Pub Date : 2025-11-20DOI: 10.1186/s13568-025-01973-8
Lei Chen, Mingpeng Wang, Liangyue Cheng, Hao Luan
Many studies focus on optimizing the dark fermentative biohydrogen production. In the present work, static magnetic field (SMF) S pole and N pole were applied to the dark fermentation system of Clostridium pasteurianum to evaluate the effect of magnetic field direction on biohydrogen production process of Clostridium pasteurianum. The experimental results showed that the magnetic S pole application was more effective than the magnetic N pole application in improving microbial hydrogen production progress parameters. The maximum hydrogen production 2.47 ± 0.010 mol H2/mol glucose was achieved in the magnetic S pole application group. Meanwhile, the maximum biomass, carbon conversion efficiency and energy conversion efficiency in magnetic S pole application group were increased by 93%, 27.7% and 28.3%, respectively, compared with the control group. The results provided a new information for further exploring the application of magnetic field in dark fermentative biohydrogen production process.
{"title":"Kinetic analysis of fermentative hydrogen production by Clostridium pasteurianum under static magnetic field.","authors":"Lei Chen, Mingpeng Wang, Liangyue Cheng, Hao Luan","doi":"10.1186/s13568-025-01973-8","DOIUrl":"10.1186/s13568-025-01973-8","url":null,"abstract":"<p><p>Many studies focus on optimizing the dark fermentative biohydrogen production. In the present work, static magnetic field (SMF) S pole and N pole were applied to the dark fermentation system of Clostridium pasteurianum to evaluate the effect of magnetic field direction on biohydrogen production process of Clostridium pasteurianum. The experimental results showed that the magnetic S pole application was more effective than the magnetic N pole application in improving microbial hydrogen production progress parameters. The maximum hydrogen production 2.47 ± 0.010 mol H<sub>2</sub>/mol glucose was achieved in the magnetic S pole application group. Meanwhile, the maximum biomass, carbon conversion efficiency and energy conversion efficiency in magnetic S pole application group were increased by 93%, 27.7% and 28.3%, respectively, compared with the control group. The results provided a new information for further exploring the application of magnetic field in dark fermentative biohydrogen production process.</p>","PeriodicalId":7537,"journal":{"name":"AMB Express","volume":" ","pages":"184"},"PeriodicalIF":3.7,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12753619/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145562248","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study explores the microbial-assisted synthesis of nanoparticles from chalcopyrite ore and its tailings, emphasizing their potential applications in sustainable agriculture. Addressing the gap between research and practical field applications, the study employs microbial diversity to recover valuable elements as nanoparticles through green methods. Organic acids and metabolites produced by microorganisms facilitated the breakdown of mineral ores into nanoparticles. Optimal conditions (28 °C, pH 3.8) yielded nanoparticles (15-200 nm) after 72 h, as analysed by Dynamic Light Scattering and Scanning Electron Microscopy. Glycine encapsulation was confirmed via UV spectroscopy. In vitro experiments on Cicer arietinum (L.) demonstrated enhanced plant growth, including increased seed germination, branching, and early flowering, highlighting the potential of these nanoparticles in agricultural enhancement.
{"title":"Harnessing microbial diversity for nanoparticle synthesis from mineral ores: toward sustainable agriculture.","authors":"Rakesh Sharma, Shagun Sharma, Irshad Mohammad, Vaishnavi Singh, Gulshan Kumar Sharma, Vandana Nunia","doi":"10.1186/s13568-025-01887-5","DOIUrl":"10.1186/s13568-025-01887-5","url":null,"abstract":"<p><p>This study explores the microbial-assisted synthesis of nanoparticles from chalcopyrite ore and its tailings, emphasizing their potential applications in sustainable agriculture. Addressing the gap between research and practical field applications, the study employs microbial diversity to recover valuable elements as nanoparticles through green methods. Organic acids and metabolites produced by microorganisms facilitated the breakdown of mineral ores into nanoparticles. Optimal conditions (28 °C, pH 3.8) yielded nanoparticles (15-200 nm) after 72 h, as analysed by Dynamic Light Scattering and Scanning Electron Microscopy. Glycine encapsulation was confirmed via UV spectroscopy. In vitro experiments on Cicer arietinum (L.) demonstrated enhanced plant growth, including increased seed germination, branching, and early flowering, highlighting the potential of these nanoparticles in agricultural enhancement.</p>","PeriodicalId":7537,"journal":{"name":"AMB Express","volume":"15 1","pages":"170"},"PeriodicalIF":3.7,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12630504/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145547647","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Drug-resistant Pseudomonas aeruginosa poses a significant clinical challenge due to its intrinsic antibiotic resistance and the formation of metabolically dormant persister cells. Here, we evaluated the antibacterial and anti-persister activities of a novel 20-amino-acid cationic antimicrobial peptide (RRFFKKAAHVGKHVGKAARR) alone and in combination with silver nanoparticles (AgNPs) against P. aeruginosa PAO1. Minimum inhibitory concentrations (MICs) were determined by broth microdilution (128 µg/mL for the peptide; 8 µg/mL for AgNPs), and checkerboard assays revealed a strong synergistic interaction (fractional inhibitory concentration index (FICI) = 0.25). Treatment of colistin-induced persister populations with the peptide-AgNP combination reduced viable cells by 94.3 ± 2.1% (p < 0.01), markedly outperforming either agent alone. MTT assays in Caco-2 cells demonstrated > 85% viability at concentrations up to the MIC, indicating low host cytotoxicity. Mechanistic insights suggest that membrane disruption by the peptide, coupled with reactive oxygen species (ROS) generation and intracellular interference by AgNPs, underlies the enhanced eradication of both active and dormant bacterial cells. These findings support further in vivo investigation of AMP-AgNP co-therapy as a promising strategy to overcome antibiotic tolerance in P. aeruginosa.
{"title":"Synergistic effect of A novel antimicrobial peptide and silver nanoparticles against drug-resistant P. aeruginosa.","authors":"Abolfazl Eyni, Mehdi Goudarzi, Fatemeh Peyravii Ghadikolaii, Abbasali Dehpori, Saeed Soltani","doi":"10.1186/s13568-025-01979-2","DOIUrl":"10.1186/s13568-025-01979-2","url":null,"abstract":"<p><p>Drug-resistant Pseudomonas aeruginosa poses a significant clinical challenge due to its intrinsic antibiotic resistance and the formation of metabolically dormant persister cells. Here, we evaluated the antibacterial and anti-persister activities of a novel 20-amino-acid cationic antimicrobial peptide (RRFFKKAAHVGKHVGKAARR) alone and in combination with silver nanoparticles (AgNPs) against P. aeruginosa PAO1. Minimum inhibitory concentrations (MICs) were determined by broth microdilution (128 µg/mL for the peptide; 8 µg/mL for AgNPs), and checkerboard assays revealed a strong synergistic interaction (fractional inhibitory concentration index (FICI) = 0.25). Treatment of colistin-induced persister populations with the peptide-AgNP combination reduced viable cells by 94.3 ± 2.1% (p < 0.01), markedly outperforming either agent alone. MTT assays in Caco-2 cells demonstrated > 85% viability at concentrations up to the MIC, indicating low host cytotoxicity. Mechanistic insights suggest that membrane disruption by the peptide, coupled with reactive oxygen species (ROS) generation and intracellular interference by AgNPs, underlies the enhanced eradication of both active and dormant bacterial cells. These findings support further in vivo investigation of AMP-AgNP co-therapy as a promising strategy to overcome antibiotic tolerance in P. aeruginosa.</p>","PeriodicalId":7537,"journal":{"name":"AMB Express","volume":"15 1","pages":"171"},"PeriodicalIF":3.7,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12630409/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145556078","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-19DOI: 10.1186/s13568-025-01953-y
Mokhtar Saeed Rejili, Faouzi Haouala, Ahmed M Abdulfattah, Ahmad F Alhomodi, Majid Al-Zahrani, Sawsan Abd Ellatif, Elsayed E Hafez, Elsayed S Abdelrazik
{"title":"Antimicrobial and anti-cancer potential of turmeric synthesized AuNPs and Chitosan-AuNP nanocomposites against MDR pathogens and breast/colorectal carcinoma cells.","authors":"Mokhtar Saeed Rejili, Faouzi Haouala, Ahmed M Abdulfattah, Ahmad F Alhomodi, Majid Al-Zahrani, Sawsan Abd Ellatif, Elsayed E Hafez, Elsayed S Abdelrazik","doi":"10.1186/s13568-025-01953-y","DOIUrl":"10.1186/s13568-025-01953-y","url":null,"abstract":"","PeriodicalId":7537,"journal":{"name":"AMB Express","volume":" ","pages":"172"},"PeriodicalIF":3.7,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12634998/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145547716","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-07DOI: 10.1186/s13568-025-01972-9
Yifan Zhou, Jiabiao Liu, Zhenyu Wang, Chen Huang, Qingyun Wang, Xiaotong Yu, Cuixia Dai, Di Zhao, Yuchen Cai, Tianyu Wang
The mechanisms driving age-related macular degeneration (AMD) progression into two major but distinct vision-threatening subtypes, geographic atrophy (GA) and choroidal neovascularization (CNV), are unclear. This study identifies causal gut microbiota (GM) taxa involved in AMD and their connections to biological aging phenotypes, including epigenetic clock acceleration, telomere length, mitochondrial DNA copy number, 731 immune cell traits, and 91 inflammatory proteins through genetic prediction. Analyzing 207 GM taxa and 205 functional pathways alongside AMD progression GWAS data, we found that class_Gammaproteobacteria significantly influences both CNV and GA, and a bidirectional gut-retina axis involving Erysipelotrichaceae was also identified. Genus_Flavonifractor, species_Ruminococcus_obeum, and species_Streptococcus_thermophilus may attenuate AMD progression. Mediation analysis revealed pathways linking Ruminococcus obeum to GA progression via SSC-A expression on CD4 + T cells, and a CNV-associated pathway mediated by CD33dim HLA-DR + CD11b- cell counts. This study provides novel genetic evidence linking GM to dynamic AMD progression, offering genetic insights for future experimental research and clinical strategies.
{"title":"Biological aging phenotypes mediate gut microbiota effects on age-related macular degeneration subtype progression: genetic causality by mendelian randomization and mediation analysis.","authors":"Yifan Zhou, Jiabiao Liu, Zhenyu Wang, Chen Huang, Qingyun Wang, Xiaotong Yu, Cuixia Dai, Di Zhao, Yuchen Cai, Tianyu Wang","doi":"10.1186/s13568-025-01972-9","DOIUrl":"10.1186/s13568-025-01972-9","url":null,"abstract":"<p><p>The mechanisms driving age-related macular degeneration (AMD) progression into two major but distinct vision-threatening subtypes, geographic atrophy (GA) and choroidal neovascularization (CNV), are unclear. This study identifies causal gut microbiota (GM) taxa involved in AMD and their connections to biological aging phenotypes, including epigenetic clock acceleration, telomere length, mitochondrial DNA copy number, 731 immune cell traits, and 91 inflammatory proteins through genetic prediction. Analyzing 207 GM taxa and 205 functional pathways alongside AMD progression GWAS data, we found that class_Gammaproteobacteria significantly influences both CNV and GA, and a bidirectional gut-retina axis involving Erysipelotrichaceae was also identified. Genus_Flavonifractor, species_Ruminococcus_obeum, and species_Streptococcus_thermophilus may attenuate AMD progression. Mediation analysis revealed pathways linking Ruminococcus obeum to GA progression via SSC-A expression on CD4 + T cells, and a CNV-associated pathway mediated by CD33dim HLA-DR + CD11b- cell counts. This study provides novel genetic evidence linking GM to dynamic AMD progression, offering genetic insights for future experimental research and clinical strategies.</p>","PeriodicalId":7537,"journal":{"name":"AMB Express","volume":"15 1","pages":"167"},"PeriodicalIF":3.7,"publicationDate":"2025-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12595188/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145457313","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-06DOI: 10.1186/s13568-025-01960-z
Omnia Karem M Riad, Heba Mohammed Refat M Selim, Sally T K Tohamy, Khaled M Aboshanab
Aflatoxin contamination of milk is a serious health concern. When animals ingested food contaminated with aflatoxin B1 (AFB1), it would be converted into aflatoxin M1 (AFM1) and secreted in the milk. This carcinogenic and hepatotoxic toxin could be overcome by biological methods. Therefore, this study aimed to assess the anti-aflatoxigenic effect of the probiotic Lactobacillus rhamnosus (L. rhamnosus) ATCC 7469, as well as its synbiotic combination with chitosan ZnO nanocomposite using ELISA. This is carried out by measuring AFM1 concentration in 90 milk samples, including 73 raw and 27 powdered milk samples. The average AFM1 concentration was 11.22 ± 11.31 and 10.62 ± 8.08 µg/kg, which exceeded the international regulatory limits for raw and powdered milk, respectively. All milk samples were treated with L. rhamnosus ATCC 7469 and a synbiotic combination of chitosan/ZnO nanocomposite and L. rhamnosus ATCC 7469. The results showed that the probiotic L. rhamnosus ATCC 7469, and the synbiotic combination significantly reduced the AFM1 concentration in milk (p value ≤ 0.05). The used probiotic bacteria showed binding to AFM1 from 10 to 83.8%, while the binding range increased to 34-92% after treating milk with the synbiotic combination. In conclusion, the biological treatment of milk using the probiotic, L. rhamnosus ATCC 7469, alone or in combination with chitosan/ZnO nanocomposite, is an efficient method for reducing the AFM1 concentration in milk. This study highlights the use of both metal nanoparticles (as a prebiotic) and probiotics, forming a synbiotic approach to control milk contamination with aflatoxins in the laboratory.
{"title":"Anti-aflatoxigenic effect of Lactobacillus rhamnosus and its synbiotic combination of chitosan/ZnO in milk.","authors":"Omnia Karem M Riad, Heba Mohammed Refat M Selim, Sally T K Tohamy, Khaled M Aboshanab","doi":"10.1186/s13568-025-01960-z","DOIUrl":"10.1186/s13568-025-01960-z","url":null,"abstract":"<p><p>Aflatoxin contamination of milk is a serious health concern. When animals ingested food contaminated with aflatoxin B1 (AFB1), it would be converted into aflatoxin M1 (AFM1) and secreted in the milk. This carcinogenic and hepatotoxic toxin could be overcome by biological methods. Therefore, this study aimed to assess the anti-aflatoxigenic effect of the probiotic Lactobacillus rhamnosus (L. rhamnosus) ATCC 7469, as well as its synbiotic combination with chitosan ZnO nanocomposite using ELISA. This is carried out by measuring AFM1 concentration in 90 milk samples, including 73 raw and 27 powdered milk samples. The average AFM1 concentration was 11.22 ± 11.31 and 10.62 ± 8.08 µg/kg, which exceeded the international regulatory limits for raw and powdered milk, respectively. All milk samples were treated with L. rhamnosus ATCC 7469 and a synbiotic combination of chitosan/ZnO nanocomposite and L. rhamnosus ATCC 7469. The results showed that the probiotic L. rhamnosus ATCC 7469, and the synbiotic combination significantly reduced the AFM1 concentration in milk (p value ≤ 0.05). The used probiotic bacteria showed binding to AFM1 from 10 to 83.8%, while the binding range increased to 34-92% after treating milk with the synbiotic combination. In conclusion, the biological treatment of milk using the probiotic, L. rhamnosus ATCC 7469, alone or in combination with chitosan/ZnO nanocomposite, is an efficient method for reducing the AFM1 concentration in milk. This study highlights the use of both metal nanoparticles (as a prebiotic) and probiotics, forming a synbiotic approach to control milk contamination with aflatoxins in the laboratory.</p>","PeriodicalId":7537,"journal":{"name":"AMB Express","volume":"15 1","pages":"165"},"PeriodicalIF":3.7,"publicationDate":"2025-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12592607/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145450665","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}