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The interplay between retinoic acid binding proteins and retinoic acid degrading enzymes in modulating retinoic acid concentrations. 视黄酸结合蛋白和视黄酸降解酶在调节视黄酸浓度方面的相互作用。
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2024-10-24 DOI: 10.1016/bs.ctdb.2024.09.001
Nina Isoherranen, Yue Winnie Wen

The active metabolite of vitamin A, all-trans-retinoic acid (atRA), is critical for maintenance of many cellular processes. Although the enzymes that can synthesize and clear atRA in mammals have been identified, their tissue and cell-type specific roles are still not fully established. Based on the plasma protein binding, tissue distribution and lipophilicity of atRA, atRA partitions extensively to lipid membranes and other neutral lipids in cells. As a consequence, free atRA concentrations in cells are expected to be exceedingly low. As such mechanisms must exist that allow sufficiently high atRA concentrations to occur for binding to retinoic acid receptor (RARs) and for RAR mediated signaling. Kinetic simulations suggest that cellular retinoic acid binding proteins (CRABPs) provide a cytosolic reservoir for atRA to allow high enough cytosolic concentrations that enable RAR signaling. Yet, the different CRABP family members CRABP1 and CRABP2 may serve different functions in this context. CRABP1 may reside in the cytosol as a member of a cytosolic signalosome and CRABP2 may bind atRA in the cytosol and localize to the nucleus. Both CRABPs appear to interact with the atRA-degrading cytochrome P450 (CYP) family 26 enzymes in the endoplasmic reticulum. These interactions, together with the expression levels of the CRABPs and CYP26s, likely modulate cellular atRA concentration gradients and tissue atRA concentrations in a tightly coordinated manner. This review provides a summary of the current knowledge of atRA distribution, metabolism and protein binding and how these characteristics may alter tissue atRA concentrations.

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引用次数: 0
Satellite cells in the growth and maintenance of muscle. 卫星细胞在肌肉生长和维持过程中的作用。
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-02-15 DOI: 10.1016/bs.ctdb.2024.01.020
John F Bachman, Joe V Chakkalakal

Embryonic skeletal muscle growth is contingent upon a population of somite derived satellite cells, however, the contribution of these cells to early postnatal skeletal muscle growth remains relatively high. As prepubertal postnatal development proceeds, the activity and contribution of satellite cells to skeletal muscle growth diminishes. Eventually, at around puberty, a population of satellite cells escapes terminal commitment, continues to express the paired box transcription factor Pax7, and reside in a quiescent state orbiting the myofiber periphery adjacent to the basal lamina. After adolescence, some satellite cell contributions to muscle maintenance and adaptation occur, however, their necessity is reduced relative to embryonic, early postnatal, and prepubertal growth.

胚胎骨骼肌的生长依赖于体节衍生的卫星细胞群,然而,这些细胞对出生后早期骨骼肌生长的贡献仍然相对较高。随着青春期前的产后发育,卫星细胞的活性和对骨骼肌生长的贡献逐渐减弱。最终,在青春期前后,一部分卫星细胞摆脱了终末承诺,继续表达配对盒转录因子 Pax7,并以静止状态驻留在基底层附近的肌纤维外围。青春期后,卫星细胞对肌肉的维持和适应做出了一些贡献,但与胚胎期、出生后早期和青春期前的生长相比,其必要性有所降低。
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引用次数: 0
Muscle stem cells as immunomodulator during regeneration. 肌肉干细胞作为再生过程中的免疫调节剂
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-02-15 DOI: 10.1016/bs.ctdb.2024.01.010
H Rex Xu, Victor V Le, Stephanie N Oprescu, Shihuan Kuang

The skeletal muscle is well known for its remarkable ability to regenerate after injuries. The regeneration is a complex and dynamic process that involves muscle stem cells (also called muscle satellite cells, MuSCs), fibro-adipogenic progenitors (FAPs), immune cells, and other muscle-resident cell populations. The MuSCs are the myogenic cell populaiton that contribute nuclei directly to the regenerated myofibers, while the other cell types collaboratively establish a microenvironment that facilitates myogenesis of MuSCs. The myogenic process includes activation, proliferation and differentiationof MuSCs, and subsequent fusion their descendent mononuclear myocytes into multinuclear myotubes. While the contributions of FAPs and immune cells to this microenvironment have been well studied, the influence of MuSCs on other cell types remains poorly understood. This review explores recent evidence supporting the potential role of MuSCs as immunomodulators during muscle regeneration, either through cytokine production or ligand-receptor interactions.

众所周知,骨骼肌在受伤后具有非凡的再生能力。再生是一个复杂而动态的过程,涉及肌肉干细胞(又称肌肉卫星细胞,MuSCs)、纤维脂肪生成祖细胞(FAPs)、免疫细胞和其他肌肉驻留细胞群。MuSCs是直接为再生肌纤维提供细胞核的肌生成细胞群,而其他类型的细胞则共同建立了促进MuSCs肌生成的微环境。成肌过程包括MuSCs的活化、增殖和分化,以及随后其后代单核肌细胞融合成多核肌管。虽然 FAPs 和免疫细胞对这种微环境的贡献已被深入研究,但 MuSCs 对其他细胞类型的影响仍鲜为人知。这篇综述探讨了最近支持造血干细胞在肌肉再生过程中通过细胞因子产生或配体-受体相互作用发挥免疫调节作用的证据。
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引用次数: 0
Macrophage lineages in heart development and regeneration. 心脏发育和再生过程中的巨噬细胞系
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-02-24 DOI: 10.1016/bs.ctdb.2024.01.004
Na Xu, Brittany A Gonzalez, Katherine E Yutzey

During development, macrophage subpopulations derived from hematopoietic progenitors take up residence in the developing heart. Embryonic macrophages are detectable at the early stages of heart formation in the nascent myocardium, valves and coronary vasculature. The specific subtypes of macrophages present in the developing heart reflect the generation of hematopoietic progenitors in the yolk sac, aorta-gonad-mesonephros, fetal liver, and postnatal bone marrow. Ablation studies have demonstrated specific requirements for embryonic macrophages in valve remodeling, coronary and lymphatic vessel development, specialized conduction system maturation, and myocardial regeneration after neonatal injury. The developmental origins of macrophage lineages change over time, with embryonic lineages having more reparative and remodeling functions in comparison to the bone marrow derived myeloid lineages of adults. Here we review the contributions and functions of cardiac macrophages in the developing heart with potential regenerative and reparative implications for cardiovascular disease.

在发育过程中,来自造血祖细胞的巨噬细胞亚群会在发育中的心脏中定居。在心脏形成的早期阶段,新生心肌、瓣膜和冠状血管中就能检测到胚胎巨噬细胞。发育中心脏中巨噬细胞的特定亚型反映了造血祖细胞在卵黄囊、主动脉-性腺-肾上腺、胎儿肝脏和出生后骨髓中的生成情况。消融研究表明,在瓣膜重塑、冠状动脉和淋巴管发育、特殊传导系统成熟和新生儿损伤后心肌再生中,对胚胎巨噬细胞有特殊要求。巨噬细胞系的发育起源会随着时间的推移而改变,与成人骨髓衍生的髓系相比,胚胎系具有更多的修复和重塑功能。在此,我们回顾了心脏巨噬细胞在心脏发育过程中的贡献和功能,以及对心血管疾病的潜在再生和修复意义。
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引用次数: 0
The cardiac conduction system: History, development, and disease. 心脏传导系统:历史、发展和疾病。
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-03-06 DOI: 10.1016/bs.ctdb.2024.02.006
Carissa Lee, Sidra Xu, Tahmina Samad, William R Goodyer, Alireza Raissadati, Paul Heinrich, Sean M Wu

The heart is the first organ to form during embryonic development, establishing the circulatory infrastructure necessary to sustain life and enable downstream organogenesis. Critical to the heart's function is its ability to initiate and propagate electrical impulses that allow for the coordinated contraction and relaxation of its chambers, and thus, the movement of blood and nutrients. Several specialized structures within the heart, collectively known as the cardiac conduction system (CCS), are responsible for this phenomenon. In this review, we discuss the discovery and scientific history of the mammalian cardiac conduction system as well as the key genes and transcription factors implicated in the formation of its major structures. We also describe known human diseases related to CCS development and explore existing challenges in the clinical context.

心脏是胚胎发育过程中最先形成的器官,它建立了维持生命和下游器官形成所需的循环基础设施。心脏功能的关键在于其启动和传播电脉冲的能力,电脉冲可使心腔协调收缩和舒张,从而实现血液和营养物质的流动。心脏内的几个专门结构(统称为心脏传导系统(CCS))负责这一现象。在这篇综述中,我们将讨论哺乳动物心脏传导系统的发现和科学史,以及与其主要结构的形成有关的关键基因和转录因子。我们还描述了与 CCS 发展相关的已知人类疾病,并探讨了临床方面的现有挑战。
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引用次数: 0
The genetics of cardiomyocyte polyploidy. 心肌细胞多倍体的遗传学。
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-02-06 DOI: 10.1016/bs.ctdb.2024.01.008
Tyler Buddell, Alexandra L Purdy, Michaela Patterson

The regulation of ploidy in cardiomyocytes is a complex and tightly regulated aspect of cardiac development and function. Cardiomyocyte ploidy can range from diploid (2N) to 8N or even 16N, and these states change during key stages of development and disease progression. Polyploidization has been associated with cellular hypertrophy to support normal growth of the heart, increased contractile capacity, and improved stress tolerance in the heart. Conversely, alterations to ploidy also occur during cardiac pathogenesis of diseases, such as ischemic and non-ischemic heart failure and arrhythmia. Therefore, understanding which genes control and modulate cardiomyocyte ploidy may provide mechanistic insight underlying cardiac growth, regeneration, and disease. This chapter summarizes the current knowledge regarding the genes involved in the regulation of cardiomyocyte ploidy. We discuss genes that have been directly tested for their role in cardiomyocyte polyploidization, as well as methodologies used to identify ploidy alterations. These genes encode cell cycle regulators, transcription factors, metabolic proteins, nuclear scaffolding, and components of the sarcomere, among others. The general physiological and pathological phenotypes in the heart associated with the genetic manipulations described, and how they coincide with the respective cardiomyocyte ploidy alterations, are further discussed in this chapter. In addition to being candidates for genetic-based therapies for various cardiac maladies, these genes and their functions provide insightful evidence regarding the purpose of widespread polyploidization in cardiomyocytes.

心肌细胞倍性的调节是心脏发育和功能的一个复杂而严格的方面。心肌细胞倍性的范围从二倍体(2N)到 8N 甚至 16N,这些状态在发育和疾病进展的关键阶段会发生变化。多倍体化与细胞肥大有关,可支持心脏的正常生长、增强收缩能力并改善心脏的应激耐受性。相反,倍性的改变也发生在心脏疾病的发病过程中,如缺血性和非缺血性心力衰竭和心律失常。因此,了解哪些基因可控制和调节心肌细胞倍性,可从机理上揭示心脏生长、再生和疾病的根本原因。本章总结了目前有关参与调控心肌细胞倍性的基因的知识。我们讨论了已直接检测其在心肌细胞多倍体化中作用的基因,以及用于鉴定多倍体改变的方法。这些基因编码细胞周期调节因子、转录因子、代谢蛋白、核支架和肌节成分等。本章将进一步讨论与所述基因操作相关的心脏一般生理和病理表型,以及这些表型如何与相应的心肌细胞倍性改变相吻合。这些基因及其功能除了可作为治疗各种心脏疾病的基因疗法的候选基因外,还为心肌细胞广泛多倍体化的目的提供了深刻的证据。
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引用次数: 0
Organizing activities of axial mesoderm. 轴突中胚层的组织活动
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-03-15 DOI: 10.1016/bs.ctdb.2024.02.007
Elizabeth Manning, Marysia Placzek

For almost a century, developmental biologists have appreciated that the ability of the embryonic organizer to induce and pattern the body plan is intertwined with its differentiation into axial mesoderm. Despite this, we still have a relatively poor understanding of the contribution of axial mesoderm to induction and patterning of different body regions, and the manner in which axial mesoderm-derived information is interpreted in tissues of changing competence. Here, with a particular focus on the nervous system, we review the evidence that axial mesoderm notochord and prechordal mesoderm/mesendoderm act as organizers, discuss how their influence extends through the different axes of the developing organism, and describe how the ability of axial mesoderm to direct morphogenesis impacts on its role as a local organizer.

近一个世纪以来,发育生物学家已经认识到,胚胎组织器诱导和塑造身体形态的能力与其向轴中胚层分化的过程密不可分。尽管如此,我们对轴中胚层对不同身体区域的诱导和模式化的贡献,以及轴中胚层衍生的信息在能力不断变化的组织中的诠释方式,仍然知之甚少。在这里,我们以神经系统为重点,回顾了轴中胚层脊索和前脊索中胚层/中胚层作为组织者的证据,讨论了它们的影响如何通过发育中生物体的不同轴延伸,并描述了轴中胚层指导形态发生的能力如何影响其作为局部组织者的作用。
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引用次数: 0
Role of microenvironment on muscle stem cell function in health, adaptation, and disease. 微环境在健康、适应和疾病中对肌肉干细胞功能的作用
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-03-13 DOI: 10.1016/bs.ctdb.2024.02.002
Daniel Helzer, Pranav Kannan, Joseph C Reynolds, Devin E Gibbs, Rachelle H Crosbie

The role of the cellular microenvironment has recently gained attention in the context of muscle health, adaption, and disease. Emerging evidence supports major roles for the extracellular matrix (ECM) in regeneration and the dynamic regulation of the satellite cell niche. Satellite cells normally reside in a quiescent state in healthy muscle, but upon muscle injury, they activate, proliferate, and fuse to the damaged fibers to restore muscle function and architecture. This chapter reviews the composition and mechanical properties of skeletal muscle ECM and the role of these factors in contributing to the satellite cell niche that impact muscle regeneration. In addition, the chapter details the effects of satellite cell-matrix interactions and provides evidence that there is bidirectional regulation affecting both the cellular and extracellular microenvironment within skeletal muscle. Lastly, emerging methods to investigate satellite cell-matrix interactions will be presented.

最近,细胞微环境在肌肉健康、适应和疾病方面的作用越来越受到关注。新的证据支持细胞外基质(ECM)在再生和卫星细胞龛的动态调节中发挥重要作用。卫星细胞在健康肌肉中通常处于静止状态,但当肌肉受伤时,它们会激活、增殖并与受损纤维融合,以恢复肌肉功能和结构。本章回顾了骨骼肌 ECM 的组成和机械特性,以及这些因素在形成影响肌肉再生的卫星细胞生态位中的作用。此外,本章还详细介绍了卫星细胞-基质相互作用的影响,并提供证据表明骨骼肌内的细胞和细胞外微环境存在双向调节作用。最后,将介绍研究卫星细胞-基质相互作用的新方法。
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引用次数: 0
The control of transitions along the main body axis. 控制沿主体轴线的过渡。
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2023-12-06 DOI: 10.1016/bs.ctdb.2023.11.002
Anastasiia Lozovska, Artemis G Korovesi, Patricia Duarte, Ana Casaca, Tereza Assunção, Moises Mallo

Although vertebrates display a large variety of forms and sizes, the mechanisms controlling the layout of the basic body plan are substantially conserved throughout the clade. Following gastrulation, head, trunk, and tail are sequentially generated through the continuous addition of tissue at the caudal embryonic end. Development of each of these major embryonic regions is regulated by a distinct genetic network. The transitions from head-to-trunk and from trunk-to-tail development thus involve major changes in regulatory mechanisms, requiring proper coordination to guarantee smooth progression of embryonic development. In this review, we will discuss the key cellular and embryological events associated with those transitions giving particular attention to their regulation, aiming to provide a cohesive outlook of this important component of vertebrate development.

虽然脊椎动物的形态和大小千差万别,但控制基本身体布局的机制在整个类群中基本保持不变。胚胎发育后,头部、躯干和尾部通过在胚胎尾端不断增加的组织依次形成。每个主要胚胎区域的发育都受到不同遗传网络的调控。因此,从头部到躯干和从躯干到尾部的发育过程涉及调控机制的重大变化,需要适当的协调才能保证胚胎发育的顺利进行。在这篇综述中,我们将讨论与这些过渡相关的关键细胞和胚胎学事件,并特别关注它们的调控,旨在为脊椎动物发育的这一重要组成部分提供一个连贯的视角。
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引用次数: 0
RNA binding proteins in cardiovascular development and disease. 心血管发育和疾病中的 RNA 结合蛋白
2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-03-15 DOI: 10.1016/bs.ctdb.2024.01.007
Sunil K Verma, Muge N Kuyumcu-Martinez

Congenital heart disease (CHD) is the most common birth defect affecting>1.35 million newborn babies worldwide. CHD can lead to prenatal, neonatal, postnatal lethality or life-long cardiac complications. RNA binding protein (RBP) mutations or variants are emerging as contributors to CHDs. RBPs are wizards of gene regulation and are major contributors to mRNA and protein landscape. However, not much is known about RBPs in the developing heart and their contributions to CHD. In this chapter, we will discuss our current knowledge about specific RBPs implicated in CHDs. We are in an exciting era to study RBPs using the currently available and highly successful RNA-based therapies and methodologies. Understanding how RBPs shape the developing heart will unveil their contributions to CHD. Identifying their target RNAs in the embryonic heart will ultimately lead to RNA-based treatments for congenital heart disease.

先天性心脏病(CHD)是最常见的出生缺陷,影响着全球 135 万以上的新生儿。先天性心脏病可导致产前、新生儿、产后死亡或终身心脏并发症。RNA结合蛋白(RBP)突变或变异正在成为CHD的诱因。RBP 是基因调控的奇才,是 mRNA 和蛋白质景观的主要贡献者。然而,人们对发育中的心脏中的 RBPs 及其对 CHD 的贡献知之甚少。在本章中,我们将讨论我们目前对与 CHD 有关的特定 RBPs 的了解。我们正处于一个激动人心的时代,可以利用目前可用且非常成功的基于 RNA 的疗法和方法来研究 RBPs。了解 RBPs 如何塑造发育中的心脏将揭示它们对 CHD 的贡献。确定它们在胚胎心脏中的靶 RNA 将最终导致基于 RNA 的先天性心脏病治疗方法。
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引用次数: 0
期刊
Current Topics in Developmental Biology
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