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Grading of soft tissues sarcomas using radiomics models: Choice of imaging methods and comparison with conventional visual analysis 使用放射组学模型对软组织肉瘤进行分级:成像方法的选择以及与传统视觉分析的比较
Pub Date : 2022-06-01 DOI: 10.1016/j.redii.2022.100009
Bailiang Chen , Olivier Steinberger , Roman Fenioux , Quentin Duverger , Tryphon Lambrou , Gauthier Dodin , Alain Blum , Pedro Augusto Gondim Teixeira

Purpose

To determine which combination of imaging modalities/contrast, radiomics models, and how many features provides the best diagnostic performance for the differentiation between low- and high-grade soft tissue sarcomas (STS) using a radiomics approach.

Methods

MRI and CT from 39 patients with a histologically confirmed STS were prospectively analyzed. Images were evaluated both quantitatively by radiomics models and qualitatively by visual evaluation (used as reference) for grading (low-grade vs high-grade). In radiomics analysis, 120 radiomic features were extracted and contributed into three models: least absolute shrinkage and selection operator with logistic regression(LASSO-LR), recursive feature elimination and cross-validation (RFECV-SVC) and analysis of variance with SVC (ANOVA-SVC). Those were applied to different combinations of imaging modalities acquisition, with and without contrast medium administration, as well as selected number of features.

Results

Fat-saturated T2w (FS-T2w) MR images using RFECV-SVC radiomic models involving five features yielded the best results with mean sensitivity, specificity, and accuracy of 92% ± 10%, 78% ± 30%, and 89% ± 12%, respectively. The performance of radiomics was better than that of conventional analysis (67% accuracy) for STS grading. Combination of multiple contrast or imaging modalities did not increase the diagnostic performance.

Conclusion

FS-T2w MR images alone with a five-feature radiomics analysis usingh REFCV-SVC model may be able to provide sufficient diagnositic performance compared to conventional visual evaluation with multiple MRI contrast and CT imaging.

目的利用放射组学方法确定哪种成像方式/对比、放射组学模型的组合,以及有多少特征可以为区分低级别和高级别软组织肉瘤(STS)提供最佳的诊断性能。方法对39例经组织学证实的STS患者的smri和CT进行前瞻性分析。通过放射组学模型对图像进行定量评价,并通过视觉评价(作为参考)对图像进行定性评分(低级别vs高级别)。在放射组学分析中,提取120个放射组学特征并将其贡献到三个模型中:最小绝对收缩和逻辑回归选择算子(LASSO-LR),递归特征消除和交叉验证(RFECV-SVC)和方差分析与SVC (ANOVA-SVC)。这些应用于不同的成像方式组合,有或没有造影剂管理,以及选择的特征数量。结果脂肪饱和T2w (FS-T2w) MR图像采用RFECV-SVC放射学模型,包括5个特征,获得最佳结果,平均灵敏度、特异性和准确性分别为92%±10%、78%±30%和89%±12%。放射组学在STS分级中的表现优于传统分析(准确率为67%)。多种对比或成像方式的组合并没有提高诊断性能。结论fs - t2w MR影像单独结合REFCV-SVC模型的五特征放射组学分析,与常规的MRI多造影和CT影像的视觉评价相比,可以提供足够的诊断效果。
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引用次数: 1
Investigating of the role of CT scan for cancer patients during the first wave of COVID-19 pandemic CT扫描在第一波COVID-19大流行中对癌症患者的作用探讨
Pub Date : 2022-03-01 DOI: 10.1016/j.redii.2022.100004
Sylvain Bourdoncle , Thomas Eche , Jeremy McGale , Kevin Yiu , Ephraïm Partouche , Randy Yeh , Samy Ammari , Hervé Rousseau , Laurent Dercle , Fatima-Zohra Mokrane

Introduction

Amidst this current COVID-19 pandemic, we undertook this systematic review to determine the role of medical imaging, with a special emphasis on computed tomography (CT), on guiding the care and management of oncologic patients.

Material and Methods

Study selection focused on articles from 01/02/2020 to 04/23/2020. After removal of irrelevant articles, all systematic or non-systematic reviews, comments, correspondence, editorials, guidelines and meta-analysis and case reports with less than 5 patients were also excluded. Full-text articles of eligible publications were reviewed to select all imaging-based publications, and the existence or not of an oncologic population was reported for each publication. Two independent reviewers collected the following information: ( 1) General publication data; (2) Study design characteristics; (3) Demographic, clinical and pathological variables with percentage of cancer patients if available; (4) Imaging performances. The sensitivity and specificity of chest CT (C-CT) were pooled separately using a random-effects model. The positive predictive value (PPV) and negative predictive value (NPV) of C-CT as a test was estimated for a wide range of disease prevalence rates.

Results

A total of 106 publications were fully reviewed. Among them, 96 were identified to have extractable data for a two-by-two contingency table for CT performance. At the end, 53 studies (including 6 that used two different populations) were included in diagnosis accuracy analysis (N = 59). We identified 53 studies totaling 11,352 patients for whom the sensitivity (95CI) was 0.886 (0.880; 0.894), while specificity remained low: in 93% of cases (55/59), specificity was ≤ 0.5. Among all the 106 reviewed studies, only 7 studies included oncologic patients and were included in the final analysis for C-CT performances. The percentage of patients with cancer in these studies was 0.3% (34/11352 patients), lower than the global prevalence of cancer. Among all these studies, only 1 (0.9%, 1/106) reported performance specifically in a cohort of cancer patients, but it however only reported true positives.

Discussion

There is a concerning lack of COVID-19 studies involving oncologic patients, showing there is a real need for further investigation and evaluation of the performance of the different medical imaging modalities in this specific patient population.

在当前的COVID-19大流行中,我们进行了这项系统综述,以确定医学成像的作用,特别强调计算机断层扫描(CT)在指导肿瘤患者的护理和管理方面的作用。材料和方法研究选择集中于2020年2月1日至2020年4月23日的文章。删除不相关文章后,所有少于5例患者的系统或非系统评价、评论、通信、社论、指南、meta分析和病例报告也被排除。对符合条件的出版物的全文文章进行审查,以选择所有基于成像的出版物,并报告每个出版物是否存在肿瘤人群。两位独立审稿人收集了以下信息:(1)一般出版数据;(2)研究设计特点;(3)人口学、临床和病理变量,如有可能,包括癌症患者的百分比;(4)影像性能。采用随机效应模型将胸部CT (C-CT)的敏感性和特异性分别汇总。C-CT的阳性预测值(PPV)和阴性预测值(NPV)作为一种测试估计了广泛的疾病患病率。结果共审阅了106篇文献。其中,96个被确定具有可提取的数据,用于2乘2的CT性能列联表。最终,53项研究(其中6项使用了两个不同的人群)被纳入诊断准确性分析(N = 59)。我们纳入了53项研究,共11,352例患者,其敏感性(95CI)为0.886 (0.880;0.894),但特异性较低,93%(55/59)的病例特异性≤0.5。在106项研究中,只有7项研究纳入了肿瘤患者,并被纳入C-CT表现的最终分析。在这些研究中,癌症患者的百分比为0.3%(34/11352例),低于全球癌症患病率。在所有这些研究中,只有1项(0.9%,1/106)报告了特定癌症患者队列的表现,但仅报告了真阳性。令人担忧的是,目前缺乏涉及肿瘤患者的COVID-19研究,这表明确实需要进一步调查和评估不同医学成像方式在这一特定患者群体中的表现。
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引用次数: 3
Quantitative and qualitative evaluation of liver metastases with intraprocedural cone beam CT prior to transarterial radioembolization as a predictor of treatment response 经动脉放射栓塞前用术中锥形束CT定量和定性评价肝转移作为治疗反应的预测因子
Pub Date : 2022-03-01 DOI: 10.1016/j.redii.2022.100005
Florian Messmer MD , Juliana Zgraggen , Adrian Kobe MD , Lyubov Chaykovska MD , Gilbert Puippe MD , Caecilia S. Reiner MD , Thomas Pfammatter MD

Purpose

To investigate, by quantitative and qualitative enhancement measurements, the correlation between tumor enhancement on cone beam computed tomography (CBCT) images and treatment response at 6 months in patients undergoing transarterial radioembolization (TARE) for liver metastases.

Materials and Methods

36 patients (56% male; median age 62.5 years) with 104 metastases were retrospectively included. Quantitative and qualitative enhancement of liver metastases were evaluated on CBCT images before TARE. Quantitative analysis consisted of lesion enhancement measurements (ROI HU lesion – ROI HU relative to inferior vena cava). Qualitative analysis consisted of subjective enhancement pattern analysis (diffuse, sparse, rim-like or non-enhancing). Morphologic tumor response was evaluated according to RECIST 1.1 criteria on follow-up CT or MR imaging.

Results

At a mean follow up of 6.5 ± 3.7 months, progressive disease (PD) was found in 4 patients, partial response (PR) in 11 and stable disease (SD) in 21. Relative lesion enhancement was significantly different between these groups (-37.5±154.2 HU vs. 103.8±93.4 vs. 181±144 HU in PD vs. SD vs. PR group, respectively; p<0.01). ROC analysis of relative lesion enhancement to predict progressive disease showed an area under the curve of 0.86 (p<0.01). For qualitative lesion enhancement analysis, no difference between groups was found.

Conclusion

Quantitative enhancement measurements derived from intraprocedural contrast enhanced CBCT may identify responders to TARE in patients with liver metastases.

目的通过定量和定性增强测量,探讨经动脉放射栓塞(TARE)治疗肝转移患者6个月时锥形束计算机断层扫描(CBCT)图像肿瘤增强与治疗效果的相关性。材料与方法36例患者(男性56%;中位年龄62.5岁),回顾性纳入104例转移灶。通过TARE前的CBCT图像评估肝转移的定量和定性增强。定量分析包括病变增强测量(ROI HU病变- ROI HU相对于下腔静脉)。定性分析包括主观增强模式分析(弥漫性、稀疏性、边缘型或非增强)。根据RECIST 1.1标准对随访的CT或MR影像进行肿瘤形态反应评价。结果平均随访6.5±3.7个月,病情进展(PD) 4例,部分缓解(PR) 11例,病情稳定(SD) 21例。PD组、SD组、PR组相对病灶增强程度差异显著(分别为-37.5±154.2 HU、103.8±93.4 HU、181±144 HU);术中,0.01)。相对病灶增强预测疾病进展的ROC分析显示曲线下面积为0.86 (p<0.01)。在定性病灶增强分析中,两组间无差异。结论术中增强CBCT的定量增强测量可以识别肝转移患者对TARE的反应。
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引用次数: 0
Value and prognostic impact of a deep learning segmentation model of COVID-19 lung lesions on low-dose chest CT 基于深度学习分割模型的COVID-19肺部病变在低剂量胸部CT上的价值及对预后的影响
Pub Date : 2022-03-01 DOI: 10.1016/j.redii.2022.100003
Axel Bartoli MD , Joris Fournel , Arnaud Maurin MD , Baptiste Marchi MD , Paul Habert MD , Maxime Castelli MD , Jean-Yves Gaubert MD , Sebastien Cortaredona MD , Jean-Christophe Lagier MD, PhD , Matthieu Million MD, PhD , Didier Raoult MD, PhD , Badih Ghattas MCU , Alexis Jacquier MD, PhD

Objectives

1) To develop a deep learning (DL) pipeline allowing quantification of COVID-19 pulmonary lesions on low-dose computed tomography (LDCT). 2) To assess the prognostic value of DL-driven lesion quantification.

Methods

This monocentric retrospective study included training and test datasets taken from 144 and 30 patients, respectively. The reference was the manual segmentation of 3 labels: normal lung, ground-glass opacity(GGO) and consolidation(Cons). Model performance was evaluated with technical metrics, disease volume and extent. Intra- and interobserver agreement were recorded. The prognostic value of DL-driven disease extent was assessed in 1621 distinct patients using C-statistics. The end point was a combined outcome defined as death, hospitalization>10 days, intensive care unit hospitalization or oxygen therapy.

Results

The Dice coefficients for lesion (GGO+Cons) segmentations were 0.75±0.08, exceeding the values for human interobserver (0.70±0.08; 0.70±0.10) and intraobserver measures (0.72±0.09). DL-driven lesion quantification had a stronger correlation with the reference than inter- or intraobserver measures. After stepwise selection and adjustment for clinical characteristics, quantification significantly increased the prognostic accuracy of the model (0.82 vs. 0.90; p<0.0001).

Conclusions

A DL-driven model can provide reproducible and accurate segmentation of COVID-19 lesions on LDCT. Automatic lesion quantification has independent prognostic value for the identification of high-risk patients.

目的1)建立一种深度学习(DL)管道,用于在低剂量计算机断层扫描(LDCT)上量化COVID-19肺部病变。2)评价dl驱动病变量化的预后价值。方法本单中心回顾性研究包括144例和30例患者的训练和测试数据集。参照手工分割3个标签:正常肺、磨玻璃不透明(GGO)和实变(Cons)。用技术指标、疾病量和程度评价模型的性能。记录了观察员内部和观察员之间的一致意见。采用C-statistics对1621例不同类型患者的dl驱动病变程度进行预后评估。终点是一个综合结果,定义为死亡、住院10天、重症监护病房住院或氧气治疗。结果病变(GGO+ con)分割的Dice系数为0.75±0.08,超过了人类观察者间的数值(0.70±0.08;0.70±0.10)和观察者内测量值(0.72±0.09)。dl驱动的病变量化与参考的相关性比观察者间或观察者内测量的相关性更强。在逐步选择和调整临床特征后,量化显著提高了模型的预后准确性(0.82 vs 0.90;术中,0.0001)。结论dl驱动模型可在LDCT上对COVID-19病变进行可重复、准确的分割。病变自动量化对高危患者的识别具有独立的预后价值。
{"title":"Value and prognostic impact of a deep learning segmentation model of COVID-19 lung lesions on low-dose chest CT","authors":"Axel Bartoli MD ,&nbsp;Joris Fournel ,&nbsp;Arnaud Maurin MD ,&nbsp;Baptiste Marchi MD ,&nbsp;Paul Habert MD ,&nbsp;Maxime Castelli MD ,&nbsp;Jean-Yves Gaubert MD ,&nbsp;Sebastien Cortaredona MD ,&nbsp;Jean-Christophe Lagier MD, PhD ,&nbsp;Matthieu Million MD, PhD ,&nbsp;Didier Raoult MD, PhD ,&nbsp;Badih Ghattas MCU ,&nbsp;Alexis Jacquier MD, PhD","doi":"10.1016/j.redii.2022.100003","DOIUrl":"10.1016/j.redii.2022.100003","url":null,"abstract":"<div><h3>Objectives</h3><p>1) To develop a deep learning (DL) pipeline allowing quantification of COVID-19 pulmonary lesions on low-dose computed tomography (LDCT). 2) To assess the prognostic value of DL-driven lesion quantification.</p></div><div><h3>Methods</h3><p>This monocentric retrospective study included training and test datasets taken from 144 and 30 patients, respectively. The reference was the manual segmentation of 3 labels: normal lung, ground-glass opacity(GGO) and consolidation(Cons). Model performance was evaluated with technical metrics, disease volume and extent. Intra- and interobserver agreement were recorded. The prognostic value of DL-driven disease extent was assessed in 1621 distinct patients using C-statistics. The end point was a combined outcome defined as death, hospitalization&gt;10 days, intensive care unit hospitalization or oxygen therapy.</p></div><div><h3>Results</h3><p>The Dice coefficients for lesion (GGO+Cons) segmentations were 0.75±0.08, exceeding the values for human interobserver (0.70±0.08; 0.70±0.10) and intraobserver measures (0.72±0.09). DL-driven lesion quantification had a stronger correlation with the reference than inter- or intraobserver measures. After stepwise selection and adjustment for clinical characteristics, quantification significantly increased the prognostic accuracy of the model (0.82 vs. 0.90; <em>p</em>&lt;0.0001).</p></div><div><h3>Conclusions</h3><p>A DL-driven model can provide reproducible and accurate segmentation of COVID-19 lesions on LDCT. Automatic lesion quantification has independent prognostic value for the identification of high-risk patients.</p></div>","PeriodicalId":74676,"journal":{"name":"Research in diagnostic and interventional imaging","volume":"1 ","pages":"Article 100003"},"PeriodicalIF":0.0,"publicationDate":"2022-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8939894/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9909529","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Abdominal imaging in ICU patients with viral pneumonia: Are findings in COVID-19 patients really different from those observed with non-SARS-CoV-2 viral pneumonia? 病毒性肺炎ICU患者的腹部影像学:COVID-19患者与非sars - cov -2病毒性肺炎患者的发现是否真的不同?
Pub Date : 2022-03-01 DOI: 10.1016/j.redii.2022.01.001
Edouard Reizine , Sebastien Mule , Nicolas De Prost , Nicolas Mongardon , Jean-François Deux , Hicham Kobeiter , Alain Luciani

Purpose

To evaluate and compare the prevalence and type of abdominal involvements identified on CT scans in COVID-19 critically ill patients to those observed in critically ill patients with non-SARS-CoV-2 viral pneumonia.

Methods

Monocentric IRB approved retrospective study comparing all abdominal CT scans performed for patients admitted in the ICU with COVID-19 and those performed in a historical cohort of ICU patients with non-SARS-CoV-2 viral pneumonia. For each patient, gallbladder abnormality, acute pancreatitis signs, acute adrenal infarction, renal infarcts, bowel wall thickening and CT scan signs of bowel ischemia were assessed. Results were then compared between critically ill COVID-19 and non-COVID-19 patients (Chi-2 or Fisher exact tests for categorical data and Student t-test or Mann-Whitney U test for continuous data as appropriate).

Results

Ninety-nine COVID-19 patients and 45 non-COVID-19 patients were included.

No difference was found between the rate of abnormal findings comparing COVID-19 patients and patients with other viral pneumonia (63/99 [64%] vs 27/45 [61%], p=0.94). Acute pancreatitis signs were more commonly seen in COVID-19 patients but without statistically difference between groups (14/99 [14%] vs 3/45 [6.7%], p=0.31). Bowel wall thickening was slightly more commonly seen in patients with other viral pneumonia (18/99 [18%] vs 11/45 [24%], p=0.52), however ischemic features were observed in higher rate in the COVID-19 group, although without reaching statistically significant differences (7/99 [7.1%] vs 2/45 [4.4%], p=0.75).

Conclusion

The rate and severity of abdominal involvement demonstrated by CT in ICU patients hospitalized for COVID-19 although high were not different to that observed in patients with other severe viral pneumoniae

目的评价和比较COVID-19危重症患者与非sars - cov -2病毒性肺炎危重症患者CT扫描发现的腹部受累的发生率和类型。方法采用单中心IRB批准的回顾性研究,比较ICU收治的COVID-19患者和非sars - cov -2病毒性肺炎ICU患者历史队列的所有腹部CT扫描。评估每位患者的胆囊异常、急性胰腺炎征象、急性肾上腺梗死、肾梗死、肠壁增厚及肠缺血的CT扫描征象。然后比较重症COVID-19和非COVID-19患者的结果(分类数据的Chi-2或Fisher精确检验,连续数据的学生t检验或Mann-Whitney U检验)。结果纳入COVID-19患者99例,非COVID-19患者45例。新冠肺炎患者与其他病毒性肺炎患者异常检出率差异无统计学意义(63/99 [64%]vs 27/45 [61%], p=0.94)。急性胰腺炎症状在COVID-19患者中更常见,但组间无统计学差异(14/99 [14%]vs 3/45 [6.7%], p=0.31)。肠壁增厚在其他病毒性肺炎患者中更为常见(18/99 [18%]vs 11/45 [24%], p=0.52),而缺血性特征在COVID-19组中发生率更高,但差异无统计学意义(7/99 [7.1%]vs 2/45 [4.4%], p=0.75)。结论新型冠状病毒肺炎住院ICU患者CT显示腹部受累率和严重程度虽高,但与其他重症病毒性肺炎患者无明显差异
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引用次数: 0
期刊
Research in diagnostic and interventional imaging
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