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Differentially expressed proteins confer thermotolerance in rooibos (Aspalathus linearis, (Burm.f.) R.Dahlgren) 不同表达的蛋白赋予路易波士(Aspalathus linearis,缅甸)耐热性。R.Dahlgren)
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-08-23 DOI: 10.1007/s11738-025-03828-y
Dunja MacAlister, Suhail Rafudeen, Hawwa Gabier, A. Muthama Muasya, John B. O. Ogola, Carl-Otto Ottosen, Eva Rosenqvist, Samson B. M. Chimphango

Aspalathus linearis (Burm.f.) R.Dahlgren, or rooibos, is an important commercial crop in the Western Cape, South Africa. The growth rate of rooibos is highest during the hot, dry summers typical for this region. This suggests that the plants have a wide range of adaptive responses including morphological, physiological, molecular, and biochemical mechanisms that help them cope with drought and heat stress. This study investigates differential expression of proteins in leaf samples harvested in summer from rooibos plants at two relatively cool, and two relatively hot sites in the Cederberg region. A total of 180 proteins were differentially expressed and of these, 113 proteins were more abundant at cooler sites while 67 proteins were more abundant at the heat-stressed (HS) sites. The higher temperatures at the HS sites led to a reduced protein abundance due to temperature thresholds for protein production during HS. Heat shock proteins were more abundant in the HS plants indicating an enhanced thermotolerance. Plants at the cooler sites overexpressed proteins associated with aiding photosynthesis and protecting photosystems, resulting in better photosynthetic rates and biomass accumulation. High light and moderate HS conditions prompted the regulation of proteins involved in chlorophyll synthesis and light protection to maintain effective functioning. Proteins involved in oxidative stress responses were expressed in plants at all sites, which was mirrored by high concentrations of antioxidants. Rooibos thermotolerance relies on the expression of HSPs and oxidative stress response proteins, while photosynthesis-related proteins dominate the cooler sites, optimizing their function and ultimately growth.

芦笋(缅甸)路易波士是南非西开普省一种重要的商业作物。在该地区典型的炎热干燥的夏季,路易波士威士忌的增长率最高。这表明植物具有广泛的适应机制,包括形态、生理、分子和生化机制,帮助它们应对干旱和热胁迫。本研究调查了夏季在Cederberg地区两个相对凉爽和两个相对炎热的地点收获的路易波士植物叶片样品中蛋白质的差异表达。共有180个蛋白被差异表达,其中113个蛋白在低温位点更丰富,67个蛋白在高温位点更丰富。HS位点较高的温度导致蛋白质丰度降低,这是由于HS过程中蛋白质产生的温度阈值。热休克蛋白在HS植物中更丰富,表明其耐热性增强。较冷位置的植物过度表达与协助光合作用和保护光系统相关的蛋白质,从而导致更好的光合速率和生物量积累。强光和中等高温条件促使叶绿素合成和光保护相关蛋白的调控维持有效功能。参与氧化应激反应的蛋白质在植物的所有部位都有表达,这反映在高浓度的抗氧化剂上。路易波士的耐热性依赖于热休克蛋白和氧化应激反应蛋白的表达,而光合作用相关蛋白则主导低温位点,优化其功能并最终生长。
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引用次数: 0
Polyethylene glycol (PEG) improved macro- and micro-morphological traits of in vitro shoots of Hedyotis biflora (L.) Lam. 聚乙二醇(PEG)对双花蛇舌草(Hedyotis biflora, L.)离体苗宏观和微观形态性状的改善林。
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-08-23 DOI: 10.1007/s11738-025-03827-z
M. Manokari, Mohammad Faisal, Abdulrahman A. Alatar, Rupesh Kumar Singh, Mahipal S. Shekhawat

Key message

The incorporation of optimal concentration of polyethylene glycol with the optimized growth regulators in the nutrient medium promoted shoot growth and improved foliar micro-morpho-anatomical traits of Hedyotis biflora which improved the survival success of the plantlets during ex vitro hardening and field trials.

Polyethylene glycol (PEG) is widely recognized as an effective agent for stimulating osmotic stress in plant tissue cultures. In this study, the micropropagated shoots of Hedyotis biflora (L.) Lam was subjected to varied concentrations of polyethylene glycol (PEG-6000) under in vitro conditions to evaluate the effect of PEG on the morpho-anatomical development of shoots. The cultures were established by culturing nodal shoots on Murashige and Skoog (MS) medium supplemented with 2.0 mg L−1 6-benzylaminopurine (BAP), and the shoots were proliferated on the optimized plant growth regulators (1.0 mg L−1 BAP + 0.5 mg L−1 Kinetin (Kn) + 0.1 mg L−1 Indole-3-acetic acid (IAA). Among the varied concentrations of PEG used in the MS medium, 60 mg L−1 PEG with optimized growth regulators in the medium increased the rate of proliferation and elongation of shoots (14.0 shoots with 7.0 cm length) and leaf area (1.6 cm length × 1.0 cm width) than the control (medium without PEG). The foliar micro-morpho-anatomical elucidations revealed that the control leaves showed a thin cuticle, non-functional stomata, mesophyll with isobilateral tissues, and poorly developed mechanical, dermal, and vascular tissues. The incorporation of 60 mg L−1 PEG (optimal) in the medium increased cuticle thickness, palisade and spongy mesophyll differentiation, functional stomata, dense vascular tissues, and well-developed ground tissues. The PEG-treated shoots showed better rhizogenesis on half-strength MS medium containing 2.0 mg L−1 Indole-3-butyric acid (IBA) (21.0 roots with 4.0 cm average length). These morphometric and structural improvements were sequentially reflected in the increased survival of plantlets (96%) during acclimatization and field transplantation of H. biflora.

在营养培养基中添加最优浓度的聚乙二醇和最优生长调节剂,可促进双花花的茎部生长,改善叶片微观形态解剖性状,提高了双花花试管苗在体外硬化和田间试验中的成活率。聚乙二醇(PEG)被广泛认为是植物组织培养中刺激渗透胁迫的有效剂。本研究以双花蛇舌草(Hedyotis biflora, L.)为研究对象。在体外条件下,研究人员对不同浓度的聚乙二醇(PEG-6000)进行了处理,以评估PEG对嫩枝形态解剖发育的影响。通过在添加2.0 mg L−1 6-氨基嘌呤(BAP)的Murashige和Skoog (MS)培养基上培养节芽,并在优化后的植物生长调节剂(1.0 mg L−1 BAP + 0.5 mg L−1 Kinetin (Kn) + 0.1 mg L−1吲哚-3-乙酸(IAA))上增殖。在MS培养基中不同浓度的PEG中,60 mg L−1的PEG与优化的生长调节剂在培养基中比对照(不含PEG的培养基)增加了芽的增殖率和伸长率(14.0个芽,7.0 cm长)和叶面积(1.6 cm长× 1.0 cm宽)。叶面微形态解剖分析表明,对照叶片角质层薄,气孔无功能,叶肉等侧组织,机械组织、真皮组织和维管组织发育不全。在培养基中掺入60 mg L−1 PEG(最佳)可增加角质层厚度、栅栏状和海绵状叶肉分化、功能性气孔、致密的维管组织和发育良好的地面组织。在含2.0 mg L−1吲哚-3-丁酸(IBA)的半强度MS培养基上,peg处理的枝条生根效果较好(21.0根,平均长4.0 cm)。这些形态和结构上的改善依次反映在双花莲在驯化和大田移植过程中成活率的提高(96%)上。
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引用次数: 0
Phenotypic characterization and comparative non-targeted GC–MS-based metabolomic profiling of two contrasting seedling fonio millet (Digitaria exilis) cultivars: an insight to drought tolerance in small millets 两种不同种子谷子(Digitaria exilis)的表型特征和非靶向gc - ms代谢组学分析:对小谷子耐旱性的了解
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-08-23 DOI: 10.1007/s11738-025-03825-1
David Adedayo Animasaun, Judith Amaka Lawrence

Fonio millet is an orphan crop with great potential for economic and food security. However, drought negatively affects its production and yield in semi-arid and arid regions. This study compared the growth and metabolomic profiles of two contrasting fonio cultivars (NGB02089 and NGB02082) in response to water stress at the seedling stage. The results showed variation in the morph-agronomic characters of the cultivars. There were also significant (p < 0.05) positive correlations in the traits studied, which means that the traits can be improved simultaneously. Chlorophyll content increased progressively with weeks after sowing (WAS) but decreased when seedlings were exposed to water stress. The biomass yield of NGB02082 was higher than that of NGB02089, although the latter grew more vigorously. However, NGB02089 had longer roots. The GC–MS analysis identified 12 significant metabolites that differed in composition between the fonio cultivars, including sugars, fatty acids and siloxanes. The amount of siloxane decreased in NGB02082 with increasing drought duration, but increased in NGB02089. Similarly, cis-13-octadecenoic acid was present in NGB02082 at 4 WAS but absent at 5 WAS, while NGB02089 produced more metabolites. Similarly, phthalimide, triacontane, vaccenic acids, and cholestane were produced in response to drought stress duration. The results of this study showed that NGB02089 and NGB02082 have different metabolomic responses to drought, conferring resistance to NGB02089 while NGB0282 is susceptible to drought. The result of this study suggests that metabolic responses to drought may be useful in developing varieties with better tolerance or adaptation to drought conditions.

谷子是一种孤儿作物,在经济和粮食安全方面具有巨大潜力。但在半干旱和干旱地区,干旱对其生产和产量产生不利影响。本研究比较了两个玉米品种NGB02089和NGB02082幼苗期生长和代谢组学对水分胁迫的响应。结果表明,品种间形态农艺性状存在差异。各性状间也存在显著正相关(p < 0.05),说明各性状可以同步改良。叶绿素含量随播后数周逐渐增加,但在水分胁迫下降低。NGB02082的生物量产量高于NGB02089,但后者生长更为旺盛。然而,NGB02089有更长的根源。GC-MS分析鉴定出12种显著代谢物,包括糖、脂肪酸和硅氧烷。随着干旱持续时间的增加,NGB02082的硅氧烷含量减少,而NGB02089的硅氧烷含量增加。同样,NGB02082在4 was时存在顺式-13-十八烯酸,而在5 was时不存在,而NGB02089产生更多的代谢物。同样,邻苯二胺、三康烷、异丙酸和胆甾在干旱胁迫持续时间下产生。结果表明,NGB02089和NGB02082对干旱具有不同的代谢组学响应,对NGB02089具有抗性,而NGB0282对干旱具有敏感性。本研究结果表明,对干旱的代谢反应可能有助于培育耐旱或适应干旱条件的品种。
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引用次数: 0
Effect of Azospirillum brasilense on P5CS gene expression, physiological traits, and antioxidant activity responses of wheat under water stress condition 水分胁迫条件下巴西氮螺旋菌对小麦P5CS基因表达、生理性状及抗氧化活性的影响
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-08-23 DOI: 10.1007/s11738-025-03826-0
Zohreh Karimi, Mohammad Javad Zarea, Arash Fazeli, Batool Zarei

Further research related to the role of plant-associated bacteria at the molecular level, gene regulation, modulation, and function can lead to hope for enhancing the growth and performance of agricultural plants in harsh environment. Two studies were performed to investigate the function of Azospirillum brasilense in the regulation of proline-responsive gene expression, as well as some important physiological and biochemical traits related to drought resistance in wheat. Wheat seedlings grown from inoculated and uninoculated seeds were grown under no-water-limitation condition for 21 days and then were subjected to two water regimes: 80% of soil water-holding capacity (WHC) and 25% of WHC. The relationship between A. brasilense inoculation and proline accumulation caused by delta-1-pyrroline-5-carboxylate synthase (P5CS) as well as antioxidant system defense was elucidated 2 weeks after water-deficit imposition. Experiment 2 was conducted under greenhouse condition to assess the modulation of photosynthetic traits, cell membrane stability, and relative water content of leaves as well as grain yield in repose to A. brasilense inoculation. Treatments performed in the two experiments were the same, except water-deficit condition in experiment 2 was imposed at anthesis stage. Under water-deficit conditions, inoculation led to lower accumulation rate (82%) of P5CS mRNA as compared to control plants. Under water-deficit condition, inoculated plants showed lower (13.8%) content of proline compared to control plants. Inoculation alleviated the negative effect of water deficiency by increasing the antioxidant enzyme activity as it increased the activity of peroxidase by 11.7%, glutathione peroxidase by 7.3%, catalase by 65% and glutathione reductase by 70% as compared to uninoculated plants. Under water deficiency, plants inoculated with A. brasilense maintained higher photosynthetic parameters such as net carbon dioxide assimilation rate (84%), stomatal conductance (182%), and sub-stomatal carbon dioxide concentration (69%) compared to uninoculated plants. The present study confirmed that expression of the evaluated gene (P5CS) along with the accumulation of proline was a common response of wheat to water deficiency. Both experiments conducted confirmed that. The inoculated plant displayed a lower level of the evaluated gene and proline content, which can be considered for future research and could open a new hope for improving crop resistance to water-deficit stress.

进一步研究植物相关细菌在分子水平上的作用、基因调控和功能,可以为提高农业植物在恶劣环境下的生长和性能带来希望。为研究巴西氮螺旋菌在小麦脯氨酸响应基因表达调控中的作用,以及与小麦抗旱性相关的一些重要生理生化性状。以接种和未接种的小麦种子为材料,在不限制水分条件下生长21 d,然后进行80%土壤持水量和25%土壤持水量的两种水分处理。研究了巴西螺接种与δ -1-吡咯-5-羧酸合酶(P5CS)引起脯氨酸积累及抗氧化系统防御的关系。试验2是在温室条件下进行的,旨在研究接种巴西螺对静止状态下叶片光合特性、细胞膜稳定性、相对含水量和籽粒产量的调节作用。除试验2在开花期施加水分亏缺条件外,2个试验处理相同。在缺水条件下,接种导致P5CS mRNA积累率低于对照植株(82%)。在缺水条件下,接种植株脯氨酸含量低于对照植株(13.8%)。与未接种植株相比,接种可使植株过氧化物酶活性提高11.7%,谷胱甘肽过氧化物酶活性提高7.3%,过氧化氢酶活性提高65%,谷胱甘肽还原酶活性提高70%,从而缓解了水分缺乏的负面影响。在缺水条件下,与未接种的植物相比,接种了巴西木的植物保持了更高的光合参数,如净二氧化碳同化率(84%)、气孔导度(182%)和气孔下二氧化碳浓度(69%)。本研究证实,P5CS基因的表达与脯氨酸的积累是小麦对水分缺乏的共同反应。两项实验都证实了这一点。接种植株的评价基因和脯氨酸含量较低,可作为今后研究的参考,为提高作物抗亏水胁迫能力开辟了新的希望。
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引用次数: 0
Intra-genotypic variation of morpho-anatomical and biochemical traits for lodging resistance in oat (Avena sativa L.) 燕麦(Avena sativa L.)抗倒伏形态解剖及生化性状的基因型内变异
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-08-23 DOI: 10.1007/s11738-025-03829-x
Himani Gupta, Meenakshi Goyal, Rahul Kapoor

Oat (Avena sativa L.) is prone to stem lodging under field conditions that negatively affect productivity. The present study aimed to determine the association between lodging resistance with culm morphological, anatomical and biochemical traits. The experiment was laid out in randomized block design in Rabi season of 2020–21 and 2021–22 using eight recently released oat genotypes (OL-1769-1, RO-11-1, OL-13, OL-1896, JHO-822, OL-15, OL-14 and OL-12) to evaluate the impact of stem lodging on oat genotypes. Dendrogram analysis depicted that Cluster I genotypes (OL-1769-1, RO-11-1, OL-13) proved to be more efficient in overcoming lodging stress as compared to Cluster III (OL-15, OL-14, OL-12) and Cluster II (OL-1896, JHO-822) genotypes. Cluster I had lower lodging scores plus lower percent reduction in thousand grain weight, lignin content, dry matter yield of lodged plants and higher breaking strength (BS), culm lodging resistance index (CLRI) than Cluster III. Increased lodging also had a negative impact on biomass partitioning. The correlation analysis depicted a negative association of CLRI with second internode length (− 0.841**) while significant positive correlation with second internode diameter (0.808*) and BS (0.949**). Water-soluble carbohydrates (WSC) and starch content varied significantly with lodging. Increased vascular bundle area and xylem tissue contributed towards lodging resistance. This study provides the direct estimation of the differential behavior of oat genotypes towards stem lodging and its effect on morpho-anatomical and biochemical characters. Genotype RO-11-1 showed resistant behavior while OL-15 showed susceptible behavior towards lodging. Our findings demonstrate the potential of using commercially viable genotypes to achieve high and stable yield under field conditions and to identify lodging tolerant genotypes to support future breeding programs.

燕麦(Avena sativa L.)在田间条件下容易发生倒伏,对生产力产生不利影响。本研究旨在确定茎秆抗倒伏与茎秆形态、解剖和生化性状之间的关系。本试验采用随机区组设计,选取2020-21和2021-22季8个新发布的燕麦基因型(OL-1769-1、RO-11-1、OL-13、OL-1896、JHO-822、OL-15、OL-14和OL-12),评估茎秆倒伏对燕麦基因型的影响。树状图分析表明,与类群III (OL-15、OL-14、OL-12)和类群II (OL-1896、JHO-822)相比,类群I基因型(OL-1769-1、RO-11-1、OL-13)克服倒伏胁迫的效率更高。与聚类III相比,聚类I的倒伏分数较低,千粒重、木质素含量、干物质产量的降幅较小,折断强度(BS)、茎秆抗倒伏指数(CLRI)较高。倒伏增加对生物量分配也有负面影响。CLRI与第二节间长呈负相关(- 0.841**),与第二节间粗呈显著正相关(0.808* *),与BS呈显著正相关(0.949**)。水溶性碳水化合物(WSC)和淀粉含量随倒伏有显著差异。维管束面积和木质部组织的增加有助于抗倒伏。本研究提供了直接估计燕麦基因型对茎秆倒伏的差异行为及其对形态解剖和生化性状的影响。基因型RO-11-1对倒伏表现出抗性行为,而OL-15表现出易感行为。我们的研究结果表明,利用商业上可行的基因型在田间条件下实现高产和稳定产量的潜力,并确定耐倒伏基因型,以支持未来的育种计划。
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引用次数: 0
Codon usage pattern and genetic diversity in chloroplast genomes of Zanthoxylum species (Sapindales: Rutaceae) 花椒属植物叶绿体基因组密码子使用模式及遗传多样性(有穗科:芸香科)
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-08-06 DOI: 10.1007/s11738-025-03823-3
Changle Li, Songping Wu, Jiangbo Nie, Ling Zhou, Yonghong Liu, Yulin Liu

Codon usage bias (CUB) reflects the unique characteristics of different species and can be used to analyze their evolutionary relationship, enhance the expression efficiency of target genes in heterologous systems, and further offer theoretical insights for research in molecular biology and genetic breeding. The primary objective of this study is to examine the chloroplast gene CUB in 20 Zanthoxylum species, alongside 12 species from other genera within the Rutaceae family, to offer insights for future studies on their chloroplast genomes. In Zanthoxylum plants, the chloroplast gene codons show a preference for terminating with an A/T instead of a G/C base. In the representative chloroplast genome of Zanthoxylum bungeanum, it was discovered that TTT codons are predominantly used for amino acid Phe, while TAT codons are more commonly utilized for amino acid Tyr. Moreover, natural selection strongly influenced the CUB of the chloroplast genomes in Zanthoxylum plants. Based on RSCU values, the optimal codons for these species were identified, with their similarities being highlighted. The phylogenetic tree of Zanthoxylum species was constructed and contrasted with the results of clustering analysis both based on coding sequences, supporting that Zanthoxylum and Toddalia should be considered to be merged. The Subgen. Zanthoxylum represents a substantial branch that has diverged from the Subgen. Fagara and there are significant differences in CUB between these two subgenera. Furthermore, derived from hierarchical clustering analysis utilizing RSCU values, Nicotiana sylvestris was proposed as the compatible heterologous expression receptor for the chloroplast genes of the Zanthoxylum species.

密码子使用偏差(CUB)反映了不同物种的独特特征,可用于分析物种间的进化关系,提高靶基因在异源系统中的表达效率,进一步为分子生物学和遗传育种研究提供理论依据。本研究的主要目的是检测20种花椒属植物的叶绿体基因CUB,以及芸香科其他12种植物的叶绿体基因组,为进一步研究花椒属植物的叶绿体基因组提供参考。在花椒属植物中,叶绿体基因密码子显示出以a /T而不是G/C碱基终止的偏好。在花椒(Zanthoxylum bungeanum)的代表性叶绿体基因组中,发现TTT密码子主要用于氨基酸Phe,而TAT密码子更多地用于氨基酸Tyr。此外,自然选择对花椒叶绿体基因组的CUB有很大影响。基于RSCU值,确定了这些物种的最佳密码子,并突出了它们的相似性。构建了花椒属植物的系统发育树,并与基于编码序列的聚类分析结果进行了对比,支持花椒属植物与幼童属植物合并的观点。Subgen。花椒门代表了从亚属中分离出来的一个重要分支。Fagara和CUB在这两个亚属之间存在显著差异。此外,利用RSCU值进行分层聚类分析,提出了烟叶(Nicotiana sylvestris)作为花椒叶绿体基因的相容异源表达受体。
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引用次数: 0
Genome-wide identification of the MYB transcription factor family in kiwifruit and analysis of its expression pattern in response to salt stress 猕猴桃MYB转录因子家族的全基因组鉴定及其对盐胁迫的表达模式分析
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-08-06 DOI: 10.1007/s11738-025-03819-z
Chaoying Chen, Wenjuan Zhao, Xulin Li, Ke Wen, Yinqiang Zi, Ke Zhao, Daming Chen, Hanyao Zhang, Xiaozhen Liu

As the king of vitamin C, kiwifruit has high nutritional and economic value. However, with the expansion of its planting area and the application of a large amount of farm manure represented by large livestock manure, kiwifruit is at increasing risk of salt stress, so it is urgent to select salt-tolerant strains of kiwifruit. MYB transcription factors (TFs) play a vital role in responding to abiotic stress and regulating the synthesis of secondary metabolites. There are relatively few reports on the specific gene functions of MYB TFs. In this study, based on the kiwifruit genome database and transcriptome sequencing data, we used bioinformatics to analyze the structure, evolution, and expression patterns of kiwifruit MYB TFs. The results showed that 226 AcMYB TFs were identified, and the phylogenetic analysis classified them into 32 subfamilies. Analysis of the gene structure and conserved motifs revealed that the exon and intron structures of AcMYB in the same subfamily are relatively identical, with only minor differences. In addition, we predicted cis-acting elements associated with hormones, light responses, etc., at the 2000 bp upstream position of the promoter of the AcMYB TFs. Expression profiling based on transcriptome data showed a total of 24 differentially significant genes, of which 11 genes were upregulated, and 13 genes were downregulated. AcMYB100, AcMYB186, AcMYB81, and so on upregulated genes by positively regulating salt stress to minimize the effects caused to the plants, AcMYB145, AcMYB88, AcMYB1, and so on downregulated genes reduced the salt stress effects on plants by negatively regulating salt stress. It suggests that these MYB TFs can modify the effects of salt on kiwifruit. We also identified the signaling pathway of stress regulating MYB TFs in response to salt stress in kiwifruit plants. These results provide a basis for understanding the biological functions and characteristics of the MYB TF family and lay a foundation for further research on salt tolerance breeding in kiwifruit.

猕猴桃作为维生素C之王,具有很高的营养价值和经济价值。然而,随着猕猴桃种植面积的扩大和以大量畜禽粪便为代表的大量农畜粪便的施用,猕猴桃遭受盐胁迫的风险越来越大,因此选择耐盐猕猴桃品系迫在眉睫。MYB转录因子(TFs)在应对非生物胁迫和调节次生代谢产物合成中起着至关重要的作用。关于MYB tf的特定基因功能的报道相对较少。本研究基于猕猴桃基因组数据库和转录组测序数据,利用生物信息学方法分析了猕猴桃MYB tf的结构、进化和表达模式。结果发现226个AcMYB TFs,系统发育分析将其划分为32个亚家族。对基因结构和保守基序的分析表明,同一亚家族AcMYB的外显子和内含子结构相对相同,只有微小的差异。此外,我们在AcMYB TFs启动子上游2000 bp的位置预测了与激素、光响应等相关的顺式作用元件。基于转录组数据的表达谱分析显示,共有24个差异显著基因,其中11个基因表达上调,13个基因表达下调。AcMYB100、AcMYB186、AcMYB81等上调基因通过正向调控盐胁迫来降低对植物的影响,AcMYB145、AcMYB88、AcMYB1等下调基因通过负向调控盐胁迫来降低盐胁迫对植物的影响。这表明这些MYB TFs可以改变盐对猕猴桃的影响。我们还发现了胁迫调节MYB TFs在猕猴桃植物中响应盐胁迫的信号通路。这些结果为了解MYB TF家族的生物学功能和特性提供了基础,并为进一步研究猕猴桃耐盐育种奠定了基础。
{"title":"Genome-wide identification of the MYB transcription factor family in kiwifruit and analysis of its expression pattern in response to salt stress","authors":"Chaoying Chen,&nbsp;Wenjuan Zhao,&nbsp;Xulin Li,&nbsp;Ke Wen,&nbsp;Yinqiang Zi,&nbsp;Ke Zhao,&nbsp;Daming Chen,&nbsp;Hanyao Zhang,&nbsp;Xiaozhen Liu","doi":"10.1007/s11738-025-03819-z","DOIUrl":"10.1007/s11738-025-03819-z","url":null,"abstract":"<div><p>As the king of vitamin C, kiwifruit has high nutritional and economic value. However, with the expansion of its planting area and the application of a large amount of farm manure represented by large livestock manure, kiwifruit is at increasing risk of salt stress, so it is urgent to select salt-tolerant strains of kiwifruit. MYB transcription factors (TFs) play a vital role in responding to abiotic stress and regulating the synthesis of secondary metabolites. There are relatively few reports on the specific gene functions of MYB TFs. In this study, based on the kiwifruit genome database and transcriptome sequencing data, we used bioinformatics to analyze the structure, evolution, and expression patterns of kiwifruit MYB TFs. The results showed that 226 AcMYB TFs were identified, and the phylogenetic analysis classified them into 32 subfamilies. Analysis of the gene structure and conserved motifs revealed that the exon and intron structures of <i>AcMYB</i> in the same subfamily are relatively identical, with only minor differences. In addition, we predicted cis-acting elements associated with hormones, light responses, etc., at the 2000 bp upstream position of the promoter of the AcMYB TFs. Expression profiling based on transcriptome data showed a total of 24 differentially significant genes, of which 11 genes were upregulated, and 13 genes were downregulated. <i>AcMYB100</i>, <i>AcMYB186</i>, <i>AcMYB81</i>, and so on upregulated genes by positively regulating salt stress to minimize the effects caused to the plants, <i>AcMYB145</i>, <i>AcMYB88</i>, <i>AcMYB1</i>, and so on downregulated genes reduced the salt stress effects on plants by negatively regulating salt stress. It suggests that these MYB TFs can modify the effects of salt on kiwifruit. We also identified the signaling pathway of stress regulating MYB TFs in response to salt stress in kiwifruit plants. These results provide a basis for understanding the biological functions and characteristics of the MYB TF family and lay a foundation for further research on salt tolerance breeding in kiwifruit.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"47 7","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-08-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145162475","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of heat tolerance of rice genotypes at the seedling stage by growth performance and physiological changes 利用生长性能和生理变化评价水稻基因型苗期耐热性
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-08-06 DOI: 10.1007/s11738-025-03824-2
Nantawan Kanawapee, Wuttichai Gunnula, Prakit Somta, Piyaporn Phansak

The basis for heat tolerance of rice results from complex physiological mechanisms that vary among different varieties. To identify the relationships between growth performance and physiological characteristics of rice under heat stress, 29 rice genotypes at the seedling stage were evaluated for their heat (45 °C) tolerance for 5 days. Increasing proline content was most strongly significantly correlated with malondialdehyde (MDA) content. Proline, MDA and total chlorophyll contents were included in a multivariate analysis to classify the rice genotypes into four heat tolerance groups: tolerant (T), moderately tolerant (MT), sensitive (S), and highly sensitive (HS). The means of the proline content, MDA content, visual symptom score, and upper epidermal layer thickness (UET) were significantly different among the four tolerance groups and tended to increase and then decrease with decreasing levels of tolerance. Together, these findings indicated that these parameters were the most reliable indices for identifying heat tolerance. In addition to the commonly used visual symptom score and growth performance, proline content and UET could be two other useful and less expensive physiological and anatomical index measurements to differentiate heat-tolerant rice from heat-sensitive rice. The results of this study also showed that several local Thai cultivars have high heat tolerance and could be used for obtaining heat tolerance alleles for breeding programs.

水稻耐热性的基础是不同品种间复杂的生理机制。为了确定热胁迫下水稻生长性能与生理特性之间的关系,对29个水稻基因型苗期5 d的耐热性(45°C)进行了评价。脯氨酸含量的增加与丙二醛(MDA)含量的增加关系最为显著。利用脯氨酸、丙二醛和总叶绿素含量进行多变量分析,将水稻基因型分为耐高温(T)、中等耐高温(MT)、敏感耐高温(S)和高敏感耐高温(HS) 4个组。脯氨酸含量、丙二醛含量、视觉症状评分和上表皮层厚度(UET)均值在4个耐药组间差异显著,且随耐药水平的降低呈先升高后降低的趋势。综上所述,这些参数是鉴定耐热性最可靠的指标。除了常用的视觉症状评分和生长性能外,脯氨酸含量和UET可以作为区分耐热水稻和热敏水稻的另外两个有用且便宜的生理和解剖指标。本研究结果还表明,几个泰国地方品种具有较高的耐热性,可以用于育种计划的耐热等位基因的获取。
{"title":"Evaluation of heat tolerance of rice genotypes at the seedling stage by growth performance and physiological changes","authors":"Nantawan Kanawapee,&nbsp;Wuttichai Gunnula,&nbsp;Prakit Somta,&nbsp;Piyaporn Phansak","doi":"10.1007/s11738-025-03824-2","DOIUrl":"10.1007/s11738-025-03824-2","url":null,"abstract":"<div><p>The basis for heat tolerance of rice results from complex physiological mechanisms that vary among different varieties. To identify the relationships between growth performance and physiological characteristics of rice under heat stress, 29 rice genotypes at the seedling stage were evaluated for their heat (45 °C) tolerance for 5 days. Increasing proline content was most strongly significantly correlated with malondialdehyde (MDA) content. Proline, MDA and total chlorophyll contents were included in a multivariate analysis to classify the rice genotypes into four heat tolerance groups: tolerant (T), moderately tolerant (MT), sensitive (S), and highly sensitive (HS). The means of the proline content, MDA content, visual symptom score, and upper epidermal layer thickness (UET) were significantly different among the four tolerance groups and tended to increase and then decrease with decreasing levels of tolerance. Together, these findings indicated that these parameters were the most reliable indices for identifying heat tolerance. In addition to the commonly used visual symptom score and growth performance, proline content and UET could be two other useful and less expensive physiological and anatomical index measurements to differentiate heat-tolerant rice from heat-sensitive rice. The results of this study also showed that several local Thai cultivars have high heat tolerance and could be used for obtaining heat tolerance alleles for breeding programs.</p></div>","PeriodicalId":6973,"journal":{"name":"Acta Physiologiae Plantarum","volume":"47 7","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-08-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145162473","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structural and functional traits driving Chloris flagellifera proliferation in arid saline environments 干旱盐碱化环境下鞭毛草藻增殖的结构和功能特征
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-07-07 DOI: 10.1007/s11738-025-03816-2
Ummar Iqbal, Mansoor Hameed, Farooq Ahmad, Muhammad Sajid Aqeel Ahmad, Khawaja Shafique Ahmad, Ansar Mehmood, Nargis Naz, Muhammad Akram

Chloris flagellifera (Nees) P. M. Peterson is a species thriving in salt-affected regions across Punjab, Pakistan. To investigate intraspecific variations, six distinct populations were selected from diverse saline environments: (1) Pakka Anna and Sahian Wala from the least saline regions, (2) Jhalar and Kalar Kahar Lake from moderately saline areas, and (3) Uchali Lake and Khabbeki Lake from hyper-saline zones. These populations, originating from a range of salinity gradients, provide a unique opportunity to study the adaptive mechanisms of C. flagellifera to varying levels of soil salinity. Stomata from highly saline areas were small and narrowly elliptical, while they were larger and rhomboidal in moderately saline areas and circular in least saline areas. Populations from hyper-saline environments (Uchali Lake, Khabbeki Lake) displayed remarkable trait variation, including thicker epidermal layers, larger vascular bundles, and efficient osmotic adjustments, indicating their superior salt tolerance. Populations from least saline areas (Sahian Wala, Pakka Anna) showed structural features like thicker leaves and larger epidermal cells that enhance water retention. Moderately saline populations (Kallar Kahar Lake, Jhallar Lake) exhibited intermediate traits, balancing salt tolerance with efficient resource allocation. These anatomical and physiological responses suggest that C. flagellifera exhibits high adaptability to varying salinity stress. The study highlights the potential of hyper-saline populations for use in the reclamation of salt-affected soils, offering a sustainable approach to land restoration.

在巴基斯坦旁遮普省受盐影响的地区,鞭毛绿尾草(Nees) P. M. Peterson是一种欣欣向荣的物种。为了研究种内变化,从不同的盐渍化环境中选择了6个不同的种群:(1)来自最低盐渍化地区的Pakka Anna和Sahian Wala,(2)来自中等盐渍化地区的Jhalar和Kalar Kahar湖,(3)来自高盐渍化地区的Uchali湖和Khabbeki湖。这些种群起源于不同的盐度梯度,为研究鞭毛草对不同土壤盐度的适应机制提供了独特的机会。高盐区气孔小且呈窄椭圆形,中盐区气孔大且呈菱形,低盐区气孔呈圆形。Uchali湖、Khabbeki湖等高盐环境种群表现出较厚的表皮层、较大的维管束和有效的渗透调节等特征,表明其耐盐能力较强。来自最不含盐地区(Sahian Wala, Pakka Anna)的种群表现出更厚的叶子和更大的表皮细胞等结构特征,这些结构特征增强了水分潴留。中等盐碱种群(Kallar Kahar湖、Jhallar湖)表现出耐盐性与资源高效配置之间的平衡。这些解剖和生理反应表明,鞭毛草对不同盐度胁迫具有较高的适应性。该研究强调了利用高盐人口开垦受盐影响的土壤的潜力,为土地恢复提供了一种可持续的方法。
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引用次数: 0
Blue light is a key factor in regulating stomatal movement, transpiration rate and ABA metabolism under varying vapour pressure 蓝光是调节不同蒸汽压下气孔运动、蒸腾速率和ABA代谢的关键因子
IF 2.2 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-06-27 DOI: 10.1007/s11738-025-03818-0
Sheona Noemi Innes, Sara Brunborg Jakobsen, Rikke Bryn Røsåsen, Haider Ali, Knut Asbjørn Solhaug, Jorunn Elisabeth Olsen, Sissel Torre

Vapour pressure deficit (VPD) and blue light (BL) are import signals for stomatal regulation and highly relevant during cultivation of economically important crops such as cucumber in controlled environments. However, the information about combined effects of VPD and BL and the regulation of abscisic acid (ABA) in this respect, is limited and seems to vary between species. This study investigated how moderate (1.12 kPa) or low (0.28 kPa) VPD combined with 5% or 30% BL affect the foliar ABA metabolism, transpiration rate, nutrient uptake, and growth in well-watered cucumber plants (Cucumis sativus ‘Quatro’). Additional BL, regardless of VPD, resulted in a decrease in the nighttime ABA content (52%), as well as increased adaxial stomatal density (8–19%), transpiration rate during the day (40–50%) and foliar nitrogen content (30%). ABA regulation was unaffected by VPD, but the BL levels during the day influenced the ABA inactivation at night; both the transpiration rate and the ABA-glucose ester (ABA-GE) content then increased in 30% BL compared to 5% BL. An increase in starch degradation due to additional BL led to higher content of the transport carbohydrate raffinose in source leaves and increased the fruit appearance rate (fruit day−1) in low VPD but reduced it in moderate VPD. This study provides novel insight into the regulation of ABA under different VPDs and BL proportions in cucumber, and reveals that under well-watered conditions, BL is a stronger determinant of stomatal aperture regulation than ABA. Also, a combination of high VPD and high BL can act as a weak stressor and affect cucumber growth and yield.

蒸汽压亏缺(VPD)和蓝光(BL)是气孔调节的重要信号,与黄瓜等重要经济作物在受控环境下的栽培密切相关。然而,关于VPD和BL的联合作用以及脱落酸(ABA)在这方面的调控的信息是有限的,并且似乎在物种之间有所不同。本研究研究了适度(1.12 kPa)或低(0.28 kPa) VPD加5%或30% BL对黄瓜叶片ABA代谢、蒸腾速率、养分吸收和生长的影响。在不考虑VPD的情况下,增加BL可导致夜间ABA含量降低(52%),近轴气孔密度增加(8-19%),白天蒸腾速率增加(40-50%),叶面氮含量增加(30%)。ABA的调节不受VPD的影响,但白天的BL水平影响了夜间ABA的失活;与5% BL相比,30% BL的蒸腾速率和aba -葡萄糖酯(ABA-GE)含量均有所增加。由于添加BL,淀粉降解增加,导致源叶片中运输碳水化合物棉子糖含量增加,低VPD条件下增加了果实出现率(果实日- 1),而中等VPD条件下降低了果实出现率。本研究对黄瓜不同vpd和BL比例下ABA的调控提供了新的认识,揭示了在水分充足的条件下,BL比ABA对气孔孔径的调控更强。另外,高VPD和高BL的组合可以作为弱胁迫源,影响黄瓜的生长和产量。
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引用次数: 0
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Acta Physiologiae Plantarum
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