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Sequence, structural, and evolutionary analysis of prokaryotic ribosomal protein L11 methyltransferases. 原核核糖体蛋白L11甲基转移酶的序列、结构和进化分析。
Pub Date : 2000-01-01
J M Bujnicki

The Escherichia coli PrmA enzyme catalyzes methylation of the large ribosomal subunit protein L11. Database homology searches, multiple sequence alignment, and structure prediction allowed to dissect the primary structure of PrmA into two domains and assign putative functional or structural roles to invariant or highly conserved residues. Evolutionary relationships within the PrmA family were also analyzed. The topology of the branching order agrees to a large extent with the consensus phylogeny of Eubacteria, with the exception of beta and epsilon subdivisions of Proteobacteria, which most probably had their original prmA genes replaced by copies acquired via the lateral gene transfer from gamma-Proteobacteria and some close relative of the ancestor of gramnegative bacteria, respectively.

大肠杆菌PrmA酶催化大核糖体亚基蛋白L11的甲基化。数据库同源性搜索、多序列比对和结构预测允许将PrmA的初级结构分解为两个结构域,并将假定的功能或结构作用分配给不变或高度保守的残基。并对PrmA家族的进化关系进行了分析。分支顺序的拓扑结构在很大程度上与真细菌的共识系统发育一致,但变形菌门的β和epsilon分支除外,它们的原始prmA基因很可能分别被γ -变形菌门和革兰氏阴性菌祖先的一些近亲通过横向基因转移获得的拷贝所取代。
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引用次数: 0
Neutralisation of vacuolating activity of cytotoxin by serum antibodies of Helicobacter pylori infected patients. 幽门螺杆菌感染患者血清抗体中和细胞毒素空泡活性的研究。
Pub Date : 2000-01-01
G Gościniak, A Przondo-Mordarska, B Iwańczak, E Poniewierka

The study involved 196 H. pylori strains and 196 serum samples taken from the same patients. H. pylori strains were investigated for the production of vacuolating cytotoxin. Antibodies to the vacuolating cytotoxin produced by H. pylori were detected in the sera samples by neutralisation assay (on Intestine 407 cells) and ELISA. Of the 196 H. pylori strains tested, 80 (40.8%) were found to express vacuolating cytotoxic activity. The titres of vacuolating cytotoxic were ranged from 1:2 to 1:128. The vacuolating assay was positive in 37.1% strains isolated from children, and in 50% strains isolated from adults. Cytotoxin-positive H. pylori strains were found more frequently in duodenal ulcer (71%) than in chronic gastritis (35.2%) patients, and this difference was statistically significant p<0.05. Neutralising antibodies to vacuolating cytotoxin were present in 51% and 49% of the serum samples tested by neutralisation and ELISA, respectively. Duodenal ulcer patients had antibodies to vacuolating cytotoxin more frequently (p<0.05) than chronic gastritis patients. Antibodies to cytotoxin were detected in 100% of the serum samples from patients infected by cytotoxic H. pylori strains. This suggests that the presence of anticytotoxic antibodies in the serum samples may be regarded as a sensitive indicator of infection by cytotoxic H. pylori strains.

该研究涉及196种幽门螺杆菌菌株和取自同一患者的196份血清样本。研究了幽门螺杆菌菌株产生空泡细胞毒素的能力。通过中和试验(在407肠细胞上)和ELISA检测血清样品中幽门螺杆菌产生的空泡细胞毒素抗体。196株幽门螺杆菌中,80株(40.8%)表达空泡细胞毒活性。空泡细胞毒滴度为1:2 ~ 1:128。儿童分离株和成人分离株的空泡实验阳性率分别为37.1%和50%。细胞毒素阳性幽门螺杆菌在十二指肠溃疡患者中的检出率(71%)高于慢性胃炎患者(35.2%),差异有统计学意义p
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引用次数: 0
The effect of sewage sludge composting on the quantitative state of some groups of bacteria and fungi. 污泥堆肥对某些细菌和真菌种群数量状态的影响。
Pub Date : 2000-01-01
M Piontek, T B Nguyen

Analysis of the quantitative state of disease causing bacteria and of other microbic groups were done on the sewage sludge from a sewage treatment plant. The results of the analysis include the ammonifying bacteria, nitrifying and denitrifying bacteria. The general quantity of bacteria and fungi in a secondary dehydrated sludge, fermented secondary dehydrated sludge, and in composted secondary dehydrated sludge was deterinated. Composts were prepared from dehydrated secondary sludge with the addition of sawdust. Microbiological analysis of sewage sludge showed, that the quantities of the fecal coli bacteria were 6500; 220 and 150 cells per cm3 of the secondary dehydrated sludge, fermented secondary dehydrated sludge and composted dehydrated secondary sludge, respectively. The numbers of Salmonella were respectively 67.80; 6.48 and 6.60 cells per cm3. The general numbers of bacteria were 2.98 x 10(7); 2.79 x 10(7); 2.15 x 10(7) cells per cm3 of sludge. The cell numbers of fungi were: 6.20x 10(2); 19.60 x 10(2); 7.80 x 10(2) per cm3 of sludge. In the three types of sludge, the results show great numbers of the ammonifying, nitrifying and denitrifying bacteria. Of the analysed groups of bacteria, the highest numbers of cells were found for general bacteria; ammonifying and nitrifying bacteria were next in abundance; still fewer were the denitrifying bacteria. Fungi and pathogenic bacteria were the least numerous.

对某污水处理厂污水污泥中致病菌及其他微生物群的数量状况进行了分析。分析结果包括氨化菌、硝化菌和反硝化菌。测定了二次脱水污泥、发酵二次脱水污泥和堆肥二次脱水污泥中细菌和真菌的总数量。以脱水的二次污泥为原料,加入木屑制备堆肥。污水污泥微生物学分析表明,粪大肠杆菌数量为6500个;二次脱水污泥、发酵二次脱水污泥和堆肥脱水二次污泥分别为220和150个细胞/ cm3。沙门氏菌数分别为67.80个;每立方厘米6.48和6.60个细胞。细菌总数为2.98 × 10(7);2.79 × 10(7);2.15 × 10(7)细胞每cm3污泥。真菌细胞数为:6.20 × 10(2);19.60 × 10(2);每立方厘米污泥7.80 × 10(2)。结果表明,三种污泥中均存在大量的氨化、硝化和反硝化细菌。在分析的细菌群中,发现普通细菌的细胞数量最多;其次是氨化菌和硝化菌;反硝化细菌的数量更少。真菌和致病菌数量最少。
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引用次数: 0
Insertional knock-out of protein translocation systems common for Yersinia enterocolitica and Listeria monocytogenes. 小肠结肠炎耶尔森菌和单核增生李斯特菌常见的蛋白质易位系统的插入敲除。
Pub Date : 2000-01-01
J Wiśniewski, J Hrebenda, J Bielecki

To carry out efficient insertional mutagenesis in Listeria monocytogenes and to facilitate the characterisation of disrupted genes, a novel derivative of plasmid pACYC 184 was constructed, pLIV virA3, carrying a fragment from the virA region of the of Y. enterocolitica plasmid pYVe 0:9. After transformation of this plasmid into L. monocytogenes it was possible to select for its integration into the host DNA at 42 degrees C. Insertional mutants of L. monocytogenes obtained by using pLIV vector containing plasmid DNA fragments from Y. enterocolitica were constructed and are described.

为了对单核增生李斯特菌进行有效的插入诱变,并便于对被破坏的基因进行鉴定,我们构建了一种新的质粒pACYC 184的衍生物pLIV virA3,它携带了大肠杆菌质粒pYVe 0:9的病毒区片段。将该质粒转化为单核增生乳杆菌后,可以在42℃下选择其整合到宿主DNA中。利用含有大肠杆菌质粒DNA片段的pLIV载体构建并描述了单核增生乳杆菌的插入突变体。
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引用次数: 0
Heterologous encapsidation in transmission of plant viral particles by aphid vectors. 蚜虫载体传播植物病毒颗粒的异源包壳化研究。
Pub Date : 2000-01-01
J Syller

Recently, significant progress has been made in recognizing virus-aphid specificities and identifying the proteins involved in virus transmission by aphids. An essential role of the viral capsid protein in this process has been proved. Heterologous encapsidation between viruses in mixed infections may allow transmission by aphids of normally non-aphid-transmissible viruses or change virus-vector interactions. This review describes the most characteristic examples of the phenomenon. Recent findings regarding transmission by aphids of viroid encapsidated in the viral capsid protein, and of virus encapsidated in transgenic coat protein, are presented.

近年来,在识别病毒-蚜虫的特异性和鉴定蚜虫传播病毒的蛋白质方面取得了重大进展。病毒衣壳蛋白在这一过程中的重要作用已被证实。在混合感染中,病毒之间的异源封装可能允许蚜虫传播通常非蚜虫传播的病毒或改变病毒-载体的相互作用。这篇综述描述了这种现象最典型的例子。本文介绍了最近蚜虫传播被病毒衣壳蛋白封装的类病毒和被转基因外壳蛋白封装的病毒的研究结果。
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引用次数: 0
Staphylococcus cohnii--resident of hospital environment: cell-surface features and resistance to antibiotics. 柯氏葡萄球菌——医院环境中的居民:细胞表面特征和对抗生素的耐药性
Pub Date : 2000-01-01
E M Szewczyk, M Rózalska

Staphylococcus cohnii strains dominated in the environment of investigated hospitals. We isolated 420 strains of the species mainly from hospitals environments, but also from infants--Intensive Care Units patients, its medical staff and non-hospital environments. S. cohnii subspecies cohnii was seen to dominate (361 strains). Seventy seven percent of these strains expressed cell-surface hydrofobicity, most of them were slime producers (61%) and this feature was correlated with their methicillin resistance. Among S. cohnii ssp. cohnii strains isolated from ICU environment 90% were resistant to methicillin, 43% expressed high-level resistance to mupirocin and high percentages were resistant to many other antibiotics. These strains may constitute a dangerous reservoir of resistance genes in a hospital.

调查医院环境中以柯氏葡萄球菌为主。我们主要从医院环境中分离出420种菌株,但也从婴儿-重症监护病房患者,其医务人员和非医院环境中分离出。cohnii亚种占主导地位(361株)。77%的菌株表现出细胞表面疏水性,其中大多数是粘液产生者(61%),这一特征与它们对甲氧西林的耐药性有关。cohnii ssp.;ICU环境中分离的科氏杆菌90%对甲氧西林耐药,43%对莫匹罗星高水平耐药,对其他多种抗生素耐药的比例较高。这些菌株可能构成医院中危险的抗性基因储存库。
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引用次数: 0
Comparison of different protocols of MRC5 cell line permeabilization for detection of CMV IE antigens by flow cytometry. 流式细胞术检测CMV IE抗原的MRC5细胞系渗透不同方案的比较
Pub Date : 2000-01-01
J Siennicka

The usefulness of four different protocols of permeabilizing human fibroblast cells for detection of CMV immediate-early antigens by flow cytometry was investigated. Permeabilizing protocols employed methanol, methanol/acetone, paraformaldehyde/Triton and FACSPermeabilizing Solution (Becton Dickinson). The best parameters (separation between positive stained CMV infected cells and negative control and detection of infected cells) were achieved for paraformaldehyde/Triton and FACSPermeabilizing Solution (Becton Dickinson).

研究了四种不同方案的渗透人成纤维细胞对流式细胞术检测巨细胞病毒早期抗原的有效性。渗透方案采用甲醇、甲醇/丙酮、多聚甲醛/Triton和FACSPermeabilizing Solution (Becton Dickinson)。多聚甲醛/Triton和FACSPermeabilizing Solution (Becton Dickinson)获得了最佳参数(阳性染色的CMV感染细胞与阴性对照的分离和感染细胞的检测)。
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引用次数: 0
Effect of culture conditions of Pleurotus ostreatus (Fr.) Kumm. on cellulases complexes activity in post-cultivated substrates. 对平菇培养条件的影响。后培养底物中纤维素酶复合物活性的研究。
Pub Date : 2000-01-01
K J Chrapkowska, W Podyma

The aim of the presented research was to settle conditions and parameters of Pleurotus ostreatus (Fr.) Kumm. culture and to determine activity and yield of cellulase complexes biosynthesised by this mushroom on different substrates. Wheat straw sterilized by evaporation at temperature 58-60 degrees C during 48 hours was the first substrate. Wheat straw with Reynoutria japonica (Houtt) in 1:1 proportion, sterilized by irradiation (15 kGy), was the second, two-component, substrate. According to the obtained results it can be ascertained that P. ostreatus (Fr.) Kumm. grows and yields well on all kinds of substrates biosynthesising active cellulase complexes E.C. 3.2.1.4. glucohydrolases, both endo- and exogluconase, and E.C. 3.2.1.21. beta-glucosidase.

本文研究了平菇(Pleurotus ostreatus)的发酵条件和工艺参数。培养和测定这种蘑菇在不同底物上生物合成的纤维素酶复合物的活性和产量。在58 ~ 60℃蒸发灭菌48h的麦秸为第一底物。小麦秸秆经15 kGy辐照灭菌后,以1∶1的比例加入粳稻(Reynoutria japonica, Houtt)作为第二种双组分底物。根据所获得的结果,可以确定P. ostreatus (Fr.) Kumm。在各种底物上生长和产量良好,生物合成活性纤维素酶配合物E.C. 3.2.1.4。葡萄糖水解酶,包括内糖酶和外糖酶,以及E.C. 3.2.1.21。beta-glucosidase。
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引用次数: 0
Production of Aspergillus niger catalase under various stress conditions. 不同胁迫条件下黑曲霉过氧化氢酶的生产。
Pub Date : 2000-01-01
J Fiedurek

The conidia of Aspergillus niger were cultured under various stress conditions. The highest yield of catalase activity was obtained after addition 1.2 M NaCl to 6-h-old culture, which improved the activity of the enzyme by about 2.8-fold in comparison with the control medium without this depressor. A significantly lower increase (1.3- to 1.7-fold) in catalase activity was reached when spores were incubated under oxidative stress (100-200 mM H2O2) or at low pH (2 and 3). Respiratory activities in A. niger culture show important changes with the osmotic stress increase.

在不同的胁迫条件下培养黑曲霉的分生孢子。在6 h的培养基中添加1.2 M NaCl后,过氧化氢酶活性最高,比不添加该抑制剂的对照培养基提高了约2.8倍。在氧化胁迫(100-200 mM H2O2)或低pH(2和3)条件下培养孢子时,过氧化氢酶活性的增加幅度较低(1.3- 1.7倍)。黑曲霉培养的呼吸活性随着渗透胁迫的增加而发生重要变化。
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引用次数: 0
In vitro antibiotic susceptibility of Bacteroides fragilis strains isolated from excised appendix of patients with phlegmonous or gangrenous appendicitis. 痰化脓性或坏疽性阑尾炎患者切除阑尾分离的脆弱拟杆菌菌株的体外抗生素敏感性。
Pub Date : 2000-01-01
B Wójcik-Stojek, M Bulanda, G Martirosian, P Heczko, F Meisel-Mikołajczyk

Out of 34 studied after-appendectomy tissues of adult and child patients 86 different strains of anaerobes were isolated. The antibiotic susceptibility of 30 isolated B. fragilis strains was tested using E tests. All studied strains were sensitive to imipenem, clindamycin and penicillin/tazobactam. Sensitivity to penicillin and cefoxitin was variable among these strains. One strain resistant to metronidazole (MIC--256 mg/L) and 3 strains with increased MIC to metronidazole were detected. Most of isolated strains were beta-lactamase producers.

在34例阑尾切除术后成人和儿童患者的组织中分离出86株不同的厌氧菌。采用E法对30株脆弱芽孢杆菌进行药敏试验。所有菌株均对亚胺培南、克林霉素和青霉素/他唑巴坦敏感。这些菌株对青霉素和头孢西丁的敏感性各不相同。检测到1株对甲硝唑(MIC—256 mg/L)耐药,3株对甲硝唑MIC升高。大多数分离菌株为β -内酰胺酶产生菌。
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引用次数: 0
期刊
Acta microbiologica Polonica
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