We describe a 13-year-old male diagnosed with two rare neurogenetic disorders, transducin (beta)-like X-linked receptor 1 (TBL1XR1)-related disorder and Bainbridge–Ropers syndrome (BRPS), caused by pathogenic variants in additional sex combs-like 3 (ASXL3). Each variant was inherited from an affected parent, although the parents each exhibited much milder phenotypes than the child. TBL1XR1, a widely expressed transcriptional regulator,1 has been implicated in a range of neurodevelopmental disorders.2 TBL1XR1-related disorder includes both Pierpont syndrome, a disorder associated with characteristic dysmorphism, including short stature, along with developmental delay, epilepsy, and feeding difficulties,3, 4 and non-Pierpont presentations, including autism spectrum disorder (ASD), intellectual disability (ID), attention deficit hyperactivity disorder (ADHD), epilepsy, and schizophrenia.2 Heterozygous pathogenic variants in the ASXL3 transcriptional regulator cause BRPS, characterized by developmental delay with significant language impairment, ID, ASD, feeding difficulties, epilepsy, and dysmorphism.5 Nonspecific clinical features that overlap with other genetic syndromes make TBL1XR1-related disorder and BRPS difficult to recognize and diagnose. Further, both disorders typically arise from de novo variants, with few cases of either disorder previously reported to be inherited.
The patient is a 13-year-old Hispanic male found to have a maternally inherited pathogenic ASXL3 variant [c.4678C > T, p.(R1560*) in exon 12] and paternally inherited pathogenic TBL1XR1 variant [c.1291C > T, p.(R431*) in exon 14]. Genetic testing was done by GeneDx using their autism/ID expanded panel with DNA analyzed via next-generation sequencing with copy-number variant calling. Both variants were classified as pathogenic by GeneDx using the 2015 guidelines published by the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.6
His mother has mild ID, ASD traits, ADHD, febrile seizures, and anxiety. His father has been diagnosed with Asperger syndrome, bipolar disorder, fetal alcohol syndrome, ID, ADHD, substance use disorder, anxiety, depression, and psychosis. There are no siblings. The patient was born full term at 6 pounds by Cesarean section due to maternal fever and an amniotic fluid leak. He spent one night in the neonatal intensive care unit for presumed infection. Perinatal difficulties included latching issues, tongue tie, extension contracture of the left hand that corrected over time, reflux, and poor/irritable sleep.
His initial development was normal; however, regression began after a fever at 18 months. Nearly all verbal and communication skills were lost. He made repetitive sounds, stopped pl