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Surirella wulingensis sp. nov. and fine structure of S. tientsinensis Skvortzov (Bacillariophyceae) from China 中国武林活菌及其精细结构的研究
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2019-10-30 DOI: 10.5507/FOT.2019.006
Bing Liu, S. Blanco, L. Ector, Zhu-xiang Liu, Juan Ai
Two Surirella species from China are studied using light and scanning electron microscopy. Surirella wulingensis sp. nov., discovered from Li River (located in Wuling Mountains, China), bears five undulations from pole to pole throughout the whole valve diminution series and parallel valve margins, which differ from other similar taxa. Based on the observations of the fine structure, an amended description is provided for S. tientsinensis which possesses a unique character within the genus Surirella: rounded and rimmed outer openings of areolae. Three new morphological terms are proposed: costa-stria bundle (CSB), over-fibula costa (OFC), and mantle sinking against a fibula (MSAF), which can be used for describing some Surirella taxa more succinctly and explicitly including these taxa in this study.
利用光学显微镜和扫描电子显微镜对中国两种苏雷氏菌进行了研究。武陵山李河流域发现的五棱苏氏菌(Surirella wulingensis sp.nov.),在整个缩瓣序列和平行的瓣缘上,从极点到极点有五个起伏,与其他类似类群不同。在对其精细结构观察的基础上,对苏瑞拉属中具有独特特征的田氏S.tientsinensis进行了修改描述:乳晕的圆形和有边框的外部开口。提出了三个新的形态学术语:肋纹束(CSB)、腓骨肋上(OFC)和腓骨套沉(MSAF),可用于更简洁、明确地描述苏雷氏菌的一些分类群,包括本研究中的这些分类群。
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引用次数: 7
First record of the rare freshwater alga Tetrasporopsis fuscescens (Chrysomerophyceae, Ochrophyta) in North America 北美洲罕见淡水藻类四孢子虫(金藻科,绿藻门)的首次记录
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2019-10-30 DOI: 10.5507/FOT.2019.007
R. Stancheva, P. Škaloud, M. Pusztai, Chad L. Loflen, R. Sheath
This study presents the first record of the ochrophyte alga Tetrasporopsis fuscescens in North America, confirmed with light and transmission electron microscopic photomicrographs, cytochemical and molecular phylogenetic analyses. T. fuscescens was recorded rarely, being found in the benthos of only twelve stream sites: nine locations in Southern California and three in Northern California. More than half of the streams were non-perennial, characterized by long dry periods. Tetrasporopsis cells were gold-colored, spherical, with a distinct wall, assembled in the periphery of macroscopical gelatinous colonies, which start as tubular or sac-like structures, but later become membranous. The cells have 1-2 parietal chloroplasts, without a stigma or pyrenoid, and reproduction occurs by longitudinal cell division. Other features of the genus are as follows: cells in the colonies also divide by what appears to be smaller autospores with remnant cell walls remaining, the colonial mucilage consists of cylindrical dichotomously branched tubes radiating from the center of the colony to which attach the peripheral cells, and older cells become filled with large oil droplets. A combined gene tree of sequences from nuclear SSU rDNA, plastid rbcL, psaA, psbA and psbC showed that T. fuscescens specimens from Europe and U. S. A. formed a clade, which clustered with taxa classified in the class Chrysomerophyceae.
本文报道了北美首次记录到的褐藻四孢子藻(Tetrasporopsis fuscescens),并通过光镜和透射电子显微镜、细胞化学和分子系统发育分析进行了证实。fuscescens很少被记录,只在12个河流地点的底栖动物中被发现:9个在南加州,3个在北加州。超过一半的河流是非多年生的,其特点是长时间的干旱。四孢子虫细胞呈金黄色,呈球形,有明显的壁,聚集在宏观胶状菌落的周围,菌落开始呈管状或囊状结构,但后来变成膜状。细胞有1-2个顶叶叶绿体,没有柱头或类核蛋白,通过纵向细胞分裂进行生殖。该属的其他特征如下:菌落中的细胞也分裂成看起来更小的带有残余细胞壁的自孢子,菌落粘液由从菌落中心辐射的圆柱形二分分枝管组成,这些管附着在周围细胞上,老细胞充满了大的油滴。核SSU rDNA、质体rbcL、psaA、psbA和psbC序列的组合基因树分析表明,欧洲和美国的fuscesensis标本形成了一个分支,与chrysomophyceae纲的分类群聚在一起。
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引用次数: 4
Lagosinema tenuis gen. et sp. nov. (Prochlorotrichaceae, Cyanobacteria): a new brackish water genus from Tropical Africa Lagosinema tenuis gen. et sp. 11 .(原绿藻科,蓝藻门):来自热带非洲的咸淡水新属
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2019-04-01 DOI: 10.5507/FOT.2018.012
S. C. Akagha, J. Johansen, D. Nwankwo, K. Yin
A novel filamentous, nonheterocytous cyanobacterium was isolated from Lagos Lagoon, Nigeria. The isolate was <3.0 µm wide, untapered, with small rounded polar bodies (aerotopes or cyanophycin granules) visible at the crosswalls, and consequently fit the morphological description of Limnothrix planctonica. Although morphologically inseparable from that species, it was molecularly distant from that taxon, with genetic identities between the two taxa ranging 90.73-92.49%, a degree of separation typical of different genera. Both taxa, as well as Limnothrix rosea, are phylogenetically in the Prochlorotrichaceae, distant from the type species of Limnothrix, L. redekei, which is in the Pseudanabaenaceae. The isolate is herein described as Lagosinema tenuis gen. et sp. nov.
从尼日利亚拉各斯泻湖分离到一种新型丝状非异源细胞蓝细菌。该分离物宽度<3.0µm,未经处理,侧壁可见小的圆形极性体(aerotopes或蓝藻素颗粒),因此符合平核新月星的形态描述。尽管在形态上与该物种不可分割,但在分子上与该分类单元相距甚远,两个分类单元之间的遗传同一性范围为90.73-92.49%,这是不同属的典型分离程度。这两个分类群,以及玫瑰月见草,在系统发育上都属于原氯虫科,与月见草的模式种L.redekei相距甚远,后者属于Pseudanabaenaceae。该分离物在本文中被描述为Lagosinema tenuis gen.et sp.nov。
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引用次数: 9
Phylogenetically distant clade of Nostoc-like taxa with the description of Minunostoc gen. nov. and Minunostoc cylindricum sp. nov 具有Minunostoc gen. 11和Minunostoc icum sp. nov描述的nostoc -样分类群的系统发育远分支
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2019-04-01 DOI: 10.5507/FOT.2018.013
Fangfang Cai, Xiaochuang Li, Ruozhen Geng, Xin Peng, Renhui Li
Two cyanobacterial strains morphologically identified to the genus Nostoc were isolated from a wet rocky wall in a mid-subtropical region in China, and they were taxonomically and phylogenetically characterized based on the polyphasic approach combining morphological and genetic characteristics. 16S rRNA gene sequence analysis showed that the two strains containing six clones were all >99.6% similar to each other, but had < 94.3% similarities to the existing cyanobacterial genera. The phylogenies based on 16S rRNA and rpoC1 gene sequences indicated that their sequences grouped into a unique and robust cluster with high bootstrap values. This unique cluster was separated from the clade of the 'Nostoc sensu stricto' and the respective clades formed by the morphologically similar genera Mojavia, Desmonostoc, Aliinostoc, Komarekiella and Halotia. The 16S-23S rRNA ITS secondary structure of the both strains exhibited the unique pattern of D1-D1´, Box-B and V3 helix, distinguishing it from the other heterocytous genera. Such a clear cluster leads to the establishment of Minunostoc gen. nov., with the type species as Minunostoc cylindricum sp. nov.
从中国中亚热带潮湿的岩壁上分离到两株形态鉴定为发菜属的蓝藻菌株,并采用形态学和遗传学相结合的多相方法对其进行了分类和系统发育特征鉴定。16S rRNA基因序列分析表明,包含6个克隆的两个菌株彼此的相似性均>99.6%,但与现有的蓝藻属的相似性<94.3%。基于16S rRNA和rpoC1基因序列的系统发育表明,它们的序列组成了一个独特而稳健的簇,具有较高的自举值。这个独特的集群是从“严格意义上的Nostoc”的分支和形态相似的Mojavia属、Desmonostoc属、Aliinostoc属、Komarekiella属和Halotia属形成的各自分支中分离出来的。这两个菌株的16S-23S rRNA ITS二级结构都表现出独特的D1-D1´、Box-B和V3螺旋模式,将其与其他异源细胞属区分开来。这样一个清晰的聚类导致了Minunostoc gen.nov.的建立,模式种为Minunostoch cylindrium sp.nov。
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引用次数: 30
Revision of the Psammothidium manguinii complex (Bacillariophyta) in the sub-Antarctic Region with the description of four new taxa 亚南极地区沙门藻复合体(硅藻门)的修订及四个新分类群的描述
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2019-04-01 DOI: 10.5507/FOT.2019.001
B. Vijver
Psammothidium manguinii is a common constituent of the limnoterrestrial diatom flora of the Antarctic Region. The species shows a broad variability in several morphological and morphometrical features such as valve outline, valve width, striation pattern and length/width ratio. Analysis of the type material of Achnanthes manguinii, described by Hustedt in 1952, and A. manguinii var. elliptica, described by Manguin two years later, together with an analysis of a large number of P. manguinii populations from the sub-Antarctic Region (with samples from all major islands in the southern Atlantic, Indian and Pacific Ocean), resulted in a clear morphological revision of the species. Four new species are described, P. acutomanguinii sp. nov., P. antarcticum sp. nov., P. mannensianum sp. nov. and P. hodgsonii Van de Vijver et Verleyen sp. nov., whereas the former variety elliptica is brought to species level: P. ellipticomanguinii nom. et stat. nov. The morphology, ecology and distribution of all species are discussed and a morphological comparison is made.
manguinii沙霉是南极地区湖泊硅藻群落的常见组成部分。该物种在一些形态和形态计量特征上表现出广泛的变异性,如瓣膜轮廓、瓣膜宽度、条纹图案和长宽比。对Hustedt于1952年描述的芒果Achnanthes manguinii和Manguin两年后描述的芒果A.elliptica的类型材料进行分析,并对来自亚南极地区的大量芒果P.种群进行分析(样本来自南大西洋、印度洋和太平洋的所有主要岛屿),对该物种进行了明确的形态学修正。描述了四个新物种,尖柄扁蝶(P.acutomanguinii sp.nov.)、南极扁蝶(P.antarcticum sp.nov..)、甘露扁蝶(P.mannensianum sp.nov.。et stat.nov.讨论了所有物种的形态、生态学和分布,并进行了形态比较。
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引用次数: 5
Three new freshwater species of the genus Achnanthidium (Bacillariophyta, Achnanthidiaceae) from Taiping Lake, China 太平湖阿胶属三新种(硅藻门,阿胶科)
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2019-04-01 DOI: 10.5507/FOT.2018.015
P. Yu, Q. You, J. Kociolek, Quanxi Wang
We describe three new Achnanthidium species, A. lacustre sp. nov., A. sublanceolatum sp. nov., and A. taipingensis sp. nov., from Taiping Lake, Anhui Province (China) based on light and scanning electron microscopy. A. lacustre sp. nov. belongs to the "A. minutissimum complex" of the genus, based on it having straight external distal raphe fissures and round to elliptical areolae. Both A. sublanceolatum sp. nov., and A. taipingensis sp. nov. belong to the "A. pyrenaicum complex" of the genus, based on them having transpically-elongated areolae and deflected external distal raphe fissures. All three species are sufficiently different from other similar species based on valve outline, shape of the axial and center areas, and striae density. These three new species are all observed in benthic collections from Taiping Lake.
基于光镜和扫描电子显微镜,我们描述了来自安徽省太平湖的三个新的Achnanthidium物种,A.lacustre sp.nov.,A.sublanceolatum sp.nov..和A.tapingsis sp.novs。A.lacustre sp.nov.属于该属的“A.minutissimum复合体”,因为它有直的外部中缝远端裂隙和圆形到椭圆形的乳晕。A.sublanceolatum sp.nov.和A.tapingsis sp.nov..都属于该属的“A.pyrenaium复合体”,因为它们具有透明细长的乳晕和偏斜的中缝远端外部裂隙。根据瓣膜轮廓、轴向和中心区域的形状以及条纹密度,这三种物种与其他类似物种有很大的不同。这三个新物种都是在太平湖的底栖生物群落中观察到的。
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引用次数: 17
Taxonomic transfer of Gongrosira fluminensis Fritsch (Chaetophorales, Chlorophyceae) to Lithotrichon Darienko et Pröschold (Ulvales, Ulvophyceae) based on morphological observation and phylogenetic analyses 基于形态学观察和系统发育分析的河松(Chaetophorales,Chlorphyceae)向石松Darienko et Pröschold(Ulvales,Ulvohyceae)的分类转移
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2019-04-01 DOI: 10.5507/FOT.2018.014
Benwen Liu, Qinghua Wang, Shuyin Li, Jiao Fang, Guoxiang Liu, Zhengyu Hu
One green algal specimen from China was identified as Gongrosira fluminensis Fritsch, due to its unique morphology that pseudoparenchymal basal stratum with rounded or polygonal cells grew into dense little-branched upright threads that reached approximately the same height with specific akinete formation and germination and formed strong cushions without calcification. Examination of the ultrastructural characteristics of plasmodesmata and pyrenoid confirmed that Gongrosira fluminensis Fritsch should be excluded from the order Chaetophorales. The phylogenetic evidence based on DNA sequence data from the nucleus (18S rDNA, ITS rDNA) and chloroplast (tufA) sequences clearly revealed that the Gongrosira fluminensis Fritsch should be classified in the Ulvales (Ulvophyceae) as the new combination species of the genus Lithotrichon Darienko et Proschold, instead of the Chaetophorales (Chlorophyceae). More specimens in conjunction with natural morphological investigation and molecular analyses are required to reevaluate the microfilamentous genus Gongrosira Kutzing and reveal hidden diversities among the Ulvophyceae.
一个来自中国的绿藻标本被鉴定为河珙桐,因为其独特的形态,具有圆形或多边形细胞的假实质基底层生长成密集的小分支直立线,与特定的秋叶形成和发芽高度大致相同,并形成坚固的无钙化垫。对胞间连丝和蛋白核的超微结构特征的研究证实,河珙桐应被排除在Chaetophorales目之外。基于细胞核DNA序列(18S rDNA、ITS rDNA)和叶绿体(tufA)序列的系统发育证据清楚地表明,河珙桐应被归类于Ulvales(Ulvophyceae),而不是Chaetophorales(Chlorphyceae。需要更多的标本,结合自然形态调查和分子分析,以重新评估微丝属Kutzing,并揭示Ulvophyceae之间隐藏的多样性。
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引用次数: 7
On some common and new cavum-bearing Planothidium (Bacillariophyta) species from freshwater 淡水中几种常见和新的带腔Planothidium(Bacillarophyta)物种的研究
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2019-04-01 DOI: 10.5507/FOT.2018.016
C. E. Wetzel, B. Vijver, S. Blanco, L. Ector
Thirteen Planothidium species are illustrated and discussed in a detailed morphological account based on light and scanning electron microscopy analysis of modern and historic materials related to the names Planothidium rostratum (Ostrup) Lange-Bertalot and Planothidium frequentissimum (Lange-Bertalot) Lange-Bertalot. Eight species from freshwater environments in Europe, Asia and South America are proposed as new. All taxa here discussed and illustrated belong to the group of species characterized by the presence of a cavum in the rapheless valve. Additional information concerning their distribution and ecology is briefly commented based on a thorough literature revision.
基于对Planothidium rostratum (Ostrup) Lange-Bertalot和Planothidium frequentissimum (Lange-Bertalot) Lange-Bertalot相关的现代和历史材料的光学和扫描电子显微镜分析,对13种Planothidium物种进行了详细的形态学说明和讨论。来自欧洲、亚洲和南美洲淡水环境的8种被列为新物种。这里讨论和说明的所有分类群都属于以无瓣瓣中存在腔为特征的种群。关于它们的分布和生态的其他信息简要评论基于彻底的文献修订。
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引用次数: 13
Quadricoccopsis gen. nov., a new genus of Quadricoccus-like algae in Oocystaceae from China (Trebouxiophyceae, Chlorophyta) 中国乌囊藻科似四角藻属的一个新属——新一代四角藻(Treexiphyceae,Chlorphyta)
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2018-11-01 DOI: 10.5507/FOT.2018.005
Xudong Liu, Huan Zhu, Huiyin Song, Benwen Liu, Qinghua Wang, Guoxiang Liu, Zhengyu Hu
Members of Quadricoccus-like algae are characterized by oval to ellipsoid cells adherent to the bowl-shaped or stretched, empty mother cell walls and are common in phytoplankton of inland waters. To date, the morphologically similar genera Quadricoccus and Lobocystis are accepted for this group and the former had been phylogenetic positioned in Oocystaceae. In this study, seven strains of Quadricoccus-like algae were identified and successfully cultured in the laboratory. Light and electron microscope observations and phylogenetic analysis revealed that the strains represent three different species within a new genus, described here as Quadricoccopsis gen. nov. It differed from genus Quadricoccus by characteristically cell adherent mode that two pairs of daughter cells connected to the mother cell remnant respectively by the pole and median portion and distinguished from Lobocystis by variable 2-4-8 autospores, characteristically cell adherent mode and only found in limnetic water. The three new species, described here as Q. simplex, Q. parva and Q. glomerata, differed in cell size, colony morphology and autospore number. Phylogenetic analysis revealed the genus Quadricoccopsis in Oocystaceae and a close relationship with Oocystidium, which is far away from the phylogenetic position of Quadricoccus in one of the granulated clades. The Quadricoccus-like algae were, therefore, proved to be a paraphyly. Furthermore, apart from Planctonema-like algae, the Oocystaceae characteristic cell wall ultrastructure, which is multi-layered with cellulose fibrils in each layer perpendicular to those of the adjoining layer, is not shown again in genus Quadricoccopsis. Different cell wall substructures may be related to the colony formation mechanism. Whether the ultrastructure criterion is applied to all the Oocystaceae needs to be re-evaluated and, further, the definition of this family should be discussed.
四轴藻类藻类的特点是卵形到椭球状的细胞附着在碗状或拉伸的空母细胞壁上,在内陆水域的浮游植物中很常见。迄今为止,在形态上相似的Quadricoccus属和Lobocystis属被认为是这一类群,前者在系统发育上被定位在卵囊科。本研究鉴定了7株Quadricoccus-like algae,并在实验室成功培养。光镜、电镜观察和系统发育分析表明,这些菌株代表了一个新属中的三个不同种,这里称之为Quadricoccopsis gen. 11 .它与Quadricoccus属的区别在于两对子细胞分别通过极部和中部与母细胞残体连接的典型细胞贴壁模式,与Lobocystis属的区别在于变异的2-4-8常孢子。典型的细胞贴壁模式,只存在于海水中。这三个新种在细胞大小、菌落形态和自孢子数量上均存在差异,分别为单纯性棉球、小棉球和小球棉球。系统发育分析表明,Quadricoccopsis属属于卵囊科,与卵囊门亲缘关系较近,距离Quadricoccus在粒化分支中的系统发育位置较远。因此,这种类四角藻被证明是一种纲藻。此外,除了类似planctonoma的藻类外,卵囊科的细胞壁超微结构是多层的,每层纤维素原纤维与相邻层垂直,在Quadricoccopsis属中没有再次显示。细胞壁亚结构的不同可能与菌落形成机制有关。超微结构标准是否适用于所有卵囊科,需要重新评估,并进一步讨论这个科的定义。
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引用次数: 7
Evolutionary relationships between the varieties of green algae Pediastrum boryanum and P. duplex s.l. (Chlorophyceae, Hydrodictyaceae) 绿藻Pediastrom boryanum和P.duplex s.l.(绿藻科、水藻科)品种的进化关系
IF 2.2 3区 生物学 Q3 PLANT SCIENCES Pub Date : 2018-11-01 DOI: 10.5507/FOT.2018.004
J. Lenarczyk, M. Saługa
The infraspecific relationships of the two most variable species, Pediastrum boryanum and P. duplex s.l. identified on the basis of morphological criteria, have been poorly studied so far. The present study focused on 12 original strains isolated from Polish water bodies and 29 strains from the GenBank database, which represent P. boryanum, P. duplex s.l. varieties and other morphologically similar taxa, against the background of 14 other strains of the family Hydrodictyaceae. In order to estimate the level of congruence between the phylogeny and the classical taxonomic system based on morphological criteria, the strains of P. boryanum and P. duplex s.l., and other morphologically similar taxa were subjected to parallel phylogenetic analyses applying Bayesian and Maximum Likelihood methods to combined molecular data (26S rDNA and rbcL cpDNA) and morphological analyses based on light and scanning electron microscopy, and iconographic documentation of almost all strains published elsewhere. The gene topologies revealed many discrepancies in the morphological features used to delimit the analysed taxa. The polyphyly of both P. boryanum and P. duplex s.l. was confirmed. Pseudopediastrum boryanum var. cornutum (formerly P. boryanum var. cornutum) formed a well supported monophyletic clade, whereas other varieties, including var. boryanum, brevicorne and longicorne, proved to be complex taxa. Previous description of Lacunastrum gracillimum (formerly P. duplex var. gracillimum) was well supported. A clade composed mostly of European strains identified as P. duplex var. rugulosum should be regarded as this taxon, whereas clades containing strains exhibiting P. duplex var. rugulosum-like morphology represent new taxa. Taxonomical changes within both P. boryanum and P. duplex s.l. are required on the basis of a higher number of strains and detailed morphometric data.
迄今为止,根据形态学标准鉴定的两个最具变异性的物种——紫藤和双相紫藤的种下关系研究很少。本研究的重点是从波兰水体中分离的12个原始菌株和GenBank数据库中的29个菌株,它们代表了P.boryanum、P.duplex s.l.变种和其他形态相似的分类群,背景是Hydrodictyaceae科的其他14个菌株。为了估计系统发育与基于形态学标准的经典分类系统之间的一致性水平。,和其他形态相似的分类群应用贝叶斯和最大似然方法对组合分子数据(26S rDNA和rbcL-cpDNA)进行平行系统发育分析,并基于光学和扫描电子显微镜进行形态学分析,以及其他地方发表的几乎所有菌株的图像学文献。基因拓扑结构揭示了用于界定所分析分类群的形态学特征的许多差异。硼杨和双链杨的多聚性得到了证实。boryanum var.cornutum(原P.boryanum var.conutum)形成了一个得到充分支持的单系分支,而其他品种,包括boryanum、短角和长角,被证明是复杂的分类群。先前对Gracillium Lacunastrum(原P.duplex var.gracilium)的描述得到了很好的支持。一个主要由欧洲菌株组成的分支,被鉴定为P.duplex var.rugulosum,应被视为该分类单元,而包含表现出P.duplexvar.rugoulsum样形态的菌株的分支代表了新的分类单元。在更高数量的菌株和详细的形态计量数据的基础上,需要对紫草和双链紫草的分类进行改变。
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引用次数: 9
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