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Memories of a young student: the early days of splicing regulation with François Gros. 一个年轻学生的回忆:与弗朗索瓦-格罗斯(François Gros)一起研究拼接调节的早期阶段。
IF 0.7 4区 生物学 Q4 BIOLOGY Pub Date : 2024-03-29 DOI: 10.5802/crbiol.138
Domenico Libri

I joined the laboratory of François Gros as a young student in the mid-1980s and worked on the characterization of the β-tropomyosin gene in chicken and the regulation of alternative splicing of its transcript, under the supervision of Marc Fiszman. In particular, I was interested in how secondary structures of the RNA influence the recognition of exons specifically used in muscle cells. I will recall a few memories on how interacting with François on this project shaped my perception of the scientific process and of the relationships between models and data. Later I worked on many aspects of RNA biology, from transcription to mRNP biogenesis and non-coding RNAs.

20 世纪 80 年代中期,我作为一名年轻学生加入弗朗索瓦-格罗斯(François Gros)实验室,在马克-费兹曼(Marc Fiszman)的指导下,研究鸡的β-肌球蛋白基因特征及其转录本替代剪接的调控。我尤其感兴趣的是,RNA 的二级结构如何影响肌肉细胞中专门使用的外显子的识别。在这个项目中,我与弗朗索瓦的互动影响了我对科学过程以及模型和数据之间关系的认识。后来,我研究了 RNA 生物学的许多方面,从转录到 mRNP 生物发生和非编码 RNA。
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引用次数: 0
[François Gros: a leading figure, a secretive man]. [弗朗索瓦-格罗斯:领袖人物,神秘人物]。
IF 2 4区 生物学 Q4 BIOLOGY Pub Date : 2024-03-29 DOI: 10.5802/crbiol.142
Benoît Robert

I joined François Gros' laboratory in 1975, to study mechanisms of gene expression in eukaryotes. Despite the lack of powerful tools, that would be brought later by genetic engineering, I obtained publishable results and was allowed to defend a third cycle thesis. Thereafter, I joined Margaret Buckingham's group, which was empowering within François' laboratory. I maintained regular meetings with François, a leading figure but a secretive man, who did not readily open up. It was my privilege, over the more than 45 years I have been around him, to have glimpses over what had been really significant to him. This has been a rich and very precious experience.

1975 年,我加入弗朗索瓦-格罗斯(François Gros)的实验室,研究真核生物的基因表达机制。尽管当时缺乏后来由基因工程带来的强大工具,但我还是取得了可发表的成果,并获准参加第三轮论文答辩。此后,我加入了玛格丽特-白金汉(Margaret Buckingham)的小组,该小组是弗朗索瓦实验室的授权小组。我与弗朗索瓦保持着定期会面,他是一位领军人物,但却是一个神秘的人,不会轻易敞开心扉。在我与他相处的 45 年多时间里,我有幸瞥见了对他来说真正重要的东西。这是一段丰富而珍贵的经历。
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引用次数: 0
[Along the road with François]. [与弗朗索瓦同行]
IF 0.7 4区 生物学 Q4 BIOLOGY Pub Date : 2024-03-29 DOI: 10.5802/crbiol.136
Didier Montarras

It was at the Pasteur Institute, in François Gros' laboratory, that I had the opportunity to discover the world of research. An opportunity in more ways than one, first because of the nature of the subject, myogenesis, which lent itself particularly well to cellular and genetic approaches to development and differentiation in vertebrates. An opportunity also because the head of the laboratory, François Gros, who was responsible for the choice of this topic, had created an environment in which researchers could develop their projects with great confidence and freedom.

正是在巴斯德研究所弗朗索瓦-格罗斯(François Gros)的实验室里,我有机会发现了研究的世界。之所以说这是一个机会,首先是因为我的研究课题--肌生成,特别适合用细胞和遗传方法来研究脊椎动物的发育和分化。此外,实验室负责人弗朗索瓦-格罗斯(François Gros)也是一个很好的机会,他负责选择这个课题,并为研究人员创造了一个可以非常自信和自由地开展项目的环境。
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引用次数: 0
On the involvement of the second heart field in congenital heart defects. 关于先天性心脏缺陷中第二心场的参与。
IF 2 4区 生物学 Q4 BIOLOGY Pub Date : 2024-03-15 DOI: 10.5802/crbiol.151
Clara Guijarro, Robert G Kelly

Congenital heart defects (CHD) affect 1 in 100 live births and result from defects in cardiac development. Growth of the early heart tube occurs by the progressive addition of second heart field (SHF) progenitor cells to the cardiac poles. The SHF gives rise to ventricular septal, right ventricular and outflow tract myocardium at the arterial pole, and atrial, including atrial septal myocardium, at the venous pole. SHF deployment creates the template for subsequent cardiac septation and has been implicated in cardiac looping and in orchestrating outflow tract development with neural crest cells. Genetic or environmental perturbation of SHF deployment thus underlies a spectrum of common forms of CHD affecting conotruncal and septal morphogenesis. Here we review the major properties of SHF cells as well as recent insights into the developmental programs that drive normal cardiac progenitor cell addition and the origins of CHD.

每 100 个活产婴儿中就有 1 个患有先天性心脏缺陷(CHD),这是心脏发育缺陷造成的。早期心管的生长是通过第二心场(SHF)祖细胞逐渐增加到心脏两极来实现的。SHF 在动脉极产生室间隔、右心室和流出道心肌,在静脉极产生心房,包括房间隔心肌。SHF的部署为随后的心脏隔膜形成创造了模板,并与心脏循环以及与神经嵴细胞一起协调流出道的发育有关。因此,遗传或环境对 SHF 部署的干扰是影响脐带和室间隔形态发生的一系列常见先天性心脏病的基础。在此,我们回顾了SHF细胞的主要特性,以及对驱动正常心脏祖细胞添加的发育程序和CHD起源的最新见解。
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引用次数: 0
Solving an enigma in the tree of life, at the origins of teleost fishes. 解开生命之树上的一个谜团--远洋鱼类的起源。
IF 0.7 4区 生物学 Q4 BIOLOGY Pub Date : 2024-03-05 DOI: 10.5802/crbiol.150
Elise Parey, Camille Berthelot, Hugues Roest Crollius, Yann Guiguen

Tracing the phylogenetic relationships between species is one of the fundamental objectives of evolutionary biology. Since Charles Darwin's seminal work in the 19th century, considerable progress has been made towards establishing a tree of life that summarises the evolutionary history of species. Nevertheless, substantial uncertainties still remain. Specifically, the relationships at the origins of teleost fishes have been the subject of extensive debate over the last 50 years. This question has major implications for various research fields: there are almost 30,000 species in the teleost group, which includes invaluable model organisms for biomedical, evolutionary and ecological studies. Here, we present the work in which we solved this enigma. We demonstrated that eels are more closely related to bony-tongued fishes than to the rest of teleost fishes. We achieved this by taking advantage of new genomic data and leveraging innovative phylogenetic markers. Notably, in addition to traditional molecular phylogeny methods based on the evolution of gene sequences, we also considered the evolution of gene order along the DNA molecule. We discuss the challenges and opportunities that these new markers represent for the field of molecular phylogeny, and in particular the possibilities they offer for re-examining other controversial branches in the tree of life.

追踪物种之间的系统发育关系是进化生物学的基本目标之一。自 19 世纪查尔斯-达尔文的开创性工作以来,在建立概括物种进化史的生命树方面取得了长足进展。然而,仍然存在大量不确定因素。具体来说,在过去的 50 年中,远志鱼类的起源关系一直是广泛争论的主题。这个问题对各个研究领域都有重大影响:长目鱼类有近 30,000 个物种,其中包括生物医学、进化和生态学研究的宝贵模式生物。在这里,我们介绍了我们解开这一谜团的工作。我们证明,鳗鱼与骨舌鱼类的亲缘关系比与其他远洋鱼类的亲缘关系更为密切。我们利用新的基因组数据和创新的系统发育标记实现了这一目标。值得注意的是,除了基于基因序列进化的传统分子系统进化方法外,我们还考虑了 DNA 分子中基因顺序的进化。我们讨论了这些新标记对分子系统发育领域带来的挑战和机遇,特别是它们为重新审视生命树中其他有争议的分支提供的可能性。
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引用次数: 0
[Antibiotic resistance: a good example of the "one health" concept]. [抗生素耐药性:"同一健康 "理念的典范]。
IF 2 4区 生物学 Q4 BIOLOGY Pub Date : 2024-01-23 DOI: 10.5802/crbiol.139
Vincent Jarlier

Antibiotic resistance is the direct deleterious consequence of two synergistic causes linked to human activity: the massive use of antibiotics in human and animal health, which leads to the selection of the most resistant bacteria, and the spread of these selected resistant bacteria, directly by cross-transmission within human and animal populations and indirectly via the environment. The "one health" concept enables an integrated approach of the various components of the issue, linking human, animal and environmental ecosystems and their dynamics.

抗生素耐药性是与人类活动相关的两个协同原因造成的直接有害后果:在人类和动物健康中大量使用抗生素,导致筛选出耐药性最强的细菌;这些筛选出的耐药细菌直接通过在人类和动物种群中的交叉传播和间接通过环境传播。统一健康 "概念使我们能够综合处理这一问题的各个组成部分,将人类、动物和环境生态系统及其动态联系起来。
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引用次数: 0
Clonal reproduction by seed of a cultivated hybrid plant: a new perspective for small-scale rice growers. 栽培杂交植物种子的克隆繁殖:小规模水稻种植者的新视角。
IF 0.7 4区 生物学 Q4 BIOLOGY Pub Date : 2024-01-11 DOI: 10.5802/crbiol.125
Aurore Vernet, Donaldo Meynard, Emmanuel Guiderdoni

Transferring an asexual mode of reproduction by seeds (apomixis) to cultivated plants would enable clonal reproduction of heterozygous genotypes such as F1 hybrids with hybrid vigor (heterosis), facilitating their access and multiplication by small-scale growers. Although sources of apomixis and the genetic loci controlling its constituent elements have been identified in wild species, their transfer by crossing to cultivated species has so far been unsuccessful. Here, we have introduced synthetic apomixis in hybrid rice to produce a high (95-100%) frequency of clonal seeds, via the inactivation of three meiotic genes-resulting in unreduced, non-recombined gametes-and the addition of an egg cell parthenogenesis trigger. The genotype and phenotype, including grain quality, of the F1 hybrid are reproduced identically in the clonal apomictic progenies. These results make synthetic apomixis compatible with future use in agriculture.

将种子的无性繁殖模式(无性繁殖)转移到栽培植物上,可以实现杂合基因型的克隆繁殖,如具有杂交活力(异交)的 F1 杂交种,便于小规模种植者获取和繁殖。虽然在野生物种中已经确定了无花果异花授粉的来源和控制其组成元素的基因位点,但迄今为止,通过杂交将其转移到栽培物种中的做法并不成功。在这里,我们在杂交水稻中引入了人工合成的无性繁殖,通过使三个减数分裂基因失活--导致配子不还原、不重组--并添加卵细胞孤雌生殖触发器,产生了高频率(95%-100%)的克隆种子。F1 代杂交种的基因型和表型(包括谷物品质)在克隆无性繁殖后代中的复制完全相同。这些结果使人工合成无性繁殖今后可用于农业。
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引用次数: 0
Stable coding of aversive associations in medial prefrontal populations. 内侧前额叶群体对厌恶联想的稳定编码
IF 2 4区 生物学 Q4 BIOLOGY Pub Date : 2023-12-20 DOI: 10.5802/crbiol.126
Cyril Herry, Daniel Jercog

The medial prefrontal cortex (mPFC) is at the core of numerous psychiatric conditions, including fear and anxiety-related disorders. Whereas an abundance of evidence suggests a crucial role of the mPFC in regulating fear behaviour, the precise role of the mPFC in this process is not yet entirely clear. While studies at the single-cell level have demonstrated the involvement of this area in various aspects of fear processing, such as the encoding of threat-related cues and fear expression, an increasingly prevalent idea in the systems neuroscience field is that populations of neurons are, in fact, the essential unit of computation in many integrative brain regions such as prefrontal areas. What mPFC neuronal populations represent when we face threats? To address this question, we performed electrophysiological single-unit population recordings in the dorsal mPFC while mice faced threat-predicting cues eliciting defensive behaviours, and performed pharmacological and optogenetic inactivations of this area and the amygdala. Our data indicated that the presence of threat-predicting cues induces a stable coding dynamics of internally driven representations in the dorsal mPFC, necessary to drive learned defensive behaviours. Moreover, these neural population representations primary reflect learned associations rather than specific defensive behaviours, and the construct of such representations relies on the functional integrity of the amygdala.

内侧前额叶皮质(mPFC)是包括恐惧和焦虑相关疾病在内的多种精神疾病的核心。尽管有大量证据表明内侧前额叶皮质在调节恐惧行为方面起着至关重要的作用,但内侧前额叶皮质在这一过程中的确切作用尚不完全清楚。虽然单细胞水平的研究已经证明了该区域参与了恐惧处理的各个方面,如威胁相关线索的编码和恐惧表达,但系统神经科学领域日益流行的观点认为,神经元群实际上是许多综合脑区(如前额叶区域)的基本计算单位。当我们面临威胁时,mPFC 神经元群代表什么?为了解决这个问题,我们在小鼠面对威胁预示线索引起防御行为时,对背侧 mPFC 进行了电生理单细胞群记录,并对该区域和杏仁核进行了药理学和光遗传学失活。我们的数据表明,威胁预测线索的存在会诱导背侧 mPFC 中内部驱动表征的稳定编码动态,这是驱动学习到的防御行为所必需的。此外,这些神经群体表征主要反映的是学习到的联想,而不是具体的防御行为,而且这种表征的构建依赖于杏仁核功能的完整性。
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引用次数: 0
Organizing collective cell migration through guidance by followers. 通过追随者的引导组织细胞集体迁移
IF 0.7 4区 生物学 Q4 BIOLOGY Pub Date : 2023-12-14 DOI: 10.5802/crbiol.145
Arthur Boutillon

Morphogenesis, wound healing, and some cancer metastases rely on the collective migration of groups of cells. In these processes, guidance and coordination between cells and tissues are critical. While strongly adherent epithelial cells have to move collectively, loosely organized mesenchymal cells can migrate as individual cells. Nevertheless, many of them migrate collectively. This article summarizes how migratory reactions to cell-cell contacts, also called "contact regulation of locomotion" behaviors, organize mesenchymal collective cell migration. It focuses on one recently discovered mechanism called "guidance by followers", through which a cell is oriented by its immediate followers. In the gastrulating zebrafish embryo, during embryonic axis elongation, this phenomenon is responsible for the collective migration of the leading tissue, the polster, and its guidance by the following posterior axial mesoderm. Such guidance of migrating cells by followers ensures long-range coordination of movements and developmental robustness. Along with other "contact regulation of locomotion" behaviors, this mechanism contributes to organizing collective migration of loose populations of cells.

形态发生、伤口愈合和某些癌症转移都依赖于细胞群的集体迁移。在这些过程中,细胞和组织之间的引导和协调至关重要。粘附性强的上皮细胞必须集体迁移,而组织松散的间充质细胞可以作为单个细胞迁移。尽管如此,它们中的许多还是集体迁移。本文总结了细胞-细胞接触的迁移反应(也称为 "接触调节运动 "行为)是如何组织间充质细胞集体迁移的。文章重点介绍了最近发现的一种称为 "跟随者引导 "的机制,通过这种机制,细胞可由其直接跟随者确定方向。在胚胎发育的斑马鱼胚胎中,在胚胎轴伸长过程中,这种现象是主导组织--极体--集体迁移的原因,也是后续轴后部中胚层引导极体迁移的原因。这种由跟随者对迁移细胞的引导确保了运动的长程协调和发育的稳健性。这种机制与其他 "运动接触调节 "行为一起,有助于组织松散细胞群的集体迁移。
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引用次数: 0
Madeleine Gans (1920–2018) : une pionnière en génétique du développement 马德琳·甘斯(1920 - 2018):发育遗传学的先驱
4区 生物学 Q4 BIOLOGY Pub Date : 2023-11-15 DOI: 10.5802/crbiol.117-fr
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引用次数: 0
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Comptes Rendus Biologies
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