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Red mark syndrome (RMS) in farmed rainbow trout (Oncorhynchus mykiss): first report of outbreak in Peruvian Salmonid Aquaculture. 养殖虹鳟鱼(Oncorhynchus mykiss)的红纹综合征(RMS):秘鲁鲑鱼养殖中首次暴发的报告。
4区 农林科学 Q4 FISHERIES Pub Date : 2023-11-03 DOI: 10.48045/001c.88466
Y. Ortega, N. Sandoval, M. Orioles
Red Mark Syndrome (RMS) is a skin disease affecting predominantly rainbow trout and is likely caused by a Midichloria-like organism. This condition primarily affects commercially-sized fish and can cause severe chronic dermatitis, panniculitis, and myositis, ultimately resulting in significant economic losses. RMS has been reported in at least three continents, but its presence has only been confirmed in Chile within South America. Nevertheless, it continues to pose a significant threat to the aquaculture of rainbow trout. In this context, we present the first documented outbreak of RMS in Peruvian Salmonid Aquaculture.
红纹综合征(RMS)是一种主要影响虹鳟鱼的皮肤病,可能是由一种类似midichloria的生物引起的。这种情况主要影响商品大小的鱼,并可引起严重的慢性皮炎、全身炎和肌炎,最终导致重大的经济损失。据报道,RMS至少在三大洲存在,但仅在南美洲的智利被证实存在。然而,它继续对虹鳟鱼的水产养殖构成重大威胁。在这种情况下,我们提出了秘鲁鲑鱼养殖中首次记录的RMS暴发。
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引用次数: 0
Prevalence of Cyprinid herpesvirus 3 and ORF150 genomic variations in carp populations of Indonesia 鲤疱疹病毒3型和ORF150基因组变异在印度尼西亚鲤鱼种群中的流行
4区 农林科学 Q4 FISHERIES Pub Date : 2023-08-14 DOI: 10.48045/001c.84009
N. N. Fuandila, A. Lusiastuti, M. Yuhana, A. Santika, Anne-Sophie Gosselin-Grenet, E. Cherif, J. Avarre
Cyprinid herpesvirus-3 (CyHV-3) is the etiological agent of koi herpesvirus disease (KHVD) in common and koi carp farming. This highly contagious pathogen has a 295-kb genome that harbours 156 open reading frames. Recent in vitro experimental evolution studies highlighted strong dynamics of genomic structural variations (SVs), in particular in the region of ORF150, an ORF potentially involved in virus multiplication and host inflammatory response. Among these SVs, a 1363-bp deletion could be associated with a loss of virulence. The present study aimed at investigating the genomic variations in the ORF150 region, and especially the deletion, in viruses isolated from carp populations of Indonesia. A screening of 236 fish from 43 different farms revealed a high prevalence of CyHV-3 (nearly 70%), both in symptomatic and asymptomatic common carp. However, in contrast with the results obtained in vitro, long read sequencing of the ORF150 region revealed a low level of genetic variations and the absence of the 1363-pb deletion. The complex interactions between the virus, the environment and the host, particularly the immune system, probably play an important role in this reduced variability.
鲤鱼疱疹病毒3型(CyHV-3)是常见的锦鲤和鲤鱼养殖中锦鲤疱疹病毒病(KHVD)的病原。这种高度传染性的病原体有一个295kb的基因组,包含156个开放的阅读框。最近的体外实验进化研究强调了基因组结构变异(SV)的强烈动力学,特别是在ORF150区域,这是一种可能参与病毒增殖和宿主炎症反应的ORF。在这些SVs中,1363bp的缺失可能与毒力的丧失有关。本研究旨在调查从印度尼西亚鲤鱼种群中分离的病毒中ORF150区域的基因组变异,特别是缺失。对来自43个不同养殖场的236条鱼进行的筛查显示,CyHV-3在有症状和无症状的普通鲤鱼中的流行率很高(近70%)。然而,与体外获得的结果相反,ORF150区域的长读测序显示了低水平的遗传变异和1363-pb缺失的缺失。病毒、环境和宿主,特别是免疫系统之间的复杂相互作用,可能在这种变异性降低中发挥了重要作用。
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引用次数: 0
Identification of Kudoa ⁠thyrsites in Atlantic mackerel (Scomber ⁠scombrus) displaying post-mortem myoliquefaction: a case study in Scotland 鉴定大西洋鲭鱼(scober scobrus)的Kudoa - thyrses显示死后肌肉液化:苏格兰的一个案例研究
4区 农林科学 Q4 FISHERIES Pub Date : 2023-07-27 DOI: 10.48045/001c.84172
Sandra C. Soares, J. Black, D. Bradley, M. Fordyce, R. McIntosh
Atlantic mackerel (Scomber scombrus) is a very important and valuable pelagic fish in Scotland. This species is known to be one of the hosts for Kudoa thyrsites, the myxosporean agent of post-mortem myoliquefaction, known as ‘soft tissue’. To date, there have been no official reports of the parasite in Scottish waters, however, the soft tissue condition is known to be found in Scottish landed mackerel. Its impact on this fishery is therefore unknown. The present study aims to report the presence of K. thyrsites-induced post-mortem myoliquefaction in mackerel caught from Scottish waters. Four commercial-sized mackerel displaying features of soft tissue were sampled. The histopathological examination revealed areas of muscular fibre necrosis and the presence of several multivalvulid myxospores in the interstitial space between the muscular fibres and among the liquefied necrotic areas. The presence of the K. thrysites was confirmed by polymerase chain reaction (PCR) in three of the four mackerel muscle tested and showed 100% identity with K. thyrsites isolate MH899081.1.
大西洋鲭鱼(scorber scorbrus)是苏格兰一种非常重要和有价值的远洋鱼类。已知该物种是Kudoa thyrsite的宿主之一,Kudoa thyrsite是死后肌肉溶解的黏液孢子剂,被称为“软组织”。到目前为止,还没有关于苏格兰水域寄生虫的官方报道,然而,已知在苏格兰登陆的鲭鱼中发现了软组织状况。因此,它对这一渔业的影响是未知的。本研究的目的是报告在苏格兰水域捕获的鲭鱼中存在香囊胞菌诱导的死后肌肉液化。选取了四条商业大小的鲭鱼,显示软组织的特征。组织病理学检查显示肌纤维坏死区,在肌纤维之间的间隙和液化坏死区之间存在几个多瓣黏液孢子。经聚合酶链反应(PCR)证实,4份鲐鱼肌肉中有3份含有该菌,与分离物MH899081.1的同源性为100%。
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引用次数: 0
Survey on Betanodavirus in Wild Fish Species in the Turkish Coastlines of the Mediterranean Sea and Molecular Characterization: detecting different genotypes from different fish in different locations 土耳其地中海沿岸野生鱼类Betanodavirus调查及分子鉴定:从不同地点的不同鱼类中检测到不同基因型
4区 农林科学 Q4 FISHERIES Pub Date : 2023-05-26 DOI: 10.48045/001c.74914
M. Kaplan, K. Pekmez, A. Çağırgan, B. K. Tekelioglu, U. Oğuz, B. Kafa, F. Arslan, G. Kalaycı
Viral nervous necrosis is a viral disease caused by betanodavirus causing deaths and epidemics in wild or farmed sea fish, especially in juveniles. Betanodavirus has been detected in farmed European seabass and gilthead seabream in Turkey. However, there are no studies on the presence of betanodavirus in wildlife along the Turkish Mediterranean coast. This study aimed to investigate the presence of betanodavirus in wild fish along the Turkish coast of the Mediterranean and to characterize isolates using molecular tools. Hence, 400 fish belonging to 27 different wild species were caught and tested using real-time RT‒PCR. The betanodavirus genome was detected in red mullets (25/50) and garfish (2/4) and identified as RGNNV and RGNNV/SJNNV genotype, respectively according to partial genome sequencing of the RNA1 and RNA2 segments. Phylogenetic analysis showed that isolated viruses were similar to isolates collected from other parts of the Mediterranean Sea and China, India, and Japan. The results of the studies show that different genotypes are circulating in the studied region in different species. These findings indicates that more research on wildlife, both around the farm and in other regions, are needed to prevent spreading of the virus to aquaculture facilities.
病毒性神经坏死是一种由倍他氏病毒引起的病毒性疾病,在野生或养殖的海鱼中引起死亡和流行病,尤其是在幼年海鱼中。Betanodovirus已在养殖的欧洲鲈鱼和土耳其的金边鲷中检测到。然而,目前还没有关于土耳其地中海沿岸野生动物中存在倍他野戴维斯病毒的研究。本研究旨在调查地中海土耳其海岸野生鱼类中是否存在倍他野戴维斯病毒,并使用分子工具对分离株进行鉴定。因此,捕获了来自27个不同野生物种的400条鱼,并使用实时RT-PCR进行了测试。根据RNA1和RNA2片段的部分基因组测序,在红乌鱼(25/50)和garfish(2/4)中检测到倍他野病毒基因组,并分别鉴定为RGNNV和RGNNV/SJNNV基因型。系统发育分析表明,分离的病毒与从地中海其他地区以及中国、印度和日本收集的分离株相似。研究结果表明,不同的基因型在研究区域的不同物种中循环。这些发现表明,需要对农场周围和其他地区的野生动物进行更多的研究,以防止病毒传播到水产养殖设施。
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引用次数: 0
Lime application to condition soil to pH 11 controls growth of harmful vibrios and WSSV 施用石灰使土壤pH值达到11,可控制有害弧菌和WSSV的生长
4区 农林科学 Q4 FISHERIES Pub Date : 2023-05-26 DOI: 10.48045/001c.74917
E. A. Tendencia, E. Coniza
Shrimp farming has been devastated by several diseases. Disease outbreaks can be prevented by optimising environmental conditions or by eliminating risks factors including carrier organisms. These can be achieved through proper pond preparation. One important step in pond preparation is the application of hydrated lime. This paper describes the effect of hydrated lime application to condition pond soil to pH 11 on the pond ecosystem, more specifically on soil pH and biota. The experiment was done using three 600 m2 brackish water ponds. After hydrated lime application, the wet soil pH on the 1st-8th day was significantly higher (P<0.05) compared to the pH before liming to pH 11, and flushing after flooding for 24 h. Soil pH of 11 was observed 24-48h after lime application. Moreover, unwanted species like crabs and fish were found dead. Liming to pH 11 negatively affects the counts of green vibrio colonies thereby decreasing the percentage of green vibrios (PGV). In another experiment, three 750m2 earthen ponds were used. The pond soils were previously positive for the Whitespot Syndrome Virus (WSSV), hydrated lime were applied to bring the pond soil pH to 11. After lime application, WSSV was not detected in the pond soils. Results showed that increasing the soil pH to ≥11 positively affects the pond ecosystem. Liming encourages the proliferation of yellow vibrios and the eradication of carrier species (i.e. crabs) as well as predators (i.e. fish) in the ponds. Furthermore, liming to pH 11 may also eradicate White spot virus from the pond sediment. To implement a 1-unit increase in wet pH, hydrated lime should be applied at 2T/ha.
养虾业受到多种疾病的破坏。可以通过优化环境条件或消除包括携带者在内的风险因素来预防疾病爆发。这些可以通过适当的池塘准备来实现。池塘准备的一个重要步骤是应用熟石灰。本文描述了施用熟石灰将池塘土壤pH调节至11对池塘生态系统的影响,更具体地说,对土壤pH和生物群的影响。实验使用三个600m2的微咸水池进行。施用熟石灰后,第1-8天的湿土pH值显著高于施石灰前的pH值至pH值11,并在淹水24小时后冲洗。施用石灰后24-48小时,土壤pH值为11。此外,螃蟹和鱼类等不受欢迎的物种也被发现死亡。pH值降至11对绿色弧菌菌落计数产生负面影响,从而降低绿色弧菌(PGV)的百分比。在另一个实验中,使用了三个750平方米的土塘。池塘土壤先前对白斑综合征病毒(WSSV)呈阳性,施用熟石灰使池塘土壤pH值达到11。施用石灰后,在池塘土壤中未检测到WSSV。结果表明,土壤pH值≥11对池塘生态系统有积极影响。黎明鼓励黄弧菌的繁殖,根除池塘中的携带物种(即螃蟹)和捕食者(即鱼类)。此外,石灰至pH 11也可以从池塘沉积物中根除白斑病毒。为了使湿pH值增加1个单位,熟石灰的施用量应为2T/ha。
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引用次数: 0
Sea Star Wasting Disease in captive common sea stars (Asterias rubens): Examinations, therapy attempts and course of disease 圈养普通海星(Asterias rubens)的海星萎缩性疾病:检查、治疗尝试和病程
4区 农林科学 Q4 FISHERIES Pub Date : 2023-04-30 DOI: 10.48045/001c.73028
K. Grassl, J. Bauer
Sea Star Wasting Disease (SSWD) affects several wild and captive starfish species. It is generally thought to be infectious, with environmental conditions favouring its progression. Captive Asterias rubens with varying degrees of epidermal ulceration, limb autotomy and eversion of viscera were examined. Antibiotic treatments by injections and baths did not reduce mortality.
海星消瘦病(SSWD)影响几种野生和圈养海星。它通常被认为具有传染性,环境条件有利于其发展。对不同程度表皮溃疡、肢体自切和脏器外翻的圈养红尾星进行了检查。注射和沐浴的抗生素治疗并没有降低死亡率。
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引用次数: 0
A questionnaire-based survey on the presence of red mark syndrome in Italian rainbow trout (Oncorhynchus mykiss) farms 一项基于问卷的意大利虹鳟养殖场红标记综合征调查
4区 农林科学 Q4 FISHERIES Pub Date : 2023-02-27 DOI: 10.48045/001c.71292
M. Orioles, J. G. Schmidt, P. Tome, N. Vendramin, M. Galeotti
Red mark syndrome (RMS) is a widespread skin disease of rainbow trout (Oncorhynchus mykiss). Its aetiological agent is believed to be a Midichloria-like organism, an intracellular bacteria of the order Rickettsiales. RMS has been reported on several occasions, however, a comprehensive analysis of the epidemiology of this disease and its actual economic impact on the trout aquaculture industry is missing. Through a questionnaire-based survey, we estimated the prevalence of RMS and the implications of this infection on trout farms in Italy in 2020-2021. One hundred and nine farms, representing 64% (around 22,000 tons) of the total national production, were surveyed. In short, the results show that RMS in Italian farms is consistently and persistently present on Italian territory, affecting about 30% of farms. RMS is observed to have similar features to those generally described in the literature. Clinical disease is observed more often in springtime; size-wise, the most commonly affected groups are fish close to market size and fish weighing less than 100g (22% of cases). Most interestingly, the recurrence of clinical signs in the same batch of fish was observed in 64% of cases. Despite its diffusion, the disease is not perceived as a major concern in the national trout sector, mainly due to its intermittent nature, low mortality and spontaneous resolution. The main costs associated with RMS were related to antibiotic treatment and commercial downgrading; however, it was impossible to estimate the impact of these on production costs.
红纹综合征(RMS)是虹鳟(Oncorhynchus mykiss)的一种广泛的皮肤病。其病原体被认为是一种中氯类生物,一种立克次体目的细胞内细菌。RMS已在多个场合被报道,然而,缺乏对这种疾病的流行病学及其对鳟鱼养殖业的实际经济影响的全面分析。通过一项基于问卷的调查,我们估计了2020-2021年意大利鳟鱼养殖场RMS的流行率和这种感染的影响。调查了109个农场,占全国总产量的64%(约22000吨)。简言之,研究结果表明,意大利农场的RMS在意大利领土上持续存在,影响了约30%的农场。观察到RMS具有与文献中通常描述的那些相似的特征。临床疾病多见于春季;就大小而言,最常见的受影响群体是接近市场大小的鱼和体重低于100克的鱼(22%的病例)。最有趣的是,64%的病例在同一批鱼中观察到临床症状复发。尽管这种疾病已经扩散,但在国家鳟鱼部门并没有被视为一个主要问题,主要是因为它的间歇性、低死亡率和自发解决。RMS相关的主要成本与抗生素治疗和商业降级有关;然而,无法估计这些对生产成本的影响。
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引用次数: 1
Sampling artefacts in gill histology of freshwater Atlantic salmon (Salmo salar) 大西洋淡水三文鱼(Salmo salar)鳃组织学中的采样伪影
4区 农林科学 Q4 FISHERIES Pub Date : 2023-02-08 DOI: 10.48045/001c.68302
S. Mitchell, F. Scholz, M. Marcos, H. Rodger
Fish gills are delicate structures, which are vulnerable to damage from pathological as well as non-pathological aetiologies. They are frequently sampled for histology as they are involved in many recognised disease processes. Artefacts, arising from sampling techniques, can potentially interfere with interpretation of gill histology. A range of possible processes that can result in sampling artefact were assessed in a group of freshwater Atlantic salmon (Salmo salar) pre-smolts. A range of histopathologies resulted, illustrating how critical both sampling efficiency and careful tissue handling are for optimal tissue sections to enable accurate histopathological interpretation.
鱼鳃是脆弱的结构,很容易受到病理和非病理病因的损害。由于它们参与了许多公认的疾病过程,因此经常对其进行组织学取样。采样技术产生的艺术品可能会干扰鳃组织学的解释。在一组淡水大西洋鲑鱼(Salmo salar)的预繁殖中,评估了一系列可能导致采样伪像的过程。一系列组织病理学结果表明,采样效率和仔细的组织处理对于最佳组织切片以实现准确的组织病理学解释是多么重要。
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引用次数: 1
First detection of Cyclopterus lumpus virus in England, following a mortality event in farmed cleaner fish 继养殖清洁鱼死亡事件后,英国首次检测到肿眼独翼鱼病毒
4区 农林科学 Q4 FISHERIES Pub Date : 2022-12-08 DOI: 10.48045/001c.56559
M. Edwards, J. Bignell, Alexandra Papadopoulou, E. Trani, J. Savage, A. Joseph, G. Wood, D. Stone
Lumpfish are used routinely as cleaner fish to delouse farmed Atlantic salmon (Salmo salar) and are often translocated globally. In September 2021, an aquaculture production business in Dorset, England experienced considerable mortalities in consignments of lumpfish (Cyclopterus lumpus) imported from Norway. Following suspicion of infection with Cyclopterus lumpus virus (CLuV) by a veterinarian, commercial testing provided presumptive confirmation of a CLuV infection using reverse-transcription real-time polymerase chain reaction (RT-rPCR). Affected fish were later resampled by the Centre of Environment, Fisheries, and Aquaculture Science, Fish Health Inspectorate for screening of CLuV by RT-rPCR, and confirmation by conventional RT-PCR and sequence analysis. Additional samples were tested using isolation of viruses on cell cultures, bacteriology, histopathology, and PCR/rPCR techniques to investigate whether other pathogens of concern to the salmon aquaculture industry were also present. All samples tested negative for the presence of viral haemorrhagic septicaemia virus, infectious haematopoietic necrosis virus , nervous necrosis virus, infectious pancreatic necrosis virus , infectious salmon anaemia virus , ranavirus, and salmonid alphavirus. Four pools of ten samples tested positive by RT-rPCR for CLuV (Ct values between 19 and 29) and was confirmed using conventional RT-PCR. Sequence analysis showed that amplicons shared a 99.63 % match with the published sequences for CLuV. The CLuV has only recently been reported in aquatic animals and its full impact is not yet known. To the best of our knowledge this is the first report of CLuV in England.
斑鱼通常被用作清洁鱼类,以清除养殖大西洋鲑鱼(Salmo salar)的虱子,并经常在全球范围内迁移。2021年9月,英国多塞特郡的一家水产养殖生产企业从挪威进口的块状鱼(块状独眼鱼)的托运量出现了相当大的死亡。在兽医怀疑感染了结节状环翼虫病毒(CLuV)后,商业检测使用逆转录实时聚合酶链式反应(RT-rPCR)提供了CLuV感染的推定确认。受影响的鱼类随后由鱼类健康检查局环境、渔业和水产养殖科学中心重新采样,通过RT-rPCR筛查CLuV,并通过常规RT-PCR和序列分析进行确认。使用细胞培养物上的病毒分离、细菌学、组织病理学和PCR/rPCR技术对额外的样本进行了测试,以调查是否也存在三文鱼养殖业关注的其他病原体。所有样本的病毒性出血性败血症病毒、传染性造血坏死病毒、神经坏死病毒、传染性胰腺坏死病毒、感染性鲑鱼贫血病毒、ranavirus和salmonid alphavirus检测结果均为阴性。由10个样本组成的四个样本池通过RT-rPCR对CLuV检测呈阳性(Ct值在19和29之间),并使用常规RT-PCR进行确认。序列分析表明,扩增子与已发表的CLuV序列的匹配率为99.63%。CLuV最近才在水生动物中被报道,其全部影响尚不清楚。据我们所知,这是CLuV在英国的第一份报告。
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引用次数: 0
First report of puffy skin disease in farmed rainbow trout Oncorhynchus mykiss from Switzerland 瑞士养殖虹鳟鱼皮肤浮肿病首例报道
4区 农林科学 Q4 FISHERIES Pub Date : 2022-12-08 DOI: 10.48045/001c.39775
C. de Sales-Ribeiro, H. Schmidt-Posthaus, N. Diserens
Puffy skin disease (PSD) is an economically important syndrome in rainbow trout, Oncorhynchus mykiss (Walbaum, 1792). Because of its horizontal transmission, an infectious aetiology was hypothesised. However, aetiology remains unknown so far. PSD was first reported in 2002 in fish farms in England. Since then, cases have increased significantly, with additional reports in still water fisheries. Typically, the prevalence and severity of PSD increase during the summer and autumn months (13°C – 15°C). In February 2022, rainbow trout from a mountainous fish farm in Switzerland showed lethargy, inappetence, white to grey patches on the skin and slightly increased mortality. Twenty-one rainbow trout were submitted for diagnostics to the Institute for Fish and Wildlife Health, University of Bern, Switzerland. On post-mortem examination, 7/21 had up to 75% to 90% of the skin surface affected with bilateral, focally extensive white to grey, rough patches. The scales on the affected areas were raised, and the skin thickened. The histologic assessment revealed focally extensive, severe, epidermal hyperplasia with spongiosis and hydropic degeneration, severe scale pocket oedema with mild infiltration by degenerated neutrophils and lymphocytes, necrosis, and cellular debris displacing the scales. These findings are consistent with PSD. This is the first report of PSD in Switzerland. Here, contrary to previous reports, the disease occurred in rainbow trout exposed to 6-7°C water during the winter.
皮肤浮肿病(PSD)是虹鳟(Oncorhynchus mykiss)的一种重要的经济综合征(Walbaum, 1792)。由于它的水平传播,一种传染病病原学假设。然而,病因尚不清楚。PSD最早于2002年在英国的养鱼场被报道。自那时以来,病例显著增加,在静水渔场也有更多报告。通常,PSD的患病率和严重程度在夏季和秋季(13°C - 15°C)增加。2022年2月,瑞士一个山区养鱼场的虹鳟鱼表现出嗜睡、食欲不振、皮肤出现白色到灰色斑块,死亡率略有上升。21条虹鳟鱼被提交给瑞士伯尔尼大学鱼类和野生动物健康研究所进行诊断。在尸检中,7/21有高达75%至90%的皮肤表面受到影响,双侧,局部广泛的白色到灰色,粗糙斑块。患处的鳞片凸起,皮肤变厚。组织学检查显示局灶性广泛、严重的表皮增生伴海绵状和水变性,严重的鳞片袋水肿伴轻度变性中性粒细胞和淋巴细胞浸润、坏死和鳞片移位的细胞碎片。这些发现与PSD一致。这是瑞士首次报道PSD。在这里,与以前的报告相反,该疾病发生在冬季暴露于6-7°C水的虹鳟鱼中。
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引用次数: 0
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Bulletin of the European Association of Fish Pathologists
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