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Hyperplastic and tubular polyp classification using machine learning and feature selection 利用机器学习和特征选择对增生性息肉和管状息肉进行分类
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100177
Refika Sultan Doğan , Ebru Akay , Serkan Doğan , Bülent Yılmaz

Purpose

The aim of this study is to develop an effective approach for differentiating between hyperplastic and tubular adenoma colon polyps, which is one of the most difficult tasks in colonoscopy procedures. The main research challenge is how to improve the classification of these polyp subtypes applying various focusing levels on the polyp images, data preprocessing approaches, and classification algorithms.

Methods

This study employed 202 colonoscopy videos from a total of 201 patients, focusing on 59 videos containing hyperplastic and tubular adenoma polyps. Manually extract key frames and several feature extraction and classification techniques were applied. The influence of different datasets with various focuses as well as data preprocessing steps on the performance of classification was examined, and AUC values were calculated using ten classifiers.

Results

The study discovered that the optimal dataset, data preprocessing method, and classification algorithm all had significant effects on classification results. The Random Forest model with the Recursive Feature Elimination (RFE) feature selection approach, for example, consistently outperformed other models and achieved the highest AUC value of 0.9067. In terms of accuracy, F1 score, recall, and AUC, the suggested model outperformed a gastroenterologist, nevertheless precision remained slightly lower.

Conclusion

This study emphasizes the importance of dataset selection, data preprocessing, and feature selection in enhancing the classification of difficult colon polyp subtypes. The suggested model offers a promising model for the clinical differentiation of hyperplastic and tubular adenoma polyps, potentially improving diagnostic accuracy in gastroenterology.
目的 本研究旨在开发一种有效的方法来区分增生性和管状腺瘤结肠息肉,这是结肠镜检查过程中最困难的任务之一。研究的主要挑战是如何通过对息肉图像的不同聚焦水平、数据预处理方法和分类算法来改进这些息肉亚型的分类。人工提取关键帧,并应用多种特征提取和分类技术。结果研究发现,最佳数据集、数据预处理方法和分类算法都对分类结果有显著影响。例如,采用递归特征消除(RFE)特征选择方法的随机森林模型一直优于其他模型,AUC 值最高,达到 0.9067。就准确率、F1 分数、召回率和 AUC 而言,建议的模型优于胃肠病学家的模型,但准确率仍然略低。建议的模型为临床区分增生性息肉和管状腺瘤息肉提供了一个很有前景的模型,有望提高消化内科的诊断准确性。
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引用次数: 0
Real-time artificial intelligence validation of critical view of safety in laparoscopic cholecystectomy 人工智能实时验证腹腔镜胆囊切除术的关键安全观
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100153
George Leifman , Tomer Golany , Ehud Rivlin , Wisam Khoury , Ahmad Assalia , Petachia Reissman

Background

Critical View of Safety (CVS) is the accepted strategy to avoid bile duct injury during Laparoscopic Cholecystectomy (LC). In this study, we sought to investigate the accuracy and performance of a trained Artificial Intelligent (AI) model in validation of the CVS achievement during elective LC in a real time operating room setting.

Study design

A deep learning neural network which was previously trained on annotated segments of 700 LC videos to identify the CVS criteria, was integrated into the operating room laparoscopic video system, for continuous monitoring and real-time validation of CVS achievement during elective LC procedures. The system's feedback and surgeon's report were recorded and compared, as well as the overall rate of CVS achievement.

Results

Of 40 consecutive LC, CVS was reported by the surgeons in 34 (85 %). In all the 6 cases where CVS was not achieved due to severe inflammation or anatomy distortion, the AI model agreed with surgeon's report and did not identify CVS. Out of the 34 cases where CVS was achieved, the AI model identified 33. Thus, the AI model detected the CVS achievement with a specificity of 100 % [95%-CI 98.1 %, 100 %] and sensitivity of 97 % [95%-CI 96.1 %, 98.2 %].

Conclusions

A trained AI model can identify CVS during elective LC with very high accuracy in a real time OR setting. Additionally, its use may result in high rates of CVS achievement, thereby improving LC procedure's safety and outcome.

背景临界安全观(CVS)是腹腔镜胆囊切除术(LC)中避免胆管损伤的公认策略。在本研究中,我们试图研究经过训练的人工智能(AI)模型在实时手术室环境中验证择期腹腔镜胆囊切除术(LC)过程中实现 CVS 的准确性和性能。研究设计将深度学习神经网络集成到手术室腹腔镜视频系统中,该网络之前曾在 700 个 LC 视频的注释片段上进行过训练,以识别 CVS 标准,用于持续监控和实时验证择期腹腔镜胆囊切除术(LC)过程中实现 CVS 的情况。结果 在连续 40 例 LC 中,有 34 例(85%)的外科医生报告了 CVS。在所有 6 例因严重炎症或解剖结构变形而未达到 CVS 的病例中,人工智能模型与外科医生的报告一致,未发现 CVS。在 34 例完成 CVS 的病例中,人工智能模型识别出 33 例。因此,人工智能模型检测到 CVS 的特异性为 100 % [95%-CI 98.1 %, 100 %],灵敏度为 97 % [95%-CI 96.1 %, 98.2 %]。此外,使用该模型还能提高 CVS 成功率,从而改善 LC 手术的安全性和结果。
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引用次数: 0
Reinforcement learning in large, structured action spaces: A simulation study of decision support for spinal cord injury rehabilitation 大型结构化行动空间中的强化学习:脊髓损伤康复决策支持模拟研究
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100137
Nathan Phelps , Stephanie Marrocco , Stephanie Cornell , Dalton L. Wolfe , Daniel J. Lizotte

Reinforcement learning (RL) has helped improve decision-making in several domains but can be challenging to apply; this is the case for rehabilitation of people with a spinal cord injury (SCI). Among other factors, applying RL in this domain is difficult because there are many possible treatments (i.e., large action space) and few detailed records of longitudinal treatments and outcomes (i.e., limited training data). Applying Fitted Q Iteration in this domain with linear models and the most natural state and action representation results in problems with convergence and overfitting. However, isolating treatments from one another can mitigate the convergence issue, and treatments for SCIs have meaningful groupings that can be used to combat overfitting. We propose two approaches to grouping treatments so that an RL agent can learn effectively from limited data. One relies on domain knowledge of SCI rehabilitation and the other learns similarities among treatments using an embedding technique. After re-interpreting the data using these treatment grouping approaches in conjunction with our process that isolates the treatment groups, we use Fitted Q Iteration to train an agent that learns to select better treatments. Through a simulation study designed to reflect the properties of SCI rehabilitation, we find that agents trained after using either grouping method can help improve the treatment decisions of individual physiotherapists, but the approach based on domain knowledge offers better performance. Our findings provide a proof of concept that applying RL has the potential to help improve the treatment of those with an SCI and indicates that continued efforts to gather data and apply RL to this domain are worthwhile.

强化学习(RL)有助于改善多个领域的决策,但在应用时可能会遇到困难;脊髓损伤(SCI)患者的康复治疗就属于这种情况。除其他因素外,在这一领域应用 RL 的难度还在于,可能的治疗方法很多(即行动空间大),而纵向治疗和结果的详细记录却很少(即训练数据有限)。在这一领域使用线性模型和最自然的状态与动作表示法进行拟合 Q 迭代会导致收敛和过拟合问题。不过,将治疗方法相互隔离可以缓解收敛问题,SCIs 的治疗方法可以进行有意义的分组,以应对过拟合问题。我们提出了两种对治疗方法进行分组的方法,这样 RL 代理就能从有限的数据中有效地学习。一种方法依赖于 SCI 康复领域的知识,另一种方法则利用嵌入技术学习治疗方法之间的相似性。在使用这些治疗分组方法结合我们分离治疗组的过程重新解释数据后,我们使用拟合 Q 迭代来训练一个代理,使其学会选择更好的治疗方法。通过一项旨在反映 SCI 康复特性的模拟研究,我们发现,使用任何一种分组方法训练出来的代理都能帮助物理治疗师改进治疗决策,但基于领域知识的方法性能更好。我们的研究结果提供了一个概念证明,即应用 RL 有可能帮助改善 SCI 患者的治疗,并表明值得继续努力收集数据并将 RL 应用于该领域。
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引用次数: 0
Deep learning outperforms classical machine learning methods in pediatric brain tumor classification through mass spectra 在通过质谱进行儿科脑肿瘤分类方面,深度学习优于经典机器学习方法
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100178
Thais Maria Santos Bezerra , Matheus Silva de Deus , Felipe Cavalaro , Denise Ribeiro , Ana Luiza Seidinger , Izilda Aparecida Cardinalli , Andreia de Melo Porcari , Luciano de Souza Queiroz , Helio Pedrini , Joao Meidanis
Pediatric brain tumors are the most common cause of death among all childhood cancers and surgical resection usually is the first step in disease management. During surgery, it is important to perform safe gross resection of tumors, retaining as much brain tissue as possible. Therefore, appropriate resection margin delineation is extremely relevant.
Currently available methods for tissue analysis have limited precision, are time-consuming, and often require multiple invasive procedures. Our main goal is to test whether machine learning techniques are capable of classifying the pediatric brain tissue chemical profile generated by DESI-MSI, which is mainly lipidic, into normal or abnormal tissue and into low- and high-grade malignancy subareas within each sample.
Our experiments show that deep learning methods outperform classical machine learning methods in the task of classifying brain tissue from DESI-MSI mass spectra, both in normal versus abnormal tissue, and, for malignant tissues, in low-grade versus high-grade malignancy.
Our conclusion are based on the analysis of 34,870 annotated spectra, obtained from the neoplastic and non-neoplastic microanatomical stratification of individual samples from 116 pediatric patients who underwent brain tumor surgical resection at the Boldrini Children’s Center between 2000 and 2020. Support Vector Machines, Random, Forests, and Least Absolute Shrinkage and Selection Operator (LASSO) were among the classical machine learning techniques evaluated.
小儿脑肿瘤是所有儿童癌症中最常见的死亡原因,手术切除通常是疾病治疗的第一步。在手术过程中,必须对肿瘤进行安全的大体切除,尽可能多地保留脑组织。目前可用的组织分析方法精度有限、耗时长,而且往往需要多个侵入性程序。我们的主要目标是测试机器学习技术是否能够将 DESI-MSI 生成的主要为脂质的小儿脑组织化学图谱分为正常或异常组织,以及每个样本中的低度和高度恶性肿瘤亚区。我们的实验表明,在根据 DESI-MSI 质谱对脑组织进行分类的任务中,深度学习方法优于经典的机器学习方法,无论是正常组织还是异常组织,以及恶性组织中的低度恶性肿瘤还是高度恶性肿瘤。我们的结论是基于对 34,870 个注释光谱的分析得出的,这些光谱来自对 116 名儿科患者的肿瘤性和非肿瘤性微解剖分层,这些患者于 2000 年至 2020 年期间在博尔德里尼儿童中心接受了脑肿瘤手术切除。支持向量机、随机森林和最小绝对缩减与选择操作器(LASSO)是经过评估的经典机器学习技术。
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引用次数: 0
DOTnet 2.0: Deep learning network for diffuse optical tomography image reconstruction DOTnet 2.0:用于漫反射光学断层图像重建的深度学习网络
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2023.100133
Zhen Yu Gordon Ko , Yang Li , Jiulong Liu , Hui Ji , Anqi Qiu , Nanguang Chen

Breast cancer is the most common cancer worldwide. The standard imaging modality for breast cancer screening is X-ray mammography, which suffers from low sensitivities in women with dense breasts and can potentially cause cancers despite a low radiation dosage. Diffuse Optical Tomography (DOT) is a noninvasive imaging technique that can potentially be employed to improve breast cancer early detection. However, conventional model-based algorithms for reconstructing DOT images usually produce low-quality images with limited resolution and low reconstruction accuracy. We propose to integrate deep neural networks (DNNs) with the conventional DOT reconstruction methods. This hybrid framework significantly enhances image quality. The DNNs have been trained and tested with sample data derived from clinically relevant breast models. The sample dataset contains blood vessel structures from breast structures and artificially created vessels using the Lindenmayer-system algorithm. By comparing the hybrid reconstruction with the ground truth image, we demonstrated a multi scale - structural similarity index measure (MS-SSIM) score of 0.80–0.90. Whereas using conventional reconstruction, MS-SSIM provided a much inferior score of 0.36–0.59. In terms of DOT image quality, both qualitative and quantitative assessments of the reconstructed images signify that the hybrid approach is superior to conventional methods. This improvement suggests that DOT can potentially become a viable alternative to breast cancer screening, providing a step towards the next-generation device for optical mammography.

乳腺癌是全球最常见的癌症。乳腺癌筛查的标准成像模式是 X 射线乳房 X 光造影术,这种造影术对乳房致密的妇女灵敏度较低,尽管辐射剂量较低,但仍有可能导致癌症。弥散光学断层扫描(DOT)是一种非侵入性成像技术,可用于改善乳腺癌的早期检测。然而,传统的基于模型的 DOT 图像重建算法通常会生成分辨率有限、重建精度低的低质量图像。我们建议将深度神经网络(DNN)与传统的 DOT 重建方法相结合。这种混合框架可大大提高图像质量。DNN 已通过从临床相关乳腺模型中提取的样本数据进行了训练和测试。样本数据集包含乳腺结构中的血管结构,以及使用林登迈耶系统算法人工创建的血管。通过比较混合重建与地面实况图像,我们发现多尺度-结构相似性指数测量(MS-SSIM)得分在 0.80-0.90 之间。而使用传统重建方法时,MS-SSIM 的得分仅为 0.36-0.59 分,相差甚远。就 DOT 图像质量而言,对重建图像的定性和定量评估都表明,混合方法优于传统方法。这种改进表明 DOT 有可能成为乳腺癌筛查的一种可行的替代方法,为下一代光学乳腺 X 射线摄影设备的问世迈出了一步。
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引用次数: 0
Artificial intelligence in child development monitoring: A systematic review on usage, outcomes and acceptance 人工智能在儿童发展监测中的应用:关于使用情况、结果和接受程度的系统回顾
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100134
Lisa Reinhart , Anne C. Bischops , Janna-Lina Kerth , Maurus Hagemeister , Bert Heinrichs , Simon B. Eickhoff , Juergen Dukart , Kerstin Konrad , Ertan Mayatepek , Thomas Meissner

Objectives

Recent advances in Artificial Intelligence (AI) offer promising opportunities for its use in pediatric healthcare. This is especially true for early identification of developmental problems where timely intervention is essential, but developmental assessments are resource-intensive. AI carries potential as a valuable tool in the early detection of such developmental issues. In this systematic review, we aim to synthesize and evaluate the current literature on AI-usage in monitoring child development, including possible clinical outcomes, and acceptability of such technologies by different stakeholders.

Material and methods

The systematic review is based on a literature search comprising the databases PubMed, Cochrane Library, Scopus, Web of Science, Science Direct, PsycInfo, ACM and Google Scholar (time interval 1996–2022). All articles addressing AI-usage in monitoring child development or describing respective clinical outcomes and opinions were included.

Results

Out of 2814 identified articles, finally 71 were included. 70 reported on AI usage and one study dealt with users’ acceptance of AI. No article reported on potential clinical outcomes of AI applications. Articles showed a peak from 2020 to 2022. The majority of studies were from the US, China and India (n = 45) and mostly used pre-existing datasets such as electronic health records or speech and video recordings. The most used AI methods were support vector machines and deep learning.

Conclusion

A few well-proven AI applications in developmental monitoring exist. However, the majority has not been evaluated in clinical practice. The subdomains of cognitive, social and language development are particularly well-represented. Another focus is on early detection of autism. Potential clinical outcomes of AI usage and user's acceptance have rarely been considered yet. While the increase of publications in recent years suggests an increasing interest in AI implementation in child development monitoring, future research should focus on clinical practice application and stakeholder's needs.

目标人工智能(AI)的最新进展为其在儿科医疗保健领域的应用提供了广阔的前景。尤其是在早期识别发育问题方面,及时干预至关重要,但发育评估需要大量资源。人工智能有望成为早期发现此类发育问题的重要工具。在这篇系统性综述中,我们旨在综合并评估当前有关人工智能在儿童发育监测中的应用的文献,包括可能的临床结果以及不同利益相关者对此类技术的接受程度。材料与方法该系统性综述基于文献检索,包括 PubMed、Cochrane Library、Scopus、Web of Science、Science Direct、PsycInfo、ACM 和 Google Scholar 等数据库(时间间隔为 1996-2022 年)。所有涉及人工智能在儿童发育监测中的应用或描述相关临床结果和观点的文章均被收录。其中 70 篇报道了人工智能的使用情况,1 篇研究涉及用户对人工智能的接受程度。没有一篇文章报道了人工智能应用的潜在临床结果。文章显示,2020 年至 2022 年为高峰期。大多数研究来自美国、中国和印度(n = 45),大多使用已有数据集,如电子健康记录或语音和视频记录。使用最多的人工智能方法是支持向量机和深度学习。然而,大多数应用尚未在临床实践中进行评估。认知、社交和语言发展等子领域的应用尤为突出。另一个重点是自闭症的早期检测。人工智能使用的潜在临床结果和用户的接受程度还很少得到考虑。虽然近年来发表的论文越来越多,表明人们对人工智能在儿童发育监测中的应用越来越感兴趣,但未来的研究应侧重于临床实践应用和利益相关者的需求。
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引用次数: 0
Feasibility of deep learning to predict tinnitus patient outcomes 深度学习预测耳鸣患者预后的可行性
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100141
Katherine S. Adcock , Gabriel Byczynski , Emma Meade , Sook Ling Leong , Richard Gault , Hubert Lim , Sven Vanneste

Advances in machine and deep learning techniques provide a novel approach in understanding complex patterns within large datasets, leading to an implementation of personalized medicine approaches to support clinical decision making. Results from recent clinical trials (TENT-A1 and TENT-A2 studies; clinicaltrials.gov: NCT02669069 and NCT03530306) support that a novel bimodal neuromodulation approach could be a breakthrough treatment for patients with tinnitus, which adversely affects 10–15 % of the population. Given the heterogeneity of symptoms, it is important to identify whether treatment has an optimal effect on specific subgroups of tinnitus patients. The current study is a first look at the feasibility of using deep learning modelling on patient reported data to predict treatment outcomes in individuals with tinnitus, and highlights what features are most beneficial for clinical decision making.

机器学习和深度学习技术的进步为理解大型数据集中的复杂模式提供了一种新方法,从而实现了支持临床决策的个性化医疗方法。最近的临床试验(TENT-A1 和 TENT-A2 研究;clinicaltrials.gov:NCT02669069和NCT03530306)的结果表明,新型双模神经调控方法可能成为治疗耳鸣患者的突破性方法,耳鸣对10-15%的人口造成了不良影响。鉴于症状的异质性,确定治疗是否对特定的耳鸣患者亚群有最佳效果非常重要。目前的研究首次探讨了在患者报告数据上使用深度学习建模预测耳鸣患者治疗效果的可行性,并强调了哪些特征最有利于临床决策。
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引用次数: 0
Detection of cardiovascular disease using explainable artificial intelligence and gut microbiota data 利用可解释人工智能和肠道微生物群数据检测心血管疾病
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100180
Can Duyar , Simone Oliver Senica , Habil Kalkan

Purpose:

Gut microbiota are defined as the microbial population of the intestines. They include various types of bacteria which can influence and predict the existence or onset of some specific diseases. Therefore, it is a common practice in medicine to analyze the gut microbiota for diagnostic purposes by analyzing certain measurable biochemical features associated with the disease under investigation. However, the evaluation of all the data collected from the gut microbiota is a labor-intensive process. Artificial Intelligence (AI) may be a helpful tool to identify the hidden patterns in gut microbiota for the detection of disease and other classification problems.

Methods:

In this study, we propose a deep neural model based on a one-dimensional convolutional neural network (1D-CNN) to detect cardiovascular disease using bacterial taxonomy and OTU (Operational Taxonomic Unit) table data. The developed AI method is compared to classical machine learning algorithms, regression, boosting algorithms and a deep model, Tabular Network (TabNet), developed for tabular data and obtained outperforming classification results.

Results:

According to AUC (Area Under Curve) values, boosting and regression methods outperformed the classical machine learning methods. However, the highest value of 97.09 AUC was obtained with the developed 1D-CNN model by using bacterial taxonomy data even with less then expected number of samples. Using explainable AI, nine bacteria were identified which the models find important for classification.

Conclusion:

The proposed method is robust and well adapted to taxonomy data in tabular form. It can be easily adapted to detect other diseases by using taxonomy data. The study also investigated the effect on barcode sequence for the classification, but the result showed that barcode sequences do not contribute to the bacterial taxonomy data for the estimation of CVD disease.
目的:肠道微生物群是指肠道中的微生物种群。它们包括各种类型的细菌,可影响和预测某些特定疾病的存在或发病。因此,医学界通常通过分析与所研究疾病相关的某些可测量生化特征来分析肠道微生物群,从而达到诊断目的。然而,评估从肠道微生物群收集到的所有数据是一个劳动密集型过程。方法:在本研究中,我们提出了一种基于一维卷积神经网络(1D-CNN)的深度神经模型,利用细菌分类学和OTU(操作分类单元)表数据检测心血管疾病。将所开发的人工智能方法与经典机器学习算法、回归算法、提升算法以及针对表格数据开发的深度模型--表格网络(TabNet)进行了比较,得出了优于传统分类方法的结果。然而,在使用细菌分类数据时,即使样本数量少于预期,所开发的 1D-CNN 模型也获得了 97.09 的最高 AUC 值。利用可解释人工智能,确定了模型认为对分类很重要的九种细菌。通过使用分类数据,该方法可轻松用于检测其他疾病。研究还调查了条形码序列对分类的影响,但结果表明,条形码序列对细菌分类数据用于心血管疾病的估计没有帮助。
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引用次数: 0
Development of contactless human vital signs monitoring device with remote-photoplethysmography using adaptive region-of-interest and hybrid processing methods 利用自适应兴趣区和混合处理方法开发带有远程血压计的非接触式人体生命体征监测设备
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100160
Dessy Novita , Fajar Wira Adikusuma , Nanang Rohadi , Bambang Mukti Wibawa , Agus Trisanto , Irma Ruslina Defi , Sherllina Rizqi Fauziah

Vital sign assessment is an examination that indicates changes in health. Direct contact during vital signs assessment can increase the risk of disease transmission. This research aimed to develop a contactless vital sign monitoring prototype that includes heart rate, respiratory rate, blood pressure, and oxygen saturation using a digital camera based on remote photoplethysmography with an adaptive region of interest. The adaptive region-of-interest method uses face detection and skin segmentation to generate red-green-blue signals, taking only the skin pixels of the patients while also minimising the effect of motion artefacts. The hybrid processing method combines several vital sign extraction methods to filter external irrelevant factors and produce heart rate, respiratory rate, blood pressure, and blood oxygen saturation values. In addition, the prototype was tested on 50 participants using standard vital sign assessment tools for comparison. The technical specification test of the prototype concluded that the optimal distance of this prototype was up to 2 m with a processing time of 2 s for every 1-s video. The vital signs results were presented using Bland-Altman, which showed that although the Bland-Altman plots revealed a substantial variance in the limits of agreement (±15–20 mmHg for blood pressure, ±15–17 bpm for heart rate, ±4–6 bpm for respiratory rate, and ±1–3 % for blood oxygen saturation), the mean differences for all vital signs were small (±0.7–5 mmHg for blood pressure, ±0.4–0.6 bpm for heart rate, ±0.5–0.7 bpm for respiratory rate, ±0.4–0.6 for blood oxygen saturation) and most data points were within the limits. While further clinical studies are needed to assess its reliability in monitoring specific medical conditions, the prototype has shown an acceptable agreement in assessing vital signs compared to the conventional methods, making it feasible for further development into a medical device.

生命体征评估是一种显示健康变化的检查。生命体征评估过程中的直接接触会增加疾病传播的风险。本研究旨在开发一种非接触式生命体征监测原型,它包括心率、呼吸频率、血压和血氧饱和度,使用的数码相机基于自适应兴趣区域的远程光压计。自适应兴趣区方法使用人脸检测和皮肤分割来生成红绿蓝信号,只采集病人的皮肤像素,同时将运动伪影的影响降至最低。混合处理方法结合了多种生命体征提取方法,以过滤外部无关因素,并生成心率、呼吸频率、血压和血氧饱和度值。此外,还使用标准生命体征评估工具对 50 名参与者进行了原型测试,以进行比较。原型的技术规格测试结果表明,该原型的最佳使用距离为 2 米,每 1 秒视频的处理时间为 2 秒。生命体征结果使用布兰-阿尔特曼(Bland-Altman)图显示,虽然布兰-阿尔特曼图显示出一致性极限的巨大差异(血压为 ±15-20 mmHg,心率为 ±15-17 bpm,呼吸频率为 ±4-6 bpm,血氧饱和度为 ±1-3%),但所有生命体征的平均差异都很小(血压为 ±0.7-5 mmHg,心率为 ±15-17bpm,呼吸频率为 ±4-6 bpm,血氧饱和度为 ±1-3%)。7-5毫米汞柱,心率为±0.4-0.6 bpm,呼吸频率为±0.5-0.7 bpm,血氧饱和度为±0.4-0.6),大多数数据点都在限值范围内。虽然还需要进一步的临床研究来评估其在监测特定医疗状况方面的可靠性,但与传统方法相比,该原型在评估生命体征方面表现出了可接受的一致性,因此将其进一步开发成医疗设备是可行的。
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引用次数: 0
Estimating the prevalence of diabetic retinopathy in electronic health records with massive missing labels 估算电子健康记录中大量缺失标签的糖尿病视网膜病变患病率
Pub Date : 2024-01-01 DOI: 10.1016/j.ibmed.2024.100154
Ye Liang , Ru Wang , Yuchen Wang , Tieming Liu

Objective

The paper aims to address the problem of massive unlabeled patients in electronic health records (EHR) who potentially have undiagnosed diabetic retinopathy (DR). It is desired to estimate the actual DR prevalence in EHR with 96 % missing labels.

Materials and methods

The Cerner Health Facts data are used in the study, with 3749 labeled DR patients and 97,876 unlabeled diabetic patients. This extensive dataset spans the demographics of the United States over the past two decades. We implemented state-of-art positive-unlabeled learning methods, including ensemble-based support vector machine, ensemble-based random forest, and Bayesian finite mixture modeling.

Results

The estimated DR prevalence in the population represented by Cerner EHR is approximately 25 % and the classification techniques generally achieve an AUC of around 87 %. As a by-product, a predictive inference on the risk of DR based on a patient's personalized medical information is derived.

Discussion

Missing labels is a common issue for EHR data quality. Ignoring these missing labels can lead to biased results in the analyses of EHR data. The problem is especially severe in the context of DR. It is thus important to use machine learning or statistical tools to identify the unlabeled patients. The tool in this paper helps both data analysts and clinicians in their practices.

本文旨在解决电子健康记录(EHR)中大量未标记患者的问题,这些患者可能患有未诊断的糖尿病视网膜病变(DR)。研究使用了 Cerner Health Facts 数据,其中包括 3749 名已标记的 DR 患者和 97,876 名未标记的糖尿病患者。这一广泛的数据集涵盖了美国过去二十年的人口统计数据。我们采用了最先进的正向无标记学习方法,包括基于集合的支持向量机、基于集合的随机森林和贝叶斯有限混合建模。作为副产品,根据患者的个性化医疗信息得出了 DR 风险的预测推断。忽略这些缺失标签会导致 EHR 数据分析结果出现偏差。这一问题在 DR 中尤为严重。因此,使用机器学习或统计工具来识别未标记的患者非常重要。本文中的工具对数据分析师和临床医生的实践都有帮助。
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Intelligence-based medicine
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