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Crystal structure, Hirshfeld surface analysis, DFT and the mol­ecular docking studies of 3-(2-chloro­acet­yl)-2,4,6,8-tetra­phenyl-3,7-di­azabicyclo­[3.3.1]nonan-9-one 3-(2-氯乙酰基)-2,4,6,8-四苯基-3,7-二氮杂双环[3.3.1]壬烷-9-酮的晶体结构、Hirshfeld 表面分析、DFT 和分子对接研究
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024008302
Sivagnanam Divyabharathi , Anjalai Ramachandran Karthiga , Rajans Reshwen Shalo , Krishnan Rajeswari , Thankakan Vidhyasagar , Sivashanmugam Selvanayagam

In the bicyclic title compound, C33H29ClN2O2, the two piperidine rings of the di­aza­bicylco moiety adopt distorted-chair conformations.

In the title compound, C33H29ClN2O2, the two piperidine rings of the di­aza­bicyclo moiety adopt distorted-chair conformations. Inter­molecular C—H⋯π inter­actions are mainly responsible for the crystal packing. The inter­molecular inter­actions were qu­anti­fied and analysed using Hirshfeld surface analysis, revealing that H⋯H inter­actions contribute most to the crystal packing (52.3%). The mol­ecular structure was further optimized by density functional theory (DFT) at the B3LYP/6–31 G(d,p) level and is compared with the experimentally determined mol­ecular structure in the solid state.

在双环标题化合物 C33H29ClN2O2 中,二氮杂双环分子的两个哌啶环呈扭曲的椅子构象。分子间的 C-H⋯π 相互作用是晶体堆积的主要原因。利用 Hirshfeld 表面分析法对分子间相互作用进行了量化和分析,结果表明 H⋯H 相互作用对晶体堆积的影响最大(52.3%)。通过密度泛函理论(DFT)在 B3LYP/6-31 G(d,p) 水平上进一步优化了分子结构,并与实验测定的固态分子结构进行了比较。
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引用次数: 0
Crystal structures of seven mixed-valence gold compounds of the form [(R1R2R3PE)2AuI]+[AuIIIX4]− (R = tert-butyl or isopropyl, E = S or Se, and X = Cl or Br) 七种形式为[(R 1 R 2 R 3PE)2AuI]+[AuIII X 4]-(R = 叔丁基或异丙基,E = S 或 Se,X = Cl 或 Br)的混合电价金化合物的晶体结构。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024009095
Daniel Upmann , Dirk Bockfeld , Peter G. Jones , Eliza Târcoveanu
<div><div>The ligands at the Au<sup>I</sup> atoms are anti­periplanar to each other across the S⋯S vectors. Residues are linked by various contacts of the types C—H⋯<em>X</em>, <em>E</em>⋯<em>X</em> and Br⋯Br.</div></div><div><div>During our studies of the oxidation of gold(I) complexes of tri­alkyl­phosphane chalcogenides, general formula <em>R</em><sup>1</sup><em>R</em><sup>2</sup><em>R</em><sup>3</sup>P<em>E</em>Au<em>X</em>, (<em>R</em> = <em>tert</em>-butyl or isopropyl, <em>E</em> = S or Se, <em>X</em> = Cl or Br) with PhICl<sub>2</sub> or elemental bromine, we have isolated a set of seven mixed-valence by-products, the bis­(tri­alkyl­phosphane chalcogenido)gold(I) tetra­halogenidoaurates(III) [(<em>R</em><sup>1</sup><em>R</em><sup>2</sup><em>R</em><sup>3</sup>P<em>E</em>)<sub>2</sub>Au]<sup>+</sup>[Au<em>X</em><sub>4</sub>]<sup>−</sup>. These corres­pond to the addition of one halogen atom per gold atom of the Au<sup>I</sup> precursor. Com­pound <strong>1</strong>, bis­(triiso­propyl­phosphane sulfide)­gold(I) tetra­chlorido­aur­ate(III), [Au(C<sub>9</sub>H<sub>21</sub>PS)<sub>2</sub>][AuCl<sub>4</sub>] or [(<sup>i</sup>Pr<sub>3</sub>PS)<sub>2</sub>Au][AuCl<sub>4</sub>], crystallizes in space group <em>P</em>2<sub>1</sub>/<em>n</em> with <em>Z</em> = 4; the gold(I) atoms of the two cations lie on twofold rotation axes, and the gold(III) atoms of the two anions lie on inversion centres. Compound <strong>2</strong>, bis­(<em>tert</em>-butyl­diiso­propyl­phosphane sulfide)­gold(I) tetra­chlorido­aurate(III), [Au(C<sub>10</sub>H<sub>23</sub>PS)<sub>2</sub>][AuCl<sub>4</sub>] or [(<sup>t</sup>Bu<sup>i</sup>Pr<sub>2</sub>PS)<sub>2</sub>Au][AuCl<sub>4</sub>], crystallizes in space group <em>P</em>1 with <em>Z</em> = 4; the asymmetric unit contains two cations and two anions with no imposed symmetry. A least-squares fit of the two cations gave an r.m.s. deviation of 0.19 Å. Compound <strong>3</strong>, bis­(tri-<em>tert</em>-butyl­phosphane sulfide)­gold(I) tetra­chlorido­aurate(III), [Au(C<sub>12</sub>H<sub>27</sub>PS)<sub>2</sub>][AuCl<sub>4</sub>] or [(<sup>t</sup>Bu<sub>3</sub>PS)<sub>2</sub>Au][AuCl<sub>4</sub>], crystallizes in space group <em>P</em>1 with <em>Z</em> = 1; both gold atoms lie on inversion centres. Compound <strong>4a</strong>, bis­(<em>tert</em>-butyl­diiso­propyl­phosphane sulfide)­gold(I) tetra­bromi­doaurate(III), [Au(C<sub>10</sub>H<sub>23</sub>PS)<sub>2</sub>][AuBr<sub>4</sub>] or [(<sup>t</sup>Bu<sup>i</sup>Pr<sub>2</sub>PS)<sub>2</sub>Au][AuBr<sub>4</sub>], crystallizes in space group <em>P</em>2<sub>1</sub>/<em>c</em> with <em>Z</em> = 4; the cation lies on a general position, whereas the gold(III) atoms of the two anions lie on inversion centres. Compound <strong>4b</strong>, bis­(<em>tert</em>-butyl­diiso­propyl­phosphane selenide)gold(I) tetra­bromido­aurate(III), [Au(C<sub>10</sub>H<sub>23</sub>PSe)<sub>2</sub>][AuBr<sub>4</sub>] or [(<sup>t</sup>Bu<sup>i</sup>Pr<sub>2</sub>PSe)<sub>2</sub>Au][AuBr<sub>4</sub>], i
在研究通式为 R 1 R 2 R 3PEAuX 的三烷基膦烷基瑀金(I)络合物(R = 叔丁基或异丙基,E = S 或 Se)与 PhICl2 或元素溴的氧化反应过程中,我们分离出了一组七种混合价副产物,即双(三烷基膦烷基瑀金)络合物、X = Cl 或 Br)与 PhICl2 或元素溴反应,我们分离出了一组七价混合副产物,即双(三烷基膦酰基)金(I)四卤代金酸盐(III)[(R 1 R 2 R 3PE)2Au]+[AuX 4]-。这与 AuI 前体中每个金原子添加一个卤原子有关。化合物 1,双(三异丙基硫化膦)-金(I)四氯化物-金酸酯(III),[Au(C9H21PS)2][AuCl4] 或 [( i Pr3PS)2Au][AuCl4] 结晶于空间群 P21/n,Z = 4;两个阳离子的金(I)原子位于两倍旋转轴上,两个阴离子的金(III)原子位于反转中心。化合物 2,即双(叔丁基-二异丙基-硫化膦)-金(I)四氯化物-牛磺酸(III),[Au(C10H23PS)2][AuCl4] 或 [( t Bu i Pr2PS)2Au][AuCl4] 结晶于空间群 P1,Z = 4;不对称单元包含两个阳离子和两个阴离子,没有外加对称性。两个阳离子的最小二乘法拟合得出的 r.m.s. 偏差为 0.19 Å。化合物 3,双(三叔丁基硫化膦)-金(I)四氯金酸(III),[Au(C12H27PS)2][AuCl4] 或 [( t Bu3PS)2Au][AuCl4] 结晶于空间群 P1,Z = 1;两个金原子都位于反转中心。化合物 4a,双(叔丁基-二异丙基-硫化膦)-金(I)四溴-月桂酸(III),[Au(C10H23PS)2][AuBr4] 或 [( t Bu i Pr2PS)2Au][AuBr4] 结晶于空间群 P21/c,Z = 4;阳离子位于一般位置,而两个阴离子的金(III)原子位于反转中心。化合物 4b,即双-(叔丁基-二异丙基-膦硒化物)金(I)四溴-牛磺酸盐(III),[Au(C10H23PSe)2][AuBr4] 或 [( t Bu i Pr2PSe)2Au][AuBr4] 与 4a 是同种异构体。化合物 5a,双-(三叔丁基硫化膦)-金(I)四溴-牛磺酸盐(III),[Au(C12H27PS)2][AuBr4] 或 [( t Bu3PS)2Au][AuBr4] 与化合物 4a 同型。化合物 5a,双-(三叔丁基硫化膦)-金(I)四溴-牛磺酸盐(III),[Au(C12H27PS)2][AuBr4] 或 [( t Bu3PS)2Au][AuBr4] 结晶于空间群 P1,Z = 1;两个金原子都位于反转中心。化合物 5b,即双(三叔丁基膦硒)金(I)四溴-牛磺酸盐(III),[Au(C12H27PSe)2][AuBr4] 或 [( t Bu3PSe)2Au][AuBr4] 与 5a 同型。所有 AuI 原子均为线性配位,所有 AuIII 原子均呈现方形平面配位环境。AuI 原子上的配体在 S⋯S 轴上相互反全平面。分子内存在一些短的 H⋯Au 和 H⋯E 接触。平均键长(埃)为P-S = 2.0322,P-Se = 2.1933,S-Au = 2.2915,Se-Au = 2.4037。1 的复杂三维堆积涉及两个短的 C-Hmethine⋯Cl 接触(以及一些稍长的接触)。就 2 而言,四个 C-Hmethine⋯Cl 相互作用产生了平行于 c 轴的 "之 "字形残基链。此外,还可以观察到一个 S⋯Cl 接触点,该接触点可被称为 "缩醛键"。3 的堆积是三维的,但可以分解成两层结构,每层结构都涉及一个 S⋯Cl 接触点和一个 H⋯Cl 接触点。对于溴化衍生物 4a/b 和 5a/b,阴离子的松散结合构成了堆积模式的一部分。对于所有这四种化合物来说,它们都与 E⋯Br 触点结合在一起,形成平行于 ab 平面的层。
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Residues are linked by various contacts of the types C—H⋯&lt;em&gt;X&lt;/em&gt;, &lt;em&gt;E&lt;/em&gt;⋯&lt;em&gt;X&lt;/em&gt; and Br⋯Br.&lt;/div&gt;&lt;/div&gt;&lt;div&gt;&lt;div&gt;During our studies of the oxidation of gold(I) complexes of tri­alkyl­phosphane chalcogenides, general formula &lt;em&gt;R&lt;/em&gt;&lt;sup&gt;1&lt;/sup&gt;&lt;em&gt;R&lt;/em&gt;&lt;sup&gt;2&lt;/sup&gt;&lt;em&gt;R&lt;/em&gt;&lt;sup&gt;3&lt;/sup&gt;P&lt;em&gt;E&lt;/em&gt;Au&lt;em&gt;X&lt;/em&gt;, (&lt;em&gt;R&lt;/em&gt; = &lt;em&gt;tert&lt;/em&gt;-butyl or isopropyl, &lt;em&gt;E&lt;/em&gt; = S or Se, &lt;em&gt;X&lt;/em&gt; = Cl or Br) with PhICl&lt;sub&gt;2&lt;/sub&gt; or elemental bromine, we have isolated a set of seven mixed-valence by-products, the bis­(tri­alkyl­phosphane chalcogenido)gold(I) tetra­halogenidoaurates(III) [(&lt;em&gt;R&lt;/em&gt;&lt;sup&gt;1&lt;/sup&gt;&lt;em&gt;R&lt;/em&gt;&lt;sup&gt;2&lt;/sup&gt;&lt;em&gt;R&lt;/em&gt;&lt;sup&gt;3&lt;/sup&gt;P&lt;em&gt;E&lt;/em&gt;)&lt;sub&gt;2&lt;/sub&gt;Au]&lt;sup&gt;+&lt;/sup&gt;[Au&lt;em&gt;X&lt;/em&gt;&lt;sub&gt;4&lt;/sub&gt;]&lt;sup&gt;−&lt;/sup&gt;. These corres­pond to the addition of one halogen atom per gold atom of the Au&lt;sup&gt;I&lt;/sup&gt; precursor. Com­pound &lt;strong&gt;1&lt;/strong&gt;, bis­(triiso­propyl­phosphane sulfide)­gold(I) tetra­chlorido­aur­ate(III), [Au(C&lt;sub&gt;9&lt;/sub&gt;H&lt;sub&gt;21&lt;/sub&gt;PS)&lt;sub&gt;2&lt;/sub&gt;][AuCl&lt;sub&gt;4&lt;/sub&gt;] or [(&lt;sup&gt;i&lt;/sup&gt;Pr&lt;sub&gt;3&lt;/sub&gt;PS)&lt;sub&gt;2&lt;/sub&gt;Au][AuCl&lt;sub&gt;4&lt;/sub&gt;], crystallizes in space group &lt;em&gt;P&lt;/em&gt;2&lt;sub&gt;1&lt;/sub&gt;/&lt;em&gt;n&lt;/em&gt; with &lt;em&gt;Z&lt;/em&gt; = 4; the gold(I) atoms of the two cations lie on twofold rotation axes, and the gold(III) atoms of the two anions lie on inversion centres. Compound &lt;strong&gt;2&lt;/strong&gt;, bis­(&lt;em&gt;tert&lt;/em&gt;-butyl­diiso­propyl­phosphane sulfide)­gold(I) tetra­chlorido­aurate(III), [Au(C&lt;sub&gt;10&lt;/sub&gt;H&lt;sub&gt;23&lt;/sub&gt;PS)&lt;sub&gt;2&lt;/sub&gt;][AuCl&lt;sub&gt;4&lt;/sub&gt;] or [(&lt;sup&gt;t&lt;/sup&gt;Bu&lt;sup&gt;i&lt;/sup&gt;Pr&lt;sub&gt;2&lt;/sub&gt;PS)&lt;sub&gt;2&lt;/sub&gt;Au][AuCl&lt;sub&gt;4&lt;/sub&gt;], crystallizes in space group &lt;em&gt;P&lt;/em&gt;1 with &lt;em&gt;Z&lt;/em&gt; = 4; the asymmetric unit contains two cations and two anions with no imposed symmetry. A least-squares fit of the two cations gave an r.m.s. deviation of 0.19 Å. Compound &lt;strong&gt;3&lt;/strong&gt;, bis­(tri-&lt;em&gt;tert&lt;/em&gt;-butyl­phosphane sulfide)­gold(I) tetra­chlorido­aurate(III), [Au(C&lt;sub&gt;12&lt;/sub&gt;H&lt;sub&gt;27&lt;/sub&gt;PS)&lt;sub&gt;2&lt;/sub&gt;][AuCl&lt;sub&gt;4&lt;/sub&gt;] or [(&lt;sup&gt;t&lt;/sup&gt;Bu&lt;sub&gt;3&lt;/sub&gt;PS)&lt;sub&gt;2&lt;/sub&gt;Au][AuCl&lt;sub&gt;4&lt;/sub&gt;], crystallizes in space group &lt;em&gt;P&lt;/em&gt;1 with &lt;em&gt;Z&lt;/em&gt; = 1; both gold atoms lie on inversion centres. Compound &lt;strong&gt;4a&lt;/strong&gt;, bis­(&lt;em&gt;tert&lt;/em&gt;-butyl­diiso­propyl­phosphane sulfide)­gold(I) tetra­bromi­doaurate(III), [Au(C&lt;sub&gt;10&lt;/sub&gt;H&lt;sub&gt;23&lt;/sub&gt;PS)&lt;sub&gt;2&lt;/sub&gt;][AuBr&lt;sub&gt;4&lt;/sub&gt;] or [(&lt;sup&gt;t&lt;/sup&gt;Bu&lt;sup&gt;i&lt;/sup&gt;Pr&lt;sub&gt;2&lt;/sub&gt;PS)&lt;sub&gt;2&lt;/sub&gt;Au][AuBr&lt;sub&gt;4&lt;/sub&gt;], crystallizes in space group &lt;em&gt;P&lt;/em&gt;2&lt;sub&gt;1&lt;/sub&gt;/&lt;em&gt;c&lt;/em&gt; with &lt;em&gt;Z&lt;/em&gt; = 4; the cation lies on a general position, whereas the gold(III) atoms of the two anions lie on inversion centres. Compound &lt;strong&gt;4b&lt;/strong&gt;, bis­(&lt;em&gt;tert&lt;/em&gt;-butyl­diiso­propyl­phosphane selenide)gold(I) tetra­bromido­aurate(III), [Au(C&lt;sub&gt;10&lt;/sub&gt;H&lt;sub&gt;23&lt;/sub&gt;PSe)&lt;sub&gt;2&lt;/sub&gt;][AuBr&lt;sub&gt;4&lt;/sub&gt;] or [(&lt;sup&gt;t&lt;/sup&gt;Bu&lt;sup&gt;i&lt;/sup&gt;Pr&lt;sub&gt;2&lt;/sub&gt;PSe)&lt;sub&gt;2&lt;/sub&gt;Au][AuBr&lt;sub&gt;4&lt;/sub&gt;], i","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 10","pages":"Pages 1087-1096"},"PeriodicalIF":0.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11451493/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142379775","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal structure, Hirshfeld surface analysis, and calculations of inter­molecular inter­action energies and energy frameworks of 1-[(1-hexyl-1H-1,2,3-triazol-4-yl)meth­yl]-3-(1-methyl­ethen­yl)-benzimidazol-2-one 1-[(1-hexyl-1H-1,2,3-triazol-4-yl)meth-yl]-3-(1-methyl-ethen-yl)-benzimidazol-2-one 的晶体结构、Hirshfeld 表面分析以及分子间作用能和能量框架计算。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024008703
Zakaria El Atrassi , Zakaria Benzekri , Olivier Blacque , Tuncer Hökelek , Ahmed Mazzah , Hassan Cherkaoui , Nada Kheira Sebbar
In the title mol­ecule, the benzimidazole moiety is oriented almost perpendicular to the triazole ring. In the crystal, C—H⋯O hydrogen bonds link the mol­ecules into a network structure.
The benzimidazole moiety in the title mol­ecule, C19H25N5O, is almost planar and oriented nearly perpendicular to the triazole ring. In the crystal, C—H⋯O hydrogen bonds link the mol­ecules into a network structure. There are no π–π inter­actions present but two weak C—H⋯π(ring) inter­actions are observed. A Hirshfeld surface analysis of the crystal structure indicates that the most important contributions for the crystal packing are from H⋯H (62.0%), H⋯C/C⋯H (16.1%), H⋯N/N⋯H (13.7%) and H⋯O/O⋯H (7.5%) inter­actions. Evaluation of the electrostatic, dispersion and total energy frameworks indicate that the stabilization is dominated via the dispersion energy contributions in the title compound.
标题分子分子 C19H25N5O 中的苯并咪唑分子几乎是平面的,方向几乎垂直于三唑环。在晶体中,C-H⋯O 氢键将分子结构连接成网络结构。晶体中没有 π-π 相互作用,但有两个微弱的 C-H⋯π(环)相互作用。对晶体结构的 Hirshfeld 表面分析表明,对晶体堆积最重要的贡献来自 H⋯H (62.0%)、H⋯C/C⋯H (16.1%)、H⋯N/N⋯H (13.7%)和 H⋯O/O⋯H (7.5%)相互作用。对静电、分散和总能量框架的评估表明,标题化合物中的稳定作用主要来自于分散能量的贡献。
{"title":"Crystal structure, Hirshfeld surface analysis, and calculations of inter­molecular inter­action energies and energy frameworks of 1-[(1-hexyl-1H-1,2,3-triazol-4-yl)meth­yl]-3-(1-methyl­ethen­yl)-benzimidazol-2-one","authors":"Zakaria El Atrassi ,&nbsp;Zakaria Benzekri ,&nbsp;Olivier Blacque ,&nbsp;Tuncer Hökelek ,&nbsp;Ahmed Mazzah ,&nbsp;Hassan Cherkaoui ,&nbsp;Nada Kheira Sebbar","doi":"10.1107/S2056989024008703","DOIUrl":"10.1107/S2056989024008703","url":null,"abstract":"<div><div>In the title mol­ecule, the benzimidazole moiety is oriented almost perpendicular to the triazole ring. In the crystal, C—H⋯O hydrogen bonds link the mol­ecules into a network structure.</div></div><div><div>The benzimidazole moiety in the title mol­ecule, C<sub>19</sub>H<sub>25</sub>N<sub>5</sub>O, is almost planar and oriented nearly perpendicular to the triazole ring. In the crystal, C—H⋯O hydrogen bonds link the mol­ecules into a network structure. There are no π–π inter­actions present but two weak C—H⋯π(ring) inter­actions are observed. A Hirshfeld surface analysis of the crystal structure indicates that the most important contributions for the crystal packing are from H⋯H (62.0%), H⋯C/C⋯H (16.1%), H⋯N/N⋯H (13.7%) and H⋯O/O⋯H (7.5%) inter­actions. Evaluation of the electrostatic, dispersion and total energy frameworks indicate that the stabilization is dominated <em>via</em> the dispersion energy contributions in the title compound.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 10","pages":"Pages 1075-1080"},"PeriodicalIF":0.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11451489/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142383291","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, crystal structure, and Hirshfeld surface analysis of 1,3-di­hydro-2H-benzimidazol-2-iminium 3-carb­oxy-4-hy­droxy­benzene­sulfonate 1,3-di-hydro-2H-benzimidazol-2-iminium 3-carb-oxy-4-hy-droxy-benzene-sulfonate 的合成、晶体结构和 Hirshfeld 表面分析。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024008557
Salmon Mukhammadiev , Sarvar Rajabov , Akmaljon Tojiboev , Jamshid Ashurov , Sardor Murodov , Shahlo Daminova
The asymmetric unit of the title salt comprises two 1,3-di­hydro-2H-benzimidazol-2-iminium cations and two 2-hy­droxy-5-sulfobenzoate anions (Z′ = 2). In the crystal, the mol­ecules inter­act through N—H⋯O, O—H⋯O hydrogen bonds and C—O⋯π contacts. The hydrogen-bonding inter­actions lead to the formation of layers parallel to (
01).
The asymmetric unit of the title salt, C7H8N3+·C7H5O6S, comprises two 1,3-di­hydro-2H-benzimidazol-2-iminium cations and two 2-hy­droxy-5-sulfobenzoate anions (Z′ = 2). In the crystal, the mol­ecules inter­act through N—H⋯O, O—H⋯O hydrogen bonds and C—O⋯π contacts. The hydrogen-bonding inter­actions lead to the formation of layers parallel to (
01). Hirshfeld surface analysis revealed that H⋯H contacts contribute to most of the crystal packing with 38.9%, followed by H⋯O contacts with 36.2%.
标题盐 C7H8N3 +-C7H5O6S- 的不对称单元包括两个 1,3-二氢-2H-苯并咪唑-2-亚铵盐阳离子和两个 2-羟基-5-磺酸基苯甲酸阴离子(Z' = 2)。在晶体中,分子结构通过 N-H⋯O、O-H⋯O 氢键和 C-O⋯π 接触相互作用。氢键相互作用导致形成平行于 (01) 的层。Hirshfeld 表面分析表明,H⋯H 接触占晶体堆积的大部分,达 38.9%,其次是 H⋯O 接触,占 36.2%。
{"title":"Synthesis, crystal structure, and Hirshfeld surface analysis of 1,3-di­hydro-2H-benzimidazol-2-iminium 3-carb­oxy-4-hy­droxy­benzene­sulfonate","authors":"Salmon Mukhammadiev ,&nbsp;Sarvar Rajabov ,&nbsp;Akmaljon Tojiboev ,&nbsp;Jamshid Ashurov ,&nbsp;Sardor Murodov ,&nbsp;Shahlo Daminova","doi":"10.1107/S2056989024008557","DOIUrl":"10.1107/S2056989024008557","url":null,"abstract":"<div><div>The asymmetric unit of the title salt comprises two 1,3-di­hydro-2<em>H</em>-benzimidazol-2-iminium cations and two 2-hy­droxy-5-sulfobenzoate anions (<em>Z</em>′ = 2). In the crystal, the mol­ecules inter­act through N—H⋯O, O—H⋯O hydrogen bonds and C—O⋯π contacts. The hydrogen-bonding inter­actions lead to the formation of layers parallel to (<blockquote><div><figure><img></figure></div></blockquote>01).</div></div><div><div>The asymmetric unit of the title salt, C<sub>7</sub>H<sub>8</sub>N<sub>3</sub><sup>+</sup>·C<sub>7</sub>H<sub>5</sub>O<sub>6</sub>S<sup>−</sup>, comprises two 1,3-di­hydro-2<em>H</em>-benzimidazol-2-iminium cations and two 2-hy­droxy-5-sulfobenzoate anions (<em>Z</em>′ = 2). In the crystal, the mol­ecules inter­act through N—H⋯O, O—H⋯O hydrogen bonds and C—O⋯π contacts. The hydrogen-bonding inter­actions lead to the formation of layers parallel to (<blockquote><div><figure><img></figure></div></blockquote>01). Hirshfeld surface analysis revealed that H⋯H contacts contribute to most of the crystal packing with 38.9%, followed by H⋯O contacts with 36.2%.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 10","pages":"Pages 999-1002"},"PeriodicalIF":0.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11451492/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142379875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, crystal structure and Hirshfeld surface of ethyl 2-[2-(methyl­sulfan­yl)-5-oxo-4,4-diphenyl-4,5-di­hydro-1H-imidazol-1-yl]acetate (thio­phenytoin derivative) 2-[2-(甲硫基)-5-氧代-4,4-二苯基-4,5-二氢-1H-咪唑-1-基]乙酸乙酯(硫苯妥英衍生物)的合成、晶体结构和 Hirshfeld 表面
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024007345
Abderrazzak El Moutaouakil Ala Allah , Benson M. Kariuki , Abdulsalam Alsubari , Ahlam I. Al-Sulami , Basmah H. Allehyani , Wafa O. Alsulami , Joel T. Mague , Youssef Ramli

The di­hydro­imidazole ring in the title mol­ecule is slightly distorted and the lone pair on the tri-coordinate nitro­gen atom is involved in intra-ring π bonding. In the crystal, C—H⋯O hydrogen bonds form inversion dimers, which are connected along the a- and c-axis directions by additional C—H⋯O hydrogen bonds, forming layers parallel to the ac plane.

The di­hydro­imidazole ring in the title mol­ecule, C20H20N2O3S, is slightly distorted and the lone pair on the tri-coordinate nitro­gen atom is involved in intra-ring π bonding. The methyl­sulfanyl substituent lies nearly in the plane of the five-membered ring while the ester substituent is rotated well out of that plane. In the crystal, C—H⋯O hydrogen bonds form inversion dimers, which are connected along the a- and c-axis directions by additional C—H⋯O hydrogen bonds, forming layers parallel to the ac plane. The major contributors to the Hirshfeld surface are C⋯H/H⋯C, O⋯H/H⋯O and S⋯H/H⋯S contacts at 20.5%, 14.7% and 4.9%, respectively.

标题分子 C20H20N2O3S 中的二氢咪唑环略微变形,三配位氮原子上的孤对参与了环内 π 键合。甲硫基取代基几乎位于五元环的平面内,而酯类取代基则在该平面外旋转。在晶体中,C-H......O 氢键形成反转二聚体,这些二聚体通过额外的 C-H...O 氢键沿 a 轴和 c 轴方向连接,形成平行于 ac 平面的层。Hirshfeld 表面的主要成分是 C...H/H...C、O...H/H...O 和 S...H/H...S 接触,分别占 20.5%、14.7% 和 4.9%。
{"title":"Synthesis, crystal structure and Hirshfeld surface of ethyl 2-[2-(methyl­sulfan­yl)-5-oxo-4,4-diphenyl-4,5-di­hydro-1H-imidazol-1-yl]acetate (thio­phenytoin derivative)","authors":"Abderrazzak El Moutaouakil Ala Allah ,&nbsp;Benson M. Kariuki ,&nbsp;Abdulsalam Alsubari ,&nbsp;Ahlam I. Al-Sulami ,&nbsp;Basmah H. Allehyani ,&nbsp;Wafa O. Alsulami ,&nbsp;Joel T. Mague ,&nbsp;Youssef Ramli","doi":"10.1107/S2056989024007345","DOIUrl":"10.1107/S2056989024007345","url":null,"abstract":"<div><p>The di­hydro­imidazole ring in the title mol­ecule is slightly distorted and the lone pair on the tri-coordinate nitro­gen atom is involved in intra-ring π bonding. In the crystal, C—H⋯O hydrogen bonds form inversion dimers, which are connected along the <em>a</em>- and <em>c-</em>axis directions by additional C—H⋯O hydrogen bonds, forming layers parallel to the <em>ac</em> plane.</p></div><div><p>The di­hydro­imidazole ring in the title mol­ecule, C<sub>20</sub>H<sub>20</sub>N<sub>2</sub>O<sub>3</sub>S, is slightly distorted and the lone pair on the tri-coordinate nitro­gen atom is involved in intra-ring π bonding. The methyl­sulfanyl substituent lies nearly in the plane of the five-membered ring while the ester substituent is rotated well out of that plane. In the crystal, C—H⋯O hydrogen bonds form inversion dimers, which are connected along the <em>a</em>- and <em>c-</em>axis directions by additional C—H⋯O hydrogen bonds, forming layers parallel to the <em>ac</em> plane. The major contributors to the Hirshfeld surface are C⋯H/H⋯C, O⋯H/H⋯O and S⋯H/H⋯S contacts at 20.5%, 14.7% and 4.9%, respectively.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 9","pages":"Pages 926-930"},"PeriodicalIF":0.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141922179","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal structure and Hirshfeld surface analysis of 1-[6-bromo-2-(3-bromo­phen­yl)-1,2,3,4-tetra­hydro­quinolin-4-yl]pyrrolidin-2-one 1-[6-溴-2-(3-溴苯基)-1,2,3,4-四氢喹啉-4-基]吡咯烷-2-酮的晶体结构和 Hirshfeld 表面分析
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024008144
Anastasia A. Pronina , Alexandra G. Kutasevich , Mikhail S. Grigoriev , Khudayar I. Hasanov , Nurlana D. Sadikhova , Tahir A. Javadzade , Mehmet Akkurt , Ajaya Bhattarai

In the crystal, mol­ecules are linked by inter­molecular N—H⋯O, C—H⋯O and C—H⋯Br hydrogen bonds, forming a three-dimensional network. In addition, pairs of mol­ecules along the c axis are connected by C—H⋯π inter­actions.

This study presents the synthesis, characterization and Hirshfeld surface analysis of 1-[6-bromo-2-(3-bromo­phen­yl)-1,2,3,4-tetra­hydro­quinolin-4-yl]pyrrolidin-2-one, C19H18Br2N2O. In the title compound, the pyrrolidine ring adopts a distorted envelope configuration. In the crystal, mol­ecules are linked by inter­molecular N—H⋯O, C—H⋯O and C—H⋯Br hydrogen bonds, forming a three-dimensional network. In addition, pairs of mol­ecules along the c axis are connected by C—H⋯π inter­actions. According to a Hirshfeld surface study, H⋯H (36.9%), Br⋯H/H⋯Br (28.2%) and C⋯H/H⋯C (24.3%) inter­actions are the most significant contributors to the crystal packing.

在晶体中,分子通过分子间的 N-H⋯O、C-H⋯O 和 C-H⋯Br 氢键相连,形成一个三维网络。本研究介绍了 1-[6-溴-2-(3-溴苯基)-1,2,3,4-四氢喹啉-4-基]吡咯烷-2-酮(C19H18Br2N2O)的合成、表征和 Hirshfeld 表面分析。在标题化合物中,吡咯烷环呈扭曲的包络构型。在晶体中,分子通过分子间的 N-H⋯O、C-H⋯O 和 C-H⋯Br 氢键相连,形成一个三维网络。此外,沿 c 轴的成对分子通过 C-H⋯π 相互作用连接在一起。根据 Hirshfeld 表面研究,H⋯H(36.9%)、Br⋯H/H⋯Br(28.2%)和 C⋯H/H⋯C(24.3%)相互作用是晶体堆积的最主要因素。
{"title":"Crystal structure and Hirshfeld surface analysis of 1-[6-bromo-2-(3-bromo­phen­yl)-1,2,3,4-tetra­hydro­quinolin-4-yl]pyrrolidin-2-one","authors":"Anastasia A. Pronina ,&nbsp;Alexandra G. Kutasevich ,&nbsp;Mikhail S. Grigoriev ,&nbsp;Khudayar I. Hasanov ,&nbsp;Nurlana D. Sadikhova ,&nbsp;Tahir A. Javadzade ,&nbsp;Mehmet Akkurt ,&nbsp;Ajaya Bhattarai","doi":"10.1107/S2056989024008144","DOIUrl":"10.1107/S2056989024008144","url":null,"abstract":"<div><p>In the crystal, mol­ecules are linked by inter­molecular N—H⋯O, C—H⋯O and C—H⋯Br hydrogen bonds, forming a three-dimensional network. In addition, pairs of mol­ecules along the <em>c</em> axis are connected by C—H⋯π inter­actions.</p></div><div><p>This study presents the synthesis, characterization and Hirshfeld surface analysis of 1-[6-bromo-2-(3-bromo­phen­yl)-1,2,3,4-tetra­hydro­quinolin-4-yl]pyrrolidin-2-one, C<sub>19</sub>H<sub>18</sub>Br<sub>2</sub>N<sub>2</sub>O. In the title compound, the pyrrolidine ring adopts a distorted envelope configuration. In the crystal, mol­ecules are linked by inter­molecular N—H⋯O, C—H⋯O and C—H⋯Br hydrogen bonds, forming a three-dimensional network. In addition, pairs of mol­ecules along the <em>c</em> axis are connected by C—H⋯π inter­actions. According to a Hirshfeld surface study, H⋯H (36.9%), Br⋯H/H⋯Br (28.2%) and C⋯H/H⋯C (24.3%) inter­actions are the most significant contributors to the crystal packing.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 9","pages":"Pages 967-972"},"PeriodicalIF":0.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142150489","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[SnF(bipy)(H2O)]2[SnF6], a mixed-valent inorganic tin(II)–tin(IV) compound [SnF(bipy)(H2O)]2[SnF6],一种混合价的无机锡(II)-锡(IV)化合物
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024007400
Natalia Röwekamp-Krugley , Hans Reuter

The title compound represents a ionic mixed-valent tin(II)–tin(IV) compound with the bivalent tin atom as central atom of the cation and the tetra­valent tin atom as central atom of the anion. Regarding the first and second coordination sphere, the bivalent tin atom is fourfold, seesaw and fivefold, trapezoid–pyramidal coordinated while the tetra­valent tin atom exhibits an octa­hedral coordination.

In the title compound, bis­[aqua­(2,2′-bi­pyridine)­fluorido­tin(II)] hexa­fluorido­tin(IV), [SnF(C10H8N2)(H2O)]2[SnF6], an ionic mixed-valent tin(II)–tin(IV) compound, the bivalent tin atom is the center atom of the cation and the tetra­valent tin atom is the center atom of the anion. With respect to the first coordination sphere, the cation is monomeric, with the tin(II) atom having a fourfold seesaw coordination with a fluorine atom in an equatorial position, a water mol­ecule in an axial position and the two nitro­gen atoms of the chelating 2,2′-bi­pyridine ligand in the remaining axial and equatorial positions. The bond lengths and angles of this hypervalent first coordination sphere are described by 2c–2e and 3c–4e bonds, respectively, all of which are based on the orthogonal 5p orbitals of the tin atom. In the second coordination sphere, which is based on an additional, very long tin–fluorine bond that leads to dimerization of the cation, the tin atom is trapezoidal–pyramidally coordinated. The tetra­valent tin atom of the centrosymmetric anion has an octa­hedral coordination. The differences in its tin–fluorine bond lengths are attributed to hydrogen bonding, as the two of the four fluorine atoms are each involved in two hydrogen bonds, linking anions and cations together to form strands.

标题化合物是一种离子型混合价锡(II)-锡(IV)化合物,阳离子的中心原子是二价锡原子,阴离子的中心原子是四价锡原子。在第一和第二配位圈中,二价锡原子呈四倍跷跷板和五倍梯形锥体配位,而四价锡原子则呈八面体配位。在标题化合物,双[水(2,2′-联吡啶)氟锡(II)]六氟锡(IV),[SnF(C10H8N2)(H2O)]2[SnF6],一种离子型混合价锡(II)-锡(IV)化合物中,二价锡原子是阳离子的中心原子,四价锡原子是阴离子的中心原子。在第一个配位层中,阳离子是单质,锡(II)原子与位于赤道位置的一个氟原子、位于轴向位置的一个水分子以及位于其余轴向和赤道位置的螯合 2,2′-联吡啶配体的两个氮原子形成四重跷跷板配位。这个高价第一配位层的键长和角度分别由 2c-2e 和 3c-4e 键来描述,所有这些键都基于锡原子的正交 5p 轨道。在第二个配位层中,锡原子是梯形配位的,该配位层基于一个额外的、导致阳离子二聚化的超长锡氟键。而中心对称阴离子的四价锡原子则呈八面体配位。其锡氟键长度的差异归因于氢键,因为四个氟原子中的两个分别参与了两个氢键,将阴离子和阳离子连接在一起形成链。
{"title":"[SnF(bipy)(H2O)]2[SnF6], a mixed-valent inorganic tin(II)–tin(IV) compound","authors":"Natalia Röwekamp-Krugley ,&nbsp;Hans Reuter","doi":"10.1107/S2056989024007400","DOIUrl":"10.1107/S2056989024007400","url":null,"abstract":"<div><p>The title compound represents a ionic mixed-valent tin(II)–tin(IV) compound with the bivalent tin atom as central atom of the cation and the tetra­valent tin atom as central atom of the anion. Regarding the first and second coordination sphere, the bivalent tin atom is fourfold, seesaw and fivefold, trapezoid–pyramidal coordinated while the tetra­valent tin atom exhibits an octa­hedral coordination.</p></div><div><p>In the title compound, bis­[aqua­(2,2′-bi­pyridine)­fluorido­tin(II)] hexa­fluorido­tin(IV), [SnF(C<sub>10</sub>H<sub>8</sub>N<sub>2</sub>)(H<sub>2</sub>O)]<sub>2</sub>[SnF<sub>6</sub>], an ionic mixed-valent tin(II)–tin(IV) compound, the bivalent tin atom is the center atom of the cation and the tetra­valent tin atom is the center atom of the anion. With respect to the first coordination sphere, the cation is monomeric, with the tin(II) atom having a fourfold seesaw coordination with a fluorine atom in an equatorial position, a water mol­ecule in an axial position and the two nitro­gen atoms of the chelating 2,2′-bi­pyridine ligand in the remaining axial and equatorial positions. The bond lengths and angles of this hypervalent first coordination sphere are described by 2<em>c</em>–2<em>e</em> and 3<em>c</em>–4<em>e</em> bonds, respectively, all of which are based on the orthogonal 5<em>p</em> orbitals of the tin atom. In the second coordination sphere, which is based on an additional, very long tin–fluorine bond that leads to dimerization of the cation, the tin atom is trapezoidal–pyramidally coordinated. The tetra­valent tin atom of the centrosymmetric anion has an octa­hedral coordination. The differences in its tin–fluorine bond lengths are attributed to hydrogen bonding, as the two of the four fluorine atoms are each involved in two hydrogen bonds, linking anions and cations together to form strands.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 9","pages":"Pages 921-925"},"PeriodicalIF":0.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142150082","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal structure and Hirshfeld surface analysis of di­chlorido­[2-(3-cyclo­pentyl-1,2,4-triazol-5-yl-κN4)pyridine-κN]palladium(II) di­methyl­formamide monosolvate 二氯[2-(3-环戊基-1,2,4-三唑-5-基-κN4)吡啶-κN]钯(II)二甲基甲酰胺单溶胶的晶体结构和希尔施菲尔德表面分析
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024007801
Viktoriya V. Dyakonenko , Dmytro M. Khomenko , Roman O. Doroshchuk , Ganna V. Ivanova , Rostyslav D. Lampeka

The crystal structure of mononuclear di­chlorido­palladium(II) complex with 2-(3-cyclo­pentyl-1,2,4-triazol-5-yl)pyridine is reported and discussed.

This study presents the synthesis, characterization and Hirshfeld surface analysis of the title mononuclear complex, [PdCl2(C12H14N4)]·C3H7NO. The compound crystalizes in the P21/c space group of the monoclinic system. The asymmetric unit contains one neutral complex Pd(HLc-Pe)Cl2 [HLc-Pe is 2-(3-cyclo­pentyl-1,2,4-triazol-5-yl)pyridine] and one mol­ecule of DMF as a solvate. The Pd atom has a square-planar coordination. In the crystal, mol­ecules are linked by inter­molecular N—H⋯O and C—H⋯N hydrogen bonds, forming layers parallel to the bc plane. A Hirshfeld surface analysis showed that the H⋯H contacts dominate the crystal packing with a contribution of 41.4%. The contribution of the N⋯H/H⋯N and H⋯O/O⋯H inter­actions is somewhat smaller, amounting to 12.4% and 5%, respectively.

本研究报道并讨论了 2-(3-环戊基-1,2,4-三唑-5-基)吡啶单核二氯化钯(II)配合物的晶体结构。本研究介绍了标题为[PdCl2(C12H14N4)]-C3H7NO 的单核配合物的合成、表征和 Hirshfeld 表面分析。该化合物在单斜系统的 P21/c 空间群中形成晶体。不对称单元包含一个中性络合物 Pd(HLc-Pe)Cl2 [HLc-Pe 是 2-(3-环戊基-1,2,4-三唑-5-基)吡啶]和一分子 DMF 溶剂。钯原子具有正方形配位。在晶体中,分子通过分子间 N-H⋯O 和 C-H⋯N 氢键相连,形成平行于 bc 平面的层。Hirshfeld 表面分析表明,H⋯H 接触在晶体堆积中占主导地位,占 41.4%。N⋯H/H⋯N和H⋯O/O⋯H相互作用的贡献略小,分别为12.4%和5%。
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引用次数: 0
Crystal structure and Hirshfeld surface analysis of (E)-N-(2-styrylphen­yl)benzene­sulfonamide (E)-N-(2-styrylphen-yl)benzene-sulfonamide 的晶体结构和 Hirshfeld 表面分析。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024008892
Dharani Albert A. M. , Achyuta Nagaraj , Kanagasabai Somarathinam , Pavunkumar Vinayagam , Mohanakrishnan Arasambattu K. , Gugan Kothandan
The crystal structure of the title compound C20H17NO2S features hydrogen-bonding and C—H⋯π. Docking studies show that it has a strong binding affinity with EGFR kinase, indicating its potential as a promising candidate for targeted lung cancer therapy.
The crystal structure of the title compound C20H17NO2S features hydrogen-bonding and C—H⋯π inter­actions. Hirshfeld surface analysis revealed that H⋯H, C⋯H/H⋯C and O⋯H/H⋯O inter­actions make a major contribution to the crystal packing. Docking studies were carried out to determine the binding affinity and inter­action profile of the title compound with EGFR kinase, a member of the ErbB family of receptor tyrosine kinases, which is crucial for processes such as cell proliferation and differentiation. The title compound shows a strong binding affinity with EGFR kinase, with the most favourable conformation having a binding energy of −8.27 kcal mol−1 and a predicted IC50 of 870.34 nM, indicating its potential as a promising candidate for targeted lung cancer therapy.
标题化合物 C20H17NO2S 的晶体结构以氢键和 C-H⋯π 相互作用为特征。Hirshfeld 表面分析表明,H⋯H、C⋯H/H⋯C 和 O⋯H/H⋯O 相互作用对晶体的堆积起了重要作用。为了确定标题化合物与表皮生长因子受体激酶(表皮生长因子受体激酶是 ErbB 受体酪氨酸激酶家族的成员,对细胞增殖和分化等过程至关重要)的结合亲和力和相互作用概况,我们进行了对接研究。标题化合物与表皮生长因子受体激酶有很强的结合亲和力,最有利构象的结合能为 -8.27 kcal mol-1,预测 IC50 为 870.34 nM,这表明它有望成为肺癌靶向治疗的候选药物。
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引用次数: 0
Synthesis, non-spherical structure refinement and Hirshfeld surface analysis of racemic 2,2′-diisobut­oxy-1,1′-bi­naphthalene 外消旋 2,2'-diisobut-oxy-1,1'-bi-naphthalene 的合成、非球形结构完善和 Hirshfeld 表面分析。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-09-01 DOI: 10.1107/S2056989024009101
Pénayori Marie-Aimée Coulibaly , Eric Ziki , Yvon Bibila Mayaya Bisseyou , Tchambaga Etienne Camara , Souleymane Coulibaly , Drissa Sissouma
The structure of the title 1–1′-binaphthyl derivative was refined with non-spherical atomic form factors computed using the DFT method at the PBE0/def2-TZVP basis set level.
In the racemic title compound, C28H30O2, the naphthyl ring systems subtend a dihedral angle of 68.59 (1)° and the mol­ecular conformation is consolidated by a pair of intra­molecular C—H⋯π contacts. The crystal packing features a weak C—H⋯π contact and van der Waals forces. A Hirshfeld surface analysis of the crystal structure reveals that the most significant contributions are from H⋯H (73.2%) and C⋯H/H⋯C (21.2%) contacts.
在外消旋标题化合物 C28H30O2 中,萘环系统的二面角为 68.59 (1)°,分子构象通过一对分子内 C-H⋯π 接触而得到巩固。晶体堆积的特点是弱的 C-H⋯π 接触和范德华力。对晶体结构进行的 Hirshfeld 表面分析表明,H⋯H(73.2%)和 C⋯H/H⋯C (21.2%)接触的贡献最大。
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引用次数: 0
期刊
Acta Crystallographica Section E: Crystallographic Communications
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