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Structural determination of oleanane-28,13β-olide and taraxerane-28,14β-olide fluoro­lactonization products from the reaction of oleanolic acid with SelectfluorTM 齐墩果酸与 SelectfluorTM 反应生成的齐墩果烷-28,13β-内酯和蒲公英内酯-28,14β-内酯氟内酰化产物的结构测定
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006480
Megan A. Eadsforth , Linghan Kong , George Whitehead , Iñigo J. Vitórica-Yrezábal , Raymond T. O’Keefe , Richard A. Bryce , Roger C. Whitehead

X-ray analysis and structure determination of fluoro­lactonization products from the reaction of oleanolic acid with SelectfluorTM are reported.

The X-ray crystal structure data of 12-α-fluoro-3β-hy­droxy­olean-28,13β-olide methanol hemisolvate, 2C30H47FO3·CH3OH, (1), and 12-α-fluoro-3β-hy­droxy­taraxer-28,14β-olide methanol hemisolvate, 2C30H47FO3·CH3OH, (2), are described. The fluoro­lactonization of oleanolic acid using SelectfluorTM yielded a mixture of the six-membered δ-lactone (1) and the unusual seven-membered γ-lactone (2) following a 1,2-shift of methyl C-27 from C-14 to C-13.

介绍了 12-α-fluoro-3β-hydroxyolean-28,13β-olide methanol hemisolvate, 2C30H47FO3-CH3OH, (1) 和 12-α-fluoro-3β-hydroxytaraxer-28,14β-olide methanol hemisolvate, 2C30H47FO3-CH3OH, (2) 的 X 射线晶体结构数据。使用 SelectfluorTM 对齐墩果酸进行氟内酯化反应,将 C-27 甲基从 C-14 位移 1,2 次到 C-13 位后,得到了六元 δ-内酯(1)和不常见的七元 γ-内酯(2)的混合物。
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引用次数: 0
Crystal structures of four thio­glycosides involving carbamimido­thio­ate groups 涉及硫代氨基甲酰亚胺基团的四种巯基糖苷的晶体结构
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006455
Mamdouh A. Abu-Zaied , Galal A. Nawwar , Galal H. Elgemeie , Peter G. Jones

The structures of the four thio­glycosides, all Z-configured across the C=N(CN) moiety, differ in many important torsion angles. The C—N bond lengths at the central carbon atom of the carbamimido­thio­ate group are almost equal. Three of the four structures form layers by hydrogen bonding.

The compounds 2′,3′,4′,6′-tetra-O-acetyl-β-d-gluco­pyranosyl N′-cyano-N-phenyl­carbamimido­thio­ate (C22H25N3O9S, 5a), 2′,3′,4′,6′-tetra-O-acetyl-β-d-galacto­pyranosyl N′-cyano-N-phenyl­carbamimido­thio­ate, (C22H25N3O9S, 5b), 2′,3′,4′,6′-tetra-O-acetyl-β-d-galacto­pyranosyl N′-cyano-N-methyl­carbamimido­thio­ate (C17H23N3O9S, 5c), and 2′,3′,4′,6′-tetra-O-acetyl-β-d-galacto­pyranosyl N′-cyano-N-p-tolyl­carbamimido­thio­ate (C23H27N3O9S, 5d) all crystallize in P212121 with Z = 4. For all four structures, the configuration across the central (formal) C=N(CN) double bond of the carbamimido­thio­ate group is Z. The torsion angles C5—O1—C1—S (standard sugar numbering) are all close to 180°, confirming the β position of the substituent. Compound 5b involves an intra­molecular hydrogen bond N—H⋯O1; in 5c this contact is the weaker branch of a three-centre inter­action, whereas in 5a and 5d the H⋯O distances are much longer and do not represent significant inter­actions. The C—N bond lengths at the central carbon atom of the carbamimido­thio­ate group are almost equal. All C—O—C=O torsion angles of the acetyl groups correspond to a synperiplanar geometry, but otherwise all four mol­ecules display a high degree of conformational flexibility, with many widely differing torsion angles for equivalent groups. In the crystal packing, 5a, 5c and 5d form layer structures involving the classical hydrogen bond N—H⋯Ncyano and a variety of ‘weak’ hydrogen bonds C—H⋯O or C—H⋯S. The packing of 5b is almost featureless and involves a large number of borderline ‘weak’ hydrogen bonds. In an appendix, a potted history of wavelength preferences for structure determination is presented and it is recommended that, even for small organic crystals in non-centrosymmetric space groups, the use of Mo radiation should be considered.

化合物 2′,3′,4′,6′-四-O-乙酰基-β-D-吡喃葡萄糖基 N′-氰基-N-苯基氨基甲酰亚胺硫酸盐(C22H25N3O9S,5a)、2′,3′,4′,6′-四-O-乙酰基-β-D-吡喃半乳糖基 N′-氰基-N-苯基氨基甲酰亚胺硫酸盐(C22H25N3O9S,5b),2′,3′,4′、6′-tetra-O-acetyl-β-D-galactopyranosyl N′-cyano-N-methylcarbamimidothioate (C17H23N3O9S, 5c), and 2′,3′,4′、6′-tetra-O-acetyl-β-D-galactopyranosyl N′-cyano-N-p-tolylcarbamimidothioate (C23H27N3O9S,5d)都在 Z = 4 的 P212121 中结晶。所有这四种结构中,硫代氨基甲酰亚胺基团中央(形式)C=N(CN)双键的构型均为 Z。化合物 5b 涉及分子内氢键 N-H...O1;在 5c 中,这种接触是三中心相互作用的较弱分支,而在 5a 和 5d 中,H...O 的距离要长得多,并不代表显著的相互作用。硫代氨基甲酰亚胺基团中心碳原子上的 C-N 键长度几乎相等。乙酰基的所有 C-O-C=O 扭转角都与同位面几何形状一致,但除此之外,所有四个分子都显示出高度的构象灵活性,同等基团的扭转角相差很大。在晶体填料中,5a、5c 和 5d 形成了层状结构,涉及经典氢键 N-H...Ncyano 和各种 "弱 "氢键 C-H...O 或 C-H...S。附录中介绍了结构测定波长偏好的历史,建议即使是非中心对称空间群中的小型有机晶体,也应考虑使用 Mo 辐射。
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引用次数: 0
Crystal structure of 4-bromo-5,7-dimeth­oxy-2,3-di­hydro-1H-inden-1-one 4-溴-5,7-二甲氧基-2,3-二氢-1H-茚-1-酮的晶体结构
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006522
Sri Hari Galla , Jayalakshmi Sridhar , Joel T. Mague , Xiaodong Zhang , Kira D. White , Qiang Zhang , James P. Donahue

In the title mol­ecule, C11H11BrO3, the di­hydro­indene moiety is essentially planar but with a slight twist in the saturated portion of the five-membered ring. The meth­oxy groups lie close to the above plane. In the crystal, π-stacking inter­actions between six-membered rings form stacks of mol­ecules extending along the a-axis directions, which are linked by weak C—H⋯O and C—H⋯Br hydrogen bonds.

In the title mol­ecule, C11H11BrO3, the di­hydro­indene moiety is essentially planar but with a slight twist in the saturated portion of the five-membered ring. The meth­oxy groups lie close to the above plane. In the crystal, π-stacking inter­actions between six-membered rings form stacks of mol­ecules extending along the a-axis direction, which are linked by weak C—H⋯O and C—H⋯Br hydrogen bonds. A Hirshfeld surface analysis was performed showing H⋯H, O⋯H/H⋯O and Br⋯H/H⋯Br contacts make the largest contributions to inter­molecular inter­actions in the crystal.

在标题分子 C11H11BrO3 中,二氢茚分子基本上是平面的,但五元环的饱和部分略有扭曲。甲氧基靠近上述平面。在晶体中,六元环之间的 π 堆积相互作用形成了沿 a 轴方向延伸的分子堆,这些分子堆通过弱的 C-H...O 和 C-H...Br 氢键相连。进行的 Hirshfeld 表面分析表明,H...H、O...H/H...O 和 Br...H/H...Br 接触对晶体中的分子间相互作用贡献最大。
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引用次数: 0
Crystal structure of catena-poly[[methanoldioxidouranium(VI)]-μ-2-[5-(2-oxidophen­yl)-1H-1,2,4-triazol-3-yl]acetato-κ2O:O′] catena-poly[[methanoldioxidouranium(VI)]-μ-2-[5-(2-oxidophenyl)-1H-1,2,4-triazol-3-yl]acetato-κ2 O:O′] 的晶体结构
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006637
Oleksandr V. Vashchenko , Dmytro M. Khomenko , Roman O. Doroshchuk , Alexandru-Constantin Stoica , Olga Yu. Vassilyeva , Rostyslav D. Lampeka

In [UO2L(CH3OH)]n, the acetate group of the 1,2,4-triazol-based ligand bridges two uranyl cations, forming a neutral zigzag chain. A solid-state LMCT transition at 463 nm is responsible for the light-red colour of the compound.

In the title complex, [U(C10H7N3O3)O2(CH3OH)]n, the UVI cation has a typical penta­gonal–bipyramidal environment with the equatorial plane defined by one N and two O atoms of one doubly deprotonated 2-[5-(2-hy­droxy­phen­yl)-1H-1,2,4-triazol-3-yl]acetic acid ligand, a carboxyl­ate O atom of the symmetry-related ligand and the O atom of the methanol mol­ecule [U—N/Oeq 2.256 (4)–2.504 (5) Å]. The axial positions are occupied by two oxide O atoms. The equatorial atoms are almost coplanar, with the largest deviation from the mean plane being 0.121 Å for one of the O atoms. The benzene and triazole rings of the tetra­dentate chelating–bridging ligand are twisted by approximately 21.6 (2)° with respect to each other. The carboxyl­ate group of the ligand bridges two uranyl cations, forming a neutral zigzag chain reinforced by a strong O—H⋯O hydrogen bond. In the crystal, adjacent chains are linked into two-dimensional sheets parallel to the ac plane by C/N—H⋯N/O hydrogen bonding and π–π inter­actions. Further weak C—H⋯O contacts consolidate the three-dimensional supra­molecular architecture. In the solid state, the compound shows a broad medium intensity LMCT transition centred around 463 nm, which is responsible for its red colour.

在标题复合物[U(C10H7N3O3)O2(CH3OH)] n 中,UVI 阳离子具有典型的五角双锥环境,其赤道面由一个双去质子化 2-[5-(2-hydroxyphenyl)-1H-1、2,4-三唑-3-基]乙酸配体的一个 N 原子和两个 O 原子、对称性相关配体的一个羧基 O 原子以及甲醇分子的 O 原子所确定的赤道平面[U-N/Oeq 2.256 (4)-2.504 (5) Å].轴向位置被两个氧化物 O 原子占据。赤道原子几乎共面,其中一个 O 原子与平均平面的最大偏差为 0.121 Å。四价螯合桥接配体的苯环和三唑环相互扭曲约 21.6 (2)°。配体的羧基桥接两个铀酰阳离子,形成一个中性的人字链,并通过一个强大的 O-H...O 氢键得到加强。在晶体中,相邻的链通过 C/N-H...N/O 氢键和 π-π 相互作用连接成平行于 ac 平面的二维薄片。进一步的弱 C-H...O 接触巩固了三维超分子结构。在固态下,该化合物显示出以 463 纳米为中心的宽中等强度 LMCT 转变,这也是其呈现红色的原因。
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引用次数: 0
Rerefinement of the crystal structure of BiF5 重新确定 BiF5 的晶体结构
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024005759
Tobias Burghardt Wassermann , Florian Kraus

Redetermination of the crystal structure of BiF5 was undertaken to a much higher precision and quantum chemical calculations for an assignment of the Raman and IR bands.

The crystal structure of bis­muth penta­fluoride, BiF5, was rerefined from single-crystal data. BiF5 crystallizes in the α-UF5 structure type in the form of colorless needles. In comparison with the previously reported crystal-structure model [Hebecker (1971#). Z. Anorg. Allg. Chem.384, 111–114], the lattice parameters and fractional atomic coordinates were determined to much higher precision and all atoms were refined anisotropically, leading to a significantly improved structure model. The Bi atom (site symmetry 4/m..) is surrounded by six F atoms in a distorted octa­hedral coordination environment. The [BiF6] octa­hedra are corner-linked to form infinite straight chains extending parallel to [001]. Density functional theory (DFT) calculations at the PBE0/TZVP level of theory were performed on the crystal structure of BiF5 to calculate its IR and Raman spectra. These are compared with experimental data.

根据单晶数据重新确定了五氟化铋(BiF5)的晶体结构。BiF5 以无色针状的 α-UF5 结构类型结晶。与之前报告的晶体结构模型[Hebecker (1971). Z. Anorg. Allg. Chem. 384, 111-114]相比,晶格参数和分数原子坐标的确定精度更高,所有原子都经过异向精炼,从而大大改进了结构模型。Bi 原子(位点对称性 4/m...)被六个 F 原子包围,处于扭曲的八面体配位环境中。[BiF6]八面体以角连接,形成平行于[001]延伸的无限直链。在 PBE0/TZVP 理论水平上对 BiF5 的晶体结构进行了密度泛函理论(DFT)计算,以计算其红外光谱和拉曼光谱。计算结果与实验数据进行了比较。
{"title":"Rerefinement of the crystal structure of BiF5","authors":"Tobias Burghardt Wassermann ,&nbsp;Florian Kraus","doi":"10.1107/S2056989024005759","DOIUrl":"10.1107/S2056989024005759","url":null,"abstract":"<div><p>Redetermination of the crystal structure of BiF<sub>5</sub> was undertaken to a much higher precision and quantum chemical calculations for an assignment of the Raman and IR bands.</p></div><div><p>The crystal structure of bis­muth penta­fluoride, BiF<sub>5</sub>, was rerefined from single-crystal data. BiF<sub>5</sub> crystallizes in the α-UF<sub>5</sub> structure type in the form of colorless needles. In comparison with the previously reported crystal-structure model [Hebecker (1971<span><span>#</span></span>). <em>Z. Anorg. Allg. Chem.</em><strong>384</strong>, 111–114], the lattice parameters and fractional atomic coordinates were determined to much higher precision and all atoms were refined anisotropically, leading to a significantly improved structure model. The Bi atom (site symmetry 4/<em>m</em>..) is surrounded by six F atoms in a distorted octa­hedral coordination environment. The [BiF<sub>6</sub>] octa­hedra are corner-linked to form infinite straight chains extending parallel to [001]. Density functional theory (DFT) calculations at the PBE0/TZVP level of theory were performed on the crystal structure of BiF<sub>5</sub> to calculate its IR and Raman spectra. These are compared with experimental data.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 826-828"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141666288","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, structural studies and Hirshfeld surface analysis of 2-[(4-phenyl-1H-1,2,3-triazol-1-yl)methyl]pyridin-1-ium hexa­kis­(nitrato-κ2O,O′)thorate(IV) 2-[(4-phenyl-1H-1,2,3-triazol-1-yl)methyl]pyridin-1-ium hexa-kis-(nitrato-κ2 O,O')thorate(IV) 的合成、结构研究和 Hirshfeld 表面分析。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006352
Shalini Rangarajan , Sonu Sheokand , Victoria L. Blair , Glen B. Deacon , Maravanji S. Balakrishna

The complex 2-[(4-phenyl-1H-1,2,3-triazol-1-yl)meth­yl]pyridin-1-ium hexa­kis­(nitrato-O,O′)thorate was synthesized from layered solutions of Th(NO3)4·5H2O and 2-[(4-phenyl-1H-1,2,3-triazol-1-yl)meth­yl]pyridine (L).

Reaction of thorium(IV) nitrate with 2-[(4-phenyl-1H-1,2,3-triazol-1-yl)meth­yl]pyridine (L) yielded (LH)2[Th(NO3)6] or (C14H13N4)2[Th(NO3)6] (1), instead of the expected mixed-ligand complex [Th(NO3)4L2], which was detected in the mass spectrum of 1. In the structure, the [Th(NO3)6]2− anions display an icosa­hedral coordination geometry and are connected by LH+ cations through C—H⋯O hydrogen bonds. The LH+ cations inter­act via N—H⋯N hydrogen bonds. Hirshfeld surface analysis indicates that the most important inter­actions are O⋯H/H⋯O hydrogen-bonding inter­actions, which represent a 55.2% contribution.

硝酸钍(IV)与 2-[(4-苯基-1H-1,2,3-三唑-1-基)甲基]吡啶(L)反应生成 (LH)2[Th(NO3)6] 或 (C14H13N4)2[Th(NO3)6] (1),而不是预期的混合配体复合物 [Th(NO3)4 L 2],后者在 1 的质谱中被检测到。在该结构中,[Th(NO3)6]2- 阴离子呈二十面体配位几何形状,并通过 C-H⋯O 氢键与 LH+ 阳离子相连。LH+ 阳离子通过 N-H⋯N 氢键相互影响。Hirshfeld 表面分析表明,最重要的相互作用是 O⋯H/H⋯O 氢键相互作用,占 55.2%。
{"title":"Synthesis, structural studies and Hirshfeld surface analysis of 2-[(4-phenyl-1H-1,2,3-triazol-1-yl)methyl]pyridin-1-ium hexa­kis­(nitrato-κ2O,O′)thorate(IV)","authors":"Shalini Rangarajan ,&nbsp;Sonu Sheokand ,&nbsp;Victoria L. Blair ,&nbsp;Glen B. Deacon ,&nbsp;Maravanji S. Balakrishna","doi":"10.1107/S2056989024006352","DOIUrl":"10.1107/S2056989024006352","url":null,"abstract":"<div><p>The complex 2-[(4-phenyl-1<em>H</em>-1,2,3-triazol-1-yl)meth­yl]pyridin-1-ium hexa­kis­(nitrato-<em>O</em>,<em>O</em>′)thorate was synthesized from layered solutions of Th(NO<sub>3</sub>)<sub>4</sub>·5H<sub>2</sub>O and 2-[(4-phenyl-1<em>H</em>-1,2,3-triazol-1-yl)meth­yl]pyridine (<em>L</em>).</p></div><div><p>Reaction of thorium(IV) nitrate with 2-[(4-phenyl-1<em>H</em>-1,2,3-triazol-1-yl)meth­yl]pyridine (<em>L</em>) yielded (<em>L</em>H)<sub>2</sub>[Th(NO<sub>3</sub>)<sub>6</sub>] or (C<sub>14</sub>H<sub>13</sub>N<sub>4</sub>)<sub>2</sub>[Th(NO<sub>3</sub>)<sub>6</sub>] (<strong>1</strong>), instead of the expected mixed-ligand complex [Th(NO<sub>3</sub>)<sub>4</sub><em>L</em><sub>2</sub>], which was detected in the mass spectrum of <strong>1</strong>. In the structure, the [Th(NO<sub>3</sub>)<sub>6</sub>]<sup>2−</sup> anions display an icosa­hedral coordination geometry and are connected by <em>L</em>H<sup>+</sup> cations through C—H⋯O hydrogen bonds. The <em>L</em>H<sup>+</sup> cations inter­act <em>via</em> N—H⋯N hydrogen bonds. Hirshfeld surface analysis indicates that the most important inter­actions are O⋯H/H⋯O hydrogen-bonding inter­actions, which represent a 55.2% contribution.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 820-825"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11299750/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141896458","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal structure of bis­[(η5-tert-butyl­cyclo­pentadien­yl)tri­carbonyl­molybdenum(I)](Mo—Mo) 双-[(η5-叔丁基-环戊二烯基)三羰基-钼(I)](Mo-Mo)的晶体结构。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006959
Nigar Z. Ibrahimova , Dilgam B. Tagiyev , Iltifat U. Lyatifov , Mehmet Akkurt , Khudayar I. Hasanov , Ajaya Bhattarai

The Mo—Mo bond in the dinuclear mol­ecular title compound is 3.2323 (3) Å, in good agreement with related dinuclear molybdenum(I) compounds with cyclo­penta­dienyl (Cp) ligands.

The dinuclear mol­ecule of the title compound, [Mo2(C9H13)2(CO)6] or [Mo(tBuCp)(CO)3]2 where tBu and Cp are tert-butyl and cyclo­penta­dienyl, is centrosymmetric and is characterized by an Mo—Mo bond length of 3.2323 (3) Å. Imposed by inversion symmetry, the tBuCp and the carbonyl ligands are in a transoid arrangement to each other. In the crystal, inter­molecular C—H⋯O contacts lead to the formation of layers parallel to the bc plane.

标题化合物[Mo2(C9H13)2(CO)6]或[Mo( t BuCp)(CO)3]2(其中 t Bu 和 Cp 分别为叔丁基和环戊二烯基)的双核分子是中心对称的,其特征是 Mo-Mo 键长度为 3.2323 (3) Å。受反转对称性的影响,t BuCp 和羰基配体彼此呈横轴排列。在晶体中,分子间的 C-H⋯O 接触导致形成平行于 bc 平面的层。
{"title":"Crystal structure of bis­[(η5-tert-butyl­cyclo­pentadien­yl)tri­carbonyl­molybdenum(I)](Mo—Mo)","authors":"Nigar Z. Ibrahimova ,&nbsp;Dilgam B. Tagiyev ,&nbsp;Iltifat U. Lyatifov ,&nbsp;Mehmet Akkurt ,&nbsp;Khudayar I. Hasanov ,&nbsp;Ajaya Bhattarai","doi":"10.1107/S2056989024006959","DOIUrl":"10.1107/S2056989024006959","url":null,"abstract":"<div><p>The Mo—Mo bond in the dinuclear mol­ecular title compound is 3.2323 (3) Å, in good agreement with related dinuclear molybdenum(I) compounds with cyclo­penta­dienyl (Cp) ligands.</p></div><div><p>The dinuclear mol­ecule of the title compound, [Mo<sub>2</sub>(C<sub>9</sub>H<sub>13</sub>)<sub>2</sub>(CO)<sub>6</sub>] or [Mo(<sup>t</sup>BuCp)(CO)<sub>3</sub>]<sub>2</sub> where <sup>t</sup>Bu and Cp are <em>tert</em>-butyl and cyclo­penta­dienyl, is centrosymmetric and is characterized by an Mo—Mo bond length of 3.2323 (3) Å. Imposed by inversion symmetry, the <sup>t</sup>BuCp and the carbonyl ligands are in a <em>transoid</em> arrangement to each other. In the crystal, inter­molecular C—H⋯O contacts lead to the formation of layers parallel to the <em>bc</em> plane.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 882-885"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11299755/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141896452","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal and mol­ecular structure of 2-methyl-1,4-phenyl­ene bis­(3,5-di­bromo­benzoate) 2-甲基-1,4-亚苯基双(3,5-二溴苯甲酸酯)的晶体和分子结构
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006820
Nathan J. Weeks , Moira K. Lauer , Gary J. Balaich , Scott T. Iacono

Mol­ecules of the aryl diester, 2-methyl-1,4-phenyl­ene bis­(3,5-di­bromo­benzoate), crystallized out from the melt (m.p. = 502 K/DSC). The crystal structure consists of a C—H⋯Br hydrogen-bonded network and weaker, offset π–π inter­actions.

The aryl diester compound, 2-methyl-1,4-phenyl­ene bis­(3,5-di­bromo­benzoate), C21H12Br4O4, was synthesized by esterification of methyl hydro­quinone with 3,5-di­bromo­benzoic acid. A crystalline sample was obtained by cooling a sample of the melt (m.p. = 502 K/DSC) to room temperature. The mol­ecular structure consists of a central benzene ring with anti-3,5-di­bromo­benzoate groups symmetrically attached at the 1 and 4 positions and a methyl group attached at the 2 position of the central ring. In the crystal structure (space group P

), mol­ecules of the title aryl diester are located on inversion centers imposing disorder of the methyl group and H atom across the central benzene ring. The crystal structure is consolidated by a network of C—H⋯Br hydrogen bonds in addition to weaker and offset π–π inter­actions involving the central benzene rings as well as the rings of the attached 3,5-di­bromo­benzoate groups.

芳基二酯化合物 2-甲基-1,4-亚苯基双(3,5-二溴苯甲酸)C21H12Br4O4 是通过甲基对苯二酚与 3,5-二溴苯甲酸的酯化反应合成的。通过将熔体样品(m.p. = 502 K/DSC)冷却至室温,获得了结晶样品。其分子结构由一个中心苯环和对称连接在中心环 1 和 4 位置的反 3,5-二溴苯甲酸基团以及连接在中心环 2 位置的甲基组成。在晶体结构(空间群 Poverline{1})中,标题芳基二酯的分子位于反转中心,在整个中心苯环上形成了甲基和 H 原子的无序结构。除了涉及中心苯环以及相连的 3,5-二溴苯甲酸酯基团环的较弱和偏移的 π-π 相互作用外,C-H...Br 氢键网络也巩固了晶体结构。
{"title":"Crystal and mol­ecular structure of 2-methyl-1,4-phenyl­ene bis­(3,5-di­bromo­benzoate)","authors":"Nathan J. Weeks ,&nbsp;Moira K. Lauer ,&nbsp;Gary J. Balaich ,&nbsp;Scott T. Iacono","doi":"10.1107/S2056989024006820","DOIUrl":"10.1107/S2056989024006820","url":null,"abstract":"<div><p>Mol­ecules of the aryl diester, 2-methyl-1,4-phenyl­ene bis­(3,5-di­bromo­benzoate), crystallized out from the melt (m.p. = 502 K/DSC). The crystal structure consists of a C—H⋯Br hydrogen-bonded network and weaker, offset π–π inter­actions.</p></div><div><p>The aryl diester compound, 2-methyl-1,4-phenyl­ene bis­(3,5-di­bromo­benzoate), C<sub>21</sub>H<sub>12</sub>Br<sub>4</sub>O<sub>4</sub>, was synthesized by esterification of methyl hydro­quinone with 3,5-di­bromo­benzoic acid. A crystalline sample was obtained by cooling a sample of the melt (m.p. = 502 K/DSC) to room temperature. The mol­ecular structure consists of a central benzene ring with <em>anti</em>-3,5-di­bromo­benzoate groups symmetrically attached at the 1 and 4 positions and a methyl group attached at the 2 position of the central ring. In the crystal structure (space group <em>P</em><figure><img></figure>), mol­ecules of the title aryl diester are located on inversion centers imposing disorder of the methyl group and H atom across the central benzene ring. The crystal structure is consolidated by a network of C—H⋯Br hydrogen bonds in addition to weaker and offset π–π inter­actions involving the central benzene rings as well as the rings of the attached 3,5-di­bromo­benzoate groups.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 863-866"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141646681","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pyrazine-bridged polymetallic copper–iridium clusters 吡嗪桥接多金属铜铱簇合物
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024007151
Ben. J. Tickner , Richard Gammons , Adrian C. Whitwood , Simon B. Duckett

The title mol­ecule is centrosymmetric, with a pyrazine ligand bridging two {Cu10Ir3} cluster units that are arranged in an unusual shape containing 13 vertices, 22 faces, and 32 sides.

Single crystals of the mol­ecular compound, {Cu20Ir6Cl8(C21H24N2)6(C4H4N2)3]·3.18CH3OH or [({Cu10Ir3}Cl4(IMes)3(pyrazine))2(pyrazine)]·3.18CH3OH [where IMes is 1,3-bis­(2,4,6-trimethylphen­yl)imidazol-2-yl­idene], with a unique heterometallic cluster have been prepared and the structure revealed using single-crystal X-ray diffraction. The mol­ecule is centrosymmetric with two {Cu10Ir3} cores bridged by a pyrazine ligand. The polymetallic cluster contains three stabilizing N-heterocyclic carbenes, four Cl ligands, and a non-bridging pyrazine ligand. Notably, the Cu—Ir core is arranged in an unusual shape containing 13 vertices, 22 faces, and 32 sides. The atoms within the trideca­metallic cluster are arranged in four planes, with 2, 4, 4, 3 metals in each plane. Ir atoms are present in alternate planes with an Ir atom featuring in the peripheral bimetallic plane, and two Ir atoms featuring on opposite sides of the non-adjacent tetra­metallic plane. The crystal contains two disordered methanol solvent mol­ecules with an additional region of non-modelled electron density corrected for using the SQUEEZE routine in PLATON [Spek (2015#). Acta Cryst. C71, 9–18]. The given chemical formula and other crystal data do not take into account the unmodelled methanol solvent mol­ecule(s).

分子化合物{Cu20Ir6Cl8(C21H24N2)6(C4H4N2)3]-3.18CH3OH或[({Cu10Ir3}Cl4(IMes)3(吡嗪))2(吡嗪)]-3的单晶体。18CH3OH[其中 IMes 为 1,3-双(2,4,6-三甲基苯基)咪唑-2-亚基],并具有独特的杂金属簇。该分子是中心对称的,其两个{Cu10Ir3}核心由吡嗪配体桥接。多金属簇包含三个稳定的 N-杂环碳、四个 Cl 配体和一个非桥接吡嗪配体。值得注意的是,铜-铁内核的排列形状很特别,包含 13 个顶点、22 个面和 32 个边。三十面体金属簇内的原子排列在四个平面上,每个平面上分别有 2、4、4、3 种金属。铱原子交替出现在不同的平面上,一个铱原子位于双金属平面的外围,两个铱原子位于不相邻的四金属平面的两侧。晶体中含有两个无序的甲醇溶剂分子,还有一个使用 PLATON 中的 SQUEEZE 例程校正的非模拟电子密度区域[Spek (2015). Acta Cryst. C71, 9-18]。给出的化学式和其他晶体数据并未考虑未调制的甲醇溶剂分子。
{"title":"Pyrazine-bridged polymetallic copper–iridium clusters","authors":"Ben. J. Tickner ,&nbsp;Richard Gammons ,&nbsp;Adrian C. Whitwood ,&nbsp;Simon B. Duckett","doi":"10.1107/S2056989024007151","DOIUrl":"10.1107/S2056989024007151","url":null,"abstract":"<div><p>The title mol­ecule is centrosymmetric, with a pyrazine ligand bridging two {Cu<sub>10</sub>Ir<sub>3</sub>} cluster units that are arranged in an unusual shape containing 13 vertices, 22 faces, and 32 sides.</p></div><div><p>Single crystals of the mol­ecular compound, {Cu<sub>20</sub>Ir<sub>6</sub>Cl<sub>8</sub>(C<sub>21</sub>H<sub>24</sub>N<sub>2</sub>)<sub>6</sub>(C<sub>4</sub>H<sub>4</sub>N<sub>2</sub>)<sub>3</sub>]·3.18CH<sub>3</sub>OH or [({Cu<sub>10</sub>Ir<sub>3</sub>}Cl<sub>4</sub>(IMes)<sub>3</sub>(pyrazine))<sub>2</sub>(pyrazine)]·3.18CH<sub>3</sub>OH [where IMes is 1,3-bis­(2,4,6-trimethylphen­yl)imidazol-2-yl­idene], with a unique heterometallic cluster have been prepared and the structure revealed using single-crystal X-ray diffraction. The mol­ecule is centrosymmetric with two {Cu<sub>10</sub>Ir<sub>3</sub>} cores bridged by a pyrazine ligand. The polymetallic cluster contains three stabilizing <em>N</em>-heterocyclic carbenes, four Cl ligands, and a non-bridging pyrazine ligand. Notably, the Cu—Ir core is arranged in an unusual shape containing 13 vertices, 22 faces, and 32 sides. The atoms within the trideca­metallic cluster are arranged in four planes, with 2, 4, 4, 3 metals in each plane. Ir atoms are present in alternate planes with an Ir atom featuring in the peripheral bimetallic plane, and two Ir atoms featuring on opposite sides of the non-adjacent tetra­metallic plane. The crystal contains two disordered methanol solvent mol­ecules with an additional region of non-modelled electron density corrected for using the SQUEEZE routine in <em>PLATON</em> [Spek (2015<span><span>#</span></span>). <em>Acta Cryst.</em> C<strong>71</strong>, 9–18]. The given chemical formula and other crystal data do not take into account the unmodelled methanol solvent mol­ecule(s).</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 890-893"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141797390","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, mol­ecular and crystal structures of 4-amino-3,5-di­fluoro­benzo­nitrile, ethyl 4-amino-3,5-di­fluoro­benzoate, and diethyl 4,4′-(diazene-1,2-di­yl)bis­(3,5-di­fluoro­benzoate) 4-氨基-3,5-二氟苯甲腈、4-氨基-3,5-二氟苯甲酸乙酯和 4,4'-(二氮烯-1,2-二基)双-(3,5-二氟苯甲酸)二乙酯的合成、分子结构和晶体结构。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006819
Egor M. Novikov , Jesus Guillen Campos , Javier Read de Alaniz , Marina S. Fonari , Tatiana V. Timofeeva

Two inter­mediates, 4-amino-3,5-di­fluoro­benzo­nitrile, C7H4F2N2 (I), and ethyl 4-amino-3,5-di­fluoro­benzoate, C9H9F2NO2 (II), along with a visible-light-responsive azo­benzene derivative, diethyl 4,4′-(diazene-1,2-di­yl)bis­(3,5-di­fluoro­benzoate), C18H14F4N2O4 (III), obtained by four-step synthetic procedure, were studied using single-crystal X-ray diffraction. In the crystals of I and II, the mol­ecules are connected by N—H⋯N, N—H⋯F and N—H⋯O hydrogen bonds, C—H⋯F short contacts, and π-stacking inter­actions. In the crystal of III, only stacking inter­actions between the mol­ecules are found.

The crystal structures of two inter­mediates, 4-amino-3,5-di­fluoro­benzo­nitrile, C7H4F2N2 (I), and ethyl 4-amino-3,5-di­fluoro­benzoate, C9H9F2NO2 (II), along with a visible-light-responsive azo­benzene derivative, diethyl 4,4′-(diazene-1,2-di­yl)bis­(3,5-di­fluoro­benzoate), C18H14F4N2O4 (III), obtained by four-step synthetic procedure, were studied using single-crystal X-ray diffraction. The mol­ecules of I and II demonstrate the quinoid character of phenyl rings accompanied by the distortion of bond angles related to the presence of fluorine substituents in the 3 and 5 (ortho) positions. In the crystals of I and II, the mol­ecules are connected by N—H⋯N, N—H⋯F and N—H⋯O hydrogen bonds, C—H⋯F short contacts, and π-stacking inter­actions. In crystal of III, only stacking inter­actions between the mol­ecules are found.

4-amino-3,5-di-fluoro-benzo-nitrile, C7H4F2N2 (I)和 4-amino-3,5-di-fluoro-benzoate, C9H9F2NO2 (II)这两种中间体的晶体结构,以及一种可见光响应的偶氮苯衍生物、用单晶 X 射线衍射法研究了通过四步合成法获得的 4,4'-(重氮-1,2-二基)双(3,5-二氟苯甲酸)二乙酯 C18H14F4N2O4(III)。I 和 II 的分子结构显示出苯基环的喹啉特征,同时伴有与 3 和 5(正交)位上存在的氟取代基有关的键角变形。在 I 和 II 晶体中,分子结构通过 N-H⋯N、N-H⋯F 和 N-H⋯O 氢键、C-H⋯F 短接触和 π 堆积相互作用连接。在 III 晶体中,只发现了分子结构之间的堆叠相互作用。
{"title":"Synthesis, mol­ecular and crystal structures of 4-amino-3,5-di­fluoro­benzo­nitrile, ethyl 4-amino-3,5-di­fluoro­benzoate, and diethyl 4,4′-(diazene-1,2-di­yl)bis­(3,5-di­fluoro­benzoate)","authors":"Egor M. Novikov ,&nbsp;Jesus Guillen Campos ,&nbsp;Javier Read de Alaniz ,&nbsp;Marina S. Fonari ,&nbsp;Tatiana V. Timofeeva","doi":"10.1107/S2056989024006819","DOIUrl":"10.1107/S2056989024006819","url":null,"abstract":"<div><p>Two inter­mediates, 4-amino-3,5-di­fluoro­benzo­nitrile, C<sub>7</sub>H<sub>4</sub>F<sub>2</sub>N<sub>2</sub> (<strong>I</strong>), and ethyl 4-amino-3,5-di­fluoro­benzoate, C<sub>9</sub>H<sub>9</sub>F<sub>2</sub>NO<sub>2</sub> (<strong>II</strong>), along with a visible-light-responsive azo­benzene derivative, diethyl 4,4′-(diazene-1,2-di­yl)bis­(3,5-di­fluoro­benzoate), C<sub>18</sub>H<sub>14</sub>F<sub>4</sub>N<sub>2</sub>O<sub>4</sub> (<strong>III</strong>), obtained by four-step synthetic procedure, were studied using single-crystal X-ray diffraction. In the crystals of <strong>I</strong> and <strong>II</strong>, the mol­ecules are connected by N—H⋯N, N—H⋯F and N—H⋯O hydrogen bonds, C—H⋯F short contacts, and π-stacking inter­actions. In the crystal of <strong>III</strong>, only stacking inter­actions between the mol­ecules are found.</p></div><div><p>The crystal structures of two inter­mediates, 4-amino-3,5-di­fluoro­benzo­nitrile, C<sub>7</sub>H<sub>4</sub>F<sub>2</sub>N<sub>2</sub> (<strong>I</strong>), and ethyl 4-amino-3,5-di­fluoro­benzoate, C<sub>9</sub>H<sub>9</sub>F<sub>2</sub>NO<sub>2</sub> (<strong>II</strong>), along with a visible-light-responsive azo­benzene derivative, diethyl 4,4′-(diazene-1,2-di­yl)bis­(3,5-di­fluoro­benzoate), C<sub>18</sub>H<sub>14</sub>F<sub>4</sub>N<sub>2</sub>O<sub>4</sub> (<strong>III</strong>), obtained by four-step synthetic procedure, were studied using single-crystal X-ray diffraction. The mol­ecules of <strong>I</strong> and <strong>II</strong> demonstrate the quinoid character of phenyl rings accompanied by the distortion of bond angles related to the presence of fluorine substituents in the 3 and 5 (<em>ortho</em>) positions. In the crystals of <strong>I</strong> and <strong>II</strong>, the mol­ecules are connected by N—H⋯N, N—H⋯F and N—H⋯O hydrogen bonds, C—H⋯F short contacts, and π-stacking inter­actions. In crystal of <strong>III</strong>, only stacking inter­actions between the mol­ecules are found.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 867-872"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11299740/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141896457","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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Acta Crystallographica Section E: Crystallographic Communications
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