the code to examine prospectively observed events in their own activities when referring to this report as the source.

简要介绍了建立前瞻性Lynch综合征数据库的原因和目的,原则和设计,以及结果的主要类别。数据输入是无假设的输入,可以验证用于解释结果的范式。该设计将癌症/年龄视为离散事件,在一个封闭的房间里,在一个时间维度上发生或不发生,符合人口遗传范式和上个世纪发展的范式,这些范式解释了反映条件和/或共同发生的随机概率的离散事件。这可能与任何观察到的事件都有原因的范式相反。这一结果可能表明,目前的一些关于癌变的范式应该重新考虑。MySQL©语法中的完整分析代码与说明不同代码片段如何相互关联的流程图一起作为补充文件包含,使第三方能够使用或修改代码,以便在引用此报告作为源时检查自己活动中的前瞻性观察事件。
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引用次数: 3
Colorectal cancer incidences in Lynch syndrome: a comparison of results from the prospective lynch syndrome database and the international mismatch repair consortium. 林奇综合征的结直肠癌发病率:前瞻性林奇综合征数据库与国际错配修复联盟的结果比较。
IF 2 4区 医学 Q3 ONCOLOGY Pub Date : 2022-10-01 DOI: 10.1186/s13053-022-00241-1
Pål Møller, Toni Seppälä, James G Dowty, Saskia Haupt, Mev Dominguez-Valentin, Lone Sunde, Inge Bernstein, Christoph Engel, Stefan Aretz, Maartje Nielsen, Gabriel Capella, Dafydd Gareth Evans, John Burn, Elke Holinski-Feder, Lucio Bertario, Bernardo Bonanni, Annika Lindblom, Zohar Levi, Finlay Macrae, Ingrid Winship, John-Paul Plazzer, Rolf Sijmons, Luigi Laghi, Adriana Della Valle, Karl Heinimann, Elizabeth Half, Francisco Lopez-Koestner, Karin Alvarez-Valenzuela, Rodney J Scott, Lior Katz, Ido Laish, Elez Vainer, Carlos Alberto Vaccaro, Dirce Maria Carraro, Nathan Gluck, Naim Abu-Freha, Aine Stakelum, Rory Kennelly, Des Winter, Benedito Mauro Rossi, Marc Greenblatt, Mabel Bohorquez, Harsh Sheth, Maria Grazia Tibiletti, Leonardo S Lino-Silva, Karoline Horisberger, Carmen Portenkirchner, Ivana Nascimento, Norma Teresa Rossi, Leandro Apolinário da Silva, Huw Thomas, Attila Zaránd, Jukka-Pekka Mecklin, Kirsi Pylvänäinen, Laura Renkonen-Sinisalo, Anna Lepisto, Päivi Peltomäki, Christina Therkildsen, Lars Joachim Lindberg, Ole Thorlacius-Ussing, Magnus von Knebel Doeberitz, Markus Loeffler, Nils Rahner, Verena Steinke-Lange, Wolff Schmiegel, Deepak Vangala, Claudia Perne, Robert Hüneburg, Aída Falcón de Vargas, Andrew Latchford, Anne-Marie Gerdes, Ann-Sofie Backman, Carmen Guillén-Ponce, Carrie Snyder, Charlotte K Lautrup, David Amor, Edenir Palmero, Elena Stoffel, Floor Duijkers, Michael J Hall, Heather Hampel, Heinric Williams, Henrik Okkels, Jan Lubiński, Jeanette Reece, Joanne Ngeow, Jose G Guillem, Julie Arnold, Karin Wadt, Kevin Monahan, Leigha Senter, Lene J Rasmussen, Liselotte P van Hest, Luigi Ricciardiello, Maija R J Kohonen-Corish, Marjolijn J L Ligtenberg, Melissa Southey, Melyssa Aronson, Mohd N Zahary, N Jewel Samadder, Nicola Poplawski, Nicoline Hoogerbrugge, Patrick J Morrison, Paul James, Grant Lee, Rakefet Chen-Shtoyerman, Ravindran Ankathil, Rish Pai, Robyn Ward, Susan Parry, Tadeusz Dębniak, Thomas John, Thomas van Overeem Hansen, Trinidad Caldés, Tatsuro Yamaguchi, Verónica Barca-Tierno, Pilar Garre, Giulia Martina Cavestro, Jürgen Weitz, Silke Redler, Reinhard Büttner, Vincent Heuveline, John L Hopper, Aung Ko Win, Noralane Lindor, Steven Gallinger, Loïc Le Marchand, Polly A Newcomb, Jane Figueiredo, Daniel D Buchanan, Stephen N Thibodeau, Sanne W Ten Broeke, Eivind Hovig, Sigve Nakken, Marta Pineda, Nuria Dueñas, Joan Brunet, Kate Green, Fiona Lalloo, Katie Newton, Emma J Crosbie, Miriam Mints, Douglas Tjandra, Florencia Neffa, Patricia Esperon, Revital Kariv, Guy Rosner, Walter Hernán Pavicic, Pablo Kalfayan, Giovana Tardin Torrezan, Thiago Bassaneze, Claudia Martin, Gabriela Moslein, Aysel Ahadova, Matthias Kloor, Julian R Sampson, Mark A Jenkins

Objective: To compare colorectal cancer (CRC) incidences in carriers of pathogenic variants of the MMR genes in the PLSD and IMRC cohorts, of which only the former included mandatory colonoscopy surveillance for all participants.

Methods: CRC incidences were calculated in an intervention group comprising a cohort of confirmed carriers of pathogenic or likely pathogenic variants in mismatch repair genes (path_MMR) followed prospectively by the Prospective Lynch Syndrome Database (PLSD). All had colonoscopy surveillance, with polypectomy when polyps were identified. Comparison was made with a retrospective cohort reported by the International Mismatch Repair Consortium (IMRC). This comprised confirmed and inferred path_MMR carriers who were first- or second-degree relatives of Lynch syndrome probands.

Results: In the PLSD, 8,153 subjects had follow-up colonoscopy surveillance for a total of 67,604 years and 578 carriers had CRC diagnosed. Average cumulative incidences of CRC in path_MLH1 carriers at 70 years of age were 52% in males and 41% in females; for path_MSH2 50% and 39%; for path_MSH6 13% and 17% and for path_PMS2 11% and 8%. In contrast, in the IMRC cohort, corresponding cumulative incidences were 40% and 27%; 34% and 23%; 16% and 8% and 7% and 6%. Comparing just the European carriers in the two series gave similar findings. Numbers in the PLSD series did not allow comparisons of carriers from other continents separately. Cumulative incidences at 25 years were < 1% in all retrospective groups.

Conclusions: Prospectively observed CRC incidences (PLSD) in path_MLH1 and path_MSH2 carriers undergoing colonoscopy surveillance and polypectomy were higher than in the retrospective (IMRC) series, and were not reduced in path_MSH6 carriers. These findings were the opposite to those expected. CRC point incidence before 50 years of age was reduced in path_PMS2 carriers subjected to colonoscopy, but not significantly so.

目的:比较 PLSD 和 IMRC 队列中 MMR 基因致病性变异携带者的结直肠癌(CRC)发病率,其中只有前者对所有参与者进行了强制性结肠镜监测:在干预组中计算了癌症发病率,该干预组由错配修复基因(path_MMR)致病性或可能致病性变异的确诊携带者组成,由前瞻性林奇综合征数据库(PLSD)进行前瞻性跟踪。所有患者都接受了结肠镜检查,并在发现息肉时进行了息肉切除术。与国际错配修复联盟(IMRC)报告的回顾性队列进行了比较。该队列由林奇综合征疑似患者的一级或二级亲属中经证实和推断的路径_MMR携带者组成:结果:在 PLSD 中,8153 名受试者接受了共计 67604 年的结肠镜随访监测,其中 578 名携带者确诊为 CRC。路径_MLH1携带者在70岁时的平均累积癌症发病率为:男性52%,女性41%;路径_MSH2为50%,女性39%;路径_MSH6为13%,男性17%;路径_PMS2为11%,女性8%。相比之下,在IMRC队列中,相应的累积发病率分别为40%和27%;34%和23%;16%和8%以及7%和6%。仅比较这两个系列中的欧洲带原者,也得出了类似的结果。PLSD 系列中的数字无法单独比较其他大洲携带者的情况。在所有回顾性研究组中,25年的累积发病率均小于1%:接受结肠镜监测和息肉切除术的路径_MLH1和路径_MSH2携带者的前瞻性观察CRC发病率(PLSD)高于回顾性系列(IMRC),而路径_MSH6携带者的发病率并未降低。这些结果与预期相反。接受结肠镜检查的 path_PMS2 携带者 50 岁前的 CRC 点发病率有所降低,但并不明显。
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All had colonoscopy surveillance, with polypectomy when polyps were identified. Comparison was made with a retrospective cohort reported by the International Mismatch Repair Consortium (IMRC). This comprised confirmed and inferred path_MMR carriers who were first- or second-degree relatives of Lynch syndrome probands.</p><p><strong>Results: </strong>In the PLSD, 8,153 subjects had follow-up colonoscopy surveillance for a total of 67,604 years and 578 carriers had CRC diagnosed. Average cumulative incidences of CRC in path_MLH1 carriers at 70 years of age were 52% in males and 41% in females; for path_MSH2 50% and 39%; for path_MSH6 13% and 17% and for path_PMS2 11% and 8%. In contrast, in the IMRC cohort, corresponding cumulative incidences were 40% and 27%; 34% and 23%; 16% and 8% and 7% and 6%. Comparing just the European carriers in the two series gave similar findings. Numbers in the PLSD series did not allow comparisons of carriers from other continents separately. 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CRC point incidence before 50 years of age was reduced in path_PMS2 carriers subjected to colonoscopy, but not significantly so.</p>","PeriodicalId":55058,"journal":{"name":"Hereditary Cancer in Clinical Practice","volume":"20 1","pages":"36"},"PeriodicalIF":2.0,"publicationDate":"2022-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9526951/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9918770","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Modifier genes and Lynch syndrome: some considerations. 修饰基因与Lynch综合征:一些考虑。
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-09-10 DOI: 10.1186/s13053-022-00240-2
Rodney J Scott

Lynch Syndrome (LS) is a highly variable entity with some patients presenting at very young ages with malignancy whereas others may never develop a malignancy yet carry an unequivocal genetic predisposition to disease. The most frequent LS malignancy remains colorectal cancer, a disease that is thought to involve genetic as well as environmental factors in its aetiology. Environmental insults are undeniably associated with cancer risk, especially those imparted by such activities as smoking and excessive alcohol consumption. Notwithstanding, in an inherited predisposition the expected exposures to an environmental insult are considered to be complex and require knowledge about the respective exposure and how it might interact with a genetic predisposition. Typically, smoking is one of the major confounders when considering environmental factors that can influence disease expression on a background of significant genetic risk. In addition to environmental triggers, the risk of developing a malignancy for people carrying an inherited predisposition to disease can be influenced by additional genetic factors that do not necessarily segregate with a disease predisposition allele. The purpose of this review is to examine the current state of modifier gene detection in people with a genetic predisposition to develop LS and present some data that supports the notion that modifier genes are gene specific thus explaining why some modifier gene studies have failed to identify associations when this is not taken into account.

Lynch综合征(LS)是一个高度可变的实体,一些患者在很小的时候就表现出恶性肿瘤,而另一些患者可能从未发展成恶性肿瘤,但却携带明确的遗传易感性。最常见的LS恶性肿瘤仍然是结肠直肠癌,这种疾病被认为在其病因中涉及遗传和环境因素。不可否认,环境损害与癌症风险有关,特别是那些由吸烟和过度饮酒等活动造成的损害。尽管如此,在遗传易感性中,对环境损害的预期暴露被认为是复杂的,需要了解各自的暴露以及它如何与遗传易感性相互作用。通常,在考虑环境因素时,吸烟是主要的混杂因素之一,这些环境因素可以影响具有重大遗传风险背景的疾病表达。除了环境因素外,携带遗传疾病易感性的人患恶性肿瘤的风险可能受到其他遗传因素的影响,这些遗传因素不一定与疾病易感性等位基因分离。本综述的目的是研究具有LS遗传易感性的人群中修饰基因检测的现状,并提供一些数据来支持修饰基因是基因特异性的概念,从而解释为什么一些修饰基因研究在没有考虑到这一点的情况下未能确定相关性。
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引用次数: 3
Mainstream genetic testing for women with ovarian cancer provides a solid basis for patients to make a well-informed decision about genetic testing. 针对卵巢癌女性的主流基因检测为患者做出明智的基因检测决定提供了坚实的基础。
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-09-08 DOI: 10.1186/s13053-022-00238-w
Kyra Bokkers, Eveline M A Bleiker, Jacob P Hoogendam, Mary E Velthuizen, Henk W R Schreuder, Cornelis G Gerestein, Joost G Lange, Jacqueline A Louwers, Marco J Koudijs, Margreet G E M Ausems, Ronald P Zweemer

Background: There is a growing need for genetic testing of women with epithelial ovarian cancer. Mainstream genetic testing provides an alternative care pathway in which non-genetic healthcare professionals offer pre-test counseling themselves. We aimed to explore the impact of mainstream genetic testing on patients' experiences, turnaround times and adherence of non-genetic healthcare professionals to the mainstream genetic testing protocol.

Methods: Patients receiving pre-test counseling at the gynecology departments between April 2018 and April 2020 were eligible to participate in our intervention group. Patients receiving pre-test counseling at the genetics department between January 2017 and April 2020 were eligible to participate in our control group. We evaluated patients' experiences with questionnaires, consisting of questions regarding knowledge, satisfaction and psychosocial outcomes. Patients in the intervention group were sent two questionnaires: one after pre-test counseling and one after receiving their DNA test result. Patients in our control group were sent one questionnaire after receiving their test result. In addition, we collected data regarding turnaround times and adherence of non-genetic healthcare professionals to the mainstream genetic testing protocol.

Results: Participation was 79% in our intervention group (105 out of 133 patients) and 60% in our control group (91 out of 152 patients). Knowledge regarding genetics, decisional conflict, depression, anxiety, and distress were comparable in the two groups. In the intervention group, the risk of breast cancer in patients carrying a pathogenic germline variant was discussed less often (49% versus 74% in control group, p ≤ 0.05), and the mean score of regret about the decision to have genetic testing was higher than in the control group (mean 12.9 in the intervention group versus 9.7 in the control group, p ≤ 0.05), although below the clinically relevant threshold of 25. A consent form for the DNA test and a checklist to assess family history were present for ≥ 95% of patients in the intervention group.

Conclusion: Mainstream genetic testing is an acceptable approach to meet the increase in genetic testing among women with epithelial ovarian cancer.

背景:对患有上皮性卵巢癌的女性进行基因检测的需求越来越大。主流基因检测提供了一种替代的护理途径,其中非基因保健专业人员自己提供检测前咨询。我们的目的是探讨主流基因检测对患者体验、周转时间和非基因保健专业人员对主流基因检测方案的依从性的影响。方法:2018年4月至2020年4月期间在妇科接受测试前咨询的患者纳入我们的干预组。2017年1月至2020年4月期间在遗传学部接受测试前咨询的患者有资格参加我们的对照组。我们用问卷评估患者的经历,包括知识、满意度和心理社会结果等问题。干预组的患者收到两份问卷:一份是在测试前咨询后收到的,另一份是在收到DNA测试结果后收到的。对照组患者在收到检测结果后发给一份问卷。此外,我们收集了有关周转时间和非基因保健专业人员对主流基因检测方案的依从性的数据。结果:干预组(133例患者中105例)的参与率为79%,对照组(152例患者中91例)的参与率为60%。关于遗传学、决策冲突、抑郁、焦虑和痛苦的知识在两组中具有可比性。在干预组中,携带致病性种系变异的患者患乳腺癌的风险较少被讨论(49%比对照组的74%,p≤0.05),对决定进行基因检测的后悔平均得分高于对照组(干预组平均12.9比对照组平均9.7,p≤0.05),尽管低于25的临床相关阈值。干预组≥95%的患者有DNA检测同意书和评估家族史的检查表。结论:主流基因检测是满足上皮性卵巢癌女性基因检测增加的一种可接受的方法。
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引用次数: 4
Low-level constitutional mosaicism of BRCA1 in two women with young onset ovarian cancer. 两名年轻卵巢癌女性BRCA1低水平结构嵌合体
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-09-06 DOI: 10.1186/s13053-022-00237-x
B Speight, E Colvin, E D Epurescu, J Drummond, S Verhoef, M Pereira, D G Evans, M Tischkowitz

Germline pathogenic variants in BRCA1 and BRCA2 cause hereditary breast and ovarian cancer. The vast majority of these variants are inherited from a parent. De novo constitutional pathogenic variants are rare. Even fewer cases of constitutional mosaicism have been reported and these have mostly been described in women with breast cancer. Here we report low-level constitutional mosaicism identified by Next Generation Sequencing in two women with ovarian cancer. A BRCA1 c.5074G > A p.(Asp1692Asn) variant detected in the first female at 42 years, classed as likely pathogenic, was found in ~ 52% of reads in DNA extracted from tumour, ~ 10% of reads in DNA extracted from peripheral blood leukocytes and ~ 10% of reads in DNA extracted from buccal mucosa. The second BRCA1 c.2755_2758dupCCTG p.(Val920AlafsTer6) variant was detected in a female aged 53 years, classed as pathogenic, and was found in ~ 59% of reads in DNA extracted from tumour, ~ 14% of reads in DNA extracted from peripheral blood leukocytes and similarly in ~ 14% of reads in both DNA extracted from buccal mucosa and urine sample. Sanger sequencing confirmed the presence of these variants at a corresponding low level consistent with mosaicism that may not have been detected by this method alone. This report demonstrates the clinical benefit for two women of BRCA1/BRCA2 germline NGS testing at a depth that can detect low-level mosaicism. As well as informing appropriate treatments, tumour sequencing results may facilitate the detection and interpretation of low-level mosaic variants in the germline. Both results have implications for other cancer risks and for relatives when providing a family cancer risk assessment and reproductive risk. The implications for laboratory practice, clinical genetics management and genetic counselling for constitutional mosaicism of BRCA1/BRCA2 are discussed.

BRCA1和BRCA2的种系致病性变异导致遗传性乳腺癌和卵巢癌。这些变异中的绝大多数是从父母那里遗传来的。新生的体质致病性变异是罕见的。甚至更少的情况下,宪法马赛克已被报道,这些大多被描述为妇女乳腺癌。在这里,我们报告低水平的结构镶嵌鉴定的下一代测序两名妇女卵巢癌。在42岁的第一位女性中检测到一种BRCA1 c.5074G > A p.(Asp1692Asn)变异,被分类为可能致病,在肿瘤提取的DNA中发现约52%的reads,在外周血白细胞提取的DNA中发现约10%的reads,在口腔粘膜提取的DNA中发现约10%的reads。第二种BRCA1 c.2755_2758dupCCTG p.(Val920AlafsTer6)变异在一名53岁的女性中被检测到,被分类为致癌性,在肿瘤提取的DNA中有~ 59%的reads被发现,在外周血白细胞提取的DNA中有~ 14%的reads被发现,在口腔粘膜和尿液样本中都有~ 14%的reads被发现。Sanger测序证实了这些变体在相应的低水平上的存在,与马赛克现象一致,这可能是单独用这种方法无法检测到的。该报告证明了两名女性进行BRCA1/BRCA2生殖系NGS检测的临床益处,该检测深度可以检测低水平嵌合。肿瘤测序结果不仅可以为适当的治疗提供信息,还可以促进对种系中低水平嵌合变异的检测和解释。这两个结果对其他癌症风险以及提供家庭癌症风险评估和生殖风险的亲属都有影响。本文讨论了BRCA1/BRCA2的结构嵌合体对实验室实践、临床遗传学管理和遗传咨询的影响。
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引用次数: 4
BRCA1/2 variants and copy number alterations status in non familial triple negative breast cancer and high grade serous ovarian cancer. BRCA1/2变异和拷贝数改变在非家族性三阴性乳腺癌和高级别浆液性卵巢癌中的地位
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-08-19 DOI: 10.1186/s13053-022-00236-y
Fatima Zahra El Ansari, Farah Jouali, Rim Fekkak, Joaira Bakkach, Naima Ghailani Nourouti, Amina Barakat, Mohcine Bennani Mechita, Jamal Fekkak

Background: While the role of BRCA1/2 genes in familial breast and ovarian cancer is well established, their implication in the sporadic form of both cancers is still controversial. With the development of poly (ADP-ribose) polymerase (PARP) inhibitors, the exact relationship between BRCA1/2 genes and sporadic triple negative breast cancer/high grade serous carcinoma (TNBC/HGSC) needs to be further investigated. Therefore, we conducted a study in which we analyze BRCA1/2 point mutations and copy number alterations in Moroccan patients suffering from TNBC/HGSC.

Methods: To achieve our goal, we analyzed BRCA1/2 genes in the FFPE tissue blocks and blood samples of 65 TNBC/HGSC selected patients, using next generation sequencing technology.

Results: From the 65 successfully sequenced patients in our cohort, we detected five-point variants in six different patients, four variants were classified as pathogenic and one of unknown significance. Regarding copy number alterations we detected one copy number loss in BRCA1 gene and one copy number gain in BRCA2 gene. The genetic screening of BRCA1/2 genes using these patients' genomic DNA indicated that five harbored a germline genetic alteration. While three harbored a somatic genetic alteration. To the best of our knowledge, three-point variants detected in our study have never been reported before.

Conclusion: According to the results found in the present study, in a population without a family history of cancer, the possibility of a BRCA1/2 somatic pathogenic variant in high grade serous carcinoma is 7%. While for Triple negative breast cancer somatic point variants and copy number alterations seems to be a very rare genetic event.

背景:虽然BRCA1/2基因在家族性乳腺癌和卵巢癌中的作用已经确立,但它们在这两种癌症的散发性形式中的含义仍然存在争议。随着聚(adp -核糖)聚合酶(PARP)抑制剂的开发,BRCA1/2基因与散发性三阴性乳腺癌/高级别浆液性癌(TNBC/HGSC)之间的确切关系有待进一步研究。因此,我们进行了一项研究,分析了摩洛哥TNBC/HGSC患者的BRCA1/2点突变和拷贝数改变。方法:为了实现我们的目标,我们使用下一代测序技术分析了65例TNBC/HGSC患者FFPE组织块和血液样本中的BRCA1/2基因。结果:在我们的队列中65例成功测序的患者中,我们在6例不同的患者中检测到5点变异,4个变异被归类为致病性,1个变异的意义未知。关于拷贝数改变,我们检测到BRCA1基因的一个拷贝数丢失,BRCA2基因的一个拷贝数增加。利用这些患者的基因组DNA对BRCA1/2基因进行遗传筛选表明,其中5例存在种系遗传改变。另外三个则有体细胞基因改变。据我们所知,在我们的研究中检测到的三点变异以前从未报道过。结论:根据本研究结果,在无癌症家族史的人群中,BRCA1/2体细胞致病性变异在高级别浆液性癌中的可能性为7%。而对于三阴性乳腺癌,体细胞点变异和拷贝数改变似乎是非常罕见的遗传事件。
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引用次数: 1
Current status of inherited pancreatic cancer. 遗传性胰腺癌的现状。
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-06-27 DOI: 10.1186/s13053-022-00224-2
Marek Olakowski, Łukasz Bułdak

Background: It is estimated that about 10% of pancreatic cancer cases have a genetic background. People with a familial predisposition to pancreatic cancer can be divided into 2 groups. The first is termed hereditary pancreatic cancer, which occurs in individuals with a known hereditary cancer syndrome caused by germline single gene mutations (e.g., BRCA1/2, CDKN2A). The second is considered as familial pancreatic cancer, which is associated with several genetic factors responsible for the more common development of pancreatic cancer in certain families, but the precise single gene mutation has not been found.

Aim: This review summarizes the current state of knowledge regarding the risk of pancreatic cancer development in hereditary pancreatic cancer and familial pancreatic cancer patients. Furthermore, it gathers the latest recommendations from the three major organizations dealing with the prevention of pancreatic cancer in high-risk groups and explores recent guidelines of scientific societies on screening for pancreatic cancers in individuals at risk for hereditary or familial pancreatic cancer.

Conclusions: In order to improve patients' outcomes, authors of current guidelines recommend early and intensive screening in patients with pancreatic cancer resulting from genetic background. The screening should be performed in excellence centers. The scope, extent and cost-effectiveness of such interventions requires further studies.

背景:据估计,约10%的胰腺癌病例有遗传背景。有家族性胰腺癌易感性的人可分为两组。第一种被称为遗传性胰腺癌,它发生在由种系单基因突变(如BRCA1/2, CDKN2A)引起的已知遗传性癌症综合征的个体中。第二种被认为是家族性胰腺癌,它与几个遗传因素有关,这些遗传因素在某些家族中更常见的胰腺癌的发展,但精确的单基因突变尚未发现。目的:本文综述了遗传性胰腺癌和家族性胰腺癌患者胰腺癌发生风险的研究现状。此外,它还收集了有关高危人群胰腺癌预防的三个主要组织的最新建议,并探讨了科学学会对有遗传性或家族性胰腺癌风险的个体进行胰腺癌筛查的最新指南。结论:为了改善患者的预后,当前指南的作者建议对遗传背景导致的胰腺癌患者进行早期和强化筛查。筛查应在卓越中心进行。这些干预措施的范围、程度和成本效益需要进一步研究。
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引用次数: 6
Psychological and health behaviour outcomes following multi-gene panel testing for hereditary breast and ovarian cancer risk: a mini-review of the literature. 遗传性乳腺癌和卵巢癌风险多基因小组检测后的心理和健康行为结果:文献综述
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-06-22 DOI: 10.1186/s13053-022-00229-x
Lindsay Carlsson, Emily Thain, Brittany Gillies, Kelly Metcalfe

Introduction: Knowledge of the genetic mechanisms driving hereditary breast and ovarian cancer (HBOC) has recently expanded due to advances in gene sequencing technologies. Genetic testing for HBOC risk now involves multi-gene panel testing, which includes well characterized high-penetrance genes (e.g. BRCA1 and BRCA2), as well as moderate- and low-penetrance genes. Certain moderate and low penetrance genes are associated with limited data to inform cancer risk estimates and clinical management recommendations, which create new sources of genetic and clinical uncertainty for patients.

Purpose: The aim of this review is to evaluate the psychological and health behaviour outcomes associated with multi-gene panel testing for HBOC risk. The search was developed in collaboration with an Information Specialist (Princess Margaret Cancer Centre) and conducted in the following databases: MEDLINE, EMBASE, EMCare, PsycINFO, Epub Ahead of Publication.

Results: Similar to the BRCA1/2 literature, individuals with a pathogenic variant (PV) reported higher levels of testing-related concerns and cancer-specific distress, as well as higher uptake of prophylactic surgery in both affected and unaffected individuals compared to those with variant of uncertain significance (VUS) or negative result. A single study demonstrated that individuals with a PV in a moderate penetrance gene reported higher rates of cancer worry, genetic testing concerns and cancer-related distress when compared to women with high penetrance PV. Analysis of cancer screening and prevention outcomes based upon gene penetrance were limited to two studies, with conflicting findings.

Conclusion: The findings in this review emphasize the need for studies examining psychological and health behavior outcomes associated with panel testing to include between group differences based upon both variant pathogenicity and gene penetrance. Future studies evaluating the impact of gene penetrance on patient-reported and clinical outcomes will require large samples to be powered for these analyses given that a limited number of tested individuals are found to have a PV.

导读:由于基因测序技术的进步,导致遗传性乳腺癌和卵巢癌(HBOC)的遗传机制的知识最近得到了扩展。HBOC风险的基因检测现在涉及多基因面板检测,其中包括特征明确的高外显基因(例如BRCA1和BRCA2),以及中外显基因和低外显基因。某些中等和低外显率基因与有限的数据相关,无法为癌症风险评估和临床管理建议提供信息,这为患者带来了新的遗传和临床不确定性来源。目的:本综述的目的是评估与HBOC风险的多基因面板检测相关的心理和健康行为结果。该搜索是与信息专家(玛格丽特公主癌症中心)合作开发的,并在以下数据库中进行:MEDLINE, EMBASE, EMCare, PsycINFO, Epub出版前。结果:与BRCA1/2文献相似,与具有不确定意义变异(VUS)或阴性结果的个体相比,具有致病性变异(PV)的个体报告了更高水平的检测相关担忧和癌症特异性痛苦,以及受影响和未受影响个体更高的预防性手术接受率。一项研究表明,与具有高外显率PV的女性相比,具有中等外显率PV的个体报告了更高的癌症担忧率、基因检测担忧率和癌症相关焦虑率。基于基因外显率的癌症筛查和预防结果分析仅限于两项研究,结果相互矛盾。结论:本综述的研究结果强调有必要研究与小组检测相关的心理和健康行为结果,包括基于变异致病性和基因外显率的组间差异。未来评估基因外显率对患者报告和临床结果的影响的研究将需要大量样本来支持这些分析,因为发现有限数量的测试个体具有PV。
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引用次数: 3
Spectrum of germline pathogenic variants using a targeted next generation sequencing panel and genotype-phenotype correlations in patients with suspected hereditary breast cancer at an academic medical centre in Pakistan 在巴基斯坦的一个学术医疗中心,在疑似遗传性乳腺癌患者中使用靶向下一代测序小组和基因型-表型相关性的种系致病变异谱
IF 1.7 4区 医学 Q3 ONCOLOGY Pub Date : 2022-06-16 DOI: 10.1186/s13053-022-00232-2
Akbar, Fizza, Siddiqui, Zahraa, Waheed, Muhammad Talha, Ehsan, Lubaina, Ali, Syed Ibaad, Wiquar, Hajra, Valimohammed, Azmina Tajuddin, Khan, Shaista, Vohra, Lubna, Zeeshan, Sana, Rashid, Yasmin, Moosajee, Munira, Jabbar, Adnan Abdul, Zahir, Muhammad Nauman, Zahid, Naila, Soomro, Rufina, Ullah, Najeeb Niamat, Ahmad, Imran, Haider, Ghulam, Ansari, Uzair, Rizvi, Arjumand, Mehboobali, Arif, Sattar, Abida, Kirmani, Salman
Breast cancer is the most common malignancy in women, affecting over 1.5 million women every year, which accounts for the highest number of cancer-related deaths in women globally. Hereditary breast cancer (HBC), an important subset of breast cancer, accounts for 5–10% of total cases. However, in Low Middle-Income Countries (LMICs), the population-specific risk of HBC in different ethnicities and the correlation with certain clinical characteristics remain unexplored. Retrospective chart review of patients who visited the HBC clinic and proceeded with multi-gene panel testing from May 2017 to April 2020. Descriptive and inferential statistics were used to analyze clinical characteristics of patients. Fisher’s exact, Pearson’s chi-squared tests and Logistic regression analysis were used for categorical variables and Wilcoxon rank-sum test were used for quantitative variables. For comparison between two independent groups, Mann-Whitney test was performed. Results were considered significant at a p value of < 0.05. Out of 273 patients, 22% tested positive, 37% had a VUS and 41% had a negative genetic test result. Fifty-five percent of the positive patients had pathogenic variants in either BRCA1 or BRCA2, while the remaining positive results were attributed to other genes. Patients with a positive result had a younger age at diagnosis compared to those having a VUS and a negative result; median age 37.5 years, IQR (Interquartile range) (31.5–48). Additionally, patients with triple negative breast cancer (TNBC) were almost 3 times more likely to have a positive result (OR = 2.79, CI = 1.42–5.48 p = 0.003). Of all patients with positive results, 25% of patients had a negative family history of breast and/or related cancers. In our HBC clinic, we observed that our rate of positive results is comparable, yet at the higher end of the range which is reported in other populations. The importance of expanded, multi-gene panel testing is highlighted by the fact that almost half of the patients had pathogenic or likely pathogenic variants in genes other than BRCA1/2, and that our test positivity rate would have only been 12.8% if only BRCA1/2 testing was done. As the database expands and protocol-driven referrals are made across the country, our insight about the genetic architecture of HBC in our population will continue to increase.
乳腺癌是妇女中最常见的恶性肿瘤,每年影响150多万妇女,是全球妇女与癌症有关的死亡人数最多的。遗传性乳腺癌(HBC)是乳腺癌的一个重要亚型,占总病例的5-10%。然而,在中低收入国家(LMICs),不同种族的人群特异性HBC风险及其与某些临床特征的相关性仍未得到研究。2017年5月至2020年4月到HBC诊所就诊并进行多基因面板检测的患者回顾性图表回顾。采用描述性统计和推断性统计分析患者的临床特征。分类变量采用Fisher精确检验、Pearson卡方检验和Logistic回归分析,定量变量采用Wilcoxon秩和检验。两独立组间比较采用Mann-Whitney检验。p值< 0.05时认为结果显著。在273名患者中,22%的检测结果呈阳性,37%的人患有VUS, 41%的人基因检测结果为阴性。55%的阳性患者有BRCA1或BRCA2的致病变异,而其余的阳性结果归因于其他基因。与VUS阳性结果的患者相比,VUS阳性结果的患者在诊断时年龄更小;中位年龄37.5岁,IQR(四分位数间距)(31.5-48)。此外,三阴性乳腺癌(TNBC)患者的阳性结果几乎是三倍(OR = 2.79, CI = 1.42-5.48 p = 0.003)。在所有阳性结果的患者中,25%的患者有乳腺癌和/或相关癌症的阴性家族史。在我们的HBC诊所中,我们观察到我们的阳性结果率是相当的,但在其他人群中报道的范围的高端。事实上,几乎一半的患者在BRCA1/2以外的基因中具有致病性或可能致病性变异,并且如果只进行BRCA1/2检测,我们的检测阳性率仅为12.8%,这突出了扩展的多基因面板检测的重要性。随着数据库的扩展和协议驱动的转诊在全国范围内进行,我们对人群中HBC遗传结构的了解将继续增加。
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引用次数: 5
期刊
Hereditary Cancer in Clinical Practice
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