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Open-Set Heterogeneous Domain Adaptation: Theoretical Analysis and Algorithm. 开集异构域自适应:理论分析与算法。
Thai-Hoang Pham, Yuanlong Wang, Changchang Yin, Xueru Zhang, Ping Zhang

Domain adaptation (DA) tackles the issue of distribution shift by learning a model from a source domain that generalizes to a target domain. However, most existing DA methods are designed for scenarios where the source and target domain data lie within the same feature space, which limits their applicability in real-world situations. Recently, heterogeneous DA (HeDA) methods have been introduced to address the challenges posed by heterogeneous feature space between source and target domains. Despite their successes, current HeDA techniques fall short when there is a mismatch in both feature and label spaces. To address this, this paper explores a new DA scenario called open-set HeDA (OSHeDA). In OSHeDA, the model must not only handle heterogeneity in feature space but also identify samples belonging to novel classes. To tackle this challenge, we first develop a novel theoretical framework that constructs learning bounds for prediction error on target domain. Guided by this framework, we propose a new DA method called Representation Learning for OSHeDA (RL-OSHeDA). This method is designed to simultaneously transfer knowledge between heterogeneous data sources and identify novel classes. Experiments across text, image, and clinical data demonstrate the effectiveness of our algorithm. Model implementation is available at https://github.com/pth1993/OSHeDA.

领域适应(DA)通过从源领域学习模型来解决分布转移的问题,该模型可以推广到目标领域。然而,大多数现有的数据分析方法都是为源域和目标域数据位于同一特征空间的场景而设计的,这限制了它们在实际情况中的适用性。近年来,为了解决源域和目标域之间的异构特征空间所带来的挑战,引入了异构数据分析(HeDA)方法。尽管取得了成功,但当前的HeDA技术在特征空间和标签空间不匹配时仍存在不足。为了解决这个问题,本文探讨了一种新的数据处理方案,称为开放集HeDA (OSHeDA)。在OSHeDA中,模型不仅要处理特征空间的异质性,而且要识别属于新类的样本。为了解决这一挑战,我们首先开发了一个新的理论框架,该框架构建了目标域预测误差的学习边界。在此框架的指导下,我们提出了一种新的数据分析方法,称为OSHeDA的表示学习(RL-OSHeDA)。该方法旨在同时在异构数据源之间传递知识并识别新类。文本、图像和临床数据的实验证明了我们算法的有效性。模型实现可从https://github.com/pth1993/OSHeDA获得。
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引用次数: 0
Step-Calibrated Diffusion for Biomedical Optical Image Restoration. 生物医学光学图像恢复的步进校准扩散。
Pub Date : 2025-02-01 Epub Date: 2025-04-11 DOI: 10.1609/aaai.v39i6.32635
Yiwei Lyu, Sung Jik Cha, Cheng Jiang, Asadur Zaman Chowdury, Xinhai Hou, Edward S Harake, Akhil Kondepudi, Christian Freudiger, Honglak Lee, Todd C Hollon

High-quality, high-resolution medical imaging is essential for clinical care. Raman-based biomedical optical imaging uses non-ionizing infrared radiation to evaluate human tissues in real time and is used for early cancer detection, brain tumor diagnosis, and intraoperative tissue analysis. Unfortunately, optical imaging is vulnerable to image degradation due to laser scattering and absorption, which can result in diagnostic errors and misguided treatment. Restoration of optical images is a challenging computer vision task because the sources of image degradation are multi-factorial, stochastic, and tissue-dependent, preventing a straightforward method to obtain paired low-quality/high-quality data. Here, we present Restorative Step-Calibrated Diffusion (RSCD), an unpaired diffusion-based image restoration method that uses a step calibrator model to dynamically determine the number of steps required to complete the reverse diffusion process for image restoration. RSCD outperforms other widely used unpaired image restoration methods on both image quality and perceptual evaluation metrics for restoring optical images. Medical imaging experts consistently prefer images restored using RSCD in blinded comparison experiments and report minimal to no hallucinations. Finally, we show that RSCD improves performance on downstream clinical imaging tasks, including automated brain tumor diagnosis and deep tissue imaging. Our code is available at https://github.com/MLNeurosurg/restorative_step-calibrated_diffusion.

高质量、高分辨率的医学成像对临床护理至关重要。基于拉曼的生物医学光学成像利用非电离红外辐射对人体组织进行实时评估,用于早期癌症检测、脑肿瘤诊断和术中组织分析。不幸的是,由于激光的散射和吸收,光学成像容易受到图像退化的影响,这可能导致诊断错误和错误的治疗。光学图像的恢复是一项具有挑战性的计算机视觉任务,因为图像退化的来源是多因素的、随机的和组织相关的,这使得无法直接获得成对的低质量/高质量数据。在这里,我们提出了恢复性步长校准扩散(RSCD),这是一种基于非配对扩散的图像恢复方法,它使用步长校准器模型来动态确定完成图像恢复的反向扩散过程所需的步数。RSCD在恢复光学图像的图像质量和感知评价指标上优于其他广泛使用的非配对图像恢复方法。医学成像专家一直喜欢在盲法比较实验中使用RSCD恢复图像,并报告很少或没有幻觉。最后,我们发现RSCD提高了下游临床成像任务的性能,包括自动脑肿瘤诊断和深部组织成像。我们的代码可在https://github.com/MLNeurosurg/restorative_step-calibrated_diffusion上获得。
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引用次数: 0
Denoising Diffusion Variational Inference: Diffusion Models as Expressive Variational Posteriors. 去噪扩散变分推理:作为表达变分后验的扩散模型。
Pub Date : 2025-01-01 Epub Date: 2025-04-11 DOI: 10.1609/aaai.v39i19.34194
Wasu Top Piriyakulkij, Yingheng Wang, Volodymyr Kuleshov

We propose denoising diffusion variational inference (DDVI), a black-box variational inference algorithm for latent variable models which relies on diffusion models as flexible approximate posteriors. Specifically, our method introduces an expressive class of diffusion-based variational posteriors that perform iterative refinement in latent space; we train these posteriors with a novel regularized evidence lower bound (ELBO) on the marginal likelihood inspired by the wake-sleep algorithm. Our method is easy to implement (it fits a regularized extension of the ELBO), is compatible with black-box variational inference, and outperforms alternative classes of approximate posteriors based on normalizing flows or adversarial networks. We find that DDVI improves inference and learning in deep latent variable models across common benchmarks as well as on a motivating task in biology-inferring latent ancestry from human genomes-where it outperforms strong baselines on 1000 Genomes dataset.

本文提出了消噪扩散变分推理算法(DDVI),这是一种基于扩散模型作为灵活近似后后的隐变量模型黑盒变分推理算法。具体来说,我们的方法引入了一种表达性的基于扩散的变分后验,在潜在空间中进行迭代细化;我们用一种新的正则化证据下限(ELBO)来训练这些后验,该下限是由唤醒-睡眠算法启发的。我们的方法易于实现(它适合ELBO的正则化扩展),与黑盒变分推理兼容,并且优于基于归一化流或对抗网络的近似后置的替代类。我们发现,DDVI提高了深度潜在变量模型在通用基准上的推理和学习,以及在生物学中的激励任务上——从人类基因组推断潜在祖先——它优于1000个基因组数据集的强基线。
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引用次数: 0
A Deployed Online Reinforcement Learning Algorithm In An Oral Health Clinical Trial. 在口腔健康临床试验中部署在线强化学习算法。
Pub Date : 2025-01-01 Epub Date: 2025-04-11 DOI: 10.1609/aaai.v39i28.35143
Anna L Trella, Kelly W Zhang, Hinal Jajal, Inbal Nahum-Shani, Vivek Shetty, Finale Doshi-Velez, Susan A Murphy

Dental disease is a prevalent chronic condition associated with substantial financial burden, personal suffering, and increased risk of systemic diseases. Despite widespread recommendations for twice-daily tooth brushing, adherence to recommended oral self-care behaviors remains sub-optimal due to factors such as forgetfulness and disengagement. To address this, we developed Oralytics, a mHealth intervention system designed to complement clinician-delivered preventative care for marginalized individuals at risk for dental disease. Oralytics incorporates an online reinforcement learning algorithm to determine optimal times to deliver intervention prompts that encourage oral self-care behaviors. We have deployed Oralytics in a registered clinical trial. The deployment required careful design to manage challenges specific to the clinical trials setting in the U.S. In this paper, we (1) highlight key design decisions of the RL algorithm that address these challenges and (2) conduct a re-sampling analysis to evaluate algorithm design decisions. A second phase (randomized control trial) of Oralytics is planned to start in spring 2025.

牙病是一种普遍的慢性疾病,与巨大的经济负担、个人痛苦和系统性疾病风险增加有关。尽管人们普遍建议每天刷牙两次,但由于健忘和脱离接触等因素,坚持所建议的口腔自我保健行为仍然不是最佳选择。为了解决这个问题,我们开发了Oralytics,这是一种移动健康干预系统,旨在补充医生为有牙病风险的边缘人群提供的预防性护理。Oralytics采用在线强化学习算法来确定提供干预提示的最佳时间,以鼓励口腔自我保健行为。我们已经在一个注册的临床试验中部署了Oralytics。部署需要精心设计,以应对美国临床试验环境中的具体挑战。在本文中,我们(1)强调了RL算法解决这些挑战的关键设计决策,(2)进行重新抽样分析以评估算法设计决策。Oralytics的第二阶段(随机对照试验)计划于2025年春季开始。
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引用次数: 0
Learning Physics Informed Neural ODEs with Partial Measurements. 学习物理通知神经ode与部分测量。
Pub Date : 2025-01-01 Epub Date: 2025-04-11 DOI: 10.1609/aaai.v39i16.33846
Paul Ghanem, Ahmet Demirkaya, Tales Imbiriba, Alireza Ramezani, Zachary Danziger, Deniz Erdogmus

Learning dynamics governing physical and spatiotemporal processes is a challenging problem, especially in scenarios where states are partially measured. In this work, we tackle the problem of learning dynamics governing these systems when parts of the system's states are not measured, specifically when the dynamics generating the non-measured states are unknown. Inspired by state estimation theory and Physics Informed Neural ODEs, we present a sequential optimization framework in which dynamics governing unmeasured processes can be learned. We demonstrate the performance of the proposed approach leveraging numerical simulations and a real dataset extracted from an electro-mechanical positioning system. We show how the underlying equations fit into our formalism and demonstrate the improved performance of the proposed method when compared with baselines.

控制物理和时空过程的学习动态是一个具有挑战性的问题,特别是在状态被部分测量的情况下。在这项工作中,我们解决了当系统状态的部分未被测量时,特别是当产生非测量状态的动态未知时,学习动态控制这些系统的问题。受状态估计理论和物理通知神经ode的启发,我们提出了一个序列优化框架,其中可以学习控制未测量过程的动态。我们利用数值模拟和从机电定位系统中提取的真实数据集证明了所提出方法的性能。我们展示了底层方程如何符合我们的形式,并展示了与基线相比所提出方法的改进性能。
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引用次数: 0
Multimodal Variational Autoencoder: A Barycentric View. 多模态变分自编码器:以重心为中心的视图。
Pub Date : 2025-01-01 Epub Date: 2025-04-11 DOI: 10.1609/aaai.v39i19.34209
Peijie Qiu, Wenhui Zhu, Sayantan Kumar, Xiwen Chen, Jin Yang, Xiaotong Sun, Abolfazl Razi, Yalin Wang, Aristeidis Sotiras

Multiple signal modalities, such as vision and sounds, are naturally present in real-world phenomena. Recently, there has been growing interest in learning generative models, in particular variational autoencoder (VAE), for multimodal representation learning especially in the case of missing modalities. The primary goal of these models is to learn a modality-invariant and modality-specific representation that characterizes information across multiple modalities. Previous attempts at multimodal VAEs approach this mainly through the lens of experts, aggregating unimodal inference distributions with a product of experts (PoE), a mixture of experts (MoE), or a combination of both. In this paper, we provide an alternative generic and theoretical formulation of multimodal VAE through the lens of barycenter. We first show that PoE and MoE are specific instances of barycenters, derived by minimizing the asymmetric weighted KL divergence to unimodal inference distributions. Our novel formulation extends these two barycenters to a more flexible choice by considering different types of divergences. In particular, we explore the Wasserstein barycenter defined by the 2-Wasserstein distance, which better preserves the geometry of unimodal distributions by capturing both modality-specific and modality-invariant representations compared to KL divergence. Empirical studies on three multimodal benchmarks demonstrated the effectiveness of the proposed method.

多种信号模式,如视觉和声音,自然存在于现实世界的现象中。最近,人们对学习生成模型越来越感兴趣,特别是变分自编码器(VAE),用于多模态表示学习,特别是在缺少模态的情况下。这些模型的主要目标是学习一种模态不变的和特定于模态的表示,这种表示表征了跨多个模态的信息。以前对多模态VAEs的尝试主要是通过专家的视角来解决这个问题,用专家的产品(PoE)、专家的混合物(MoE)或两者的组合来聚合单模态推理分布。本文通过质心透镜给出了多模态VAE的另一种通用的理论表述。我们首先证明PoE和MoE是质心的特定实例,通过最小化非对称加权KL散度到单峰推理分布而得到。我们的新配方通过考虑不同类型的分歧,将这两个重心扩展为更灵活的选择。特别是,我们探索了由2-Wasserstein距离定义的Wasserstein质心,与KL散度相比,它通过捕获模态特定和模态不变表示更好地保留了单峰分布的几何形状。对三个多模态基准的实证研究证明了该方法的有效性。
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引用次数: 0
Contrastive Functional Principal Components Analysis. 对比功能主成分分析。
Pub Date : 2025-01-01 Epub Date: 2025-04-11 DOI: 10.1609/aaai.v39i21.34394
Eric Zhang, Didong Li

As functional data assumes a central role in contemporary data analysis, the search for meaningful dimension reduction becomes critical due to its inherent infinite-dimensional structure. Traditional methods, such as Functional Principal Component Analysis (FPCA), adeptly explore the overarching structures within the functional data. However, these methods may not sufficiently identify low-dimensional representations that are specific or enriched in a foreground dataset (case or treatment group) relative to a background dataset (control group). This limitation becomes critical in scenarios where the foreground dataset, such as a specific treatment group in biomedical applications, contains unique patterns or trends that are not as pronounced in the background dataset. Addressing this gap, we propose Contrastive Functional Principal Component Analysis (CFPCA), a method designed to spotlight low-dimensional structures unique to or enriched in the foreground dataset relative to the background counterpart. We supplement our method with theoretical guarantees on CFPCA estimates supported by multiple simulations. Through a series of applications, CFPCA successfully identifies these foreground-specific structures, thereby revealing distinct patterns and trends that traditional FPCA overlooks.

由于功能数据在当代数据分析中扮演着核心角色,由于其固有的无限维结构,寻找有意义的降维变得至关重要。传统的方法,如功能主成分分析(FPCA),熟练地探索功能数据中的总体结构。然而,这些方法可能无法充分识别相对于背景数据集(对照组),前景数据集(病例或治疗组)中特定或丰富的低维表示。这种限制在前景数据集(例如生物医学应用中的特定治疗组)包含独特模式或趋势的场景中变得至关重要,这些模式或趋势在背景数据集中不那么明显。为了解决这一问题,我们提出了对比功能主成分分析(CFPCA),这是一种旨在突出前景数据集中相对于背景数据集独特或丰富的低维结构的方法。我们补充了我们的方法,对CFPCA估计的理论保证得到了多个模拟的支持。通过一系列的应用,CFPCA成功地识别了这些前景特异性结构,从而揭示了传统FPCA忽略的独特模式和趋势。
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引用次数: 0
Tackling Intertwined Data and Device Heterogeneities in Federated Learning with Unlimited Staleness. 在具有无限过时性的联邦学习中处理交织的数据和设备异构性。
Pub Date : 2025-01-01 Epub Date: 2025-04-11 DOI: 10.1609/aaai.v39i20.35405
Haoming Wang, Wei Gao

Federated Learning (FL) can be affected by data and device heterogeneities, caused by clients' different local data distributions and latencies in uploading model updates (i.e., staleness). Traditional schemes consider these heterogeneities as two separate and independent aspects, but this assumption is unrealistic in practical FL scenarios where these heterogeneities are intertwined. In these cases, traditional FL schemes are ineffective, and a better approach is to convert a stale model update into a unstale one. In this paper, we present a new FL framework that ensures the accuracy and computational efficiency of this conversion, hence effectively tackling the intertwined heterogeneities that may cause unlimited staleness in model updates. Our basic idea is to estimate the distributions of clients' local training data from their uploaded stale model updates, and use these estimations to compute unstale client model updates. In this way, our approach does not require any auxiliary dataset nor the clients' local models to be fully trained, and does not incur any additional computation or communication overhead at client devices. We compared our approach with the existing FL strategies on mainstream datasets and models, and showed that our approach can improve the trained model accuracy by up to 25% and reduce the number of required training epochs by up to 35%. Source codes can be found at: https://github.com/pittisl/FL-with-intertwined-heterogeneity.

联邦学习(FL)可能会受到数据和设备异构性的影响,这是由客户端不同的本地数据分布和上传模型更新时的延迟(即过时)造成的。传统的方案将这些异构性视为两个独立的方面,但是这种假设在实际的FL场景中是不现实的,因为这些异构性是相互交织的。在这些情况下,传统的FL方案是无效的,更好的方法是将过时的模型更新转换为不过时的模型更新。在本文中,我们提出了一个新的FL框架,确保了这种转换的准确性和计算效率,从而有效地解决了可能导致模型更新无限过时的相互交织的异构性。我们的基本思想是从客户端上传的陈旧模型更新中估计其本地训练数据的分布,并使用这些估计来计算未陈旧的客户端模型更新。通过这种方式,我们的方法不需要任何辅助数据集,也不需要完全训练客户端的本地模型,并且不会在客户端设备上产生任何额外的计算或通信开销。我们将我们的方法与主流数据集和模型上现有的FL策略进行了比较,结果表明,我们的方法可以将训练模型的准确率提高高达25%,并将所需的训练epoch数量减少高达35%。源代码可以在https://github.com/pittisl/FL-with-intertwined-heterogeneity找到。
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引用次数: 0
MedAlign: A Clinician-Generated Dataset for Instruction Following with Electronic Medical Records. MedAlign:临床医生生成的电子医疗记录指令遵循数据集。
Pub Date : 2024-03-25 Epub Date: 2024-03-24 DOI: 10.1609/aaai.v38i20.30205
Scott L Fleming, Alejandro Lozano, William J Haberkorn, Jenelle A Jindal, Eduardo Reis, Rahul Thapa, Louis Blankemeier, Julian Z Genkins, Ethan Steinberg, Ashwin Nayak, Birju Patel, Chia-Chun Chiang, Alison Callahan, Zepeng Huo, Sergios Gatidis, Scott Adams, Oluseyi Fayanju, Shreya J Shah, Thomas Savage, Ethan Goh, Akshay S Chaudhari, Nima Aghaeepour, Christopher Sharp, Michael A Pfeffer, Percy Liang, Jonathan H Chen, Keith E Morse, Emma P Brunskill, Jason A Fries, Nigam H Shah

The ability of large language models (LLMs) to follow natural language instructions with human-level fluency suggests many opportunities in healthcare to reduce administrative burden and improve quality of care. However, evaluating LLMs on realistic text generation tasks for healthcare remains challenging. Existing question answering datasets for electronic health record (EHR) data fail to capture the complexity of information needs and documentation burdens experienced by clinicians. To address these challenges, we introduce MedAlign, a benchmark dataset of 983 natural language instructions for EHR data. MedAlign is curated by 15 clinicians (7 specialities), includes clinician-written reference responses for 303 instructions, and provides 276 longitudinal EHRs for grounding instruction-response pairs. We used MedAlign to evaluate 6 general domain LLMs, having clinicians rank the accuracy and quality of each LLM response. We found high error rates, ranging from 35% (GPT-4) to 68% (MPT-7B-Instruct), and 8.3% drop in accuracy moving from 32k to 2k context lengths for GPT-4. Finally, we report correlations between clinician rankings and automated natural language generation metrics as a way to rank LLMs without human review. MedAlign is provided under a research data use agreement to enable LLM evaluations on tasks aligned with clinician needs and preferences.

大型语言模型(llm)能够以人类水平的流利程度遵循自然语言指令,这表明医疗保健领域有许多机会可以减轻管理负担并提高护理质量。然而,评估法学硕士对现实文本生成任务的医疗保健仍然具有挑战性。现有的电子健康记录(EHR)数据问答数据集未能捕捉到临床医生所经历的信息需求和文件负担的复杂性。为了解决这些挑战,我们引入了MedAlign,这是一个包含983条自然语言指令的EHR数据基准数据集。MedAlign由15名临床医生(7个专业)策划,包括303个指示的临床医生书面参考回复,并提供276个纵向电子病历,用于基础指示-反应对。我们使用MedAlign来评估6个一般领域的LLM,让临床医生对每个LLM反应的准确性和质量进行排名。我们发现错误率很高,从35% (GPT-4)到68% (mpt - 7b - directive)不等,并且GPT-4从32k上下文长度移动到2k上下文长度的准确性下降了8.3%。最后,我们报告了临床医生排名和自动自然语言生成指标之间的相关性,作为一种无需人工审核的法学硕士排名方法。MedAlign是根据研究数据使用协议提供的,使LLM能够对符合临床医生需求和偏好的任务进行评估。
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引用次数: 0
Using Adaptive Bandit Experiments to Increase and Investigate Engagement in Mental Health. 利用适应性匪徒实验来提高和调查心理健康方面的参与度。
Pub Date : 2024-03-25 Epub Date: 2024-03-24 DOI: 10.1609/aaai.v38i21.30328
Harsh Kumar, Tong Li, Jiakai Shi, Ilya Musabirov, Rachel Kornfield, Jonah Meyerhoff, Ananya Bhattacharjee, Chris Karr, Theresa Nguyen, David Mohr, Anna Rafferty, Sofia Villar, Nina Deliu, Joseph Jay Williams

Digital mental health (DMH) interventions, such as text-message-based lessons and activities, offer immense potential for accessible mental health support. While these interventions can be effective, real-world experimental testing can further enhance their design and impact. Adaptive experimentation, utilizing algorithms like Thompson Sampling for (contextual) multi-armed bandit (MAB) problems, can lead to continuous improvement and personalization. However, it remains unclear when these algorithms can simultaneously increase user experience rewards and facilitate appropriate data collection for social-behavioral scientists to analyze with sufficient statistical confidence. Although a growing body of research addresses the practical and statistical aspects of MAB and other adaptive algorithms, further exploration is needed to assess their impact across diverse real-world contexts. This paper presents a software system developed over two years that allows text-messaging intervention components to be adapted using bandit and other algorithms while collecting data for side-by-side comparison with traditional uniform random non-adaptive experiments. We evaluate the system by deploying a text-message-based DMH intervention to 1100 users, recruited through a large mental health non-profit organization, and share the path forward for deploying this system at scale. This system not only enables applications in mental health but could also serve as a model testbed for adaptive experimentation algorithms in other domains.

数字心理健康(DMH)干预措施,如基于短信的课程和活动,为提供便捷的心理健康支持提供了巨大的潜力。虽然这些干预措施可能很有效,但真实世界的实验测试可以进一步加强其设计和影响。利用汤普森采样(Thompson Sampling)等算法对(上下文)多臂匪徒(MAB)问题进行自适应实验,可以实现持续改进和个性化。然而,目前仍不清楚这些算法何时能同时提高用户体验奖励,并促进适当的数据收集,使社会行为科学家能够以足够的统计信心进行分析。尽管越来越多的研究涉及到了 MAB 和其他自适应算法的实用性和统计方面,但仍需进一步探索,以评估它们在不同现实环境中的影响。本文介绍了一个历时两年开发的软件系统,该系统允许使用强盗算法和其他算法调整文本信息干预组件,同时收集数据,以便与传统的统一随机非适应性实验进行并排比较。我们通过向 1100 名用户部署基于文本信息的 DMH 干预来评估该系统,这些用户是通过一家大型心理健康非营利组织招募的,我们还分享了大规模部署该系统的前进之路。该系统不仅可以应用于心理健康领域,还可以作为自适应实验算法在其他领域的示范测试平台。
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引用次数: 0
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Proceedings of the ... AAAI Conference on Artificial Intelligence. AAAI Conference on Artificial Intelligence
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