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A recombinant fragment antigen-binding (Fab) of trastuzumab displays low cytotoxic profile in adult human cardiomyocytes: first evidence and the key implication of FcγRIIA receptor. 曲妥珠单抗的重组抗原结合片段(Fab)在成人心肌细胞中显示出低细胞毒性特征:首个证据和 FcγRIIA 受体的关键作用。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-16 DOI: 10.1038/s41401-024-01397-3
Anna De Bartolo, Naomi Romeo, Alessandro Marrone, Vittoria Rago, Maria Concetta Granieri, Maria Luigia Vommaro, Arianna Cupelli, Maria Carmela Cerra, Cesare Indiveri, Raffaele Ronca, Maria Cantile, Riccardo Sanna, Carmine Rocca, Tommaso Angelone

Fragment crystallizable gamma receptors (FcγRs) mediate various cellular responses with significant cardiovascular implications. They contribute to the anticancer activity of trastuzumab (TRZ), a recombinant humanized monoclonal antibody that interferes with human epidermal growth factor receptor 2 (HER2), thereby blocking its physiological function in cardiac cells. This is responsible for cardiac complications that hamper TRZ clinical application. In this study we investigated the involvement of FcγRs in the TRZ cardiotoxicity. We used a recombinant antigen-binding fragment (Fab) of TRZ (rFab-HER2) to examine whether the absence of the Fc region resulted in fewer cardiomyocyte toxicity while preserving TRZ's ability to inhibit HER2. When exposed to rFab-HER2, AC16 human adult ventricular cardiomyocytes were less vulnerable to damage and death, than to TRZ. Specifically, TRZ exhibited cytotoxicity at a lower concentration (150 µg/mL, corresponding to ~1 µM) compared to rFab-HER2 (250 µg/mL, corresponding to ~5 µM). Like TRZ, rFab-HER2 negatively modulated HER2 levels in cardiomyocyte (without inducing cytotoxic activity in BJ human fibroblast cells that either did not express or express very low levels of HER2) and inhibited the downstream ERK/AKT cascades. But rFab-HER2 did not alter cardiomyocyte mitochondrial dynamic balance, and affect apoptosis and inflammation, while it limited cytosolic and mitochondrial ROS indicators. On contrary, the Fc region (50-250 μg/mL) exerted direct cytotoxic action on cardiomyocytes (but not on human fibroblasts that lacked Fc receptors). TRZ (150 μg/mL) markedly upregulated the expression level of FcγRIIA (a FcγRs strongly involved in TRZ-induced antibody-dependent cellular toxicity) in cardiomyocytes, whereas the Fab fragment (150 μg/mL) had no effect. Our results demonstrate that Fc region plays an important pathogenic role in TRZ-induced cardiomyocyte toxicity. In addition, targeting FcγRIIA might contribute to the off-target effects of TRZ therapy.

片段可结晶γ受体(FcγRs)介导各种细胞反应,对心血管具有重要影响。它们有助于发挥曲妥珠单抗(TRZ)的抗癌活性,曲妥珠单抗是一种重组人源化单克隆抗体,可干扰人表皮生长因子受体 2(HER2),从而阻断其在心脏细胞中的生理功能。这就是阻碍 TRZ 临床应用的心脏并发症的原因。在这项研究中,我们调查了FcγRs参与TRZ心脏毒性的情况。我们使用了 TRZ 的重组抗原结合片段(Fab)(rFab-HER2)来研究 Fc 区的缺失是否会在保留 TRZ 抑制 HER2 能力的同时降低心肌细胞毒性。与 TRZ 相比,当暴露于 rFab-HER2 时,AC16 人类成人心室心肌细胞更不易受损和死亡。具体来说,与 rFab-HER2(250 微克/毫升,相当于约 5 微摩尔)相比,TRZ 在较低浓度(150 微克/毫升,相当于约 1 微摩尔)时表现出细胞毒性。与 TRZ 一样,rFab-HER2 也能负向调节心肌细胞中的 HER2 水平(在不表达或表达极低水平 HER2 的 BJ 人成纤维细胞中不会诱导细胞毒性活性),并抑制下游 ERK/AKT 级联。但是,rFab-HER2 并没有改变心肌细胞线粒体的动态平衡,也没有影响细胞凋亡和炎症反应,同时限制了细胞膜和线粒体的 ROS 指标。相反,Fc 区(50-250 μg/mL)对心肌细胞(但不包括缺乏 Fc 受体的人成纤维细胞)产生直接的细胞毒性作用。TRZ(150 μg/mL)显著上调了心肌细胞中FcγRIIA(一种FcγRs,与TRZ诱导的抗体依赖性细胞毒性密切相关)的表达水平,而Fab片段(150 μg/mL)则没有影响。我们的研究结果表明,Fc 区在 TRZ 诱导的心肌细胞毒性中起着重要的致病作用。此外,靶向 FcγRIIA 可能会导致 TRZ 治疗的脱靶效应。
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引用次数: 0
Mettl1 knockdown alleviates cardiac I/R injury in mice by inactivating the Mettl1-CYLD-P53 positive feedback loop. 通过使 Mettl1-CYLD-P53 正反馈回路失活,敲除 Mettl1 可减轻小鼠心脏 I/R 损伤。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-16 DOI: 10.1038/s41401-024-01395-5
Shu-Ting Yu, Zhi-Yong Sun, Na Li, Zhe-Zhe Qu, Chang-Hao Wang, Tian-Tian Ju, Ying-Qi Liu, Zhong-Ting Mei, Kui-Wu Liu, Mei-Xi Lu, Min Huang, Ying Li, Shun-Kang Dou, Jian-Hao Jiang, Yao-Zhi Zhang, Chuan-Hao Huang, Xiao-Chen Pang, Ying-Qiong Jia, Xian-Hui Dong, Fan Wu, Yi Zhang, Wan-Hong Li, Bao-Feng Yang, Wei-Jie Du

The N7-methylguanosine (m7G) methyltransferase Mettl1 has been recently implicated in cardiac repair and fibrosis. In this study we investigated the role of Mettl1 in mouse cardiomyocytes injury and the underlying mechanisms. Cardiac ischemia/reperfusion (I/R) I/R model was established in mice by ligation of the left anterior descending coronary artery (LAD) for 45 min followed by reperfusion for 24 h. We showed the mRNA and protein levels of Mettl1 were significantly upregulated in mouse I/R hearts and H2O2-treated neonatal mouse cardiomyocytes (NMCMs). Mettl1 knockdown markedly ameliorated cardiac I/R injury, evidenced by decreased infarct size, apoptosis, and improved cardiac function. Overexpression of Mettl1 triggered cardiomyocytes apoptosis in vivo and in vitro. By performing RNA sequencing combined with m7G methylated RNA sequencing in Mettl1-overexpressing mouse hearts, we revealed that Mettl1 catalyzed m7G modification of the deubiquitinase cylindromatosis (CYLD) mRNA to increase the expression of CYLD, which enhanced the stability of P53 via abrogating its ubiquitination degradation. Vice versa, P53 served as a transcriptional factor to positively regulate Mettl1 expression during I/R injury. Knockdown of CYLD mitigated cardiomyocytes apoptosis induced by Mettl1 overexpression or oxidative stress. From the available drug-targets databases and literature, we identified 4 small molecule inhibitors of m7G modification. Sinefungin, one of the Mettl1 inhibitors exerted profound protection against cardiac I/R injury in vivo and in vitro. Collectively, this study has identified Mettl1 as a key regulator of cardiomyocyte apoptosis, and targeting the Mettl1-CYLD-P53 positive feedback circuit may represent a novel therapeutic avenue for alleviating cardiac I/R injury.

最近,N7-甲基鸟苷(m7G)甲基转移酶 Mettl1 与心脏修复和纤维化有关。本研究探讨了 Mettl1 在小鼠心肌细胞损伤中的作用及其内在机制。我们发现在小鼠 I/R 心脏和 H2O2 处理的新生小鼠心肌细胞(NMCMs)中,Mettl1 的 mRNA 和蛋白水平显著上调。敲除 Mettl1 能明显改善心脏 I/R 损伤,表现为梗死面积缩小、细胞凋亡减少和心功能改善。过表达 Mettl1 会引发体内和体外心肌细胞凋亡。通过对Mettl1过表达的小鼠心脏进行RNA测序和m7G甲基化RNA测序,我们发现Mettl1催化了去泛素化酶圆柱瘤(CYLD)mRNA的m7G修饰,从而增加了CYLD的表达,CYLD通过抑制P53的泛素化降解增强了P53的稳定性。反之亦然,在I/R损伤过程中,P53作为转录因子正向调节Mettl1的表达。敲除 CYLD 可减轻 Mettl1 过表达或氧化应激诱导的心肌细胞凋亡。从现有的药物靶点数据库和文献中,我们发现了 4 种 m7G 修饰的小分子抑制剂。其中一种 Mettl1 抑制剂 Sinefungin 能在体内和体外对心脏 I/R 损伤起到很好的保护作用。总之,本研究发现 Mettl1 是心肌细胞凋亡的关键调节因子,针对 Mettl1-CYLD-P53 的正反馈回路可能是减轻心脏 I/R 损伤的一种新的治疗途径。
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引用次数: 0
A structure-based virtual screening identifies a novel MDM2 antagonist in the activation of the p53 signaling and inhibition of tumor growth. 基于结构的虚拟筛选发现了一种新型 MDM2 拮抗剂,可激活 p53 信号传导并抑制肿瘤生长。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-09 DOI: 10.1038/s41401-024-01394-6
Qing-Yong Hu, Lei Li, Yu-Huang Li, Hai-Bo Zhang, Tao Deng, Yang Liu, Feng-Tian Li, Zhi-Xiong Xiao, Yang Cao

p53, a tumor suppressor protein, has a vital role in the regulation of the cell cycle, apoptosis, and DNA damage repair. The degradation of p53 is predominantly controlled by the murine double minute 2 (MDM2) protein, a ubiquitin E3 ligase. The overexpression or amplification of MDM2 is commonly observed in various human cancers bearing wild-type p53 alleles, leading to the rapid degradation of the p53 protein and the attenuation of p53 tumor suppression functions. Thus, a major effort in p53-based cancer therapy has been to research MDM2 antagonists that specifically stabilize and activate p53, leading to the suppression of tumor growth. However, despite numerous efforts to develop MDM2 antagonists, to date they have failed to reach clinical use, largely because of the cytotoxicity associated with these small molecules. This study used our newly designed structure-based virtual screening approach on a commercial compound library to identify a novel compound, CGMA-Q18, which directly binds to MDM2, leading to the activation of p53, the induction of apoptosis, and cell cycle arrest in cancer cells. Notably, CGMA-Q18 significantly inhibited tumor xenograft growth in nude mice without observable toxicity. These findings highlight our useful virtual screening protocol and CGMA-Q18 as a putative MDM2 antagonist.

p53 是一种肿瘤抑制蛋白,在调节细胞周期、细胞凋亡和 DNA 损伤修复方面发挥着重要作用。p53 的降解主要由鼠双分 2(MDM2)蛋白(一种泛素 E3 连接酶)控制。在带有野生型 p53 等位基因的各种人类癌症中,通常会观察到 MDM2 的过表达或扩增,从而导致 p53 蛋白的快速降解和 p53 抑瘤功能的减弱。因此,基于 p53 的癌症疗法的一项主要工作就是研究 MDM2 拮抗剂,以特异性地稳定和激活 p53,从而抑制肿瘤生长。然而,尽管人们在开发 MDM2 拮抗剂方面做出了许多努力,但迄今为止它们仍未能应用于临床,主要原因是这些小分子具有细胞毒性。本研究利用我们新设计的基于结构的虚拟筛选方法,在商业化合物库中发现了一种新型化合物 CGMA-Q18,它能直接与 MDM2 结合,从而激活 p53,诱导细胞凋亡,并抑制癌细胞的细胞周期。值得注意的是,CGMA-Q18 能显著抑制肿瘤在裸鼠体内的异种移植生长,且无明显毒性。这些发现突显了我们有用的虚拟筛选方案以及 CGMA-Q18 作为一种推定的 MDM2 拮抗剂的作用。
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引用次数: 0
LN-439A, a novel BAP1 inhibitor, suppresses the growth of basal-like breast cancer by degrading KLF5. 新型 BAP1 抑制剂 LN-439A 可通过降解 KLF5 抑制基底样乳腺癌的生长。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-08 DOI: 10.1038/s41401-024-01361-1
Tian-Tian Wang, Long-Long Zhang, Fu-Bing Li, Jie Zhang, Zhi-Bi Zhang, Da-Zhao Mi, Jian Sun, Hong-Yan Zhang, Chun-Yan Wang, Yi-Hua Chen, Ce-Shi Chen

Basal-like breast cancer (BLBC) is the most malignant subtype of breast cancer because of its aggressive clinical behaviour and lack of effective targeted agents. Krüppel-like factor 5 (KLF5) is an oncogenic transcription factor that is highly expressed in BLBC. The deubiquitinase (DUB) BRCA1-associated protein 1 (BAP1) stabilizes KLF5 and promotes BLBC growth and metastasis. Therefore, pharmacological inhibition of the BAP1‒KLF5 axis is an effective therapeutic strategy for BLBC. Here, through screening, we identified a series of tetrahydro-β-carboline derivatives that effectively reduced the protein expression of KLF5 and exhibited strong antitumour activity. Among the investigated compounds, the lead compound LN-439A presented the strongest antitumour activity and inhibitory effect on KLF5 expression. LN-439A suppressed the proliferation and migration of BLBC cells, induced G2/M arrest, and induced apoptosis. Mechanistically, LN-439A functions as a small molecule catalytic inhibitor of BAP1 by binding to the catalytic pocket of BAP1, leading to the ubiquitination and degradation of KLF5. Consistent with this finding, the overexpression of KLF5 suppressed the antitumour effects of LN-439A. In summary, LN-439A is a promising therapeutic agent for BLBC that functions by targeting the BAP1‒KLF5 axis.

基底样乳腺癌(BLBC)是乳腺癌中恶性程度最高的亚型,因为其临床表现具有侵袭性,而且缺乏有效的靶向药物。Krüppel 样因子 5(KLF5)是一种致癌转录因子,在基底样乳腺癌中高度表达。去泛素化酶(DUB)BRCA1 相关蛋白 1(BAP1)能稳定 KLF5 并促进 BLBC 的生长和转移。因此,药物抑制 BAP1-KLF5 轴是治疗 BLBC 的有效策略。在此,我们通过筛选发现了一系列四氢-β-咔啉衍生物,它们能有效降低 KLF5 的蛋白表达,并表现出很强的抗肿瘤活性。在所研究的化合物中,先导化合物 LN-439A 的抗肿瘤活性和对 KLF5 表达的抑制作用最强。LN-439A 可抑制 BLBC 细胞的增殖和迁移,诱导 G2/M 停滞,并诱导细胞凋亡。从机理上讲,LN-439A通过与BAP1的催化口袋结合,作为BAP1的小分子催化抑制剂发挥作用,导致KLF5泛素化和降解。与这一发现相一致的是,KLF5 的过表达抑制了 LN-439A 的抗肿瘤作用。总之,LN-439A是一种通过靶向BAP1-KLF5轴发挥作用的治疗BLBC的有前途的药物。
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引用次数: 0
ABBV-744 alleviates LPS-induced neuroinflammation via regulation of BATF2-IRF4-STAT1/3/5 axis. ABBV-744通过调节BATF2-IRF4-STAT1/3/5轴减轻LPS诱导的神经炎症。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-01 Epub Date: 2024-06-11 DOI: 10.1038/s41401-024-01318-4
Le-le Wang, Huan Wang, Si-Jin Lin, Xing-Yu Xu, Wen-Juan Hu, Jia Liu, Hai-Yan Zhang

Suppression of neuroinflammation using small molecule compounds targeting the key pathways in microglial inflammation has attracted great interest. Recently, increasing attention has been gained to the role of the second bromodomain (BD2) of the bromodomain and extra-terminal (BET) proteins, while its effect and molecular mechanism on microglial inflammation has not yet been explored. In this study, we evaluated the therapeutic effects of ABBV-744, a BD2 high selective BET inhibitor, on lipopolysaccharide (LPS)-induced microglial inflammation in vitro and in vivo, and explored the key pathways by which ABBV-744 regulated microglia-mediated neuroinflammation. We found that pretreatment of ABBV-744 concentration-dependently inhibited the expression of LPS-induced inflammatory mediators/enzymes including NO, TNF-α, IL-1β, IL-6, iNOS, and COX-2 in BV-2 microglial cells. These effects were validated in LPS-treated primary microglial cells. Furthermore, we observed that administration of ABBV-744 significantly alleviated LPS-induced activation of microglia and transcriptional levels of pro-inflammatory factors TNF-α and IL-1β in mouse hippocampus and cortex. RNA-Sequencing (RNA-seq) analysis revealed that ABBV-744 induced 508 differentially expressed genes (DEGs) in LPS-stimulated BV-2 cells, and gene enrichment and gene expression network analysis verified its regulation on activated microglial genes and inflammatory pathways. We demonstrated that pretreatment of ABBV-744 significantly reduced the expression levels of basic leucine zipper ATF-like transcription factor 2 (BATF2) and interferon regulatory factor 4 (IRF4), and suppressed JAK-STAT signaling pathway in LPS-stimulated BV-2 cells and mice, suggesting that the anti-neuroinflammatory effect of ABBV-744 might be associated with regulation of BATF2-IRF4-STAT1/3/5 pathway, which was confirmed by gene knockdown experiments. This study demonstrates the effect of a BD2 high selective BET inhibitor, ABBV-744, against microglial inflammation, and reveals a BATF2-IRF4-STAT1/3/5 pathway in regulation of microglial inflammation, which might provide new clues for discovery of effective therapeutic strategy against neuroinflammation.

利用靶向小胶质细胞炎症关键通路的小分子化合物抑制神经炎症已引起人们的极大兴趣。最近,人们越来越关注溴域和末端外(BET)蛋白中的第二个溴域(BD2)的作用,但其对小胶质细胞炎症的影响和分子机制尚未得到探讨。在这项研究中,我们评估了 BD2 高选择性 BET 抑制剂 ABBV-744 对脂多糖(LPS)诱导的体外和体内小胶质细胞炎症的治疗效果,并探讨了 ABBV-744 调节小胶质细胞介导的神经炎症的关键途径。我们发现,ABBV-744浓度依赖性地抑制了LPS诱导的炎症介质/酶的表达,包括BV-2小胶质细胞中的NO、TNF-α、IL-1β、IL-6、iNOS和COX-2。这些效应在经 LPS 处理的原代小胶质细胞中得到了验证。此外,我们还观察到 ABBV-744 能显著缓解 LPS 诱导的小胶质细胞活化以及小鼠海马和皮层中促炎因子 TNF-α 和 IL-1β 的转录水平。RNA-测序(RNA-seq)分析表明,ABBV-744在LPS刺激的BV-2细胞中诱导了508个差异表达基因(DEGs),基因富集和基因表达网络分析验证了其对活化的小胶质细胞基因和炎症通路的调控作用。我们证实,ABBV-744预处理可显著降低碱性亮氨酸拉链ATF样转录因子2(BATF2)和干扰素调节因子4(IRF4)的表达水平,并抑制LPS刺激的BV-2细胞和小鼠的JAK-STAT信号通路,这表明ABBV-744的抗神经炎作用可能与调节BATF2-IRF4-STAT1/3/5通路有关,基因敲除实验也证实了这一点。本研究证明了BD2高选择性BET抑制剂ABBV-744对小胶质细胞炎症的作用,并揭示了BATF2-IRF4-STAT1/3/5通路在小胶质细胞炎症调控中的作用,这可能为发现有效的神经炎症治疗策略提供了新的线索。
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引用次数: 0
Author Correction: Apolipoprotein C1 promotes glioblastoma tumorigenesis by reducing KEAP1/NRF2 and CBS-regulated ferroptosis. 作者更正:载脂蛋白C1通过减少KEAP1/NRF2和CBS调控的铁凋亡促进胶质母细胞瘤肿瘤发生
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-01 DOI: 10.1038/s41401-024-01271-2
Xiang-Jin Zheng, Wen-Lin Chen, Jie Yi, Wan Li, Jin-Yi Liu, Wei-Qi Fu, Li-Wen Ren, Sha Li, Bin-Bin Ge, Yi-Hui Yang, Yi-Zhi Zhang, Hong Yang, Guan-Hua Du, Yu Wang, Jin-Hua Wang
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引用次数: 0
Endothelial dysfunction: mechanisms and contribution to diseases. 内皮功能障碍:机制和对疾病的影响。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-01 Epub Date: 2024-05-21 DOI: 10.1038/s41401-024-01295-8
Amir Ajoolabady, Domenico Pratico, Jun Ren

The endothelium, lining the inner surface of blood vessels and spanning approximately 3 m2, serves as the largest organ in the body. Comprised of endothelial cells, the endothelium interacts with other bodily components including the bloodstream, circulating cells, and the lymphatic system. Functionally, the endothelium primarily synchronizes vascular tone (by balancing vasodilation and vasoconstriction) and prevents vascular inflammation and pathologies. Consequently, endothelial dysfunction disrupts vascular homeostasis, leading to vascular injuries and diseases such as cardiovascular, cerebral, and metabolic diseases. In this opinion/perspective piece, we explore the recently identified mechanisms of endothelial dysfunction across various disease subsets and critically evaluate the strengths and limitations of current therapeutic interventions at the pre-clinical level.

内皮细胞位于血管内表面,面积约为 3 平方米,是人体最大的器官。由内皮细胞组成的内皮层与身体的其他组成部分(包括血液、循环细胞和淋巴系统)相互作用。在功能上,内皮细胞主要是同步调节血管张力(通过平衡血管扩张和血管收缩),防止血管炎症和病变。因此,内皮功能障碍会破坏血管平衡,导致血管损伤和疾病,如心脑血管疾病和代谢性疾病。在这篇观点/前瞻性文章中,我们探讨了最近发现的各种疾病亚群的内皮功能障碍机制,并对目前临床前治疗干预措施的优势和局限性进行了批判性评估。
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引用次数: 0
Author Correction: CB2 receptor activation inhibits the phagocytic function of microglia through activating ERK/AKT-Nurr1 signal pathways. 作者更正:CB2 受体激活可通过激活 ERK/AKT-Nurr1 信号通路抑制小胶质细胞的吞噬功能。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-01 DOI: 10.1038/s41401-024-01337-1
Qi-Wen Han, Qian-Hang Shao, Xiao-Tong Wang, Kai-Li Ma, Nai-Hong Chen, Yu-He Yuan
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引用次数: 0
NADPHnet: a novel strategy to predict compounds for regulation of NADPH metabolism via network-based methods. NADPHnet:通过基于网络的方法预测调节 NADPH 代谢的化合物的新策略。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-01 Epub Date: 2024-06-20 DOI: 10.1038/s41401-024-01324-6
Fei Pan, Cheng-Nuo Wang, Zhuo-Hang Yu, Zeng-Rui Wu, Ze Wang, Shang Lou, Wei-Hua Li, Gui-Xia Liu, Ting Li, Yu-Zheng Zhao, Yun Tang

Identification of compounds to modulate NADPH metabolism is crucial for understanding complex diseases and developing effective therapies. However, the complex nature of NADPH metabolism poses challenges in achieving this goal. In this study, we proposed a novel strategy named NADPHnet to predict key proteins and drug-target interactions related to NADPH metabolism via network-based methods. Different from traditional approaches only focusing on one single protein, NADPHnet could screen compounds to modulate NADPH metabolism from a comprehensive view. Specifically, NADPHnet identified key proteins involved in regulation of NADPH metabolism using network-based methods, and characterized the impact of natural products on NADPH metabolism using a combined score, NADPH-Score. NADPHnet demonstrated a broader applicability domain and improved accuracy in the external validation set. This approach was further employed along with molecular docking to identify 27 compounds from a natural product library, 6 of which exhibited concentration-dependent changes of cellular NADPH level within 100 μM, with Oxyberberine showing promising effects even at 10 μM. Mechanistic and pathological analyses of Oxyberberine suggest potential novel mechanisms to affect diabetes and cancer. Overall, NADPHnet offers a promising method for prediction of NADPH metabolism modulation and advances drug discovery for complex diseases.

鉴定调节 NADPH 代谢的化合物对于了解复杂疾病和开发有效疗法至关重要。然而,NADPH 代谢的复杂性给实现这一目标带来了挑战。在这项研究中,我们提出了一种名为 NADPHnet 的新策略,通过基于网络的方法预测与 NADPH 代谢相关的关键蛋白和药物靶点相互作用。与传统的只关注单一蛋白质的方法不同,NADPHnet 可以从全面的角度筛选调节 NADPH 代谢的化合物。具体来说,NADPHnet利用基于网络的方法确定了参与调控NADPH代谢的关键蛋白,并利用综合得分NADPH-Score表征了天然产物对NADPH代谢的影响。NADPHnet 的适用范围更广,外部验证集的准确性也有所提高。该方法与分子对接一起被进一步用于从天然产物库中鉴定 27 种化合物,其中 6 种化合物在 100 μM 的浓度范围内表现出细胞 NADPH 水平的浓度依赖性变化,而 Oxyberberine 甚至在 10 μM 的浓度范围内也表现出良好的效果。氧小檗碱的机理和病理分析表明,它具有影响糖尿病和癌症的潜在新机制。总之,NADPHnet 为预测 NADPH 代谢调节提供了一种有前途的方法,并推动了复杂疾病的药物发现。
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引用次数: 0
CircNSD1 promotes cardiac fibrosis through targeting the miR-429-3p/SULF1/Wnt/β-catenin signaling pathway. CircNSD1 通过靶向 miR-429-3p/SULF1/Wnt/β-catenin 信号通路促进心脏纤维化。
IF 6.9 1区 医学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-01 Epub Date: 2024-05-17 DOI: 10.1038/s41401-024-01296-7
Dong-Ni Ji, Sai-di Jin, Yuan Jiang, Fei-Yong Xu, Shu-Wei Fan, Yi-Lin Zhao, Xin-Qi Liu, Hao Sun, Wen-Zheng Cheng, Xin-Yue Zhang, Xiao-Xiang Guan, Bo-Wen Zhang, Zhi-Min Du, Ying Wang, Ning Wang, Rong Zhang, Ming-Yu Zhang, Chao-Qian Xu

Cardiac fibrosis is a detrimental pathological process, which constitutes the key factor for adverse cardiac structural remodeling leading to heart failure and other critical conditions. Circular RNAs (circRNAs) have emerged as important regulators of various cardiovascular diseases. It is known that several circRNAs regulate gene expression and pathological processes by binding miRNAs. In this study we investigated whether a novel circRNA, named circNSD1, and miR-429-3p formed an axis that controls cardiac fibrosis. We established a mouse model of myocardial infarction (MI) for in vivo studies and a cellular model of cardiac fibrogenesis in primary cultured mouse cardiac fibroblasts treated with TGF-β1. We showed that miR-429-3p was markedly downregulated in the cardiac fibrosis models. Through gain- and loss-of-function studies we confirmed miR-429-3p as a negative regulator of cardiac fibrosis. In searching for the upstream regulator of miR-429-3p, we identified circNSD1 that we subsequently demonstrated as an endogenous sponge of miR-429-3p. In MI mice, knockdown of circNSD1 alleviated cardiac fibrosis. Moreover, silence of human circNSD1 suppressed the proliferation and collagen production in human cardiac fibroblasts in vitro. We revealed that circNSD1 directly bound miR-429-3p, thereby upregulating SULF1 expression and activating the Wnt/β-catenin pathway. Collectively, circNSD1 may be a novel target for the treatment of cardiac fibrosis and associated cardiac disease.

心脏纤维化是一种有害的病理过程,是心脏结构重塑导致心力衰竭和其他危重症的关键因素。环状 RNA(circRNA)已成为各种心血管疾病的重要调控因子。众所周知,一些环状 RNA 通过结合 miRNA 来调控基因表达和病理过程。在这项研究中,我们探讨了一种名为 circNSD1 的新型 circRNA 是否与 miR-429-3p 形成了一个控制心脏纤维化的轴。我们建立了用于体内研究的心肌梗死(MI)小鼠模型,以及用 TGF-β1 处理原代培养的小鼠心脏成纤维细胞的心脏纤维化细胞模型。我们发现,miR-429-3p 在心脏纤维化模型中明显下调。通过功能增益和功能缺失研究,我们证实 miR-429-3p 是心脏纤维化的负调控因子。在寻找 miR-429-3p 上游调节因子的过程中,我们发现了 circNSD1,随后证明它是 miR-429-3p 的内源性海绵。在心肌梗死小鼠中,敲除 circNSD1 可减轻心脏纤维化。此外,人 circNSD1 的沉默抑制了体外人心脏成纤维细胞的增殖和胶原蛋白的产生。我们发现,circNSD1直接结合了miR-429-3p,从而上调了SULF1的表达,激活了Wnt/β-catenin通路。总之,circNSD1可能是治疗心脏纤维化和相关心脏疾病的新靶点。
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引用次数: 0
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Acta Pharmacologica Sinica
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