首页 > 最新文献

Acta Physiologiae Plantarum最新文献

英文 中文
Aluminum and iron interactions in the root zone and in planta of the Al-accumulator Amaranthus retroflexus 铝富集苋根区和植株内铝和铁的相互作用
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-20 DOI: 10.1007/s11738-025-03879-1
Fatemeh Nazari, Roghieh Hajiboland, Roser Tolra, Jelena Pavlovic, Tijana Dubljanin, Miroslav Nikolic, Charlotte Poschenrieder

Acidic soils are characterized by the co-occurrence of phytotoxic concentrations of aluminum (Al3+) and iron (Fe2+/Fe3+); however, the interactive effects of these elements within plants and the root environment remain poorly understood. In this study, Amaranthus retroflexus, an Al-accumulating species, was grown hydroponically at pH 4.0 in Al-free (–Al) control or treated with two levels of Al (50 µM, and 400 µM), in combination with either no Fe (–Fe), adequate Fe (20 µM Fe), or excess Fe (100 µM Fe). Leaf chlorosis was induced by Al in Fe-sufficient plants and intensified under Fe deficiency, coinciding with elevated ferric chelate reductase (FRO) activity in roots while Al reduced FRO activity under excess Fe supply. The leaf contents of phenolics and betacyanin increased with rising Al and Fe levels, peaking under the combined application of high Al and excess Fe. Both Fe deficiency and Fe toxicity stimulated the exudation of phenolics and organic acids. Citrate was the predominant carboxylate exuded by Al-free plants, whereas oxalate became dominant under high Al exposure. Aluminum and Fe treatments both reduced foliar accumulation of the other element, with indirect evidence suggesting that Al limits Fe mobility and bioavailability in leaf tissues. These findings demonstrate that A. retroflexus activates internal and external detoxification mechanisms in response to combined Al and Fe toxicity, highlighting a coordinated adaptive strategy for survival in acid soil environments.

酸性土壤以铝(Al3+)和铁(Fe2+/Fe3+)的植物毒性浓度共存为特征;然而,这些元素在植物和根环境中的相互作用仍然知之甚少。在本研究中,我们以一种富集铝的苋属植物逆转录苋(Amaranthus retroflexus)为研究对象,在pH为4.0的条件下,在无铝(-Al)对照中进行水培生长,或在两种水平的铝(50µM和400µM)下进行处理,同时加入无铁(-Fe)、充足铁(20µM Fe)或过量铁(100µM Fe)。富铁植株的叶片褪绿是由Al引起的,缺铁植株的叶片褪绿加剧,这与根系中铁螯合还原酶(FRO)活性升高而缺铁植株根系中铁螯合还原酶活性降低有关。叶片中酚类物质和β花青素含量随Al和Fe水平的升高而增加,在高Al和过量Fe联合施用下达到峰值。缺铁和铁中毒均刺激了酚类物质和有机酸的分泌。无铝植株分泌的羧酸盐以柠檬酸盐为主,高铝胁迫下草酸盐为主。铝和铁处理都降低了叶片中其他元素的积累,间接证据表明铝限制了铁在叶片组织中的流动性和生物利用度。这些研究结果表明,在铝和铁的联合毒性下,逆转录草激活了内部和外部的解毒机制,突出了在酸性土壤环境中生存的协调适应策略。
{"title":"Aluminum and iron interactions in the root zone and in planta of the Al-accumulator Amaranthus retroflexus","authors":"Fatemeh Nazari,&nbsp;Roghieh Hajiboland,&nbsp;Roser Tolra,&nbsp;Jelena Pavlovic,&nbsp;Tijana Dubljanin,&nbsp;Miroslav Nikolic,&nbsp;Charlotte Poschenrieder","doi":"10.1007/s11738-025-03879-1","DOIUrl":"10.1007/s11738-025-03879-1","url":null,"abstract":"<div><p>Acidic soils are characterized by the co-occurrence of phytotoxic concentrations of aluminum (Al<sup>3+</sup>) and iron (Fe<sup>2+</sup>/Fe<sup>3+</sup>); however, the interactive effects of these elements within plants and the root environment remain poorly understood. In this study, <i>Amaranthus retroflexus</i>, an Al-accumulating species, was grown hydroponically at pH 4.0 in Al-free (–Al) control or treated with two levels of Al (50 µM, and 400 µM), in combination with either no Fe (–Fe), adequate Fe (20 µM Fe), or excess Fe (100 µM Fe). Leaf chlorosis was induced by Al in Fe-sufficient plants and intensified under Fe deficiency, coinciding with elevated ferric chelate reductase (FRO) activity in roots while Al reduced FRO activity under excess Fe supply. The leaf contents of phenolics and betacyanin increased with rising Al and Fe levels, peaking under the combined application of high Al and excess Fe. Both Fe deficiency and Fe toxicity stimulated the exudation of phenolics and organic acids. Citrate was the predominant carboxylate exuded by Al-free plants, whereas oxalate became dominant under high Al exposure. Aluminum and Fe treatments both reduced foliar accumulation of the other element, with indirect evidence suggesting that Al limits Fe mobility and bioavailability in leaf tissues. These findings demonstrate that <i>A. retroflexus</i> activates internal and external detoxification mechanisms in response to combined Al and Fe toxicity, highlighting a coordinated adaptive strategy for survival in acid soil environments.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145831061","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mapping the plant genome: CRISPR/Cas9 as a toolkit for functional genomics 绘制植物基因组:CRISPR/Cas9作为功能基因组学的工具包
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-15 DOI: 10.1007/s11738-025-03872-8
Samar G. Thabet, Amr Elkelish, Mona F. A. Dawood, Fatmah Ahmed Safhi, Abdulrahman M. Alhudhaibi, Andreas Börner, Ahmad M. Alqudah

CRISPR/Cas9 technology has revolutionized plant science as a precise and efficient genome-editing tool. By enabling targeted modifications in specific genes and genomic regions, it has accelerated functional genomics and facilitated the identification of genes associated with complex agronomic traits such as drought tolerance, pest resistance, and improved nutritional content. Compared with traditional approaches, CRISPR/Cas9 provides rapid functional validation through targeted mutagenesis, supporting both gene discovery and trait improvement. Its versatility extends beyond model systems to major crops and wild relatives, thereby expanding opportunities for plant breeding and conservation. Recent advances, including base and prime editing, have further broadened its scope, enabling high-resolution dissection of regulatory networks and genetic pathways. By integrating genome editing into plant research, CRISPR/Cas9 offers powerful avenues for developing climate-resilient and high-yielding crops, contributing to global food security and sustainable agriculture.

CRISPR/Cas9技术作为一种精确、高效的基因组编辑工具,已经彻底改变了植物科学。通过实现对特定基因和基因组区域的靶向修饰,它加速了功能基因组学的发展,并促进了与复杂农艺性状(如抗旱性、抗虫害和改善营养成分)相关的基因的鉴定。与传统方法相比,CRISPR/Cas9通过靶向诱变提供快速功能验证,支持基因发现和性状改良。它的多功能性从模型系统扩展到主要作物和野生近缘种,从而扩大了植物育种和保护的机会。最近的进展,包括碱基和引物编辑,进一步扩大了它的范围,使高分辨率的解剖调节网络和遗传途径成为可能。通过将基因组编辑整合到植物研究中,CRISPR/Cas9为开发适应气候变化的高产作物提供了强有力的途径,为全球粮食安全和可持续农业做出了贡献。
{"title":"Mapping the plant genome: CRISPR/Cas9 as a toolkit for functional genomics","authors":"Samar G. Thabet,&nbsp;Amr Elkelish,&nbsp;Mona F. A. Dawood,&nbsp;Fatmah Ahmed Safhi,&nbsp;Abdulrahman M. Alhudhaibi,&nbsp;Andreas Börner,&nbsp;Ahmad M. Alqudah","doi":"10.1007/s11738-025-03872-8","DOIUrl":"10.1007/s11738-025-03872-8","url":null,"abstract":"<div><p>CRISPR/Cas9 technology has revolutionized plant science as a precise and efficient genome-editing tool. By enabling targeted modifications in specific genes and genomic regions, it has accelerated functional genomics and facilitated the identification of genes associated with complex agronomic traits such as drought tolerance, pest resistance, and improved nutritional content. Compared with traditional approaches, CRISPR/Cas9 provides rapid functional validation through targeted mutagenesis, supporting both gene discovery and trait improvement. Its versatility extends beyond model systems to major crops and wild relatives, thereby expanding opportunities for plant breeding and conservation. Recent advances, including base and prime editing, have further broadened its scope, enabling high-resolution dissection of regulatory networks and genetic pathways. By integrating genome editing into plant research, CRISPR/Cas9 offers powerful avenues for developing climate-resilient and high-yielding crops, contributing to global food security and sustainable agriculture.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145778749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metabolic responses induced by JA and SA in mitigating simulated drought stress in Rosa Damascena 茉莉酸和SA对大马士革玫瑰缓解模拟干旱胁迫的代谢响应
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-09 DOI: 10.1007/s11738-025-03870-w
Mina Khorami Moghadam, Mostafa Khoshhal Sarmast, Azim Ghasemnejad, Tatyana Savchenko

The regulatory functions that jasmonic acid (JA) and salicylic acid (SA) play in physiological processes when plants are subjected to water deficiency is not well understood currently. Therefore, this study was devised to analyze the regulatory role and antagonistic interactions between JA and SA that may ultimately play a role in mitigating drought stress. Experimental Rosa damascena plants were harvested at three different time points after having been subjected to 25%, 50% or 100% of the soil water holding capacity (WHC), utilizing R. damascena. The stomatal aperture was reduced greatly in JA-treated plants cultivated in simulated severe drought stress conditions; however, this reduction in stomata aperture was significantly restored upon exogenous application of SA. Additionally, SA applied to JA-treated, drought-stressed plants modulates proline content in both roots and shoots. Finally, the reduction of the total chlorophyll content was mediated by disruption of the stomata aperture, the augmented levels of antioxidant enzyme activity, and the proline content in JA-treated plants subjected to severe drought stress were all mitigated via the exogenous application of SA, suggesting that SA may modulate JA-induced stomatal closure, even under drought condition.

茉莉酸(jasmonic acid, JA)和水杨酸(salicylic acid, SA)在植物缺水生理过程中的调控作用目前尚不清楚。因此,本研究旨在分析JA和SA之间的调控作用和拮抗相互作用,最终可能在缓解干旱胁迫中发挥作用。在土壤持水能力(WHC)达到25%、50%和100%后,分别在3个不同的时间点收获大马士革玫瑰试验植株。在模拟严重干旱胁迫条件下,经ja处理的植株气孔孔径明显减小;然而,在外源施用SA后,气孔孔径的减少显著恢复。此外,在干旱胁迫的植物上施用SA可以调节根和芽中的脯氨酸含量。最后,在严重干旱胁迫下,外源施用SA可以缓解经ja处理的植株气孔破坏导致的总叶绿素含量的降低,抗氧化酶活性水平的提高和脯氨酸含量的增加,表明即使在干旱条件下,SA也可能调节ja诱导的气孔关闭。
{"title":"Metabolic responses induced by JA and SA in mitigating simulated drought stress in Rosa Damascena","authors":"Mina Khorami Moghadam,&nbsp;Mostafa Khoshhal Sarmast,&nbsp;Azim Ghasemnejad,&nbsp;Tatyana Savchenko","doi":"10.1007/s11738-025-03870-w","DOIUrl":"10.1007/s11738-025-03870-w","url":null,"abstract":"<div><p>The regulatory functions that jasmonic acid (JA) and salicylic acid (SA) play in physiological processes when plants are subjected to water deficiency is not well understood currently. Therefore, this study was devised to analyze the regulatory role and antagonistic interactions between JA and SA that may ultimately play a role in mitigating drought stress. Experimental <i>Rosa damascena</i> plants were harvested at three different time points after having been subjected to 25%, 50% or 100% of the soil water holding capacity (WHC), utilizing <i>R. damascena</i>. The stomatal aperture was reduced greatly in JA-treated plants cultivated in simulated severe drought stress conditions; however, this reduction in stomata aperture was significantly restored upon exogenous application of SA. Additionally, SA applied to JA-treated, drought-stressed plants modulates proline content in both roots and shoots. Finally, the reduction of the total chlorophyll content was mediated by disruption of the stomata aperture, the augmented levels of antioxidant enzyme activity, and the proline content in JA-treated plants subjected to severe drought stress were all mitigated via the exogenous application of SA, suggesting that SA may modulate JA-induced stomatal closure, even under drought condition.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145729833","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of exogenous methyl jasmonate in alleviating salt and cadmium-induced toxicity in ryegrass (Lolium perenne L.) 外源茉莉酸甲酯缓解盐镉对黑麦草(Lolium perenne L.)毒性的作用
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-09 DOI: 10.1007/s11738-025-03871-9
Ting Wei, Rongyi Hu, Yuyao Wang, Xingkai Zhang, Yinping Bai, Chao Zhang

Methyl jasmonate (MeJA), a signal molecule, plays an essential role in growth, development and defense responses in various plants. However, its role in ryegrass in the response to salt (NaCl) and/or cadmium (Cd) stress remains poorly understood. In this study, the role of exogenous MeJA in alleviating NaCl and Cd-induced toxicity in ryegrass was investigated. According to the results, MeJA application increased the shoot dry weight in NaCl, Cd, Cd + NaCl stressed ryegrass by 5.66%, 7.49% and 12.84%, meanwhile, the root dry weight increased by 12.59%, 4.87% and 13.85%, respectively. Besides, MeJA significantly increased the chlorophyll and carotenoid content in leaves of the stressed ryegrass. It also resulted in lower levels of H2O2, O2 and MDA accumulation via enhancing the antioxidant contents (AsA, GSH, total phenols and flavonoids) and antioxidant enzymes (POD, CAT, APX) activities. Moreover, foliar application of MeJA elevated the soluble protein, soluble sugar content and stimulated mineral nutrient (Mg, K, Ca, Fe, Cu and Zn) uptake while decreased Na+ and Cd2+ accumulation. Therefore, MeJA could help to alleviate salt and/or Cd induced toxicity in ryegrass and act as a helpful tool for improving plant performance under salt and/or Cd stress.

茉莉酸甲酯(Methyl jasmonate, MeJA)是一种信号分子,在多种植物的生长发育和防御反应中起着重要作用。然而,它在黑麦草中对盐(NaCl)和/或镉(Cd)胁迫的响应中的作用仍然知之甚少。本研究探讨了外源MeJA在缓解NaCl和cd诱导的黑麦草毒性中的作用。结果表明,在NaCl、Cd、Cd + NaCl胁迫下,施用MeJA使黑麦草地上部干重分别提高了5.66%、7.49%和12.84%,根系干重分别提高了12.59%、4.87%和13.85%。此外,MeJA处理显著提高了胁迫黑麦草叶片叶绿素和类胡萝卜素含量。通过提高抗氧化剂含量(AsA、GSH、总酚和类黄酮)和抗氧化酶(POD、CAT、APX)活性,降低H2O2、O2−和MDA的积累水平。叶面施用MeJA提高了可溶性蛋白和可溶性糖含量,促进了矿质养分(Mg、K、Ca、Fe、Cu和Zn)的吸收,降低了Na+和Cd2+的积累。因此,MeJA可以缓解盐和/或Cd胁迫下黑麦草的毒性,并可作为提高盐和/或Cd胁迫下植物生产性能的有用工具。
{"title":"The role of exogenous methyl jasmonate in alleviating salt and cadmium-induced toxicity in ryegrass (Lolium perenne L.)","authors":"Ting Wei,&nbsp;Rongyi Hu,&nbsp;Yuyao Wang,&nbsp;Xingkai Zhang,&nbsp;Yinping Bai,&nbsp;Chao Zhang","doi":"10.1007/s11738-025-03871-9","DOIUrl":"10.1007/s11738-025-03871-9","url":null,"abstract":"<div>\u0000 \u0000 <p>Methyl jasmonate (MeJA), a signal molecule, plays an essential role in growth, development and defense responses in various plants. However, its role in ryegrass in the response to salt (NaCl) and/or cadmium (Cd) stress remains poorly understood. In this study, the role of exogenous MeJA in alleviating NaCl and Cd-induced toxicity in ryegrass was investigated. According to the results, MeJA application increased the shoot dry weight in NaCl, Cd, Cd + NaCl stressed ryegrass by 5.66%, 7.49% and 12.84%, meanwhile, the root dry weight increased by 12.59%, 4.87% and 13.85%, respectively. Besides, MeJA significantly increased the chlorophyll and carotenoid content in leaves of the stressed ryegrass. It also resulted in lower levels of H<sub>2</sub>O<sub>2</sub>, O<sub>2</sub><sup>−</sup> and MDA accumulation via enhancing the antioxidant contents (AsA, GSH, total phenols and flavonoids) and antioxidant enzymes (POD, CAT, APX) activities. Moreover, foliar application of MeJA elevated the soluble protein, soluble sugar content and stimulated mineral nutrient (Mg, K, Ca, Fe, Cu and Zn) uptake while decreased Na<sup>+</sup> and Cd<sup>2+</sup> accumulation. Therefore, MeJA could help to alleviate salt and/or Cd induced toxicity in ryegrass and act as a helpful tool for improving plant performance under salt and/or Cd stress.</p>\u0000 </div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145729831","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The formation of autophagosomes in the development process of rice endosperm is affected by endogenous ascorbic acid 水稻胚乳发育过程中自噬体的形成受内源抗坏血酸的影响
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-09 DOI: 10.1007/s11738-025-03876-4
Le Yu, Mengwei Chen, Haoran Yan, Zeliang Ouyang, Xinyu Liu, Sitong Lin, Yixuan Tang, Zhipeng Xu, Chunyu Liu, Peiyi Chen, Liping Zhou, Yonghai Liu

Autophagy plays an important role in regulating the development of rice endosperm cells. In this study, to investigate the possible relationship between ascorbic acid (Asc) and autophagy in the process of rice endosperm development, we hypothesized that altered endogenous Asc levels would influence autophagic activity, thereby affecting nitrogen remobilization and grain quality in rice. To test this, the distribution and number of autophagosomes/autophagy-related structures in mesophyll cells and endosperm cells, the gene transcript abundances related to senescence and autophagy, and the enzyme activity and gene transcript abundances related to nitrogen metabolism were analyzed. The results showed that the altered levels of Asc lead to a change in the expression of senescence and autophagy associated genes, and Asc deficiency decreases the number of autophagosomes/autophagy-related structures in rice leaf mesophyll and endosperm cells, while higher Asc level increases them. Meanwhile, Asc also affects the nitrogen metabolism in rice grains by affecting the activities of key enzymes for nitrogen metabolism.

自噬在水稻胚乳细胞发育中起着重要的调节作用。为了探究水稻胚乳发育过程中抗坏血酸(Asc)与自噬之间的可能关系,我们假设内源Asc水平的改变会影响自噬活性,从而影响水稻氮素的再激活和籽粒品质。为了验证这一点,我们分析了叶肉细胞和胚乳细胞中自噬体/自噬相关结构的分布和数量,衰老和自噬相关基因转录丰度,氮代谢相关酶活性和基因转录丰度。结果表明,Asc水平的改变导致衰老和自噬相关基因的表达发生变化,Asc缺乏导致水稻叶肉细胞和胚乳细胞中自噬小体/自噬相关结构的数量减少,而Asc水平升高则导致自噬相关结构的数量增加。同时,Asc还通过影响氮代谢关键酶的活性来影响水稻籽粒的氮代谢。
{"title":"The formation of autophagosomes in the development process of rice endosperm is affected by endogenous ascorbic acid","authors":"Le Yu,&nbsp;Mengwei Chen,&nbsp;Haoran Yan,&nbsp;Zeliang Ouyang,&nbsp;Xinyu Liu,&nbsp;Sitong Lin,&nbsp;Yixuan Tang,&nbsp;Zhipeng Xu,&nbsp;Chunyu Liu,&nbsp;Peiyi Chen,&nbsp;Liping Zhou,&nbsp;Yonghai Liu","doi":"10.1007/s11738-025-03876-4","DOIUrl":"10.1007/s11738-025-03876-4","url":null,"abstract":"<div><p>Autophagy plays an important role in regulating the development of rice endosperm cells. In this study, to investigate the possible relationship between ascorbic acid (Asc) and autophagy in the process of rice endosperm development, we hypothesized that altered endogenous Asc levels would influence autophagic activity, thereby affecting nitrogen remobilization and grain quality in rice. To test this, the distribution and number of autophagosomes/autophagy-related structures in mesophyll cells and endosperm cells, the gene transcript abundances related to senescence and autophagy, and the enzyme activity and gene transcript abundances related to nitrogen metabolism were analyzed. The results showed that the altered levels of Asc lead to a change in the expression of senescence and autophagy associated genes, and Asc deficiency decreases the number of autophagosomes/autophagy-related structures in rice leaf mesophyll and endosperm cells, while higher Asc level increases them. Meanwhile, Asc also affects the nitrogen metabolism in rice grains by affecting the activities of key enzymes for nitrogen metabolism.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145729983","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of shoot composition and phenotype in Bt-transgenic and conventional potatoes 转bt与普通马铃薯茎部组成及表型比较
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-09 DOI: 10.1007/s11738-025-03873-7
Hassan Rahnama, Amir Bahram Moradi, Foad Moradi, Nafiseh Noormohamadi

Integrating foreign gene into a plant’s genome through genetic engineering can lead to insertion, deletion, and re-arrangement phenomena, potentially causing unintended effects in transgenic plants. This research endeavor aimed to compare the phenotypic characteristics and chemical compositions observed in the shoots of Bt- transgenic potato lines (Solanum tuberosum L.). The primary goal of this study was to assess whether any unintended changes have occurred as a result of genetic transformation in plants when compared to their non-transgenic counterparts. A correlation was discerned between the cry1Ab transcript level and Cry1Ab protein content during various phases of the plant growth. However, no marked association was detected between the copy number of the gene and the level of its protein expression. The phenotypic assessment showed differences between transgenic and non-transgenic lines, which may be due to somaclonal variations, a common occurrence during tissue culture in potato genetic transformation. Moreover, the expression of recombined proteins and the insertional effects of the transgenes may have contributed to unintentional variations in composition and phenotypic characteristics between transgenic and non-transgenic control line. Despite significant differences in amino acid levels between transgenic and non-transgenic potato plants, all changes in the metabolite levels fell within the acceptable range for potato cultivars. Hence, the chemical composition of the genetically modified potato plants was equivalent to their non-transgenic counterpart. In conclusion, the results indicated that transgenic potato lines are as safe as non-transgenic control plants.

通过基因工程将外源基因整合到植物基因组中会导致插入、删除和重排现象,可能会对转基因植物产生意想不到的影响。本研究旨在比较转Bt基因马铃薯(Solanum tuberosum L.)植株的表型特征和化学成分。本研究的主要目的是评估与非转基因植物相比,植物的遗传转化是否发生了任何意想不到的变化。在植物生长的各个阶段,cry1Ab转录物水平与cry1Ab蛋白含量之间存在相关性。然而,在基因拷贝数和其蛋白表达水平之间没有发现明显的关联。表型分析显示转基因和非转基因品系之间存在差异,这可能是由于马铃薯遗传转化过程中组织培养过程中常见的体细胞无性系变异所致。此外,重组蛋白的表达和转基因基因的插入效应可能导致转基因和非转基因控制系之间的组成和表型特征的无意差异。尽管转基因和非转基因马铃薯植株之间氨基酸水平存在显著差异,但所有代谢物水平的变化都在马铃薯品种可接受的范围内。因此,转基因马铃薯的化学成分与非转基因马铃薯相同。总之,结果表明转基因马铃薯品系与非转基因对照植物一样安全。
{"title":"Comparison of shoot composition and phenotype in Bt-transgenic and conventional potatoes","authors":"Hassan Rahnama,&nbsp;Amir Bahram Moradi,&nbsp;Foad Moradi,&nbsp;Nafiseh Noormohamadi","doi":"10.1007/s11738-025-03873-7","DOIUrl":"10.1007/s11738-025-03873-7","url":null,"abstract":"<div><p>Integrating foreign gene into a plant’s genome through genetic engineering can lead to insertion, deletion, and re-arrangement phenomena, potentially causing unintended effects in transgenic plants. This research endeavor aimed to compare the phenotypic characteristics and chemical compositions observed in the shoots of Bt- transgenic potato lines (<i>Solanum tuberosum</i> L.). The primary goal of this study was to assess whether any unintended changes have occurred as a result of genetic transformation in plants when compared to their non-transgenic counterparts. A correlation was discerned between the <i>cry1Ab</i> transcript level and Cry1Ab protein content during various phases of the plant growth. However, no marked association was detected between the copy number of the gene and the level of its protein expression. The phenotypic assessment showed differences between transgenic and non-transgenic lines, which may be due to somaclonal variations, a common occurrence during tissue culture in potato genetic transformation. Moreover, the expression of recombined proteins and the insertional effects of the transgenes may have contributed to unintentional variations in composition and phenotypic characteristics between transgenic and non-transgenic control line. Despite significant differences in amino acid levels between transgenic and non-transgenic potato plants, all changes in the metabolite levels fell within the acceptable range for potato cultivars. Hence, the chemical composition of the genetically modified potato plants was equivalent to their non-transgenic counterpart. In conclusion, the results indicated that transgenic potato lines are as safe as non-transgenic control plants.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145729836","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Management of water resources in delayed-flooding rice (Oryza sativa) cultivation subjected to bulk and Nano-molecules of chitosan and silicon 壳聚糖和纳米分子硅对延迟淹水水稻水资源管理的影响
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-09 DOI: 10.1007/s11738-025-03874-6
Shokoofeh Hajihashemi, Amal Chabipoor

Effective water management in crops with high water requirements, such as rice, demands research to establish accurate irrigation systems for sustainable use of resources and ensuring feeding the world’s population at the same time. This research investigated how both bulk and nanoparticles forms of chitosan (Ch) and silicon (Si) on rice performance under delayed-flooding irrigation. The experiment involved applying foliar treatments of distilled water (control), Ch (0.05% w/v), nano-Ch (NCh; 0.05% w/v), Si (0.05% w/v), nano-Si (NSi; 0.05% w/v) and NCh-NSi (0.1% w/v) to 25 days old plants. The plant cultivation was carried out using a two-stage irrigation approach. Initially, for the first 40 days, the plants were irrigated to saturation. Then, a permanent flooding regime was established starting 40 days after sowing. Various plant traits including culm characteristics (wall thickness, major vascular bundle area, and thickness of mechanical and parenchyma layers), leaf features (thickness, length and dry mass) and grain characteristics (filled spikelet, and dry mass, length and number of fertile panicle) were enhanced under various treatments. Further, foliar treatments increased photosynthetic pigments, phenols, flavonoids, anthocyanins, carbohydrates, protein, proline, activity of catalase and ascorbate peroxidase, and total antioxidant activity. Overall, the bulk and nano-forms of Ch and Si improved rice-cropping system in the delayed-flooding conditions, with the highest yield achieved in NCh-NSi treatment. In conclusion, eco-friendly chitosan nanoparticles combined with Si offer a promising approach to boost crop yield and improve water resource management, especially in the face of climate change and water scarcity.

对水稻等需水量高的作物进行有效的水管理,需要研究建立精确的灌溉系统,以实现资源的可持续利用,同时确保养活世界人口。本研究考察了壳聚糖(Ch)和硅(Si)的体积形态和纳米形态对延迟淹水灌溉条件下水稻生产性能的影响。试验采用蒸馏水(对照)、Ch (0.05% w/v)、nano-Ch (NCh; 0.05% w/v)、Si (0.05% w/v)、nano-Si (NSi; 0.05% w/v)和NCh-NSi (0.1% w/v)处理25日龄植株。植物种植采用两阶段灌溉方法进行。最初,在最初的40天里,植物被灌溉至饱和。然后,在播种后40天开始建立永久的洪水制度。在不同处理下,茎秆特征(壁厚、主维管束面积、机械层和薄壁层厚度)、叶片特征(厚度、长度和干质量)和籽粒特征(饱满小穗、干质量、可育穗长度和数量)均有显著提高。此外,叶面处理增加了光合色素、酚类、类黄酮、花青素、碳水化合物、蛋白质、脯氨酸、过氧化氢酶和抗坏血酸过氧化物酶的活性以及总抗氧化活性。总体而言,大面积和纳米形式的Ch和Si改善了延迟淹水条件下的水稻种植制度,其中NCh-NSi处理的产量最高。综上所述,生态友好型壳聚糖纳米颗粒与硅的结合为提高作物产量和改善水资源管理提供了一种有希望的方法,特别是在面对气候变化和水资源短缺的情况下。
{"title":"Management of water resources in delayed-flooding rice (Oryza sativa) cultivation subjected to bulk and Nano-molecules of chitosan and silicon","authors":"Shokoofeh Hajihashemi,&nbsp;Amal Chabipoor","doi":"10.1007/s11738-025-03874-6","DOIUrl":"10.1007/s11738-025-03874-6","url":null,"abstract":"<div><p>Effective water management in crops with high water requirements, such as rice, demands research to establish accurate irrigation systems for sustainable use of resources and ensuring feeding the world’s population at the same time. This research investigated how both bulk and nanoparticles forms of chitosan (Ch) and silicon (Si) on rice performance under delayed-flooding irrigation. The experiment involved applying foliar treatments of distilled water (control), Ch (0.05% w/v), nano-Ch (NCh; 0.05% w/v), Si (0.05% w/v), nano-Si (NSi; 0.05% w/v) and NCh-NSi (0.1% w/v) to 25 days old plants. The plant cultivation was carried out using a two-stage irrigation approach. Initially, for the first 40 days, the plants were irrigated to saturation. Then, a permanent flooding regime was established starting 40 days after sowing. Various plant traits including culm characteristics (wall thickness, major vascular bundle area, and thickness of mechanical and parenchyma layers), leaf features (thickness, length and dry mass) and grain characteristics (filled spikelet, and dry mass, length and number of fertile panicle) were enhanced under various treatments. Further, foliar treatments increased photosynthetic pigments, phenols, flavonoids, anthocyanins, carbohydrates, protein, proline, activity of catalase and ascorbate peroxidase, and total antioxidant activity. Overall, the bulk and nano-forms of Ch and Si improved rice-cropping system in the delayed-flooding conditions, with the highest yield achieved in NCh-NSi treatment. In conclusion, eco-friendly chitosan nanoparticles combined with Si offer a promising approach to boost crop yield and improve water resource management, especially in the face of climate change and water scarcity.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145729835","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Wound-induced dynamics of selected auxins and jasmonates suggest interhormonal crosstalk during the induction phase of adventitious root formation in Prunus subhirtella ‘Autumnalis’ 特定生长素和茉莉酸盐的损伤诱导动态表明,在秋李不定根形成诱导阶段存在激素间串扰。
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-09 DOI: 10.1007/s11738-025-03877-3
Petra Kunc, Aljaz Medic, Gregor Osterc

Adventitious root (AR) formation is a complex developmental response modulated by a network of phytohormones. While auxins such as indole-3-acetic acid (IAA) are well-established drivers of AR induction, emerging evidence highlights the involvement of jasmonates in regulating wound-induced and stress-related developmental programs. This study investigates the temporal dynamics of selected auxins (IAA, IAA-Asp) and jasmonates (jasmonic acid, JA, and its bioactive conjugate JA-Ile) during the early phase of AR formation in leafy cuttings of Prunus subhirtella ‘Autumnalis’. Hormonal profiling was conducted in the basal (rooting) region of cuttings at seven time points (0 min, 15 min, 30 min, 45 min, 2 h, 4 h, and 24 h) following severance. In addition, jasmonate dynamics were evaluated in the apical, unwounded part of the same cutting—specifically, shoot tip including developing leaves. The results revealed rapid, transient peaks of JA and JA-Ile in both tissues within the first few hours post-wounding, followed by a delayed but progressive accumulation of IAA and IAA-Asp in the basal region. This tissue-specific and temporally offset hormonal pattern suggests that JA-related wound signaling may precede and potentially facilitate auxin accumulation required for root induction. Overall, this study establishes Prunus subhirtella ‘Autumnalis’ as a valuable woody model for investigating hormone-mediated adventitious root formation and provides a framework for exploring interhormonal crosstalk in vegetative propagation.

不定根(AR)的形成是一个复杂的发育反应,由植物激素网络调节。虽然生长素如吲哚-3-乙酸(IAA)是AR诱导的公认驱动因素,但新出现的证据强调茉莉酸盐参与调节伤口诱导和应激相关的发育程序。研究了秋李(Prunus subhirtella’autumn nalis)叶插条AR形成早期部分生长素(IAA、IAA- asp)和茉莉酸(jasmonic acid, JA及其生物活性偶联物JA- ile)的时间动态。在断枝后的7个时间点(0分钟、15分钟、30分钟、45分钟、2小时、4小时和24小时)对插枝基部(生根区)进行激素分析。此外,还对同一扦插的顶端、未受伤部分(具体而言,包括发育中的叶片在内的茎尖)的茉莉酸动态进行了评估。结果显示,在损伤后的最初几个小时内,JA和JA- ile在两个组织中迅速、短暂地达到峰值,随后IAA和IAA- asp在基底区缓慢但渐进地积累。这种组织特异性和暂时性抵消的激素模式表明,与ja相关的伤口信号可能先于并可能促进根诱导所需的生长素积累。综上所述,本研究确立了秋李(Prunus subhirtella’autumn nalis)作为研究激素介导不定根形成的有价值的木本模型,并为探索无性繁殖中的激素间串扰提供了框架。
{"title":"Wound-induced dynamics of selected auxins and jasmonates suggest interhormonal crosstalk during the induction phase of adventitious root formation in Prunus subhirtella ‘Autumnalis’","authors":"Petra Kunc,&nbsp;Aljaz Medic,&nbsp;Gregor Osterc","doi":"10.1007/s11738-025-03877-3","DOIUrl":"10.1007/s11738-025-03877-3","url":null,"abstract":"<div>\u0000 \u0000 <p>Adventitious root (AR) formation is a complex developmental response modulated by a network of phytohormones. While auxins such as indole-3-acetic acid (IAA) are well-established drivers of AR induction, emerging evidence highlights the involvement of jasmonates in regulating wound-induced and stress-related developmental programs. This study investigates the temporal dynamics of selected auxins (IAA, IAA-Asp) and jasmonates (jasmonic acid, JA, and its bioactive conjugate JA-Ile) during the early phase of AR formation in leafy cuttings of <i>Prunus subhirtella</i> ‘Autumnalis’. Hormonal profiling was conducted in the basal (rooting) region of cuttings at seven time points (0 min, 15 min, 30 min, 45 min, 2 h, 4 h, and 24 h) following severance. In addition, jasmonate dynamics were evaluated in the apical, unwounded part of the same cutting—specifically, shoot tip including developing leaves. The results revealed rapid, transient peaks of JA and JA-Ile in both tissues within the first few hours post-wounding, followed by a delayed but progressive accumulation of IAA and IAA-Asp in the basal region. This tissue-specific and temporally offset hormonal pattern suggests that JA-related wound signaling may precede and potentially facilitate auxin accumulation required for root induction. Overall, this study establishes <i>Prunus subhirtella</i> ‘Autumnalis’ as a valuable woody model for investigating hormone-mediated adventitious root formation and provides a framework for exploring interhormonal crosstalk in vegetative propagation.</p>\u0000 </div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s11738-025-03877-3.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145729832","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tomato SlAP2e differentially regulates plant basal immunity against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000 番茄SlAP2e对番茄灰霉病菌和丁香假单胞菌基础免疫的差异调控番茄DC3000
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-11-27 DOI: 10.1007/s11738-025-03862-w
Lili Zhang, Kaige Liu, Zongwen Zhu, Yuelu Zhao, Yunpeng Song

Ethylene responsive factors (ERFs) play pivotal roles in regulating plant response to environmental stresses. An increasing body of studies have been published on characterizing the function of ERFs in plants. However, there are very few reports regarding stress-related ERF proteins available in tomato. Here, the function of SlAP2e, a nucleus-localized transcription factor from tomato, in plant immune response against pathogens was characterized. Expression of SlAP2e could be induced by MeJA, ACC and SA. Transcriptional activation assays using yeast two-hybrid system demonstrated that SlAP2e functions as a transcriptional activator in yeast. Ectopic expression of SlAP2e in Arabidopsis confers increased resistance to necrotrophic fungus Botrytis cinerea but decreased resistance to hemibiotrophic bacteria Pseudomonas syringae pv. tomato DC3000. SlAP2e transgenic plants showed improved ROS-scavenging ability under H2O2 stress. Real-time RT-PCR results indicated that pathogenesis-related (PR) genes (AtPR1 and AtPR5) respond differentially to Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000. All research data demonstrate that SlAP2e acts as an immune regulator that may endow the plants with differential responses to necrotrophic and biotrophic pathogens in Arabidopsis. SlAP2e can have potential beneficial effects in the genetic improvement of economically important crops.

乙烯响应因子(ERFs)在调控植物对环境胁迫的响应中起着关键作用。关于erf在植物中的功能的研究越来越多。然而,关于番茄中与应激相关的ERF蛋白的报道很少。本文研究了番茄核定位转录因子SlAP2e在植物抗病原体免疫应答中的作用。MeJA、ACC和SA均能诱导SlAP2e的表达。酵母双杂交系统的转录激活实验表明,SlAP2e在酵母中具有转录激活剂的功能。SlAP2e在拟南芥中的异位表达增加了对坏死性真菌灰霉病菌的抗性,但降低了对半生物营养细菌丁香假单胞菌的抗性。番茄DC3000。SlAP2e转基因植株在H2O2胁迫下具有较强的ros清除能力。实时RT-PCR结果显示,致病相关基因AtPR1和AtPR5对灰葡萄孢杆菌和丁香假单胞菌的反应存在差异。番茄DC3000。所有研究数据表明,SlAP2e作为一种免疫调节剂,可能使拟南芥对坏死性和生物营养性病原体产生不同的反应。SlAP2e在重要经济作物的遗传改良中具有潜在的有益作用。
{"title":"Tomato SlAP2e differentially regulates plant basal immunity against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000","authors":"Lili Zhang,&nbsp;Kaige Liu,&nbsp;Zongwen Zhu,&nbsp;Yuelu Zhao,&nbsp;Yunpeng Song","doi":"10.1007/s11738-025-03862-w","DOIUrl":"10.1007/s11738-025-03862-w","url":null,"abstract":"<div><p>Ethylene responsive factors (ERFs) play pivotal roles in regulating plant response to environmental stresses. An increasing body of studies have been published on characterizing the function of ERFs in plants. However, there are very few reports regarding stress-related ERF proteins available in tomato. Here, the function of SlAP2e, a nucleus-localized transcription factor from tomato, in plant immune response against pathogens was characterized. Expression of <i>SlAP2e</i> could be induced by MeJA, ACC and SA. Transcriptional activation assays using yeast two-hybrid system demonstrated that SlAP2e functions as a transcriptional activator in yeast. Ectopic expression of <i>SlAP2e</i> in <i>Arabidopsis</i> confers increased resistance to necrotrophic fungus <i>Botrytis cinerea</i> but decreased resistance to hemibiotrophic bacteria <i>Pseudomonas syringae</i> pv. <i>tomato</i> DC3000. <i>SlAP2e</i> transgenic plants showed improved ROS-scavenging ability under H<sub>2</sub>O<sub>2</sub> stress. Real-time RT-PCR results indicated that pathogenesis-related (PR) genes (<i>AtPR1</i> and <i>AtPR5</i>) respond differentially to <i>Botrytis cinerea</i> and <i>Pseudomonas syringae</i> pv. <i>tomato</i> DC3000. All research data demonstrate that SlAP2e acts as an immune regulator that may endow the plants with differential responses to necrotrophic and biotrophic pathogens in <i>Arabidopsis</i>. SlAP2e can have potential beneficial effects in the genetic improvement of economically important crops.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"48 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145600862","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular authentication of acanthopanacis cortex and its analogues using DNA barcoding 棘五加皮质及其类似物的DNA条形码分子鉴定
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-11-19 DOI: 10.1007/s11738-025-03869-3
Mengdi Zheng, Long Guo, Qi Zhang, Xingjun Wang

To distiguish Acanthopanacis Cortex from its analogues, and to screen suitable DNA barcodes, the ITS2 and its secondary structure, matK and psbA-trnH were used. A total of 74 sequences encompassing 6 taxa representing Acanthopanacis Cortex and its analogues were collected from its main distributing area and GenBank. Samples were assessed by PCR amplification, sequencing, sequence quality, extent of specific genetic divergence, DNA barcoding gap, and the ability to discriminate between species. The results of NJ trees based on the three DNA barcodes showed that all the species could be distinguished from each other and branched independently, showing good monophyly. The topological structure of ITS2 PNJ phylogenetic tree was consistent with that of NJ tree. The interspecific genetic distance between Acanthopanacis Cortex and its analogues was significantly greater than the intraspecific genetic distance. The secondary structure of ITS2 was significantly different among species. All the three DNA barcodes could be used as molecular marker to differentiate Acanthopanacis Cortex from its analogues, however the intergeneric identification efficiency was the best in ITS2, followed by matK and psbA-trnH. Therefore, ITS2 as the dominant identification method supplemented by matK and psbA-trnH DNA barcodes are recommended in this study to provide scientific basis for Acanthopanacis Cortex identificationand safety of clinical use.

为了区分棘五加皮质及其类似物,并筛选合适的DNA条形码,使用ITS2及其二级结构matK和psbA-trnH。从棘五加(Acanthopanacis Cortex)主要分布区和GenBank中收集了棘五加(Acanthopanacis Cortex)及其类似物的6个分类群共74条序列。通过PCR扩增、测序、序列质量、特异性遗传差异程度、DNA条形码间隙和物种间区分能力对样品进行评估。基于3个DNA条形码的NJ树的结果表明,所有物种都可以相互区分并独立分支,具有良好的单系性。ITS2 PNJ系统发育树的拓扑结构与NJ树的拓扑结构一致。棘五加及其类似物的种间遗传距离显著大于种内遗传距离。ITS2的二级结构在不同物种间存在显著差异。3种DNA条形码均可作为棘五加皮质与类似物的分子标记,但ITS2的属间鉴定效率最高,其次是matK和psbA-trnH。因此,本研究推荐以ITS2为优势鉴定方法,辅以matK和psbA-trnH DNA条形码,为棘五加皮鉴定及临床安全使用提供科学依据。
{"title":"Molecular authentication of acanthopanacis cortex and its analogues using DNA barcoding","authors":"Mengdi Zheng,&nbsp;Long Guo,&nbsp;Qi Zhang,&nbsp;Xingjun Wang","doi":"10.1007/s11738-025-03869-3","DOIUrl":"10.1007/s11738-025-03869-3","url":null,"abstract":"<div><p>To distiguish Acanthopanacis Cortex from its analogues, and to screen suitable DNA barcodes, the ITS2 and its secondary structure, <i>matK</i> and psbA-trnH were used. A total of 74 sequences encompassing 6 taxa representing Acanthopanacis Cortex and its analogues were collected from its main distributing area and GenBank. Samples were assessed by PCR amplification, sequencing, sequence quality, extent of specific genetic divergence, DNA barcoding gap, and the ability to discriminate between species. The results of NJ trees based on the three DNA barcodes showed that all the species could be distinguished from each other and branched independently, showing good monophyly. The topological structure of ITS2 PNJ phylogenetic tree was consistent with that of NJ tree. The interspecific genetic distance between Acanthopanacis Cortex and its analogues was significantly greater than the intraspecific genetic distance. The secondary structure of ITS2 was significantly different among species. All the three DNA barcodes could be used as molecular marker to differentiate Acanthopanacis Cortex from its analogues, however the intergeneric identification efficiency was the best in ITS2, followed by <i>matK</i> and psbA-trnH. Therefore, ITS2 as the dominant identification method supplemented by <i>matK</i> and psbA-trnH DNA barcodes are recommended in this study to provide scientific basis for Acanthopanacis Cortex identificationand safety of clinical use.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"47 12","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145561307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Acta Physiologiae Plantarum
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1