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Ultra-lightweight uncertainty-aware ensemble for large-scale multi-class medical MRI diagnosis. 用于大规模多级医学MRI诊断的超轻量不确定性感知集成。
IF 2.3 Pub Date : 2025-12-19 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1723272
Sowad Rahman, Fahmid Al Farid, Mahe Zabin, Jia Uddin, Hezerul Abdul Karim

This paper introduces an Ultra-Lightweight Uncertainty-Aware Ensemble (UALE) model for large-scale multi-class medical MRI diagnosis, evaluated on the 2024 Benchmark Diagnostic MRI and Medical Imaging Dataset containing 40 classes and 33,616 images. The model integrates five specialized micro-expert networks, each designed to capture distinct MRI features, and combines them using a confidence-weighted ensemble mechanism enhanced with variance-based uncertainty quantification for robust, reliable predictions. With only 0.05M parameters and 0.18 GFLOPs, UALE achieves high efficiency and competitive performance among ultra-lightweight models with an accuracy of 69.1% and an F1 score of 68.3%. Besides lightweight models, the paper offers an extensive analysis and performance comparison with fifteen state-of-the-art models, discusses various datasets, elaborates on uncertainty estimates pertaining to the clinical trustworthiness of the models and possible clinical deployment, and highlights trade-offs and avenues for future work in economically constrained settings. The extreme compactness and reliability of the UALE affords it unique utility in scalable medical diagnostics suitable for low-resource clinical settings and portable imaging devices, such as rural hospitals.

本文介绍了一种用于大规模多类别医学MRI诊断的超轻量级不确定性感知集成(UALE)模型,并在包含40类和33,616张图像的2024基准诊断MRI和医学成像数据集上进行了评估。该模型集成了五个专门的微专家网络,每个网络都设计用于捕获不同的MRI特征,并使用基于方差的不确定性量化增强的置信度加权集成机制将它们结合起来,以实现稳健、可靠的预测。UALE仅使用0.05M参数和0.18 GFLOPs,以69.1%的准确率和68.3%的F1分数在超轻量车型中实现了高效率和竞争力。除了轻量级模型,本文还对15个最先进的模型进行了广泛的分析和性能比较,讨论了各种数据集,详细阐述了与模型的临床可信度和可能的临床部署有关的不确定性估计,并强调了在经济受限环境下未来工作的权衡和途径。UALE的极端紧凑性和可靠性使其在可扩展的医疗诊断中具有独特的实用性,适用于资源匮乏的临床环境和便携式成像设备,如农村医院。
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引用次数: 0
Histogram analysis of diffusion-weighted imaging with a fractional order calculus model in breast cancer: diagnostic performance and associations with prognostic factors. 乳腺癌分数阶微积分模型弥散加权成像的直方图分析:诊断性能及其与预后因素的关系。
IF 2.3 Pub Date : 2025-12-18 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1664740
Bo Hu, Caili Tang, Qilan Hu, Xu Yan, Tao Ai

Objective: This study aims to evaluate the diagnostic performance of diffusion-weighted imaging (DWI) with a fractional order calculus (FROC) model for differentiating breast lesions and to explore the associations between FROC/apparent diffusion coefficient (ADC)-derived diffusion metrics and prognostic biomarkers and molecular subtypes in breast cancer.

Methods: This retrospective study included 147 patients with 159 histopathology-confirmed lesions who underwent multi-b DWI using simultaneous multi-slice (SMS) readout-segmented echo-planar imaging (rs-EPI) at 3.0 T. Whole-lesion histograms were computed for mono-exponential ADC and FROC parameters (D, β, μ). The Mann-Whitney U test was used to compare the histogram metrics of each diffusion parameter between the benign and malignant groups and between groups with different prognostic biomarkers and molecular subtypes. The Kruskal-Wallis test was used to compare the histogram metrics of each DWI-derived parameter among the different molecular subtypes. The Spearman rank correlation analysis was employed to characterize correlations between diffusion parameters and prognostic biomarkers. The diagnostic performance of each DWI-derived parameter in differentiating breast lesions was assessed using receiver operating characteristic (ROC) analysis.

Results: Interobserver reproducibility was excellent (intra-class correlation coefficient 0.827-0.928). Central tendency histogram metrics (10th, 90th percentiles, mean, median) of ADC and FROC parameters were higher in benign than malignant lesions, whereas skewness (all models) and entropy/kurtosis (ADC, D, μ) were lower in benign lesions (all p < 0.05, except β-skewness). The histogram metrics of ADC-median, DFROC-mean, and DFROC-median showed similar diagnostic performance. The values of ADC-mean, DFROC-10%, DFROC-mean, DFROC-median, βFROC-10%, βFROC-mean, and βFROC-median were significantly lower in the estrogen receptor (ER)-positive group compared with those in the ER-negative group. The tumors with progesterone receptor (PR)-negative status showed significantly higher βFROC-10%, βFROC-mean, and βFROC-median values than those of tumors with PR-positive status. The values of DFROC-skewness, βFROC-10%, and βFROC-mean exhibited significant differences in differentiating the triple-negative and luminal subtypes.

Conclusions: FROC-based histogram analysis yields diagnostic performance comparable to ADC for benign vs. malignant classification, while providing richer associations with ER/PR status, proliferation, and nodal involvement, reflecting microstructural heterogeneity not captured by mono-exponential diffusion.

目的:本研究旨在评估分数阶微积分(FROC)模型的弥散加权成像(DWI)对乳腺病变的诊断价值,并探讨FROC/表观弥散系数(ADC)衍生的弥散指标与乳腺癌预后生物标志物和分子亚型之间的关系。方法:本回顾性研究纳入147例经组织病理学证实的159个病变,采用3.0 T同步多层(SMS)读数分段回声平面成像(rs-EPI)进行多重DWI检查。计算单指数ADC和FROC参数(D, β, μ)的全病变直方图。使用Mann-Whitney U检验比较良性组和恶性组之间以及具有不同预后生物标志物和分子亚型的组之间每个扩散参数的直方图度量。采用Kruskal-Wallis检验比较不同分子亚型dwi衍生参数的直方图度量。采用Spearman秩相关分析来表征扩散参数与预后生物标志物之间的相关性。使用受试者工作特征(ROC)分析评估每个dwi衍生参数在鉴别乳腺病变中的诊断性能。结果:观察者间重现性极好(类内相关系数0.827 ~ 0.928)。良性病变的ADC和FROC参数的集中趋势直方图指标(第10、90百分位、平均值、中位数)高于恶性病变,而良性病变的偏度(所有模型)和熵/峰度(ADC、D、μ)较低(所有p FROC平均值和dfroc中位数显示相似的诊断性能)。雌激素受体(ER)阳性组ADC-mean、DFROC-10%、DFROC-mean、DFROC-median、βFROC-10%、βFROC-mean、βFROC-median值均显著低于ER阴性组。孕激素受体(PR)阴性肿瘤的βFROC-10%、β froc均值和β froc中位数均明显高于PR阳性肿瘤。dfroc - skeness、βFROC-10%和βFROC-mean在三阴性和管腔亚型的区分上存在显著差异。结论:基于froc的直方图分析在良恶性分类方面的诊断性能与ADC相当,同时提供了与ER/PR状态、增殖和淋巴结受累的更丰富的关联,反映了单指数扩散未捕捉到的微观结构异质性。
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引用次数: 0
Diagnosis based image quality assessment and enhancement for low dose CT image. 基于诊断的低剂量CT图像质量评估与增强。
IF 2.3 Pub Date : 2025-12-17 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1704113
B Nirupama, B S Dhevdharsan, U Shreya Reddy, J Joshan Athanesious, S Kiruthika

Low-dose Computed Tomography (CT) imaging minimizes radiation exposure but often results in degraded image quality, making diagnosis challenging. Image Quality Assessment (IQA) is a process of quantitatively evaluating the visual quality of images and plays a crucial role in determining whether these CT scans meet the necessary standards for accurate diagnosis. IQA methods help identify issues such as noise, blurriness, or artifacts that may compromise the diagnostic value of the scans. Traditional quality assessment measures how closely an image matches an ideal or reference image. Since obtaining a high-quality reference image is often challenging, an automated quality assessment framework (diagnosis based IQA) using No-Reference Image Quality Assessment (NRIQA) techniques is proposed, allowing quality evaluation and eliminating the need for a high-quality reference image. In this approach, various statistical and structural features are extracted from low-dose CT scans and mapped to radiologist-assigned quality scores, which are subjective evaluations given by experts to train and compare various predictive models. The framework undergoes 100-fold validation, to ensure the reliability of the proposed model. CT images with predicted quality scores of 2 and below undergo spatial domain enhancement to improve their diagnostic value. These enhanced images are then reassessed using the diagnosis based IQA (trained Support Vector Regression) model, demonstrating an improvement in predicted quality scores. In addition, the enhanced images were verified by a radiologist, confirming the effectiveness of the enhancement process. This two-stage approach, automated NRIQA-based quality prediction and selective enhancement provides a reliable, and objective method for assessing and improving low-dose CT image quality.

低剂量计算机断层扫描(CT)成像使辐射暴露最小化,但往往导致图像质量下降,使诊断具有挑战性。图像质量评估(Image Quality Assessment, IQA)是一个定量评价图像视觉质量的过程,对于确定这些CT扫描是否达到准确诊断的必要标准起着至关重要的作用。IQA方法有助于识别可能影响扫描诊断价值的噪声、模糊或伪影等问题。传统的质量评估衡量图像与理想图像或参考图像的匹配程度。由于获得高质量的参考图像通常具有挑战性,因此提出了一种使用无参考图像质量评估(NRIQA)技术的自动质量评估框架(基于诊断的IQA),允许进行质量评估并消除对高质量参考图像的需求。在这种方法中,从低剂量CT扫描中提取各种统计和结构特征,并将其映射到放射科医生指定的质量分数,这是专家给出的主观评估,用于训练和比较各种预测模型。该框架经过100次验证,以确保所提出模型的可靠性。预测质量评分在2分及以下的CT图像进行空域增强以提高其诊断价值。然后使用基于诊断的IQA(训练支持向量回归)模型重新评估这些增强的图像,显示预测质量分数的改善。此外,增强图像由放射科医生验证,确认增强过程的有效性。这种基于nriqa的自动质量预测和选择性增强的两阶段方法为评估和提高低剂量CT图像质量提供了可靠、客观的方法。
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引用次数: 0
Flow diverter implantation for CTA-negative giant vertebral artery dissection aneurysm: a case report. 血流分流术治疗cta阴性巨大椎动脉夹层动脉瘤1例。
IF 2.3 Pub Date : 2025-12-15 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1625207
Jun-Ting Li, Jian-Min Liu, Kai-Jun Zhao

Objective: To evaluate the efficacy of flow diverter implantation for treating CTA-negative giant vertebral artery dissection aneurysm (VADA) and to address the challenges in lesion characterization using MRI.

Methods: A 66-year-old male patient presented with a 3-month history of left facial numbness and dysarthria. Initial MRI-T1 revealed a mixed signal intensity lesion in the CPA region. However, both CTA and digital subtraction angiography (DSA) failed to identify any significant vascular abnormalities. Subsequently, CT-perfusion and dynamic contrast-enhanced computed tomography (DCE-CT) were performed to further characterize the lesion.

Results: DCE-CT revealed a giant VADA, which was significantly larger than the lesion initially detected by MRI and was identified as the cause of hypoperfusion in the posterior circulation. Based on these findings, a flow diverter implantation procedure was performed successfully without complications. Angiographic follow-up at 8 months demonstrated no recurrence of the lesion. At the 14-month clinical follow-up, the patient exhibited complete resolution of symptoms, with a mRS score of 0, indicating an excellent functional outcome.

Conclusion: Flow diverter implantation may be an effective treatment for CTA-negative giant VADAs. The limitations of MRI in accurately characterizing lesion size underscore the necessity of advanced imaging techniques, such as DCE-CT, for precise device selection and deployment.

目的:评价血流分流器植入治疗cta阴性巨大椎动脉夹层动脉瘤(VADA)的疗效,并探讨病变MRI表征的挑战。方法:66岁男性患者,有3个月的左侧面部麻木和构音障碍病史。初始MRI-T1显示CPA区混合信号强度病变。然而,CTA和数字减影血管造影(DSA)均未能发现任何明显的血管异常。随后,行ct灌注和动态对比增强计算机断层扫描(DCE-CT)进一步表征病变。结果:DCE-CT显示一个巨大的VADA,明显大于MRI最初发现的病变,确定为后循环灌注不足的原因。基于这些发现,分流器植入手术成功,无并发症。8个月的血管造影随访显示病变未复发。在14个月的临床随访中,患者表现出症状完全缓解,mRS评分为0,表明功能预后良好。结论:血流分流器植入术可能是治疗cta阴性巨大vada的有效方法。MRI在准确表征病变大小方面的局限性强调了先进成像技术的必要性,如DCE-CT,以精确选择和部署设备。
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引用次数: 0
Construction of a radiomics model based on CT imaging for predicting capsular invasion in thymomas. 基于CT影像预测胸腺瘤包膜浸润的放射组学模型的建立。
IF 2.3 Pub Date : 2025-12-12 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1707488
Shuo Liang, Yanhong Chen, Jianhui Li, Zhenchun Song, Li Zhou, Rui Yin

Objective: To develop a radiomics-based predictive model for capsular invasion in thymomas by applying machine learning algorithms to non-contrast and contrast-enhanced CT imaging. This study aimed to assess the influence of intratumoural and peritumoural regions on capsular invasion prediction and to compare the performance of models derived from these regions within the same dataset, thereby identifying the optimal predictive model.

Methods: Clinical and imaging data were retrospectively collected from 151 patients with thymoma who underwent treatment at Tianjin Chest Hospital between June 2018 and January 2025. Based on pathological findings, patients were categorised into capsular invasion and non-invasion groups and subsequently randomised into a training set (n = 106) and a test set (n = 45) in a 7:3 ratio. Radiomic feature selection was performed using univariate logistic regression analysis followed by least absolute shrinkage and selection operator (LASSO) regression. Predictive models were developed employing multiple machine learning algorithms, including logistic regression. Model performance was evaluated through receiver operating characteristic (ROC) curve analysis, with sensitivity, specificity, F1 score, and decision curve analysis (DCA) used to assess diagnostic accuracy and clinical applicability. DeLong's test was applied to compare the area under the curve (AUC) values between different models. Calibration curves were generated to evaluate model calibration, and model interpretability was examined using the Shapley Additive exPlanations (SHAP) method.

Results: Comparative analysis of machine learning methods across different tumour regions revealed that the support vector machine (SVM) model, developed using radiomic features from the 4 mm peritumoural region on contrast-enhanced CT scans, demonstrated optimal predictive performance. This model achieved area under the curve (AUC) values of 0.890 [95% confidence interval (CI): 0.823-0.956] in the training cohort and 0.888 (95% CI: 0.792-0.983) in the test cohort.

Conclusion: CT-based radiomics demonstrates efficacy in predicting capsular invasion in thymomas, with the peritumoural region proving particularly significant. This methodology shows potential for supporting clinicians in preoperative treatment strategy formulation.

目的:将机器学习算法应用于非对比和增强CT成像,建立胸腺瘤包膜侵袭的放射组学预测模型。本研究旨在评估肿瘤内和肿瘤周围区域对囊膜侵袭预测的影响,并比较在同一数据集中来自这些区域的模型的性能,从而确定最佳预测模型。方法:回顾性收集2018年6月至2025年1月在天津市胸科医院接受治疗的151例胸腺瘤患者的临床和影像学资料。根据病理结果,将患者分为囊膜浸润组和非囊膜浸润组,然后按7:3的比例随机分为训练组(n = 106)和测试组(n = 45)。放射学特征选择使用单变量逻辑回归分析,然后是最小绝对收缩和选择算子(LASSO)回归。预测模型采用多种机器学习算法,包括逻辑回归。通过受试者工作特征(ROC)曲线分析评估模型性能,采用敏感性、特异性、F1评分和决策曲线分析(DCA)评估诊断准确性和临床适用性。采用DeLong’s检验比较不同模型的曲线下面积(AUC)值。生成校准曲线以评估模型的校准,并使用Shapley加性解释(SHAP)方法检验模型的可解释性。结果:不同肿瘤区域的机器学习方法的对比分析表明,使用增强CT扫描肿瘤周围4mm区域的放射学特征开发的支持向量机(SVM)模型显示出最佳的预测性能。该模型在训练队列中的曲线下面积(AUC)为0.890[95%置信区间(CI): 0.823-0.956],在测试队列中为0.888 (95% CI: 0.792-0.983)。结论:基于ct的放射组学在预测胸腺瘤的囊膜侵袭方面具有有效性,其中肿瘤周围区域的预测尤为显著。该方法显示了支持临床医生术前治疗策略制定的潜力。
{"title":"Construction of a radiomics model based on CT imaging for predicting capsular invasion in thymomas.","authors":"Shuo Liang, Yanhong Chen, Jianhui Li, Zhenchun Song, Li Zhou, Rui Yin","doi":"10.3389/fradi.2025.1707488","DOIUrl":"10.3389/fradi.2025.1707488","url":null,"abstract":"<p><strong>Objective: </strong>To develop a radiomics-based predictive model for capsular invasion in thymomas by applying machine learning algorithms to non-contrast and contrast-enhanced CT imaging. This study aimed to assess the influence of intratumoural and peritumoural regions on capsular invasion prediction and to compare the performance of models derived from these regions within the same dataset, thereby identifying the optimal predictive model.</p><p><strong>Methods: </strong>Clinical and imaging data were retrospectively collected from 151 patients with thymoma who underwent treatment at Tianjin Chest Hospital between June 2018 and January 2025. Based on pathological findings, patients were categorised into capsular invasion and non-invasion groups and subsequently randomised into a training set (<i>n</i> = 106) and a test set (<i>n</i> = 45) in a 7:3 ratio. Radiomic feature selection was performed using univariate logistic regression analysis followed by least absolute shrinkage and selection operator (LASSO) regression. Predictive models were developed employing multiple machine learning algorithms, including logistic regression. Model performance was evaluated through receiver operating characteristic (ROC) curve analysis, with sensitivity, specificity, F1 score, and decision curve analysis (DCA) used to assess diagnostic accuracy and clinical applicability. DeLong's test was applied to compare the area under the curve (AUC) values between different models. Calibration curves were generated to evaluate model calibration, and model interpretability was examined using the Shapley Additive exPlanations (SHAP) method.</p><p><strong>Results: </strong>Comparative analysis of machine learning methods across different tumour regions revealed that the support vector machine (SVM) model, developed using radiomic features from the 4 mm peritumoural region on contrast-enhanced CT scans, demonstrated optimal predictive performance. This model achieved area under the curve (AUC) values of 0.890 [95% confidence interval (CI): 0.823-0.956] in the training cohort and 0.888 (95% CI: 0.792-0.983) in the test cohort.</p><p><strong>Conclusion: </strong>CT-based radiomics demonstrates efficacy in predicting capsular invasion in thymomas, with the peritumoural region proving particularly significant. This methodology shows potential for supporting clinicians in preoperative treatment strategy formulation.</p>","PeriodicalId":73101,"journal":{"name":"Frontiers in radiology","volume":"5 ","pages":"1707488"},"PeriodicalIF":2.3,"publicationDate":"2025-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12740908/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145851708","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Endovascular coiling vs. surgical clipping for ruptured intracranial aneurysms: an in-hospital outcome win ratio analysis from a Colombian tertiary center. 颅内动脉瘤破裂的血管内卷绕术与手术夹持术:来自哥伦比亚某三级中心的住院预后胜比分析
IF 2.3 Pub Date : 2025-12-12 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1684496
Santiago Quiceno-Ramírez, Enrique Carlos García-Pretelt, Valentina Mejía-Quiñones, Edgar Folleco-Pazmiño

Background: The optimal management approach for ruptured intracranial aneurysms remains debated, with limited real-world evidence from Latin American populations. This study compared in-hospital outcomes between endovascular coiling and surgical clipping using a hierarchical win ratio (WR) analysis.

Methods: We conducted a single-center retrospective cohort study of 194 patients with ruptured intracranial aneurysms treated at a tertiary referral center (2011-2022). Patients were treated with either endovascular coiling (n = 73) or surgical clipping (n = 121). The primary outcome was the win ratio, analyzing a hierarchical composite endpoint of: (1) in-hospital mortality, (2) unfavorable functional outcome at discharge (modified Rankin Scale >2), (3) major complications, and (4) prolonged ICU stay (>10 days). Secondary analyses included multivariable logistic regression and prespecified subgroup analyses by clinical severity and aneurysm location.

Results: Baseline measured characteristics were balanced between groups. The win ratio significantly favored endovascular coiling (WR 1.75, 95% CI: 1.67-1.84, p < 0.001), indicating 75% more wins in the hierarchical outcome comparison. All individual components significantly favored coiling: mortality (WR = 1.35, p < 0.001), unfavorable functional outcome (WR = 1.53, p < 0.001), major complications (WR = 1.70, p < 0.001), and prolonged ICU stay (WR = 1.25, p < 0.001). Benefits were consistent across subgroups, including Hunt & Hess grades I-II (WR = 2.00) and III-V (WR = 1.96), and across most aneurysm locations. In contrast, multivariate logistic regression for poor outcome showed a favorable but non-significant trend for coiling (OR = 0.55, p = 0.102), while confirming Hunt & Hess ≥3 (OR = 5.54, p < 0.001) and modified Fisher ≥3 (OR = 3.85, p = 0.044) as dominant prognostic factors.

Conclusion: In this Colombian cohort, hierarchical outcome analysis suggested superior in-hospital outcomes for endovascular coiling vs. surgical clipping. However, the substantial attenuation of this association in adjusted analyses indicates that these apparent advantages may largely reflect case selection patterns rather than inherent treatment superiority, as residual confounding by aneurysm complexity cannot be excluded.

背景:颅内动脉瘤破裂的最佳治疗方法仍然存在争议,来自拉丁美洲人群的真实证据有限。本研究使用分层胜比(WR)分析比较了血管内盘绕和手术夹闭的住院结果。方法:我们对在三级转诊中心治疗的194例颅内动脉瘤破裂患者进行了单中心回顾性队列研究(2011-2022)。患者接受血管内盘绕(73例)或手术夹持(121例)治疗。主要终点是胜利比,分析了一个分层复合终点:(1)住院死亡率,(2)出院时不良功能结局(改良Rankin量表bbb2),(3)主要并发症,(4)延长ICU住院时间(>10天)。二次分析包括多变量逻辑回归和根据临床严重程度和动脉瘤位置预先指定的亚组分析。结果:各组间基线测量特征平衡。win比明显支持血管内盘绕(WR 1.75, 95% CI: 1.67-1.84, p p p p p = 0.102),同时确认Hunt & Hess≥3 (OR = 5.54, p p = 0.044)为主要预后因素。结论:在这个哥伦比亚队列中,分级结果分析表明,血管内盘绕术优于手术夹持术。然而,在调整后的分析中,这种关联的显著减弱表明,这些明显的优势可能在很大程度上反映了病例选择模式,而不是固有的治疗优势,因为动脉瘤复杂性的残留混淆不能排除。
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引用次数: 0
Texture analysis improves lung-tissue segmentation on high-resolution computed tomography in COVID-19. 纹理分析改进了COVID-19高分辨率计算机断层扫描的肺组织分割。
IF 2.3 Pub Date : 2025-12-05 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1694478
Mazin Abdalla Hassib, Mohamed E M Garelnabi, Qurashi Mohamed Ali, Amjad Rashed Alyahyawi, Mamdouh Saud Al-Enezi, Mohammed Salih, Ahmed Babikir Abdalla Hasieb

Background: The accurate separation of lung parenchyma, ground-glass opacity (GGO), and intrapulmonary vessels on high-resolution computed tomography (HRCT) in coronavirus disease 2019 (COVID-19) is challenging.

Methods: We conducted a cross-sectional study that analyzed 530 adults (20-40 years) with RT-PCR-confirmed COVID-19. For texture modeling, we sampled 597 regions of interest (ROIs) representing parenchyma, GGO, and intrapulmonary vessels. Region-of-interest-labeled HRCT patches representing parenchyma, GGO, and vessels were analyzed using first- and second-order texture features that were computed across different square window sizes (5 × 5-20 × 20 pixels). Feature selection with stepwise linear discriminant analysis yielded a three-class classifier. The primary endpoint was overall classification accuracy, with the secondary endpoints including the effect of window size and identification of the most informative features.

Results: The 20 × 20-pixel window produced the highest performance, with an overall accuracy of 88.6%. Five co-occurrence-based features (average difference, inverse difference moment, co-occurrence matrix standard deviation, sum entropy, and information correlation measure 1) were the most discriminative; the majority of the errors occurred at tissue boundaries where patches spanned mixed voxels.

Conclusion: Texture-based feature extraction achieved 88.6% ROI-level accuracy and can serve as a supplementary tool during radiological interpretation of chest CT.

背景:2019冠状病毒病(COVID-19)患者在高分辨率计算机断层扫描(HRCT)上准确分离肺实质、磨玻璃影(GGO)和肺内血管具有挑战性。方法:我们进行了一项横断面研究,分析了530名rt - pcr确诊的COVID-19成年人(20-40岁)。为了纹理建模,我们采样了597个兴趣区域(roi),代表实质、GGO和肺内血管。利用不同正方形窗口大小(5 × 5-20 × 20像素)计算的一阶和二阶纹理特征,对代表薄壁组织、GGO和血管的感兴趣区域标记的HRCT斑块进行分析。特征选择与逐步线性判别分析产生了一个三类分类器。主要终点是总体分类准确性,次要终点包括窗口大小的影响和对最具信息量特征的识别。结果:20 × 20像素窗口的准确率最高,达到88.6%。5个基于共现特征(平均差值、逆差矩、共现矩阵标准差、和熵和信息相关测度1)的判别性最强;大多数错误发生在组织边界,其中补丁跨越混合体素。结论:基于纹理的特征提取可达到88.6%的roi水平,可作为胸部CT放射学解释的辅助工具。
{"title":"Texture analysis improves lung-tissue segmentation on high-resolution computed tomography in COVID-19.","authors":"Mazin Abdalla Hassib, Mohamed E M Garelnabi, Qurashi Mohamed Ali, Amjad Rashed Alyahyawi, Mamdouh Saud Al-Enezi, Mohammed Salih, Ahmed Babikir Abdalla Hasieb","doi":"10.3389/fradi.2025.1694478","DOIUrl":"10.3389/fradi.2025.1694478","url":null,"abstract":"<p><strong>Background: </strong>The accurate separation of lung parenchyma, ground-glass opacity (GGO), and intrapulmonary vessels on high-resolution computed tomography (HRCT) in coronavirus disease 2019 (COVID-19) is challenging.</p><p><strong>Methods: </strong>We conducted a cross-sectional study that analyzed 530 adults (20-40 years) with RT-PCR-confirmed COVID-19. For texture modeling, we sampled 597 regions of interest (ROIs) representing parenchyma, GGO, and intrapulmonary vessels. Region-of-interest-labeled HRCT patches representing parenchyma, GGO, and vessels were analyzed using first- and second-order texture features that were computed across different square window sizes (5 × 5-20 × 20 pixels). Feature selection with stepwise linear discriminant analysis yielded a three-class classifier. The primary endpoint was overall classification accuracy, with the secondary endpoints including the effect of window size and identification of the most informative features.</p><p><strong>Results: </strong>The 20 × 20-pixel window produced the highest performance, with an overall accuracy of 88.6%. Five co-occurrence-based features (average difference, inverse difference moment, co-occurrence matrix standard deviation, sum entropy, and information correlation measure 1) were the most discriminative; the majority of the errors occurred at tissue boundaries where patches spanned mixed voxels.</p><p><strong>Conclusion: </strong>Texture-based feature extraction achieved 88.6% ROI-level accuracy and can serve as a supplementary tool during radiological interpretation of chest CT.</p>","PeriodicalId":73101,"journal":{"name":"Frontiers in radiology","volume":"5 ","pages":"1694478"},"PeriodicalIF":2.3,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12714659/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145806512","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
U-FDL-PPE: a unified federated deep learning framework with privacy-preserving explainability for early and accurate viral disease prediction. U-FDL-PPE:一个统一的联邦深度学习框架,具有保护隐私的可解释性,用于早期和准确的病毒性疾病预测。
IF 2.3 Pub Date : 2025-12-04 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1660479
Anupam Agrawal, Asadi Srinivasulu, Anant Mohan, Ramchand Vedaiyan, Kalavagunta Varshita, K Vijaya Bhaskar

Introduction: Early and accurate detection of viral diseases is vital for timely treatment and public health preparedness. However, most existing computer-based prediction systems depend on centralized data storage, which raises concerns about patient privacy, compatibility between different hospitals, and limited clarity on how predictions are made. To address these issues, this study introduces U-FDL-PPE, a new federated deep-learning framework designed to support early and reliable viral disease diagnosis while protecting patient confidentiality and offering clear and understandable prediction insights.

Methods: The framework uses a decentralized learning approach that allows hospitals to train models collaboratively without exchanging raw medical images. MobileNetV2 was used as the core model for classifying chest X-rays, and Grad-CAM was included to produce heatmaps that visually explain how the model arrived at its decisions. The system was tested using the publicly available COVID-19 Radiography Database in a simulated network of three healthcare institutions. Model performance was evaluated using standard measures such as accuracy, F1-score, AUC, and confusion matrix.

Results: Across five training rounds, U-FDL-PPE recorded 88% accuracy, an F1-score of 89.66%, and a multi-class AUC of 0.5192. The confusion matrix showed consistently correct predictions across the three diagnostic categories: COVID-19, Normal, and Viral Pneumonia. The Grad-CAM heatmaps highlighted medically relevant lung regions, confirming that the framework focused on features that clinicians would expect when diagnosing these conditions.

Discussion: The results indicate that U-FDL-PPE is a practical and scalable solution for early viral disease diagnosis, particularly in environments where patient privacy must be preserved. Its combination of decentralized training and visual explanation builds greater trust among clinicians while ensuring that sensitive medical data never leaves the originating institution. The lightweight MobileNetV2 architecture also supports faster processing, making the system suitable for hospitals and clinics with limited computing resources. Overall, U-FDL-PPE provides a privacy-conscious and transparent diagnostic framework that is well-positioned for real-world implementation across healthcare networks.

导言:病毒性疾病的早期和准确检测对于及时治疗和公共卫生准备至关重要。然而,大多数现有的基于计算机的预测系统依赖于集中的数据存储,这引起了对患者隐私、不同医院之间的兼容性以及如何进行预测的有限清晰度的担忧。为了解决这些问题,本研究引入了U-FDL-PPE,这是一种新的联邦深度学习框架,旨在支持早期可靠的病毒性疾病诊断,同时保护患者的机密性,并提供清晰易懂的预测见解。方法:该框架使用分散式学习方法,允许医院在不交换原始医学图像的情况下协作训练模型。MobileNetV2被用作对胸部x射线进行分类的核心模型,Grad-CAM被用于生成热图,以直观地解释模型是如何做出决定的。该系统在三家医疗机构的模拟网络中使用公开的COVID-19放射学数据库进行了测试。使用标准测量方法,如准确性、f1评分、AUC和混淆矩阵来评估模型的性能。结果:在5轮训练中,U-FDL-PPE的准确率为88%,f1得分为89.66%,多类AUC为0.5192。混淆矩阵显示,在COVID-19、正常肺炎和病毒性肺炎这三种诊断类别中,预测始终正确。Grad-CAM热图突出了医学上相关的肺部区域,证实了该框架关注的是临床医生在诊断这些疾病时所期望的特征。讨论:结果表明,U-FDL-PPE是一种实用且可扩展的早期病毒性疾病诊断解决方案,特别是在必须保护患者隐私的环境中。它将分散的培训和可视化解释相结合,在临床医生之间建立了更大的信任,同时确保敏感的医疗数据永远不会离开原始机构。轻量级的MobileNetV2架构还支持更快的处理速度,使该系统适用于计算资源有限的医院和诊所。总体而言,U-FDL-PPE提供了一个注重隐私和透明的诊断框架,适合在医疗保健网络中实际实施。
{"title":"U-FDL-PPE: a unified federated deep learning framework with privacy-preserving explainability for early and accurate viral disease prediction.","authors":"Anupam Agrawal, Asadi Srinivasulu, Anant Mohan, Ramchand Vedaiyan, Kalavagunta Varshita, K Vijaya Bhaskar","doi":"10.3389/fradi.2025.1660479","DOIUrl":"10.3389/fradi.2025.1660479","url":null,"abstract":"<p><strong>Introduction: </strong>Early and accurate detection of viral diseases is vital for timely treatment and public health preparedness. However, most existing computer-based prediction systems depend on centralized data storage, which raises concerns about patient privacy, compatibility between different hospitals, and limited clarity on how predictions are made. To address these issues, this study introduces U-FDL-PPE, a new federated deep-learning framework designed to support early and reliable viral disease diagnosis while protecting patient confidentiality and offering clear and understandable prediction insights.</p><p><strong>Methods: </strong>The framework uses a decentralized learning approach that allows hospitals to train models collaboratively without exchanging raw medical images. MobileNetV2 was used as the core model for classifying chest X-rays, and Grad-CAM was included to produce heatmaps that visually explain how the model arrived at its decisions. The system was tested using the publicly available COVID-19 Radiography Database in a simulated network of three healthcare institutions. Model performance was evaluated using standard measures such as accuracy, F1-score, AUC, and confusion matrix.</p><p><strong>Results: </strong>Across five training rounds, U-FDL-PPE recorded 88% accuracy, an F1-score of 89.66%, and a multi-class AUC of 0.5192. The confusion matrix showed consistently correct predictions across the three diagnostic categories: COVID-19, Normal, and Viral Pneumonia. The Grad-CAM heatmaps highlighted medically relevant lung regions, confirming that the framework focused on features that clinicians would expect when diagnosing these conditions.</p><p><strong>Discussion: </strong>The results indicate that U-FDL-PPE is a practical and scalable solution for early viral disease diagnosis, particularly in environments where patient privacy must be preserved. Its combination of decentralized training and visual explanation builds greater trust among clinicians while ensuring that sensitive medical data never leaves the originating institution. The lightweight MobileNetV2 architecture also supports faster processing, making the system suitable for hospitals and clinics with limited computing resources. Overall, U-FDL-PPE provides a privacy-conscious and transparent diagnostic framework that is well-positioned for real-world implementation across healthcare networks.</p>","PeriodicalId":73101,"journal":{"name":"Frontiers in radiology","volume":"5 ","pages":"1660479"},"PeriodicalIF":2.3,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12713205/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145806509","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
H-VIP: quantifying regional topological contributions of the brain network to cognition. H-VIP:量化脑网络对认知的区域拓扑贡献。
IF 2.3 Pub Date : 2025-12-04 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1686780
Sumita Garai, Sandra Vo, Lucy Blank, Frederick Xu, Jiong Chen, Duy Duong-Tran, Yize Zhao, Brielin C Brown, Li Shen

Introduction: Understanding the role of various brain regions of interest (ROIs) in various cognitive functions or tasks, across healthy or neurodegenerative conditions and multiple degrees of separation, remains a key challenge in neuroscience. Conventional network measures can only capture localized or quasi-localized features of brain ROIs. Topological data analysis (TDA), particularly persistent homology, provides a threshold-free, mathematically rigorous framework for identifying topologically salient features in complex networks. In this paper, we introduce a new metric, the Homological Vertex Importance Profile (H-VIP), designed to assess the relevance of vertices that participate in persistent topological structures (e.g., connected components, cycles or cavities) in brain networks. The H-VIP quantifies the topological features of the network at the ROI (node) level by compressing its higher-order connectivity profile using homological constructs.

Methods: Leveraging homological constructs of brain connectomes, we extend two of our previously defined network-level measures-average persistence and persistence entropy-to an ROI-level measure, i.e., the H-VIP. We then applied the H-VIP to two independent datasets: structural connectomes from the Human Connectome Project and functional connectomes from the Alzheimer's Disease Neuroimaging Initiative. Persistent homology was computed for each network, and H-VIP scores were derived to evaluate vertex-level contributions. Finally, H-VIP scores were used for the prediction of multiple cognitive measures.

Results: In both anatomical and functional brain networks, H-VIP values demonstrate predictive power for various cognitive measures. Notably, the connectivity of the frontal lobe exhibited stronger correlations with cognitive performance than the whole-brain network.

Discussion: H-VIP offers a robust and interpretable means to locate, quantify, and visualize region-specific contributions to network's topological, higher-order landscape. Its ability to detect potentially impaired connectivity at the individual level suggests possible applications in personalized medicine for neurological diseases and disorders. Beyond brain connectomics, the H-VIP can be used for other types of complex networks where topological features are of importance, such as financial, social, or ecological networks.

了解不同的大脑兴趣区(roi)在各种认知功能或任务中的作用,在健康或神经退行性疾病和多种程度的分离中,仍然是神经科学的一个关键挑战。传统的网络测量只能捕获大脑roi的局部或准局部特征。拓扑数据分析(TDA),特别是持久同源性,为识别复杂网络中的拓扑显著特征提供了一个无阈值的、数学上严格的框架。在本文中,我们引入了一个新的度量,即同源顶点重要性轮廓(H-VIP),旨在评估大脑网络中参与持久拓扑结构(例如,连接组件,循环或空腔)的顶点的相关性。H-VIP通过使用同构结构压缩其高阶连接配置文件,在ROI(节点)级别量化网络的拓扑特征。方法:利用大脑连接体的同源结构,我们将之前定义的两个网络级测量-平均持久性和持久性熵-扩展到roi级测量,即H-VIP。然后,我们将H-VIP应用于两个独立的数据集:来自人类连接组项目的结构连接组和来自阿尔茨海默病神经成像倡议的功能连接组。计算每个网络的持久同源性,并导出H-VIP分数来评估顶点水平的贡献。最后,H-VIP评分用于预测多项认知测量。结果:在解剖和功能脑网络中,H-VIP值显示出对各种认知测量的预测能力。值得注意的是,与全脑网络相比,额叶的连通性与认知表现的相关性更强。讨论:H-VIP提供了一种强大的、可解释的方法来定位、量化和可视化特定区域对网络拓扑、高阶景观的贡献。它能够在个体层面检测潜在受损的连接,这可能会应用于神经疾病和紊乱的个性化医疗。除了大脑连接组学,H-VIP还可以用于其他类型的复杂网络,其中拓扑特征很重要,例如金融、社会或生态网络。
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引用次数: 0
Application of one heartbeat acquisition with motion correction algorithm in CCTA of patients with atrial fibrillation: evaluation of coronary artery stenoses using artificial intelligence assisted diagnostic system. 一次心跳采集运动校正算法在房颤患者CCTA中的应用:人工智能辅助诊断系统对冠状动脉狭窄的评估
IF 2.3 Pub Date : 2025-11-25 eCollection Date: 2025-01-01 DOI: 10.3389/fradi.2025.1691838
Shumeng Zhu, Xing Li, Qian Tian, Xiaoqian Jia, Tingting Qu, Jianying Li, Xueyan Zhang, Yannan Cheng, Le Cao, Lihong Chen, Jianxin Guo

Introduction: Motion artifacts induced by atrial fibrillation (AF) present a substantial challenge in coronary computed tomography angiography (CCTA). Wide detectors, rapid scanning, and motion correction algorithms can effectively improve image quality in CCTA. This study aims to evaluate the impact of one-beat acquisition with a motion correction algorithm (Snapshot Freeze 1, SSF1) on the image quality of prospective CCTA in patients with AF, and its diagnostic performance using an artificial intelligence assisted diagnostic system (AI-ADS).

Materials and methods: A total of 91 consecutive patients with AF, who underwent one-beat CCTA were analyzed. Images were reconstructed with SSF1. The subjective and objective image quality of the coronary arteries were evaluated. Using the invasive coronary catheter angiography (ICA) as the reference standard, the diagnostic performance of AI-ADS and AI-ADS + radiologist for stenoses above moderate and severe degrees were calculated.

Results: Effective radiation dose was 2.43 ± 0.88 mSv. The average CT values of all major coronary arteries and branches were greater than 400 HU. All vessels were diagnosable (scores ≥ 3) with good or above ratings at 96.15% (350/364) and 96.70% (352/364). The diagnostic accuracy, sensitivity, specificity and AUC of AI-ADS vs. AI-ADS + radiologist for above moderate stenoses were: (84.62% vs. 91.21%), (89.61% vs. 98.70%), (57.14% vs. 50.00%) and (0.73 vs. 0.74) on patient level; (84.07% vs. 87.64%), (74.07% vs. 85.19%), (89.96% vs. 89.08%) and (0.82 vs. 0.87) on vessel level; (90.84% vs. 93.11%), (63.59% vs. 78.34%), (95.99% vs. 95.91%) and (0.80 vs. 0.87) on segment level. For severe stenoses, these values were: (62.64% vs. 82.42%), (58.62% vs. 91.38%), (69.70% vs. 66.67%) and (0.64 vs. 0.79) on patient level; (82.97% vs. 89.29%), (46.43% vs. 75.00%), (93.93% vs. 93.57%) and (0.70 vs. 0.84) on vessel level; (92.23% vs. 95.16%), (36.92% vs. 66.92%), (98.06% vs. 98.14%) and (0.68 vs. 0.83) on segment level.

Conclusion: One-beat CCTA with SSF1 provides high-quality coronary images for patients with AF. AI-ADS automatically distinguishes coronary images with different stenoses, but the sensitivity of AI-ADS is low, especially for severe stenoses. AI-ADS + radiologist further improves the diagnostic performance.

心房颤动(AF)引起的运动伪影对冠状动脉ct血管造影(CCTA)提出了实质性的挑战。宽检测器、快速扫描和运动校正算法可以有效地提高CCTA图像质量。本研究旨在评估运动校正算法(Snapshot Freeze 1, SSF1)单拍采集对房颤患者前瞻性CCTA图像质量的影响,并利用人工智能辅助诊断系统(AI-ADS)评估其诊断性能。材料和方法:对91例连续行单次CCTA的房颤患者进行分析。用SSF1重建图像。对冠状动脉的主客观图像质量进行评价。以有创冠状动脉导管造影(ICA)为参考标准,计算AI-ADS及AI-ADS +放射科医师对中、重度以上狭窄的诊断效果。结果:有效辐射剂量为2.43±0.88 mSv。各大冠状动脉及分支的平均CT值均大于400 HU。所有血管均可诊断(评分≥3),良好或以上评分分别为96.15%(350/364)和96.70%(352/364)。AI-ADS与AI-ADS +放射科医师对中度以上狭窄的诊断准确率、敏感性、特异性和AUC分别为(84.62% vs 91.21%)、(89.61% vs 98.70%)、(57.14% vs 50.00%)和(0.73 vs 0.74);(84.07% vs. 87.64%)、(74.07% vs. 85.19%)、(89.96% vs. 89.08%)和(0.82 vs. 0.87);(90.84% vs. 93.11%)、(63.59% vs. 78.34%)、(95.99% vs. 95.91%)和(0.80 vs. 0.87)。对于严重的狭窄,这些值在患者水平上分别为(62.64% vs. 82.42%)、(58.62% vs. 91.38%)、(69.70% vs. 66.67%)和(0.64 vs. 0.79);(82.97% vs. 89.29%)、(46.43% vs. 75.00%)、(93.93% vs. 93.57%)和(0.70 vs. 0.84);(92.23% vs. 95.16%)、(36.92% vs. 66.92%)、(98.06% vs. 98.14%)和(0.68 vs. 0.83)。结论:SSF1单拍CCTA为房颤患者提供了高质量的冠状动脉图像,AI-ADS可自动区分不同狭窄的冠状动脉图像,但敏感性较低,尤其是对严重狭窄的患者。AI-ADS +放射科医生进一步提高了诊断性能。
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引用次数: 0
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Frontiers in radiology
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