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Artificial intelligence in medicine. Conference on Artificial Intelligence in Medicine (2005- )最新文献

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Predicting Kidney Transplant Survival using Multiple Feature Representations for HLAs 利用hla的多特征表示预测肾移植生存
Mohammadreza Nemati, Haonan Zhang, Michael Sloma, D. Bekbolsynov, Hong Wang, S. Stepkowski, Kevin S. Xu
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引用次数: 6
Diagnostic Prediction with Sequence-of-sets Representation Learning for Clinical Events. 临床事件的集合序列表示学习诊断预测。
Pub Date : 2020-08-01 Epub Date: 2020-09-26 DOI: 10.1007/978-3-030-59137-3_31
Tianran Zhang, Muhao Chen, Alex A T Bui

Electronic health records (EHRs) contain both ordered and unordered chronologies of clinical events that occur during a patient encounter. However, during data preprocessing steps, many predictive models impose a predefined order on unordered clinical events sets (e.g., alphabetical, natural order from the chart, etc.), which is potentially incompatible with the temporal nature of the sequence and predictive task. To address this issue, we propose DPSS, which seeks to capture each patient's clinical event records as sequences of event sets. For each clinical event set, we assume that the predictive model should be invariant to the order of concurrent events and thus employ a novel permutation sampling mechanism. This paper evaluates the use of this permuted sampling method given different data-driven models for predicting a heart failure (HF) diagnosis in subsequent patient visits. Experimental results using the MIMIC-III dataset show that the permutation sampling mechanism offers improved discriminative power based on the area under the receiver operating curve (AUROC) and precision-recall curve (pr-AUC) metrics as HF diagnosis prediction becomes more robust to different data ordering schemes.

电子健康记录(EHRs)包含患者就诊期间发生的临床事件的有序和无序年表。然而,在数据预处理过程中,许多预测模型对无序的临床事件集施加了预定义的顺序(例如,字母顺序,图表的自然顺序等),这可能与序列和预测任务的时间性质不兼容。为了解决这个问题,我们提出了DPSS,它试图将每个患者的临床事件记录捕获为事件集序列。对于每个临床事件集,我们假设预测模型对并发事件的顺序是不变的,因此采用了一种新的排列抽样机制。本文评估使用这种排列抽样方法给出不同的数据驱动模型预测心衰(HF)诊断在随后的病人就诊。使用MIMIC-III数据集的实验结果表明,排列抽样机制可以提高基于接收者工作曲线下面积(AUROC)和精确召回率曲线(pr-AUC)指标的判别能力,使HF诊断预测对不同数据排序方案具有更强的鲁棒性。
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引用次数: 0
Diagnostic Prediction with Sequence-of-setsRepresentation Learning for Clinical Events 用集合序列表示学习进行临床事件诊断预测
Tianran Zhang, Muhao Chen, A. Bui
Electronic health records (EHRs) contain both ordered and unordered chronologies of clinical events that occur during a patient encounter. However, during data preprocessing steps, many predictive models impose a predefined order on unordered clinical events sets (e.g., alphabetical, natural order from the chart, etc.), which is potentially incompatible with the temporal nature of the sequence and predictive task. To address this issue, we proposeDPSS, which seeks to capture each patient's clinical event records as sequences of event sets. Foreach clinical event set, we assume that the predictive model should be invariant to the order of concurrent events and thus employ a novel permutation sampling mechanism. This paper evaluates the use of this permuted sampling method given different data-driven models for predicting a heart failure (HF) diagnosis in sub-sequent patient visits. Experimental results using the MIMIC-III dataset show that the permutation sampling mechanism offers improved discriminative power based on the area under the receiver operating curve (AUROC) and precision-recall curve (pr-AUC) metrics as HF diagnosis prediction becomes more robust to different data ordering schemes.
电子健康记录(EHRs)包含患者就诊期间发生的临床事件的有序和无序年表。然而,在数据预处理过程中,许多预测模型对无序的临床事件集施加了预定义的顺序(例如,字母顺序,图表的自然顺序等),这可能与序列和预测任务的时间性质不兼容。为了解决这个问题,我们提出了dpss,它试图将每个患者的临床事件记录捕获为事件集序列。对于每个临床事件集,我们假设预测模型对并发事件的顺序是不变的,因此采用了一种新的排列抽样机制。本文评估使用这种排列抽样方法给出不同的数据驱动模型预测心衰(HF)诊断在随后的病人就诊。使用MIMIC-III数据集的实验结果表明,排列抽样机制可以提高基于接收者工作曲线下面积(AUROC)和精确召回率曲线(pr-AUC)指标的判别能力,使HF诊断预测对不同数据排序方案具有更强的鲁棒性。
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引用次数: 22
Recent Context-Aware LSTM for Clinical Event Time-Series Prediction 近期用于临床事件时间序列预测的上下文感知LSTM
Jeong Min Lee, M. Hauskrecht
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引用次数: 13
Predicting patient's diagnoses and diagnostic categories from clinical-events in EHR data. 根据EHR数据中的临床事件预测患者的诊断和诊断类别。
Pub Date : 2019-06-01 Epub Date: 2019-05-30 DOI: 10.1007/978-3-030-21642-9_17
Seyedsalim Malakouti, Milos Hauskrecht

In this paper we develop and study machine learning based models based on latent semantic indexing capable of automatically assigning diagnoses and diagnostic categories to patients based on structured clinical data in their Electronic Health record (EHR). These models can be either used for automatic coding of patient's diagnoses from structured EHR data at the time of discharge, or for supporting dynamic diagnosis and summarization of the patient condition. We study the performance of our diagnostic models on MIMIC-III EHR data.

在本文中,我们开发和研究了基于潜在语义索引的机器学习模型,该模型能够根据患者电子健康记录(EHR)中的结构化临床数据自动将诊断和诊断类别分配给患者。这些模型可以用于出院时根据结构化EHR数据对患者诊断进行自动编码,也可以用于支持患者病情的动态诊断和总结。我们研究了我们的诊断模型在MIMIC-III EHR数据上的性能。
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引用次数: 16
Mining Compact Predictive Pattern Sets Using Classification Model 利用分类模型挖掘紧凑预测模式集
M. Mantovani, Combi Carlo, M. Hauskrecht
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引用次数: 4
Change-Point Detection Method for Clinical Decision Support System Rule Monitoring. 临床决策支持系统规则监测的变点检测方法。
Pub Date : 2017-06-01 Epub Date: 2017-05-30 DOI: 10.1007/978-3-319-59758-4_14
Siqi Liu, Adam Wright, Milos Hauskrecht

A clinical decision support system (CDSS) and its components can malfunction due to various reasons. Monitoring the system and detecting its malfunctions can help one to avoid any potential mistakes and associated costs. In this paper, we investigate the problem of detecting changes in the CDSS operation, in particular its monitoring and alerting subsystem, by monitoring its rule firing counts. The detection should be performed online, that is whenever a new datum arrives, we want to have a score indicating how likely there is a change in the system. We develop a new method based on Seasonal-Trend decomposition and likelihood ratio statistics to detect the changes. Experiments on real and simulated data show that our method has a lower delay in detection compared with existing change-point detection methods.

临床决策支持系统(CDSS)及其组成部分可能由于各种原因而发生故障。监控系统并检测其故障可以帮助人们避免任何潜在的错误和相关的成本。在本文中,我们研究了通过监视其规则触发计数来检测CDSS操作中的变化的问题,特别是其监视和警报子系统。检测应该在线执行,也就是说,每当有新的数据到达时,我们希望有一个分数,表明系统中发生变化的可能性有多大。我们提出了一种基于季节趋势分解和似然比统计的新方法来检测变化。在真实和仿真数据上的实验表明,与现有的变点检测方法相比,该方法具有较低的检测延迟。
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引用次数: 20
Identifying Parkinson's Patients: A Functional Gradient Boosting Approach. 识别帕金森患者:一种功能梯度增强方法。
Pub Date : 2017-06-01 Epub Date: 2017-05-30 DOI: 10.1007/978-3-319-59758-4_39
Devendra Singh Dhami, Ameet Soni, David Page, Sriraam Natarajan

Parkinson's, a progressive neural disorder, is difficult to identify due to the hidden nature of the symptoms associated. We present a machine learning approach that uses a definite set of features obtained from the Parkinsons Progression Markers Initiative(PPMI) study as input and classifies them into one of two classes: PD(Parkinson's disease) and HC(Healthy Control). As far as we know this is the first work in applying machine learning algorithms for classifying patients with Parkinson's disease with the involvement of domain expert during the feature selection process. We evaluate our approach on 1194 patients acquired from Parkinsons Progression Markers Initiative and show that it achieves a state-of-the-art performance with minimal feature engineering.

帕金森氏症是一种进行性神经疾病,由于相关症状的隐蔽性,很难识别。我们提出了一种机器学习方法,该方法使用从帕金森进展标志物倡议(PPMI)研究中获得的一组明确的特征作为输入,并将它们分为两类:PD(帕金森病)和HC(健康控制)。据我们所知,这是第一次在特征选择过程中使用领域专家参与的机器学习算法对帕金森病患者进行分类。我们在1194例帕金森进展标志物患者中评估了我们的方法,并表明它以最小的特征工程实现了最先进的性能。
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引用次数: 11
Extracting Adverse Drug Events from Text using Human Advice. 利用人类建议从文本中提取药物不良事件。
Phillip Odom, Vishal Bangera, Tushar Khot, David Page, Sriraam Natarajan

Adverse drug events (ADEs) are a major concern and point of emphasis for the medical profession, government, and society in general. When methods extract ADEs from observational data, there is a necessity to evaluate these methods. More precisely, it is important to know what is already known in the literature. Consequently, we employ a novel relation extraction technique based on a recently developed probabilistic logic learning algorithm that exploits human advice. We demonstrate on a standard adverse drug events data base that the proposed approach can successfully extract existing adverse drug events from limited amount of training data and compares favorably with state-of-the-art probabilistic logic learning methods.

药物不良事件(ADEs)是医学界、政府和社会普遍关注的主要问题和重点。当方法从观测资料中提取ade时,有必要对这些方法进行评估。更准确地说,重要的是要知道什么是已知的文献。因此,我们采用了一种基于最近开发的利用人类建议的概率逻辑学习算法的新型关系提取技术。我们在一个标准的药物不良事件数据库上证明,所提出的方法可以成功地从有限数量的训练数据中提取现有的药物不良事件,并且与最先进的概率逻辑学习方法相比具有优势。
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引用次数: 19
期刊
Artificial intelligence in medicine. Conference on Artificial Intelligence in Medicine (2005- )
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