首页 > 最新文献

4open最新文献

英文 中文
Synopsis: Special Issue on “Disruption of signaling homeostasis induced crosstalk in the carcinogenesis paradigm Epistemology of the origin of cancer” 摘要:特刊《癌变范式中信号稳态破坏引起的串扰:癌症起源认识论》
Pub Date : 2019-01-01 DOI: 10.1051/fopen/2019023
B. Brücher, I. Jamall
It is increasingly evident that carcinogenesis, in the vast majority of cancers, cannot be explained simply through an accumulation of somatic mutations, or epigenetics, the stem cell theory, or the Warburg effect. Here, decades of thinking based on incorrect assumptions has resulted in an incorrect hypothesis on the origin of cancer. Many papers studying DNA, genetics, RNA, miRNA, proteomics, and epigenetics have increased our understanding of biology. Our paradigm, though more complex, is more reliable and plausible. It states that cancer originates from a disruption of homeostasis. This essential biological phenomenon, homeostasis, maintains the interrelationships of various signaling pathways and induced crosstalk which modify cellular functions together with the interactions of surrounding cells and structures such that the equilibrium lies towards the optimal health of the organism. This Special Issue “Disruption of signaling homeostasis induced crosstalk in the carcinogenesis paradigm Epistemology of the origin of cancer” provides compelling evidence that carcinogenesis is explained by a six-step sequence of events for the vast majority of cancers. These six steps include, (1) a pathogenic stimulus followed by (2) chronic inflammation, from which develops (3) fibrosis with associated remodeling in the cellular microenvironment. From these changes a (4) pre-cancerous niche develops which triggers the deployment of (5) a chronic stress escape strategy, and when this fails to resolve, and (6) the transition of a normal cell to a cancer cell occurs. This paradigm provides opportunities to move away from a symptom-oriented understanding of cancer and is much closer to a cause-based understanding, which opens the door for early preventative strategies to mitigate cancer as a disease, and to interdict metastases. This is underpinned by the fact that an independent recently published proof of this paradigm showed how a stimulus trigger the proposed multi-sequence cascade of events as abrupt involution-induced chronic inflammation, followed by fibrosis with remodeling, which describes the pre-cancerous niche followed by hyperplasia, metaplasia, and cancer.
越来越明显的是,在绝大多数癌症中,癌变不能简单地通过体细胞突变的积累、表观遗传学、干细胞理论或沃伯格效应来解释。在这里,几十年来基于错误假设的思考导致了对癌症起源的错误假设。许多研究DNA、遗传学、RNA、miRNA、蛋白质组学和表观遗传学的论文增加了我们对生物学的理解。我们的范式虽然更复杂,但更可靠、更可信。它指出癌症起源于体内平衡的破坏。这种基本的生物现象,即体内平衡,维持各种信号通路的相互关系和诱导的串扰,这些串扰与周围细胞和结构的相互作用一起改变细胞功能,从而使平衡处于生物体的最佳健康状态。本期特刊《癌变范式的认识论中信号稳态的破坏引起的串扰》提供了令人信服的证据,证明绝大多数癌症的癌变可以用六个步骤的事件序列来解释。这六个步骤包括:(1)病原性刺激,随后(2)慢性炎症,由此发展(3)细胞微环境中纤维化和相关的重塑。从这些变化中,(4)癌前生态位形成,触发(5)慢性应激逃逸策略的部署,当这种策略无法解决时,(6)正常细胞向癌细胞的转变就发生了。这种模式提供了摆脱以症状为导向的癌症理解的机会,更接近于以原因为基础的理解,这为早期预防策略打开了大门,以减轻癌症作为一种疾病,并阻止转移。最近发表的一项独立研究证明了这一观点,该研究表明,刺激如何引发了一系列的连锁反应,如突然的渐开式慢性炎症,随后是纤维化和重塑,这描述了癌前生态位,随后是增生、化生和癌症。
{"title":"Synopsis: Special Issue on “Disruption of signaling homeostasis induced crosstalk in the carcinogenesis paradigm Epistemology of the origin of cancer”","authors":"B. Brücher, I. Jamall","doi":"10.1051/fopen/2019023","DOIUrl":"https://doi.org/10.1051/fopen/2019023","url":null,"abstract":"It is increasingly evident that carcinogenesis, in the vast majority of cancers, cannot be explained simply through an accumulation of somatic mutations, or epigenetics, the stem cell theory, or the Warburg effect. Here, decades of thinking based on incorrect assumptions has resulted in an incorrect hypothesis on the origin of cancer. Many papers studying DNA, genetics, RNA, miRNA, proteomics, and epigenetics have increased our understanding of biology. Our paradigm, though more complex, is more reliable and plausible. It states that cancer originates from a disruption of homeostasis. This essential biological phenomenon, homeostasis, maintains the interrelationships of various signaling pathways and induced crosstalk which modify cellular functions together with the interactions of surrounding cells and structures such that the equilibrium lies towards the optimal health of the organism. This Special Issue “Disruption of signaling homeostasis induced crosstalk in the carcinogenesis paradigm Epistemology of the origin of cancer” provides compelling evidence that carcinogenesis is explained by a six-step sequence of events for the vast majority of cancers. These six steps include, (1) a pathogenic stimulus followed by (2) chronic inflammation, from which develops (3) fibrosis with associated remodeling in the cellular microenvironment. From these changes a (4) pre-cancerous niche develops which triggers the deployment of (5) a chronic stress escape strategy, and when this fails to resolve, and (6) the transition of a normal cell to a cancer cell occurs. This paradigm provides opportunities to move away from a symptom-oriented understanding of cancer and is much closer to a cause-based understanding, which opens the door for early preventative strategies to mitigate cancer as a disease, and to interdict metastases. This is underpinned by the fact that an independent recently published proof of this paradigm showed how a stimulus trigger the proposed multi-sequence cascade of events as abrupt involution-induced chronic inflammation, followed by fibrosis with remodeling, which describes the pre-cancerous niche followed by hyperplasia, metaplasia, and cancer.","PeriodicalId":6841,"journal":{"name":"4open","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89899649","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Chronic inflammation evoked by pathogenic stimulus during carcinogenesis 癌变过程中病原刺激引起的慢性炎症
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2018006
B. Brücher, I. Jamall
A pathogenic (biological or chemical) stimulus is the earliest information received by a cell that can result in the disruption of homeostasis with consequent development of disease. Chronic inflammation involves many cell types with numerous cytokines and signaling pathways, the release of different components by the cells, and the crosstalk provoked by such stimuli involving subclinical chronic inflammation and is mechanistically manifold. Exosomes secrete chemicals that trigger the epithelium to produce exosome-like nanoparticles promoting chronic inflammation. Small molecules, together with various cytokines, selectively target signaling pathways inducing crosstalk that suppress apoptosis. 16S rRNA gene sequencing has become routine to provide information on the composition and abundance of bacteria found in human tissues and in reservoirs. The deregulation of autophagy with chronic stimulation of inflammation is an early phenomenon in carcinogenesis. The disruption of cell–cell integrity enables transcellular CagA migration and triggers deregulation of autophagy with the net result being chronic inflammation. The complex and insidious nature of chronic inflammation can be seen both inside and outside the cell and even with intracellular nuclear fragments such as chromatin, which itself can elicit a chronic inflammatory response within the cytoplasm and affect autophagy. The ultimate result of unresolved chronic inflammation is fibrosis, a step before tissue remodeling results in the formation of a precancerous niche (PCN). Various pathogenic stimuli associated with different neoplasms result in persistent inflammation. This ongoing disruption of homeostasis in the micromilieu of cells, tissues, and organs is an essential preamble to carcinogenesis and occurs early in that process.
病原性(生物或化学)刺激是细胞接收到的最早的信息,可以导致体内平衡的破坏,从而导致疾病的发展。慢性炎症涉及多种类型的细胞,具有众多的细胞因子和信号通路,细胞释放不同的成分,这些刺激引起的串扰涉及亚临床慢性炎症,其机制是多方面的。外泌体分泌化学物质,触发上皮产生外泌体样纳米颗粒,促进慢性炎症。小分子与各种细胞因子一起,选择性地靶向诱导串扰的信号通路,从而抑制细胞凋亡。16S rRNA基因测序已成为提供人体组织和水库中发现的细菌组成和丰度信息的常规方法。慢性炎症刺激下自噬的解除是癌变的早期现象。细胞-细胞完整性的破坏使CagA能够跨细胞迁移,并引发自噬的解除,最终结果是慢性炎症。慢性炎症的复杂性和潜伏性可以在细胞内外看到,甚至与细胞内的核片段如染色质一起,它本身可以引起细胞质内的慢性炎症反应并影响自噬。未解决的慢性炎症的最终结果是纤维化,在组织重塑导致癌前生态位(PCN)形成之前的一个步骤。与不同肿瘤相关的各种致病刺激导致持续炎症。这种对细胞、组织和器官微环境内稳态的持续破坏是发生癌变的重要前奏,并发生在癌变过程的早期。
{"title":"Chronic inflammation evoked by pathogenic stimulus during carcinogenesis","authors":"B. Brücher, I. Jamall","doi":"10.1051/FOPEN/2018006","DOIUrl":"https://doi.org/10.1051/FOPEN/2018006","url":null,"abstract":"A pathogenic (biological or chemical) stimulus is the earliest information received by a cell that can result in the disruption of homeostasis with consequent development of disease. Chronic inflammation involves many cell types with numerous cytokines and signaling pathways, the release of different components by the cells, and the crosstalk provoked by such stimuli involving subclinical chronic inflammation and is mechanistically manifold. Exosomes secrete chemicals that trigger the epithelium to produce exosome-like nanoparticles promoting chronic inflammation. Small molecules, together with various cytokines, selectively target signaling pathways inducing crosstalk that suppress apoptosis. 16S rRNA gene sequencing has become routine to provide information on the composition and abundance of bacteria found in human tissues and in reservoirs. The deregulation of autophagy with chronic stimulation of inflammation is an early phenomenon in carcinogenesis. The disruption of cell–cell integrity enables transcellular CagA migration and triggers deregulation of autophagy with the net result being chronic inflammation. The complex and insidious nature of chronic inflammation can be seen both inside and outside the cell and even with intracellular nuclear fragments such as chromatin, which itself can elicit a chronic inflammatory response within the cytoplasm and affect autophagy. The ultimate result of unresolved chronic inflammation is fibrosis, a step before tissue remodeling results in the formation of a precancerous niche (PCN). Various pathogenic stimuli associated with different neoplasms result in persistent inflammation. This ongoing disruption of homeostasis in the micromilieu of cells, tissues, and organs is an essential preamble to carcinogenesis and occurs early in that process.","PeriodicalId":6841,"journal":{"name":"4open","volume":"37 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89963793","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 16
To the theory of discrete boundary value problems 对离散边值问题的理论
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2019009
O. Tarasova, V. Vasilyev
We consider discrete analogues of pseudo-differential operators and related discrete equations and boundary value problems. Existence and uniqueness results for special elliptic discrete boundary value problem and comparison for discrete and continuous solutions are given for certain smooth data in discrete Sobolev–Slobodetskii spaces.
研究伪微分算子的离散类似物及其相关的离散方程和边值问题。给出了离散Sobolev-Slobodetskii空间中某些光滑数据的特殊椭圆型离散边值问题的存在唯一性结果以及离散解与连续解的比较。
{"title":"To the theory of discrete boundary value problems","authors":"O. Tarasova, V. Vasilyev","doi":"10.1051/FOPEN/2019009","DOIUrl":"https://doi.org/10.1051/FOPEN/2019009","url":null,"abstract":"We consider discrete analogues of pseudo-differential operators and related discrete equations and boundary value problems. Existence and uniqueness results for special elliptic discrete boundary value problem and comparison for discrete and continuous solutions are given for certain smooth data in discrete Sobolev–Slobodetskii spaces.","PeriodicalId":6841,"journal":{"name":"4open","volume":"104 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74840411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Cramer’s rules for the system of quaternion matrix equations with η-Hermicity 具有η-Hermicity的四元数矩阵方程组的Cramer规则
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2019021
Ivan Kyrchei
The system of two-sided quaternion matrix equations with η-Hermicity, A1XA1η* = C1, A2XA2η* = C2 is considered in the paper. Using noncommutative row-column determinants previously introduced by the author, determinantal representations (analogs of Cramer’s rule) of a general solution to the system are obtained. As special cases, Cramer’s rules for an η-Hermitian solution when C1 = Cη*1 and C2 = Cη*2 and for an η-skew-Hermitian solution when C1 = −Cη*1 and C2 = −Cη*2 are also explored.
本文研究了具有η-Hermicity, A1XA1η* = C1, A2XA2η* = C2的双边四元数矩阵方程组。利用作者先前介绍的非交换行列行列式,得到了系统通解的行列式表示(类似于Cramer规则)。作为特殊情况,我们还探讨了当C1 = Cη*1和C2 = Cη*2时的η-厄米解和当C1 = - Cη*1和C2 = - Cη*2时的η-斜厄米解的Cramer规则。
{"title":"Cramer’s rules for the system of quaternion matrix equations with η-Hermicity","authors":"Ivan Kyrchei","doi":"10.1051/FOPEN/2019021","DOIUrl":"https://doi.org/10.1051/FOPEN/2019021","url":null,"abstract":"The system of two-sided quaternion matrix equations with η-Hermicity, A1XA1η* = C1, A2XA2η* = C2 is considered in the paper. Using noncommutative row-column determinants previously introduced by the author, determinantal representations (analogs of Cramer’s rule) of a general solution to the system are obtained. As special cases, Cramer’s rules for an η-Hermitian solution when C1 = Cη*1 and C2 = Cη*2 and for an η-skew-Hermitian solution when C1 = −Cη*1 and C2 = −Cη*2 are also explored.","PeriodicalId":6841,"journal":{"name":"4open","volume":"16 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77110644","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Transition from normal to cancerous cell by precancerous niche (PCN) induced chronic cell-matrix stress 由癌前生态位(PCN)诱导的慢性细胞基质应激从正常细胞转变为癌细胞
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2018996
B. Brücher, I. Jamall
The attempt to restore homeostasis, once disrupted, such that complex signaling, crosstalk between ubiquitous proteins, and a diverse range of pathways gone awry is near impossible, especially in the presence of an ongoing pathogenic stimuli with incessant inflammation. This persistent inflammation, when unresolved, induces fibrosis with consequent remodeling of the extracellular matrix (ECM) which leads to the formation of the precancerous niche (PCN), the tipping point in the transition of normal to cancerous cells. Thus, the sustained disruption of homeostasis when confronted with limited adaptation capabilities either of cells or of the surrounding matrix and faced with chronic stress in the tissue microenvironment results in an escape strategy which, if unsuccessful, causes cells, tissue, or the organism to become unable to recover over the long term. All conditions necessary for cell–cell transition such as deregulation of cell–cell complexes, decrease in the stability of adherens junctions, together with the apical-basal polarity, and the loss of the cytoskeletal architecture occurs as a cascade of events inducing inappropriate and diverse signaling pathways and crosstalk. In biology, the transition of one cell type to another and the transition from one cell function to another is incompletely understood mechanistically, but within the context of embryogenesis and morphogenesis is acknowledged as a physiologically routine event. The constant stress that can result in the development of the PCN leads to a chronic stress escape strategy (CSES) which, if unsuccessful, eventually triggers a normal cell- to-cancer cell- transition (NCCCT).
恢复体内平衡的尝试,一旦被破坏,如复杂的信号,无所不在的蛋白质之间的串扰,以及各种各样的途径出错,几乎是不可能的,特别是在持续的病原刺激和持续的炎症存在的情况下。这种持续的炎症,如果不解决,诱发纤维化,随后细胞外基质(ECM)重塑,导致癌前生态位(PCN)的形成,这是正常细胞向癌细胞转变的临界点。因此,当面临细胞或周围基质的有限适应能力和组织微环境中的慢性应激时,持续的稳态破坏会导致逃逸策略,如果不成功,则会导致细胞,组织或生物体无法长期恢复。细胞-细胞转变的所有必要条件,如细胞-细胞复合物的解除管制,粘附连接稳定性的降低,以及顶基极性,以及细胞骨架结构的丧失,都是一系列事件引起的,这些事件会诱导不适当和不同的信号通路和串扰。在生物学中,从一种细胞类型到另一种细胞类型以及从一种细胞功能到另一种细胞功能的转变尚未完全从机制上理解,但在胚胎发生和形态发生的背景下,这被认为是一种生理常规事件。持续的应激可导致PCN的发展,导致慢性应激逃逸策略(CSES),如果不成功,最终触发正常细胞向癌细胞的转化(NCCCT)。
{"title":"Transition from normal to cancerous cell by precancerous niche (PCN) induced chronic cell-matrix stress","authors":"B. Brücher, I. Jamall","doi":"10.1051/FOPEN/2018996","DOIUrl":"https://doi.org/10.1051/FOPEN/2018996","url":null,"abstract":"The attempt to restore homeostasis, once disrupted, such that complex signaling, crosstalk between ubiquitous proteins, and a diverse range of pathways gone awry is near impossible, especially in the presence of an ongoing pathogenic stimuli with incessant inflammation. This persistent inflammation, when unresolved, induces fibrosis with consequent remodeling of the extracellular matrix (ECM) which leads to the formation of the precancerous niche (PCN), the tipping point in the transition of normal to cancerous cells. Thus, the sustained disruption of homeostasis when confronted with limited adaptation capabilities either of cells or of the surrounding matrix and faced with chronic stress in the tissue microenvironment results in an escape strategy which, if unsuccessful, causes cells, tissue, or the organism to become unable to recover over the long term. All conditions necessary for cell–cell transition such as deregulation of cell–cell complexes, decrease in the stability of adherens junctions, together with the apical-basal polarity, and the loss of the cytoskeletal architecture occurs as a cascade of events inducing inappropriate and diverse signaling pathways and crosstalk. In biology, the transition of one cell type to another and the transition from one cell function to another is incompletely understood mechanistically, but within the context of embryogenesis and morphogenesis is acknowledged as a physiologically routine event. The constant stress that can result in the development of the PCN leads to a chronic stress escape strategy (CSES) which, if unsuccessful, eventually triggers a normal cell- to-cancer cell- transition (NCCCT).","PeriodicalId":6841,"journal":{"name":"4open","volume":"9 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"90849811","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Tail conditional probabilities to predict academic performance 尾部条件概率预测学习成绩
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2019012
V. González-López, Marina Capelari Piovesana, N. Romano
In this paper, we estimate tail conditional probabilities by incorporating copula models and adopting a Bayesian estimation process for the copula’s parameter. Based on the records of student’s classifications in (a) Mathematics and (b) Natural Sciences/Physics (of the entrance exam to the University of Campinas, from 2013 to 2015), by means of tail conditional probabilities we predict the performance, of the same students, in Calculus I which is a mandatory subject of the undergraduate course of Statistics, and we compare the conditional probabilities year after year. We see that (a), (b) and Calculus I show maximal trivariate correlations in tail events given by classifications which are jointly high/low in the three subjects. We compare the evolution of the tail conditional probabilities from 2013 to 2015 and, according to our results there has been an improvement (from 2013 to 2015) of at most 12%. This improvement being more incisive in the settings with conditional events given by jointly high classifications in comparison with settings with conditional events given by jointly lower classifications.
本文通过引入copula模型并对copula参数采用贝叶斯估计过程来估计尾部条件概率。根据学生在(a)数学和(b)自然科学/物理(2013年至2015年坎皮纳斯大学入学考试)中的分类记录,通过尾部条件概率,我们预测了相同学生在微积分I(统计学本科必修科目)中的表现,我们年复一年地比较条件概率。我们看到(a)、(b)和微积分I在尾部事件中显示出最大的三元相关性,这些尾部事件是由三个科目中联合高/低的分类给出的。我们比较了从2013年到2015年尾部条件概率的演变,根据我们的结果,从2013年到2015年,有最多12%的改进。与联合高分类给出条件事件的设置相比,这种改进在联合低分类给出条件事件的设置中更为明显。
{"title":"Tail conditional probabilities to predict academic performance","authors":"V. González-López, Marina Capelari Piovesana, N. Romano","doi":"10.1051/FOPEN/2019012","DOIUrl":"https://doi.org/10.1051/FOPEN/2019012","url":null,"abstract":"In this paper, we estimate tail conditional probabilities by incorporating copula models and adopting a Bayesian estimation process for the copula’s parameter. Based on the records of student’s classifications in (a) Mathematics and (b) Natural Sciences/Physics (of the entrance exam to the University of Campinas, from 2013 to 2015), by means of tail conditional probabilities we predict the performance, of the same students, in Calculus I which is a mandatory subject of the undergraduate course of Statistics, and we compare the conditional probabilities year after year. We see that (a), (b) and Calculus I show maximal trivariate correlations in tail events given by classifications which are jointly high/low in the three subjects. We compare the evolution of the tail conditional probabilities from 2013 to 2015 and, according to our results there has been an improvement (from 2013 to 2015) of at most 12%. This improvement being more incisive in the settings with conditional events given by jointly high classifications in comparison with settings with conditional events given by jointly lower classifications.","PeriodicalId":6841,"journal":{"name":"4open","volume":"12 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"90235633","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Solar air drying for innovative Opuntia ficus-indica cladode dehydration 太阳能空气干燥创新的无花果树脱水
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2019001
R. Ciriminna, Vin Morreale, Mario Pecoraino, M. Pagliaro
Providing a case study of general applicability in all world's semi-arid regions where the plant is increasingly harvested, we describe the use and outcomes of solar air heating and ventilation coupled to a conventional kiln to dehydrate Opuntia ficus-indica cladodes. For the first time, the dried cladodes and the ground dehydrated ‘Nopal’ cladodes retain their natural green-yellow color. New applications to functionalize foodstuff and to formulate nutraceutical, personal care and cosmetic products of even higher efficacy and broader scope are anticipated.
提供了一个在世界上所有半干旱地区普遍适用性的案例研究,在这些地区,植物的收获越来越多,我们描述了太阳能空气加热和通风与传统窑相结合来脱水无花果树枝的使用和结果。第一次,干燥的枝枝和地面脱水的“Nopal”枝枝保留了其自然的黄绿色。新的应用,以功能化食品和配制营养保健品,个人护理和化妆品,甚至更高的功效和更广泛的范围预计。
{"title":"Solar air drying for innovative Opuntia ficus-indica cladode dehydration","authors":"R. Ciriminna, Vin Morreale, Mario Pecoraino, M. Pagliaro","doi":"10.1051/FOPEN/2019001","DOIUrl":"https://doi.org/10.1051/FOPEN/2019001","url":null,"abstract":"Providing a case study of general applicability in all world's semi-arid regions where the plant is increasingly harvested, we describe the use and outcomes of solar air heating and ventilation coupled to a conventional kiln to dehydrate Opuntia ficus-indica cladodes. For the first time, the dried cladodes and the ground dehydrated ‘Nopal’ cladodes retain their natural green-yellow color. New applications to functionalize foodstuff and to formulate nutraceutical, personal care and cosmetic products of even higher efficacy and broader scope are anticipated.","PeriodicalId":6841,"journal":{"name":"4open","volume":"61 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78543244","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Undervalued ubiquitous proteins 被低估的普遍存在的蛋白质
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2019002
B. Brücher, I. Jamall
The role of ubiquitous proteins (UPs) and their corresponding enzymes have been underestimated in carcinogenesis as the focus of much research revolved around measuring mutations and/or other genetic epiphenomena as surrogate markers of cancer and cancer progression. Over the past three decades, the scientific community has come to realize that the concentration on microdissection of cancer cells without accounting for the neighborhood in which these cells reside, i.e., the stroma, fails to reflect the true nature of cancer biology. UPs are fundamental for cellular homeostasis and phylogenetic development as well as for the integrity of the cytoskeleton and for the stability of cells and tissues in regards to intercellular signaling, cell shape and mobility, apoptosis, wound healing, and cell polarity. Corresponding enzymes are used by microorganisms to gain entry into the host by degradation of UPs and play a role to cleave peptide bonds for killing disease-causing life forms along for the creation of the precancerous niche (PCN) during carcinogenesis, cancer invasion, and in metastasis. The language used by such proteins as well as their complementary enzymes with its influence on multiple pathways and the cross-linked extracellular matrix is incompletely understood. The role of UPs in the disruption of signaling homeostasis and resulting interference with crosstalk in carcinogenesis appears sufficiently delineated to warrant a much more refined examination of their qualitative and quantitative contribution to the development of cancer and cancer therapy.
无处不在的蛋白质(UPs)及其相应的酶在癌变过程中的作用被低估了,因为许多研究的重点是测量突变和/或其他遗传现象,作为癌症和癌症进展的替代标志物。在过去的三十年里,科学界已经意识到,只专注于癌细胞的微观解剖,而不考虑这些细胞所在的邻区,即基质,不能反映癌症生物学的真实本质。UPs是细胞稳态和系统发育的基础,也是细胞骨架的完整性和细胞和组织在细胞间信号传导、细胞形状和移动、细胞凋亡、伤口愈合和细胞极性方面的稳定性的基础。微生物利用相应的酶通过降解UPs进入宿主,并在致癌、癌症侵袭和转移过程中切割肽键,杀死致病性生命形式,并创造癌前生态位(PCN)。这些蛋白质以及它们的互补酶所使用的语言及其对多种途径和交联细胞外基质的影响尚不完全清楚。在癌变过程中,UPs在信号稳态的破坏和由此产生的串扰干扰中的作用似乎得到了充分的描述,以保证对其对癌症和癌症治疗发展的定性和定量贡献进行更精细的检查。
{"title":"Undervalued ubiquitous proteins","authors":"B. Brücher, I. Jamall","doi":"10.1051/FOPEN/2019002","DOIUrl":"https://doi.org/10.1051/FOPEN/2019002","url":null,"abstract":"The role of ubiquitous proteins (UPs) and their corresponding enzymes have been underestimated in carcinogenesis as the focus of much research revolved around measuring mutations and/or other genetic epiphenomena as surrogate markers of cancer and cancer progression. Over the past three decades, the scientific community has come to realize that the concentration on microdissection of cancer cells without accounting for the neighborhood in which these cells reside, i.e., the stroma, fails to reflect the true nature of cancer biology. UPs are fundamental for cellular homeostasis and phylogenetic development as well as for the integrity of the cytoskeleton and for the stability of cells and tissues in regards to intercellular signaling, cell shape and mobility, apoptosis, wound healing, and cell polarity. Corresponding enzymes are used by microorganisms to gain entry into the host by degradation of UPs and play a role to cleave peptide bonds for killing disease-causing life forms along for the creation of the precancerous niche (PCN) during carcinogenesis, cancer invasion, and in metastasis. The language used by such proteins as well as their complementary enzymes with its influence on multiple pathways and the cross-linked extracellular matrix is incompletely understood. The role of UPs in the disruption of signaling homeostasis and resulting interference with crosstalk in carcinogenesis appears sufficiently delineated to warrant a much more refined examination of their qualitative and quantitative contribution to the development of cancer and cancer therapy.","PeriodicalId":6841,"journal":{"name":"4open","volume":"7 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74626981","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
Precancerous niche (PCN), a product of fibrosis with remodeling by incessant chronic inflammation 癌前生态位(PCN),由持续慢性炎症引起的纤维化和重塑的产物
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2018009
B. Brücher, I. Jamall
Fibroblasts are actively involved in the creation of the stroma and the extracellular matrix which are important for cell adhesion, cell–cell communication, and tissue metabolism. The role of fibrosis in carcinogenesis can be examined by analogy to tissues of various cancers. The orchestration of letters in the interplay of manifold components with signaling and crosstalk is incompletely understood but available evidence suggests a hitherto underappreciated role for fibrosis in carcinogenesis. Complex signaling and crosstalk by pathogenic stimuli evoke persistent subclinical inflammation, which in turn, results in a cascade of different cell types, ubiquitous proteins and their corresponding enzymes, cytokine releases, and multiple signaling pathways promoting the onset of fibrosis. There is considerable evidence that the body's attempt to resolve such a modified extracellular environment leads to further disruption of homeostasis and the genesis of the precancerous niche as part of the six-step process that describes carcinogenesis. The precancerous niche is formed and can be understood to develop as a result of (1) pathogenic stimulus, (2) chronic inflammation, and (3) fibrosis with alterations of the extracellular matrix, stromal rigidity, and mechano-transduction. This is why carcinogenesis is not just a process of aberrant cell growth with damaged genetic material but the role of the PCN in its entirety reveals how carcinogenesis can occur without invoking the need for somatic mutations.
成纤维细胞积极参与基质和细胞外基质的形成,这对细胞粘附、细胞间通讯和组织代谢至关重要。纤维化在癌变中的作用可以通过类比各种癌症的组织来检验。多种成分与信号和串扰相互作用中的字母编排尚不完全清楚,但现有证据表明迄今为止未被充分认识的纤维化在癌变中的作用。致病刺激引起的复杂信号和串扰引起持续的亚临床炎症,这反过来又导致不同细胞类型的级联,无处不在的蛋白质及其相应的酶,细胞因子的释放和多种信号通路促进纤维化的发生。有相当多的证据表明,人体试图解决这种改变的细胞外环境,导致体内平衡进一步破坏,癌前生态位的形成,这是描述癌变的六步过程的一部分。癌前生态位的形成和发展可以理解为:(1)致病性刺激,(2)慢性炎症,(3)细胞外基质、基质硬度和机械转导改变的纤维化。这就是为什么癌变不仅仅是一个遗传物质受损的异常细胞生长过程,而且PCN在整个过程中的作用揭示了癌变是如何在不需要体细胞突变的情况下发生的。
{"title":"Precancerous niche (PCN), a product of fibrosis with remodeling by incessant chronic inflammation","authors":"B. Brücher, I. Jamall","doi":"10.1051/FOPEN/2018009","DOIUrl":"https://doi.org/10.1051/FOPEN/2018009","url":null,"abstract":"Fibroblasts are actively involved in the creation of the stroma and the extracellular matrix which are important for cell adhesion, cell–cell communication, and tissue metabolism. The role of fibrosis in carcinogenesis can be examined by analogy to tissues of various cancers. The orchestration of letters in the interplay of manifold components with signaling and crosstalk is incompletely understood but available evidence suggests a hitherto underappreciated role for fibrosis in carcinogenesis. Complex signaling and crosstalk by pathogenic stimuli evoke persistent subclinical inflammation, which in turn, results in a cascade of different cell types, ubiquitous proteins and their corresponding enzymes, cytokine releases, and multiple signaling pathways promoting the onset of fibrosis. There is considerable evidence that the body's attempt to resolve such a modified extracellular environment leads to further disruption of homeostasis and the genesis of the precancerous niche as part of the six-step process that describes carcinogenesis. The precancerous niche is formed and can be understood to develop as a result of (1) pathogenic stimulus, (2) chronic inflammation, and (3) fibrosis with alterations of the extracellular matrix, stromal rigidity, and mechano-transduction. This is why carcinogenesis is not just a process of aberrant cell growth with damaged genetic material but the role of the PCN in its entirety reveals how carcinogenesis can occur without invoking the need for somatic mutations.","PeriodicalId":6841,"journal":{"name":"4open","volume":"34 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79550663","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 10
Microbiome and morbid obesity increase pathogenic stimulus diversity 微生物组和病态肥胖增加了致病刺激的多样性
Pub Date : 2019-01-01 DOI: 10.1051/FOPEN/2018007
B. Brücher, I. Jamall
The microbiome, the relationship between environmental factors, a high-fat diet, morbid obesity, and host response have been associated with cancer, only a small fraction of which (<10%) are genetically triggered. This nongenetic association is underpinned by a worldwide increase in morbid obesity, which is associated with both insulin resistance and chronic inflammation. The connection of the microbiome and morbid obesity is reinforced by an approximate shift of about 47% in the estimated total number of bacteria and an increase from 38,000,000,000,000 in a reference man to 56,000,000,000,000 in morbid obesity leading to a disruption of the microbial ecology within the gut. Humans contain 6,000,000,000 microbes and more than 90% of the cells of the human body are microorganisms. Changes in the microflora of the gut are associated with the polarization of ion channels by butyrate, thereby influencing cell growth. The decrease in the relative proportion ofBacteroidetestogether with a change in the fermentation of carbohydrates by bacteria is observed in morbid obesity. The disruption of homeostasis of the microflora in the obese changes signaling and crosstalk of several pathways, resulting in inflammation while suppressing apoptosis. The interactions between the microbiome and morbid obesity are important to understand signaling and crosstalk in the context of the progression of the six-step sequence of carcinogenesis. This disruption of homeostasis increases remodeling of the extracellular matrix and fibrosis followed by the none-resolvable precancerous niche as the internal pathogenic stimuli continue. The chronic stress explains why under such circumstances there is a greater proclivity for normal cells to undergo the transition to cancer cells.
微生物组、环境因素、高脂肪饮食、病态肥胖和宿主反应之间的关系与癌症有关,其中只有一小部分(<10%)是由基因触发的。这种非遗传关联得到了世界范围内病态肥胖增加的支持,病态肥胖与胰岛素抵抗和慢性炎症有关。微生物群和病态肥胖之间的联系得到了加强,估计细菌总数大约发生了47%的变化,病态肥胖的细菌数量从参考人的38,000,000,000,000增加到56,000,000,000,000,导致肠道内微生物生态的破坏。人体含有60亿微生物,人体90%以上的细胞是微生物。肠道菌群的变化与丁酸盐离子通道的极化有关,从而影响细胞生长。在病态肥胖中观察到拟杆菌睾酮的相对比例下降以及细菌对碳水化合物发酵的变化。在肥胖中,微生物群的内稳态的破坏改变了几种途径的信号和串扰,在抑制细胞凋亡的同时导致炎症。微生物组与病态肥胖之间的相互作用对于理解致癌六步序列进展中的信号传导和串扰非常重要。随着内部致病刺激的继续,这种对内稳态的破坏增加了细胞外基质的重塑和纤维化,随后是不可解决的癌前生态位。这种慢性压力解释了为什么在这种情况下,正常细胞更倾向于转变为癌细胞。
{"title":"Microbiome and morbid obesity increase pathogenic stimulus diversity","authors":"B. Brücher, I. Jamall","doi":"10.1051/FOPEN/2018007","DOIUrl":"https://doi.org/10.1051/FOPEN/2018007","url":null,"abstract":"The microbiome, the relationship between environmental factors, a high-fat diet, morbid obesity, and host response have been associated with cancer, only a small fraction of which (<10%) are genetically triggered. This nongenetic association is underpinned by a worldwide increase in morbid obesity, which is associated with both insulin resistance and chronic inflammation. The connection of the microbiome and morbid obesity is reinforced by an approximate shift of about 47% in the estimated total number of bacteria and an increase from 38,000,000,000,000 in a reference man to 56,000,000,000,000 in morbid obesity leading to a disruption of the microbial ecology within the gut. Humans contain 6,000,000,000 microbes and more than 90% of the cells of the human body are microorganisms. Changes in the microflora of the gut are associated with the polarization of ion channels by butyrate, thereby influencing cell growth. The decrease in the relative proportion ofBacteroidetestogether with a change in the fermentation of carbohydrates by bacteria is observed in morbid obesity. The disruption of homeostasis of the microflora in the obese changes signaling and crosstalk of several pathways, resulting in inflammation while suppressing apoptosis. The interactions between the microbiome and morbid obesity are important to understand signaling and crosstalk in the context of the progression of the six-step sequence of carcinogenesis. This disruption of homeostasis increases remodeling of the extracellular matrix and fibrosis followed by the none-resolvable precancerous niche as the internal pathogenic stimuli continue. The chronic stress explains why under such circumstances there is a greater proclivity for normal cells to undergo the transition to cancer cells.","PeriodicalId":6841,"journal":{"name":"4open","volume":"18 8 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79608133","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
期刊
4open
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1