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Crystal structures of seven gold(III) complexes of the form LAuX3 (L = substituted pyridine, X = Cl or Br) LAuX 3(L = 取代的吡啶,X = Cl 或 Br)形式的七种金(III)配合物的晶体结构。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024007266
Cindy Döring , Peter G. Jones
<div><p>The structures of seven complexes of general formula <em>L</em>Au<em>X</em><sub>3</sub> (<em>L</em> = methyl­pyridines or di­methyl­pyridines, <em>X</em> = Cl or Br) are presented. In the crystal packing, a frequent feature is the offset-stacked and approximately rectangular dimeric moiety (Au—<em>X</em>)<sub>2</sub>, linked by Au⋯<em>X</em> contacts.</p></div><div><p>The structures of seven gold(III) halide derivatives of general formula <em>L</em>Au<em>X</em><sub>3</sub> (<em>L</em> = methyl­pyridines or di­methyl­pyridines, <em>X</em> = Cl or Br) are presented: tri­chlorido­(2-methyl­pyridine)­gold(III), [AuCl<sub>3</sub>(C<sub>6</sub>H<sub>7</sub>N)], <strong>1</strong> (as two polymorphs <strong>1a</strong> and <strong>1b</strong>); tri­bromido­(2-methyl­pyridine)­gold(III), [AuBr<sub>3</sub>(C<sub>6</sub>H<sub>7</sub>N)], <strong>2</strong>; tri­bromido­(3-methyl­pyridine)­gold(III), [AuBr<sub>3</sub>(C<sub>6</sub>H<sub>7</sub>N)], <strong>3</strong>; tri­bromido­(2,4-di­meth­yl­pyridine)­gold(III), [AuBr<sub>3</sub>(C<sub>7</sub>H<sub>9</sub>N)], <strong>4</strong>; tri­chlorido­(3,5-di­methylpyridine)­gold(III), [AuCl<sub>3</sub>(C<sub>7</sub>H<sub>9</sub>N)], <strong>5</strong>; tri­bromido­(3,5-di­methyl­pyridine)­gold(III), [AuBr<sub>3</sub>(C<sub>7</sub>H<sub>9</sub>N)], <strong>6</strong>, and tri­chlorido­(2,6-di­methyl­pyridine)­gold(III), [AuCl<sub>3</sub>(C<sub>7</sub>H<sub>9</sub>N)], <strong>7</strong>. Additionally, the structure of <strong>8</strong>, the 1:1 adduct of <strong>2</strong> and <strong>6</strong>, [AuBr<sub>3</sub>(C<sub>6</sub>H<sub>7</sub>N)]·[AuBr<sub>3</sub>(C<sub>7</sub>H<sub>9</sub>N)], is included. All the structures crystallize solvent-free, and all have <em>Z</em>′ = 1 except for <strong>5</strong> and <strong>7</strong>, which display crystallographic twofold rotation symmetry, and <strong>4</strong>, which has <em>Z</em>′ = 2. <strong>1a</strong> and <strong>2</strong> are isotypic. The coordination geometry at the gold(III) atoms is, as expected, square-planar. Four of the crystals (<strong>1a</strong>, <strong>1b</strong>, <strong>2</strong> and <strong>8</strong>) were non-merohedral twins, and these structures were refined using the ‘HKLF 5’ method. The largest inter­planar angles between the pyridine ring and the coordination plane are observed for those structures with a 2-methyl substituent of the pyridine ring. The Au—N bonds are consistently longer <em>trans</em> to Br (average 2.059 Å) than <em>trans</em> to Cl (average 2.036 Å). In the crystal packing, a frequent feature is the offset-stacked and approximately rectangular dimeric moiety (Au—<em>X</em>)<sub>2</sub>, with anti­parallel Au—<em>X</em> bonds linked by Au⋯<em>X</em> contacts at the vacant positions axial to the coordination plane. The dimers are connected by further secondary inter­actions (Au⋯<em>X</em> or <em>X</em>⋯<em>X</em> contacts, ‘weak’ C—H⋯<em>X</em> hydrogen bonds) to form chain, double chain (‘ladder’) or laye
本文介绍了通式为 LAuX 3(L = 甲基吡啶或二甲基吡啶,X = Cl 或 Br)的七种金(III)卤化物衍生物的结构:三氯-(2-甲基吡啶)-金(III),[AuCl3(C6H7N)],1(两种多晶型 1a 和 1b);三溴-(2-甲基吡啶)-金(III),[AuBr3(C6H7N)],2;三溴-(3-甲基吡啶)-金(III),[AuBr3(C6H7N)],3;三溴-(2,4-二甲基吡啶)-金(III),[AuBr3(C7H9N)],4; 三氯-(3,5-二甲基吡啶)-金(III),[AuCl3(C7H9N)],5;三溴-(3,5-二甲基吡啶)-金(III),[AuBr3(C7H9N)],6 以及三氯-(2,6-二甲基吡啶)-金(III),[AuCl3(C7H9N)],7。此外,还包括 8 的结构,即 2 和 6 的 1:1 加合物 [AuBr3(C6H7N)]-[AuBr3(C7H9N)]。所有结构都是无溶剂结晶,除了 5 和 7 显示结晶学上的二重旋转对称性,以及 4 显示 Z' = 2 外,其余结构的 Z' = 1。正如预期的那样,金(III)原子的配位几何为方形平面。其中四个晶体(1a、1b、2 和 8)是非正方孪晶,这些结构是用 "HKLF 5 "方法精制的。在吡啶环上有 2 个甲基取代基的结构中,吡啶环与配位面之间的平面间夹角最大。Au-N 键反式至 Br(平均 2.059 Å)的长度一直长于反式至 Cl(平均 2.036 Å)的长度。在晶体堆积中,一个常见的特征是偏移堆积和近似矩形的二聚分子 (Au-X)2,在配位平面轴向的空位上,反平行的 Au-X 键通过 Au⋯X 触点相连。二聚体通过进一步的次级相互作用(Au⋯X 或 X⋯X 接触、"弱 "C-H⋯X 氢键)连接起来,形成链状、双链状("阶梯")或层状结构,并在一些情况下在三维空间再次连接起来。只有 1b 和 7 不包含偏移二聚体;这些结构涉及 C-H⋯Cl 氢键与 Cl⋯Cl 接触(1b)或 Cl⋯π 接触(7)。我们还将涉及简单吡啶的其他七种 LAuX 3 复合物(取自剑桥结构数据库)的堆积模式与 1-8 进行了比较。
{"title":"Crystal structures of seven gold(III) complexes of the form LAuX3 (L = substituted pyridine, X = Cl or Br)","authors":"Cindy Döring ,&nbsp;Peter G. Jones","doi":"10.1107/S2056989024007266","DOIUrl":"10.1107/S2056989024007266","url":null,"abstract":"&lt;div&gt;&lt;p&gt;The structures of seven complexes of general formula &lt;em&gt;L&lt;/em&gt;Au&lt;em&gt;X&lt;/em&gt;&lt;sub&gt;3&lt;/sub&gt; (&lt;em&gt;L&lt;/em&gt; = methyl­pyridines or di­methyl­pyridines, &lt;em&gt;X&lt;/em&gt; = Cl or Br) are presented. In the crystal packing, a frequent feature is the offset-stacked and approximately rectangular dimeric moiety (Au—&lt;em&gt;X&lt;/em&gt;)&lt;sub&gt;2&lt;/sub&gt;, linked by Au⋯&lt;em&gt;X&lt;/em&gt; contacts.&lt;/p&gt;&lt;/div&gt;&lt;div&gt;&lt;p&gt;The structures of seven gold(III) halide derivatives of general formula &lt;em&gt;L&lt;/em&gt;Au&lt;em&gt;X&lt;/em&gt;&lt;sub&gt;3&lt;/sub&gt; (&lt;em&gt;L&lt;/em&gt; = methyl­pyridines or di­methyl­pyridines, &lt;em&gt;X&lt;/em&gt; = Cl or Br) are presented: tri­chlorido­(2-methyl­pyridine)­gold(III), [AuCl&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;6&lt;/sub&gt;H&lt;sub&gt;7&lt;/sub&gt;N)], &lt;strong&gt;1&lt;/strong&gt; (as two polymorphs &lt;strong&gt;1a&lt;/strong&gt; and &lt;strong&gt;1b&lt;/strong&gt;); tri­bromido­(2-methyl­pyridine)­gold(III), [AuBr&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;6&lt;/sub&gt;H&lt;sub&gt;7&lt;/sub&gt;N)], &lt;strong&gt;2&lt;/strong&gt;; tri­bromido­(3-methyl­pyridine)­gold(III), [AuBr&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;6&lt;/sub&gt;H&lt;sub&gt;7&lt;/sub&gt;N)], &lt;strong&gt;3&lt;/strong&gt;; tri­bromido­(2,4-di­meth­yl­pyridine)­gold(III), [AuBr&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;7&lt;/sub&gt;H&lt;sub&gt;9&lt;/sub&gt;N)], &lt;strong&gt;4&lt;/strong&gt;; tri­chlorido­(3,5-di­methylpyridine)­gold(III), [AuCl&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;7&lt;/sub&gt;H&lt;sub&gt;9&lt;/sub&gt;N)], &lt;strong&gt;5&lt;/strong&gt;; tri­bromido­(3,5-di­methyl­pyridine)­gold(III), [AuBr&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;7&lt;/sub&gt;H&lt;sub&gt;9&lt;/sub&gt;N)], &lt;strong&gt;6&lt;/strong&gt;, and tri­chlorido­(2,6-di­methyl­pyridine)­gold(III), [AuCl&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;7&lt;/sub&gt;H&lt;sub&gt;9&lt;/sub&gt;N)], &lt;strong&gt;7&lt;/strong&gt;. Additionally, the structure of &lt;strong&gt;8&lt;/strong&gt;, the 1:1 adduct of &lt;strong&gt;2&lt;/strong&gt; and &lt;strong&gt;6&lt;/strong&gt;, [AuBr&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;6&lt;/sub&gt;H&lt;sub&gt;7&lt;/sub&gt;N)]·[AuBr&lt;sub&gt;3&lt;/sub&gt;(C&lt;sub&gt;7&lt;/sub&gt;H&lt;sub&gt;9&lt;/sub&gt;N)], is included. All the structures crystallize solvent-free, and all have &lt;em&gt;Z&lt;/em&gt;′ = 1 except for &lt;strong&gt;5&lt;/strong&gt; and &lt;strong&gt;7&lt;/strong&gt;, which display crystallographic twofold rotation symmetry, and &lt;strong&gt;4&lt;/strong&gt;, which has &lt;em&gt;Z&lt;/em&gt;′ = 2. &lt;strong&gt;1a&lt;/strong&gt; and &lt;strong&gt;2&lt;/strong&gt; are isotypic. The coordination geometry at the gold(III) atoms is, as expected, square-planar. Four of the crystals (&lt;strong&gt;1a&lt;/strong&gt;, &lt;strong&gt;1b&lt;/strong&gt;, &lt;strong&gt;2&lt;/strong&gt; and &lt;strong&gt;8&lt;/strong&gt;) were non-merohedral twins, and these structures were refined using the ‘HKLF 5’ method. The largest inter­planar angles between the pyridine ring and the coordination plane are observed for those structures with a 2-methyl substituent of the pyridine ring. The Au—N bonds are consistently longer &lt;em&gt;trans&lt;/em&gt; to Br (average 2.059 Å) than &lt;em&gt;trans&lt;/em&gt; to Cl (average 2.036 Å). In the crystal packing, a frequent feature is the offset-stacked and approximately rectangular dimeric moiety (Au—&lt;em&gt;X&lt;/em&gt;)&lt;sub&gt;2&lt;/sub&gt;, with anti­parallel Au—&lt;em&gt;X&lt;/em&gt; bonds linked by Au⋯&lt;em&gt;X&lt;/em&gt; contacts at the vacant positions axial to the coordination plane. The dimers are connected by further secondary inter­actions (Au⋯&lt;em&gt;X&lt;/em&gt; or &lt;em&gt;X&lt;/em&gt;⋯&lt;em&gt;X&lt;/em&gt; contacts, ‘weak’ C—H⋯&lt;em&gt;X&lt;/em&gt; hydrogen bonds) to form chain, double chain (‘ladder’) or laye","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 894-909"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11299753/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141896454","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, crystal structure and Hirshfeld surface analysis of [1-(4-bromo­phen­yl)-1H-1,2,3-triazol-4-yl]methyl 2-(4-nitro­phen­oxy)acetate 1-(4-溴-苯基)-1H-1,2,3-三唑-4-基]甲基 2-(4-硝基-苯氧基)乙酸酯的合成、晶体结构和 Hirshfeld 表面分析。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024007436
Muminjon Hakimov , Shakhnoza Khozhimatova , Ilkhomjon Ortikov , Ibragimdjan Abdugafurov , Akmaljon Tojiboev

The title mol­ecule has a twisted conformation and is connected with its neighbours by C—H⋯O and C—H⋯N hydrogen bonds, π–π and Br–π inter­actions.

The title compound, C17H13BrN4O5, was synthesized by a Cu2Br2-catalysed Meldal–Sharpless reaction between 4-nitro­phen­oxy­acetic acid propargyl ether and para-bromo­phenyl­azide, and characterized by X-ray structure determination and 1H NMR spectroscopy. The mol­ecules, with a near-perpendicular orientation of the bromo­phenyl-triazole and nitro­phen­oxy­acetate fragments, are connected into a three-dimensional network by inter­molecular C—H⋯O and C—H⋯N hydrogen bonds (confirmed by Hirshfeld surface analysis), π–π and Br–π inter­actions.

标题化合物 C17H13BrN4O5 是通过 Cu2Br2 催化的 Meldal-Sharpless 反应在 4-硝基苯氧基乙酸丙炔醚和对溴苯氮化物之间合成的,并通过 X 射线结构测定和 1H NMR 光谱进行了表征。溴苯三唑和硝基苯氧乙酸片段的分子结构近乎垂直,通过分子间的 C-H⋯O 和 C-H⋯N 氢键(经 Hirshfeld 表面分析确认)、π-π 和 Br-π 相互作用连接成三维网络。
{"title":"Synthesis, crystal structure and Hirshfeld surface analysis of [1-(4-bromo­phen­yl)-1H-1,2,3-triazol-4-yl]methyl 2-(4-nitro­phen­oxy)acetate","authors":"Muminjon Hakimov ,&nbsp;Shakhnoza Khozhimatova ,&nbsp;Ilkhomjon Ortikov ,&nbsp;Ibragimdjan Abdugafurov ,&nbsp;Akmaljon Tojiboev","doi":"10.1107/S2056989024007436","DOIUrl":"10.1107/S2056989024007436","url":null,"abstract":"<div><p>The title mol­ecule has a twisted conformation and is connected with its neighbours by C—H⋯O and C—H⋯N hydrogen bonds, π–π and Br–π inter­actions.</p></div><div><p>The title compound, C<sub>17</sub>H<sub>13</sub>BrN<sub>4</sub>O<sub>5</sub>, was synthesized by a Cu<sub>2</sub>Br<sub>2</sub>-catalysed Meldal–Sharpless reaction between 4-nitro­phen­oxy­acetic acid propargyl ether and <em>para</em>-bromo­phenyl­azide, and characterized by X-ray structure determination and <sup>1</sup>H NMR spectroscopy. The mol­ecules, with a near-perpendicular orientation of the bromo­phenyl-triazole and nitro­phen­oxy­acetate fragments, are connected into a three-dimensional network by inter­molecular C—H⋯O and C—H⋯N hydrogen bonds (confirmed by Hirshfeld surface analysis), π–π and Br–π inter­actions.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 910-912"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11299749/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141896455","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal structure determination and Hirshfeld surface analysis of N-acetyl-N-3-meth­oxy­phenyl and N-(2,5-di­meth­oxy­phen­yl)-N-phenyl­sulfonyl derivatives of N-[1-(phenyl­sulfon­yl)-1H-indol-2-yl]methanamine N-乙酰基-N-3-甲氧基苯基和 N-苯磺酰基-N-(2,5-二甲氧基苯基)衍生物[1-(苯磺酰基)-1H-吲哚-2-基]甲胺的晶体结构测定和希尔斯菲尔德表面分析
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006649
S. Madhan , M. NizamMohideen , Vinayagam Pavunkumar , Arasambattu K. MohanaKrishnan

The crystal structures of two 1H-indole derivatives are described and the inter­molecular contacts in the crystals are assessed and analysed using Hirshfeld surface analysis and two-dimensional fingerprint plots.

Two new [1-(phenyl­sulfon­yl)-1H-indol-2-yl]methanamine derivatives, namely, N-(3-meth­oxy­phen­yl)-N-{[1-(phenyl­sulfon­yl)-1H-indol-2-yl]meth­yl}acetamide, C24H22N2O4S, (I), and N-(2,5-di­meth­oxy­phen­yl)-N-{[1-(phenyl­sulfon­yl)-1H-indol-2-yl]meth­yl}benzene­sulfonamide, C29H26N2O6S2, (II), reveal a nearly orthogonal orientation of their indole ring systems and sulfonyl-bound phenyl rings. The sulfonyl moieties adopt the anti-periplanar conformation. For both compounds, the crystal packing is dominated by C—H⋯O bonding [C⋯O = 3.312 (4)–3.788 (8) Å], with the structure of II exhibiting a larger number, but weaker bonds of this type. Slipped π–π inter­actions of anti­parallel indole systems are specific for I, whereas the structure of II delivers two kinds of C—H⋯π inter­actions at both axial sides of the indole moiety. These findings agree with the results of Hirshfeld surface analysis. The primary contributions to the surface areas are associated with the contacts involving H atoms. Although II manifests a larger fraction of the O⋯H/H⋯O contacts (25.8 versus 22.4%), most of them are relatively distal and agree with the corresponding van der Waals separations.

两种新的[1-(苯磺酰基)-1H-吲哚-2-基]甲胺衍生物,即N-(3-甲氧基苯基)-N-{[1-(苯磺酰基)-1H-吲哚-2-基]甲基}乙酰胺,C24H22N2O4S,(I)和N-(2、和 N-(2,5-二甲氧基苯基)-N-{[1-(苯磺酰基)-1H-吲哚-2-基]甲基}苯磺酰胺,C29H26N2O6S2,(II),显示出它们的吲哚环系统和磺酰基结合的苯基环的取向几乎是正交的。磺酰基采用反全平面构象。这两种化合物的晶体结构都以 C-H...O 键为主[C...O = 3.312 (4)-3.788 (8) Å],其中 II 的结构中这类键的数量较多,但强度较弱。反平行吲哚体系的滑动 π-π 相互作用是 I 的特异之处,而 II 的结构则在吲哚分子的两个轴向提供了两种 C-H...π 相互作用。这些发现与 Hirshfeld 表面分析的结果一致。表面积的主要贡献与涉及 H 原子的接触有关。虽然 II 的 O...H/H...O 接触比例较大(25.8% 对 22.4%),但大部分接触距离相对较远,与相应的范德华分离度一致。
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引用次数: 0
Crystal structure of the 1:1 co-crystal 4-(di­methylamino)­pyridin-1-ium 8-hy­droxy­quinoline-5-sulfonate–N,N-di­methyl­pyridin-4-amine 1:1 共晶体 4-(二甲基氨基)吡啶-1-鎓 8-羟基喹啉-5-磺酸盐-N,N-二甲基吡啶-4-胺的晶体结构
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S205698902400642X
Mami Isobe , Yukiyasu Kashiwagi , Koji Kubono

The asymmetric unit of the title compound consists of two independent ion pairs of 4-(di­methyl­amino)­pyridin-1-ium quinolin-8-ol-5-sulfonate (HDMAP+·HqSA) and neutral N,N-di­methyl­pyridin-4-amine (DMAP), forming a 1:1:1 cation:anion:neutral mol­ecule co-crystal. The compound has a layered structure, including cation layers of HDMAP+ with DMAP and anion layers of HqSA in the crystal. The cation and anion layers are linked by inter­molecular C—H⋯O hydrogen bonds and C—H⋯π inter­actions.

The asymmetric unit of the title compound is composed of two independent ion pairs of 4-(di­methyl­amino)­pyridin-1-ium 8-hy­droxy­quinoline-5-sulfonate (HDMAP+·HqSA, C7H11N2+·C9H6NO4S) and neutral N,N-di­methyl­pyridin-4-amine mol­ecules (DMAP, C7H10N2), co-crystallized as a 1:1:1 HDMAP+:HqSA:DMAP adduct in the monoclinic system, space group Pc. The compound has a layered structure, including cation layers of HDMAP+ with DMAP and anion layers of HqSA in the crystal. In the cation layer, there are inter­molecular N—H⋯N hydrogen bonds between the protonated HDMAP+ mol­ecule and the neutral DMAP mol­ecule. In the anion layer, each HqSA is surrounded by other six HqSA, where the planar network structure is formed by inter­molecular O—H⋯O and C—H⋯O hydrogen bonds. The cation and anion layers are linked by inter­molecular C—H⋯O hydrogen bonds and C—H⋯π inter­actions.

标题化合物的不对称单元由 4-(二甲基氨基)吡啶-1-鎓 8-羟基喹啉-5-磺酸盐(HDMAP+-HqSA-,C7H11N2 +-C9H6NO4S-)和中性 N,N-二甲基吡啶-4-胺分子(DMAP,C7H10N2)的两个独立离子对组成,共晶体为 1:1:1 HDMAP+:HqSA-:DMAP 加合物的单斜体系,空间群为 Pc。该化合物具有层状结构,晶体中包括 HDMAP+ 与 DMAP 的阳离子层和 HqSA- 的阴离子层。在阳离子层中,质子化的 HDMAP+ 分子与中性的 DMAP 分子之间存在分子间 N-H...N 氢键。在阴离子层中,每个 HqSA- 被其他六个 HqSA- 包围,分子间的 O-H...O 和 C-H...O 氢键形成平面网络结构。阳离子层和阴离子层通过分子间的 C-H...O 氢键和 C-H...π 相互作用连接在一起。
{"title":"Crystal structure of the 1:1 co-crystal 4-(di­methylamino)­pyridin-1-ium 8-hy­droxy­quinoline-5-sulfonate–N,N-di­methyl­pyridin-4-amine","authors":"Mami Isobe ,&nbsp;Yukiyasu Kashiwagi ,&nbsp;Koji Kubono","doi":"10.1107/S205698902400642X","DOIUrl":"10.1107/S205698902400642X","url":null,"abstract":"<div><p>The asymmetric unit of the title compound consists of two independent ion pairs of 4-(di­methyl­amino)­pyridin-1-ium quinolin-8-ol-5-sulfonate (HDMAP<sup>+</sup>·HqSA<sup>−</sup>) and neutral <em>N</em>,<em>N</em>-di­methyl­pyridin-4-amine (DMAP), forming a 1:1:1 cation:anion:neutral mol­ecule co-crystal. The compound has a layered structure, including cation layers of HDMAP<sup>+</sup> with DMAP and anion layers of HqSA<sup>−</sup> in the crystal. The cation and anion layers are linked by inter­molecular C—H⋯O hydrogen bonds and C—H⋯<em>π</em> inter­actions.</p></div><div><p>The asymmetric unit of the title compound is composed of two independent ion pairs of 4-(di­methyl­amino)­pyridin-1-ium 8-hy­droxy­quinoline-5-sulfonate (HDMAP<sup>+</sup>·HqSA<sup>−</sup>, C<sub>7</sub>H<sub>11</sub>N<sub>2</sub><sup>+</sup>·C<sub>9</sub>H<sub>6</sub>NO<sub>4</sub>S<sup>−</sup>) and neutral <em>N</em>,<em>N</em>-di­methyl­pyridin-4-amine mol­ecules (DMAP, C<sub>7</sub>H<sub>10</sub>N<sub>2</sub>), co-crystallized as a 1:1:1 HDMAP<sup>+</sup>:HqSA<sup>−</sup>:DMAP adduct in the monoclinic system, space group <em>Pc</em>. The compound has a layered structure, including cation layers of HDMAP<sup>+</sup> with DMAP and anion layers of HqSA<sup>−</sup> in the crystal. In the cation layer, there are inter­molecular N—H⋯N hydrogen bonds between the protonated HDMAP<sup>+</sup> mol­ecule and the neutral DMAP mol­ecule. In the anion layer, each HqSA<sup>−</sup> is surrounded by other six HqSA<sup>−</sup>, where the planar network structure is formed by inter­molecular O—H⋯O and C—H⋯O hydrogen bonds. The cation and anion layers are linked by inter­molecular C—H⋯O hydrogen bonds and C—H⋯<em>π</em> inter­actions.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 840-844"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141665240","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal structure of polymeric bis­(3-amino-1H-pyrazole)­cadmium diiodide 聚合双(3-氨基-1H-吡唑)二碘化镉的晶体结构
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006418
Iryna S. Kuzevanova , Oleksandr S. Vynohradov , Vadim A. Pavlenko , Sergey O. Malinkin , Sergiu Shova , Igor O. Fritsky , Maksym Seredyuk

The title compound, {[Cd(3-apz2)]I2}n consists of a Cd2+ cation, iodine anions balancing the charge and bridging 3-amino­pyrazole (3-apz) mol­ecules. The Cd2+ cations are coordinated by two iodine anions and two apz ligands, generating trans-CdN4I2 octa­hedra, and are linked into chains by pairs of the bridging ligand. In the crystal structure, the apz ligands and iodide anions of neighboring chains are linked through inter­chain hydrogen bonding into a two-dimensional supra­molecular network.

The reaction of cadmium iodide with 3-amino­pyrazole (3-apz) in ethano­lic solution leads to tautomerization of the ligand and the formation of crystals of the title compound, catena-poly[[di­iodido­cadmium(II)]-bis­(μ-3-amino-1H-pyrazole)-κ2N2:N32N3:N2], [CdI2(C3H5N3)2]n or [CdI2(3-apz)2]n. Its asymmetric unit consists of a half of a Cd2+ cation, an iodide anion and a 3-apz mol­ecule. The Cd2+ cations are coordinated by two iodide anions and two 3-apz ligands, generating trans-CdN4I2 octa­hedra, which are linked into chains by pairs of the bridging ligands. In the crystal, the ligand mol­ecules and iodide anions of neighboring chains are linked through inter­chain hydrogen bonds into a di-periodic network. The inter­molecular contacts were qu­anti­fied using Hirshfeld surface analysis and two-dimensional fingerprint plots, revealing the relative qu­anti­tative contributions of the weak inter­molecular contacts.

碘化镉与 3-氨基吡唑(3-apz)在乙醇溶液中发生反应,导致配体发生同素异形反应,形成标题化合物 catena-poly[[diiodidocadmium(II)]-bis(μ-3-amino-1H-pyrazole)-κ2 N 2:N 3;κ2 N 3:N 2], [CdI2(C3H5N3)2] n 或 [CdI2(3-apz)2] n 的晶体。其不对称单元由半个 Cd2+ 阳离子、一个碘化阴离子和一个 3-apz 分子组成。Cd2+ 阳离子由两个碘化阴离子和两个 3-apz 配体配位,生成反式-CdN4I2 八面体,这些八面体由成对的桥接配体连接成链。在晶体中,配体分子和相邻链的碘阴离子通过链间氢键连接成一个双周期网络。利用 Hirshfeld 表面分析和二维指纹图谱对分子间接触进行了量化,揭示了弱分子间接触的相对数量贡献。
{"title":"Crystal structure of polymeric bis­(3-amino-1H-pyrazole)­cadmium diiodide","authors":"Iryna S. Kuzevanova ,&nbsp;Oleksandr S. Vynohradov ,&nbsp;Vadim A. Pavlenko ,&nbsp;Sergey O. Malinkin ,&nbsp;Sergiu Shova ,&nbsp;Igor O. Fritsky ,&nbsp;Maksym Seredyuk","doi":"10.1107/S2056989024006418","DOIUrl":"10.1107/S2056989024006418","url":null,"abstract":"<div><p>The title compound, {[Cd(3-apz<sub>2</sub>)]I<sub>2</sub>}<sub>n</sub> consists of a Cd<sup>2+</sup> cation, iodine anions balancing the charge and bridging 3-amino­pyrazole (3-apz) mol­ecules. The Cd<sup>2+</sup> cations are coordinated by two iodine anions and two apz ligands, generating <em>trans</em>-CdN<sub>4</sub>I<sub>2</sub> octa­hedra, and are linked into chains by pairs of the bridging ligand. In the crystal structure, the apz ligands and iodide anions of neighboring chains are linked through inter­chain hydrogen bonding into a two-dimensional supra­molecular network.</p></div><div><p>The reaction of cadmium iodide with 3-amino­pyrazole (3-apz) in ethano­lic solution leads to tautomerization of the ligand and the formation of crystals of the title compound, <em>catena</em>-poly[[di­iodido­cadmium(II)]-bis­(μ-3-amino-1<em>H</em>-pyrazole)-κ<sup>2</sup><em>N</em><sup>2</sup>:<em>N</em><sup>3</sup>;κ<sup>2</sup><em>N</em><sup>3</sup>:<em>N</em><sup>2</sup>], [CdI<sub>2</sub>(C<sub>3</sub>H<sub>5</sub>N<sub>3</sub>)<sub>2</sub>]<sub>n</sub> or [CdI<sub>2</sub>(3-apz)<sub>2</sub>]<sub>n</sub>. Its asymmetric unit consists of a half of a Cd<sup>2+</sup> cation, an iodide anion and a 3-apz mol­ecule. The Cd<sup>2+</sup> cations are coordinated by two iodide anions and two 3-apz ligands, generating <em>trans</em>-CdN<sub>4</sub>I<sub>2</sub> octa­hedra, which are linked into chains by pairs of the bridging ligands. In the crystal, the ligand mol­ecules and iodide anions of neighboring chains are linked through inter­chain hydrogen bonds into a di-periodic network. The inter­molecular contacts were qu­anti­fied using Hirshfeld surface analysis and two-dimensional fingerprint plots, revealing the relative qu­anti­tative contributions of the weak inter­molecular contacts.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 816-819"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141676477","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, mol­ecular and crystal structure of [(NH2)2CSSC(NH2)2]2[RuBr6]Br2·3H2O (NH2)2CSSC(NH2)2]2[RuBr6]Br2-3H2O的合成、分子和晶体结构。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-08-01 DOI: 10.1107/S2056989024006832
Olga V. Rudnitskaya , Milena R. Komarovskikh , Maria G. Pekarskaya , Daniil S. Pshenichnyy , Mehmet Akkurt , Ali N. Khalilov , Ajaya Bhattarai , Ibrahim G. Mamedov

The [RuBr6]2− anionic complex has an octa­hedral structure. The Ru—Br distances fall in the range 2.4779 (4)–2.4890 (4) Å. The S—S and C—S distances are 2.0282 (12) and 1.783 (2) Å, respectively. The H2O mol­ecules, Br ions, and NH2 groups of the cation are linked by hydrogen bonds.

The title compound, bis­[di­thio­bis­(formamidinium)] hexa­bromido­ruthenium dibromide trihydrate, [(NH2)2CSSC(NH2)2]2[RuBr6]Br2·3H2O, crystallizes in the ortho­rhom­bic system, space group Cmcm, Z = 4. The [RuBr6]2− anionic complex has an octa­hedral structure. The Ru—Br distances fall in the range 2.4779 (4)–2.4890 (4) Å. The S—S and C—S distances are 2.0282 (12) and 1.783 (2) Å, respectively. The H2O mol­ecules, Br ions, and NH2 groups of the cation are linked by hydrogen bonds. The conformation of the cation is consolidated by intra­molecular O—H⋯Br, O—H⋯O, N—H⋯Br and N—H⋯O hydrogen bonds. The [(NH2)2CSSC(NH2)2]2+ cations form a hydrogen-bonded system involving the Br ions and the water mol­ecules. Two Br anions form four hydrogen bonds, each with the NH2 groups of two cations, thus linking the cations into a ring. The rings are connected by water mol­ecules, forming N—H⋯O—H⋯Br hydrogen bonds.

标题化合物,双-[二-硫代-双-(甲脒)]六溴-二溴化钌三水合物,[(NH2)2CSSC(NH2)2]2[RuBr6]Br2-3H2O,在正虹双晶系中结晶,空间群 Cmcm,Z = 4。RuBr6]2- 阴离子配合物具有八面体结构。Ru-Br 的距离范围为 2.4779 (4)-2.4890 (4) Å。S-S 和 C-S 距离分别为 2.0282 (12) Å 和 1.783 (2) Å。阳离子的 H2O 分子、Br 离子和 NH2 基团通过氢键相连。分子内的 O-H⋯Br、O-H⋯O、N-H⋯Br 和 N-H⋯O 氢键巩固了阳离子的构象。(NH2)2CSSC(NH2)2]2+阳离子形成一个氢键系统,涉及 Br - 离子和水分子。两个 Br - 阴离子分别与两个阳离子的 NH2 基团形成四个氢键,从而将阳离子连接成一个环。这些环由水分子连接,形成 N-H⋯O-H⋯Br 氢键。
{"title":"Synthesis, mol­ecular and crystal structure of [(NH2)2CSSC(NH2)2]2[RuBr6]Br2·3H2O","authors":"Olga V. Rudnitskaya ,&nbsp;Milena R. Komarovskikh ,&nbsp;Maria G. Pekarskaya ,&nbsp;Daniil S. Pshenichnyy ,&nbsp;Mehmet Akkurt ,&nbsp;Ali N. Khalilov ,&nbsp;Ajaya Bhattarai ,&nbsp;Ibrahim G. Mamedov","doi":"10.1107/S2056989024006832","DOIUrl":"10.1107/S2056989024006832","url":null,"abstract":"<div><p>The [RuBr<sub>6</sub>]<sup>2−</sup> anionic complex has an octa­hedral structure. The Ru—Br distances fall in the range 2.4779 (4)–2.4890 (4) Å. The S—S and C—S distances are 2.0282 (12) and 1.783 (2) Å, respectively. The H<sub>2</sub>O mol­ecules, Br<sup>−</sup> ions, and NH<sub>2</sub> groups of the cation are linked by hydrogen bonds.</p></div><div><p>The title compound, bis­[di­thio­bis­(formamidinium)] hexa­bromido­ruthenium dibromide trihydrate, [(NH<sub>2</sub>)<sub>2</sub>CSSC(NH<sub>2</sub>)<sub>2</sub>]<sub>2</sub>[RuBr<sub>6</sub>]Br<sub>2</sub>·3H<sub>2</sub>O, crystallizes in the ortho­rhom­bic system, space group <em>Cmcm</em>, <em>Z</em> = 4. The [RuBr<sub>6</sub>]<sup>2−</sup> anionic complex has an octa­hedral structure. The Ru—Br distances fall in the range 2.4779 (4)–2.4890 (4) Å. The S—S and C—S distances are 2.0282 (12) and 1.783 (2) Å, respectively. The H<sub>2</sub>O mol­ecules, Br<sup>−</sup> ions, and NH<sub>2</sub> groups of the cation are linked by hydrogen bonds. The conformation of the cation is consolidated by intra­molecular O—H⋯Br, O—H⋯O, N—H⋯Br and N—H⋯O hydrogen bonds. The [(NH<sub>2</sub>)<sub>2</sub>CSSC(NH<sub>2</sub>)<sub>2</sub>]<sup>2+</sup> cations form a hydrogen-bonded system involving the Br <sup>−</sup> ions and the water mol­ecules. Two Br <sup>−</sup> anions form four hydrogen bonds, each with the NH<sub>2</sub> groups of two cations, thus linking the cations into a ring. The rings are connected by water mol­ecules, forming N—H⋯O—H⋯Br hydrogen bonds.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 886-889"},"PeriodicalIF":0.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11299746/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141896456","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A 1:1 flavone cocrystal with cyclic trimeric perfluoro-o-phenyl­enemercury 与环状三聚全氟邻苯基汞的 1:1 黄酮共晶体
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-06-01 DOI: 10.1107/S2056989024005346
Egor M. Novikov , Raúl Castañeda , Marina S. Fonari , Tatiana V. Timofeeva , G. Diaz de Delgado (Editor)

In the title compound, mol­ecules are connected by Hg⋯O inter­actions. The 1:1 complexes pack in zigzag chains where they stack via two alternating stacking patterns, TPPM(cyclic trimeric perfluoro-o-phenyl­enemercury)–TPPM, and FLA(flavone)–FLA. The shortened F⋯F, CH⋯F and CH⋯π contacts consolidate the crystal structure.

The title compound, systematic name tris­(μ2-perfluoro-o-phenyl­ene)(μ2-3-phenyl-4H-chromen-4-one)-triangulo-trimercury, [Hg3(C6F4)3(C15H10O2)], crystallizes in the monoclinic P21/n space group with one flavone (FLA) and one cyclic trimeric perfluoro-o-phenyl­enemercury (TPPM) mol­ecule per asymmetric unit. The FLA mol­ecule is located on one face of the TPPM acceptor and is linked in an asymmetric coordination of its carbonyl oxygen atom with two Hg centers of the TPPM macrocycle. The angular-shaped complexes pack in zigzag chains where they stack via two alternating TPPM–TPPM and FLA–FLA stacking patterns. The distance between the mean planes of the neighboring TPPM macrocycles in the stack is 3.445 (2) Å, and that between the benzo-γ-pyrone moieties of FLA is 3.328 (2) Å. The neighboring stacks are inter­digitated through the shortened F⋯F, CH⋯F and CH⋯π contacts, forming a dense crystal structure.

标题化合物的系统名称为三(μ2-全氟邻苯)(μ2-3-苯基-4H-色烯-4-酮)-三甘露三汞[Hg3(C6F4)3(C15H10O2)],在单斜 P21/n 空间群中结晶,每个不对称单元含有一个黄酮(FLA)分子和一个环状三聚全氟邻苯三汞(TPPM)分子。FLA 分子位于 TPPM 受体的一个面上,其羰基氧原子与 TPPM 大环的两个汞中心不对称配位连接。角状复合物形成人字形链,通过 TPPM-TPPM 和 FLA-FLA 两种交替堆叠模式进行堆叠。堆栈中相邻 TPPM 大环的平均平面间距为 3.445 (2) Å,FLA 的苯γ-吡喃酮分子间距为 3.328 (2) Å。通过缩短的 F...F、CH...F 和 CH...π 接触,相邻堆栈相互咬合,形成致密的晶体结构。
{"title":"A 1:1 flavone cocrystal with cyclic trimeric perfluoro-o-phenyl­enemercury","authors":"Egor M. Novikov ,&nbsp;Raúl Castañeda ,&nbsp;Marina S. Fonari ,&nbsp;Tatiana V. Timofeeva ,&nbsp;G. Diaz de Delgado (Editor)","doi":"10.1107/S2056989024005346","DOIUrl":"10.1107/S2056989024005346","url":null,"abstract":"<div><p>In the title compound, mol­ecules are connected by Hg⋯O inter­actions. The 1:1 complexes pack in zigzag chains where they stack <em>via</em> two alternating stacking patterns, TPPM(cyclic trimeric perfluoro-<em>o</em>-phenyl­enemercury)–TPPM, and FLA(flavone)–FLA. The shortened F⋯F, CH⋯F and CH⋯π contacts consolidate the crystal structure.</p></div><div><p>The title compound, systematic name tris­(μ<sub>2</sub>-perfluoro-<em>o</em>-phenyl­ene)(μ<sub>2</sub>-3-phenyl-4<em>H</em>-chromen-4-one)-<em>triangulo</em>-trimercury, [Hg<sub>3</sub>(C<sub>6</sub>F<sub>4</sub>)<sub>3</sub>(C<sub>15</sub>H<sub>10</sub>O<sub>2</sub>)], crystallizes in the monoclinic <em>P</em>2<sub>1</sub>/<em>n</em> space group with one flavone (FLA) and one cyclic trimeric perfluoro-<em>o</em>-phenyl­enemercury (TPPM) mol­ecule per asymmetric unit. The FLA mol­ecule is located on one face of the TPPM acceptor and is linked in an asymmetric coordination of its carbonyl oxygen atom with two Hg centers of the TPPM macrocycle. The angular-shaped complexes pack in zigzag chains where they stack <em>via</em> two alternating TPPM–TPPM and FLA–FLA stacking patterns. The distance between the mean planes of the neighboring TPPM macrocycles in the stack is 3.445 (2) Å, and that between the benzo-γ-pyrone moieties of FLA is 3.328 (2) Å. The neighboring stacks are inter­digitated through the shortened F⋯F, CH⋯F and CH⋯π contacts, forming a dense crystal structure.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 7","pages":"Pages 717-720"},"PeriodicalIF":0.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141341982","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A monoclinic polymorph of chloro­thia­zide 氯噻嗪的单斜多晶型。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-06-01 DOI: 10.1107/S2056989024006078
Rowan K. H. Brydson , Alan R. Kennedy , F. Di Salvo (Editor)

Accessible from basic aqueous solutions, a new monoclinic polymorph of the diuretic chloro­thia­zide is described.

A new polymorph of the diuretic chloro­thia­zide, 6-chloro-1,1-dioxo-2H-1,2,4-benzo­thia­zine-7-sulfonamide, C7H6ClN3O4S2, is described. Crystallized from basic aqueous solution, this monoclinic polymorph is found to be less thermodynamically favoured than the known triclinic polymorph and to feature only N—H⋯O type inter­molecular hydrogen bonds as opposed to the N—H⋯O and N—H⋯N type hydrogen bonds found in the P1 form.

本文描述了利尿剂氯噻嗪(6-氯-1,1-二氧代-2H-1,2,4-苯并噻嗪-7-磺酰胺,C7H6ClN3O4S2)的一种新的多晶型。从碱性水溶液中结晶出的这种单斜多晶体,其热力学性质不如已知的三斜多晶体,其分子间氢键只有 N-H⋯O 型,而 P1 型中则有 N-H⋯O 和 N-H⋯N 型氢键。
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引用次数: 0
Crystal structure and Hirshfeld surface analysis of dimeth­yl(phen­yl)phosphine sulfide 二甲基-基(苯基)硫化膦的晶体结构和希尔斯菲尔德表面分析。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-06-01 DOI: 10.1107/S2056989024005668
Robin Risken , Yasin Mehmet Kuzu , Annika Schmidt , Carsten Strohmann , W. T. A. Harrison (Editor)

The title compound, C8H11PS, which melts below room temperature, was crystallized at low temperature. The P—S bond length is 1.9623 (5) Å and the major contributors to the Hirshfeld surface are H⋯H, S⋯H/H⋯S and C⋯H/H⋯C contacts.

The title compound, C8H11PS, which melts below room temperature, was crystallized at low temperature. The P—S bond length is 1.9623 (5) Å and the major contributors to the Hirshfeld surface are H⋯H (58.1%), S⋯H/H⋯S (13.4%) and C⋯H/H⋯C contacts (11.7%).

标题化合物 C8H11PS 在室温以下熔化,并在低温下结晶。P-S 键长度为 1.9623 (5) Å,Hirshfeld 表面的主要成分是 H⋯H (58.1%)、S⋯H/H⋯S (13.4%)和 C⋯H/H⋯C 接触(11.7%)。
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引用次数: 0
Crystal structure determination and analyses of Hirshfeld surface, crystal voids, inter­molecular inter­action energies and energy frameworks of 1-benzyl-4-(methyl­sulfan­yl)-3a,7a-di­hydro-1H-pyrazolo­[3,4-d]pyrimidine 1-benzyl-4-(methyl-sulfan-yl)-3a,7a-di-hydro-1H-pyrazolo-[3,4-d]pyrimidine 的晶体结构测定及 Hirshfeld 表面、晶体空隙、分子间作用能和能量框架分析。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-06-01 DOI: 10.1107/S2056989024005954
Nour El Hoda Mustaphi , Amina Chlouchi , Mohamed El Hafi , Joel T. Mague , Tuncer Hökelek , Hanae El Monfalouti , Amal Haoudi , Ahmed Mazzah , M. Weil (Editor)

In the title mol­ecule, the pyrazolo­pyrimidine moiety is planar with the methyl­sulfanyl substituent lying essentially in the same plane, whereas the benzyl group is rotated well out of this plane giving the mol­ecule an approximate L shape.

The pyrazolo­pyrimidine moiety in the title mol­ecule, C13H12N4S, is planar with the methyl­sulfanyl substituent lying essentially in the same plane. The benzyl group is rotated well out of this plane by 73.64 (6)°, giving the mol­ecule an approximate L shape. In the crystal, C—H⋯π(ring) inter­actions and C—H⋯S hydrogen bonds form tubes extending along the a axis. Furthermore, there are π–π inter­actions between parallel phenyl rings with centroid-to-centroid distances of 3.8418 (12) Å. A Hirshfeld surface analysis of the crystal structure indicates that the most important contributions to the crystal packing are from H⋯H (47.0%), H⋯N/N⋯H (17.6%) and H⋯C/C⋯H (17.0%) inter­actions. The volume of the crystal voids and the percentage of free space were calculated to be 76.45 Å3 and 6.39%, showing that there is no large cavity in the crystal packing. Evaluation of the electrostatic, dispersion and total energy frameworks indicate that the cohesion of the crystal structure is dominated by the dispersion energy contributions.

标题分子 C13H12N4S 中的吡唑并嘧啶分子是平面的,甲基硫代基基本上位于同一平面内。苄基在该平面外旋转了 73.64 (6)°,使分子近似于 L 形。在晶体中,C-H⋯π(环)相互作用和 C-H⋯S 氢键形成了沿 a 轴延伸的管状结构。此外,平行苯环之间存在 π-π 相互作用,其中心距为 3.8418 (12) Å。晶体结构的 Hirshfeld 表面分析表明,H⋯H(47.0%)、H⋯N/N⋯H(17.6%)和 H⋯C/C⋯H (17.0%)相互作用对晶体堆积的贡献最大。计算得出的晶体空隙体积和自由空间百分比分别为 76.45 Å3 和 6.39%,表明晶体堆积中不存在大型空腔。对静电、色散和总能框架的评估表明,晶体结构的内聚力主要由色散能贡献。
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引用次数: 0
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Acta Crystallographica Section E: Crystallographic Communications
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