Pub Date : 2024-08-29DOI: 10.1007/s10453-024-09835-9
S. Harish Kumar, T. C. Kanish
Indoor air pollution directly affects mortality and also morbidity; it is also a vital issue of concern for the majority of nations that are in their developing phase. Coal and biomass (crop waste, wood, dung, and charcoal) are the main household energy sources for approximately around three billion people worldwide. Additionally, as most persons spend nearly 80–90% of their time in an indoor environment regularly, indoor air quality has a vital and direct effect on both general health and productivity of them. Although outdated, air pollution monitoring is nevertheless a very important idea in daily life. The monitoring of air quality has been done using both conventional methods and the most advanced computing techniques. However, as everyone needs access to clean air, many advanced wireless technologies have been used and some of them are quite helpful in giving information related to real-time data on air quality. The main purpose of this study is to describe some advanced techniques and devices used to monitor indoor air pollution and some of the significant advancements which have been done in this research field.
{"title":"A review on indoor air quality monitoring system: a mechatronics approach","authors":"S. Harish Kumar, T. C. Kanish","doi":"10.1007/s10453-024-09835-9","DOIUrl":"10.1007/s10453-024-09835-9","url":null,"abstract":"<div><p>Indoor air pollution directly affects mortality and also morbidity; it is also a vital issue of concern for the majority of nations that are in their developing phase. Coal and biomass (crop waste, wood, dung, and charcoal) are the main household energy sources for approximately around three billion people worldwide. Additionally, as most persons spend nearly 80–90% of their time in an indoor environment regularly, indoor air quality has a vital and direct effect on both general health and productivity of them. Although outdated, air pollution monitoring is nevertheless a very important idea in daily life. The monitoring of air quality has been done using both conventional methods and the most advanced computing techniques. However, as everyone needs access to clean air, many advanced wireless technologies have been used and some of them are quite helpful in giving information related to real-time data on air quality. The main purpose of this study is to describe some advanced techniques and devices used to monitor indoor air pollution and some of the significant advancements which have been done in this research field.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"373 - 390"},"PeriodicalIF":2.2,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142205091","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-14DOI: 10.1007/s10453-024-09834-w
Alain Robichaud
Air pollution, aeroallergens, and weather conditions can worsen health symptoms such as asthma. While studying the impact of these factors, the use of weather types (WTs) rather than individual meteorological variables (such as temperature, relative humidity, wind, cloudiness, or precipitation) is more appropriate since it is holistic and integrative. Moreover, several studies have shown that the human body responds to WTs, rather than to individual meteorological variables. In this study, the use of Sheridan’s WTs is adopted and compared with a so-called “In-House” WTs. The analysis presented here deals with the links between asthma hospitalization and the synergy among air pollution, birch tree pollen and WTs. Knowing the daily WT in a region can provide valuable information for health planning and management of asthma hospitalization, emergency visits and sub-clinical symptoms in the population. This is because air pollution and birch pollen both occur within only a few specific WTs, such as the TROWAL (trough of warm air aloft) or tropical airmasses. These specific WTs need to be more scrutinized since, in Montreal, these are often linked with higher daily mean hospitalization. The findings of this study emphasize the importance of specific WTs in determining the maximum daily concentrations of ozone, fine particles, Betula pollen concentrations and health effects such as asthma hospitalization. Moreover, the use of data filters in the analysis (for temperature and total count of hospitalization) also reveals new insights in the complex nature of asthma disease and its relationship with environmental factors.
{"title":"Use of weather types to analyze the simultaneous abundance of ozone, PM2.5 and allergenic tree pollen: focusing on the potential impact on asthma hospitalization in Montreal, Canada","authors":"Alain Robichaud","doi":"10.1007/s10453-024-09834-w","DOIUrl":"https://doi.org/10.1007/s10453-024-09834-w","url":null,"abstract":"<p>Air pollution, aeroallergens, and weather conditions can worsen health symptoms such as asthma. While studying the impact of these factors, the use of weather types (WTs) rather than individual meteorological variables (such as temperature, relative humidity, wind, cloudiness, or precipitation) is more appropriate since it is holistic and integrative. Moreover, several studies have shown that the human body responds to WTs, rather than to individual meteorological variables. In this study, the use of Sheridan’s WTs is adopted and compared with a so-called “In-House” WTs. The analysis presented here deals with the links between asthma hospitalization and the synergy among air pollution, birch tree pollen and WTs. Knowing the daily WT in a region can provide valuable information for health planning and management of asthma hospitalization, emergency visits and sub-clinical symptoms in the population. This is because air pollution and birch pollen both occur within only a few specific WTs, such as the TROWAL (trough of warm air aloft) or tropical airmasses. These specific WTs need to be more scrutinized since, in Montreal, these are often linked with higher daily mean hospitalization. The findings of this study emphasize the importance of specific WTs in determining the maximum daily concentrations of ozone, fine particles, <i>Betula</i> pollen concentrations and health effects such as asthma hospitalization. Moreover, the use of data filters in the analysis (for temperature and total count of hospitalization) also reveals new insights in the complex nature of asthma disease and its relationship with environmental factors.</p>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"6 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-08-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142205092","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-03DOI: 10.1007/s10453-024-09833-x
Muhammad Imran Khan, Arshia Amin, Muhammad Tariq Khan, Hafsa Jabeen, Shafqat Rasul Chaudhry
Smog is a form of pollution composed of smoke and fog. It is one of the major environmental and public health problems in many urban areas around the world. Intriguingly, recent evidences have unveiled the potential link between smog and antimicrobial resistance (AMR). Smog can contribute to AMR through a complex and multifaceted set of mechanisms, including particulate matter (PM) which is found in smog, mediated transport of AMR microorganisms and genes, disruption of the respiratory microbiome, and modulation of host immune responses. Since the PM can lodge deeper in the lungs and harbors antibiotic resistance genes (ARGs), it should be considered that PM contributes to AMR toward the respiratory tract infections and other infections. PM can create conditions conducive to bacterial survival and growth in the respiratory system due to inflammation and immune suppression. PM2. 5 and PM10 have been associated with several respiratory system ailments due to their capability to penetrate inner areas. Moreover, PM can serve as a carrier for ARGs and other microbial components, aiding in their spread. This interaction may accelerate the development and spread of AMR. It is imperative to further unleash the mechanisms adopted by microbial extracellular DNA associated with the PM to envisage the potential health and environmental hazards. eDNA, for example, has been shown to contribute to the diversity and composition of microbiota associated with PM, such as bacteria, fungi, and viruses. This review focuses on PM, ARGs, and microbial eDNA as emerging environmental contaminants. A comprehensive analysis is conducted of the mechanisms and circumstances that contribute to its spread in diverse settings. Considering the current explosive increase in microbial resistance to the antibiotics, this also necessitates uncovering the underpinnings of the smog’s effect on AMR and developing effective strategies for mitigating these deleterious smog effects on health and environment.
烟雾是一种由烟和雾组成的污染形式。它是全球许多城市地区的主要环境和公共卫生问题之一。耐人寻味的是,最近的证据揭示了烟雾与抗菌药耐药性(AMR)之间的潜在联系。雾霾会通过一系列复杂而多方面的机制导致抗菌药物耐药性的产生,这些机制包括雾霾中的微粒物质(PM)、抗菌药物耐药性微生物和基因的介导运输、呼吸道微生物组的破坏以及宿主免疫反应的调节。由于可吸入颗粒物能深入肺部并携带抗生素耐药基因(ARGs),因此应考虑到可吸入颗粒物会导致呼吸道感染和其他感染的急性呼吸道感染。由于炎症和免疫抑制,可吸入颗粒物会为细菌在呼吸系统中的生存和生长创造有利条件。PM2.5 和 PM10 由于能够穿透内部区域,因此与多种呼吸系统疾病有关。此外,可吸入颗粒物可作为 ARGs 和其他微生物成分的载体,帮助它们扩散。这种相互作用可能会加速 AMR 的发展和传播。当务之急是进一步揭示与可吸入颗粒物相关的微生物胞外DNA所采用的机制,以设想潜在的健康和环境危害。例如,eDNA已被证明有助于提高与可吸入颗粒物相关的微生物群(如细菌、真菌和病毒)的多样性和组成。本综述侧重于作为新兴环境污染物的可吸入颗粒物、ARGs 和微生物 eDNA。文章全面分析了导致可吸入颗粒物在不同环境中扩散的机制和情况。考虑到目前微生物对抗生素的耐药性呈爆炸性增长,这也需要揭示烟雾对 AMR 产生影响的根本原因,并制定有效的策略来减轻烟雾对健康和环境的有害影响。
{"title":"Unveiling the hidden hazards of smog: health implications and antibiotic resistance in perspective","authors":"Muhammad Imran Khan, Arshia Amin, Muhammad Tariq Khan, Hafsa Jabeen, Shafqat Rasul Chaudhry","doi":"10.1007/s10453-024-09833-x","DOIUrl":"10.1007/s10453-024-09833-x","url":null,"abstract":"<div><p>Smog is a form of pollution composed of smoke and fog. It is one of the major environmental and public health problems in many urban areas around the world. Intriguingly, recent evidences have unveiled the potential link between smog and antimicrobial resistance (AMR). Smog can contribute to AMR through a complex and multifaceted set of mechanisms, including particulate matter (PM) which is found in smog, mediated transport of AMR microorganisms and genes, disruption of the respiratory microbiome, and modulation of host immune responses. Since the PM can lodge deeper in the lungs and harbors antibiotic resistance genes (ARGs), it should be considered that PM contributes to AMR toward the respiratory tract infections and other infections. PM can create conditions conducive to bacterial survival and growth in the respiratory system due to inflammation and immune suppression. PM2. 5 and PM10 have been associated with several respiratory system ailments due to their capability to penetrate inner areas. Moreover, PM can serve as a carrier for ARGs and other microbial components, aiding in their spread. This interaction may accelerate the development and spread of AMR. It is imperative to further unleash the mechanisms adopted by microbial extracellular DNA associated with the PM to envisage the potential health and environmental hazards. eDNA, for example, has been shown to contribute to the diversity and composition of microbiota associated with PM, such as bacteria, fungi, and viruses. This review focuses on PM, ARGs, and microbial eDNA as emerging environmental contaminants. A comprehensive analysis is conducted of the mechanisms and circumstances that contribute to its spread in diverse settings. Considering the current explosive increase in microbial resistance to the antibiotics, this also necessitates uncovering the underpinnings of the smog’s effect on AMR and developing effective strategies for mitigating these deleterious smog effects on health and environment.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"353 - 372"},"PeriodicalIF":2.2,"publicationDate":"2024-08-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141885610","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-25DOI: 10.1007/s10453-024-09830-0
N. D. Havis, J. Kaczmarek, M. Jedryczka, M. Hess, Z. Fang
{"title":"Correction to: Spore dispersal patterns of the ascomycete fungus Ramularia collo-cygni and their influence on disease epidemics","authors":"N. D. Havis, J. Kaczmarek, M. Jedryczka, M. Hess, Z. Fang","doi":"10.1007/s10453-024-09830-0","DOIUrl":"10.1007/s10453-024-09830-0","url":null,"abstract":"","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"469 - 469"},"PeriodicalIF":2.2,"publicationDate":"2024-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142413680","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-22DOI: 10.1007/s10453-024-09832-y
Asli Baysal, Sevilay Zora, Hasan Saygin
In the last decade, a great deal of research has focused on the determination of potential toxic elements by total concentration and identification the microorganisms in dust. However, determining bio-relevant (e.g., inhalable) forms of elements instead of total contents in acids is necessary for human health. Moreover, examination of the behavior of microorganism under these bio-relevant conditions and revealing the interaction between elements and pathogens is vital and necessary for deeper understanding. However, previous studies have ignored these topics. Therefore, the present study aimed to (i) investigate elements in household dusts extracted in simulated lung fluids, (ii) examine the total concentration of culturable bacteria and their biochemical responses with exposure to bio-fractions of household dusts, and (iii) assess their relations and risks using the model approaches by inhalation. Here, settled dusts were collected in 25 houses, and extracted in four simulated body fluids to determine bio-fractions of elements. Moreover, total count of potentially pathogenic and heterotrophic bacteria, and four clinically important culturable pathogens were incubated in the presence of household-dusts extracted in simulated body fluids. The activity, biofilm, biochemical and oxidative responses of pathogens were measured following household-dust exposures. Afterward, the relationship between elements and pathogen responses were evaluated, and model and derived approaches were used for risk assessments of elements and pathogens. The higher daily intake of elements obtained in artificial lysosomal fluid fraction of household dust mimicking the inflammatory condition compared to other body fluids. Moreover, bacterial responses were mainly influenced from bio-fractions of household dusts and their elemental contents.
{"title":"Elemental composition of household dusts extracted in simulated body fluids and their impact on culturable pathogenic bacteria responses","authors":"Asli Baysal, Sevilay Zora, Hasan Saygin","doi":"10.1007/s10453-024-09832-y","DOIUrl":"10.1007/s10453-024-09832-y","url":null,"abstract":"<div><p>In the last decade, a great deal of research has focused on the determination of potential toxic elements by total concentration and identification the microorganisms in dust. However, determining bio-relevant (e.g., inhalable) forms of elements instead of total contents in acids is necessary for human health. Moreover, examination of the behavior of microorganism under these bio-relevant conditions and revealing the interaction between elements and pathogens is vital and necessary for deeper understanding. However, previous studies have ignored these topics. Therefore, the present study aimed to (i) investigate elements in household dusts extracted in simulated lung fluids, (ii) examine the total concentration of culturable bacteria and their biochemical responses with exposure to bio-fractions of household dusts, and (iii) assess their relations and risks using the model approaches by inhalation. Here, settled dusts were collected in 25 houses, and extracted in four simulated body fluids to determine bio-fractions of elements. Moreover, total count of potentially pathogenic and heterotrophic bacteria, and four clinically important culturable pathogens were incubated in the presence of household-dusts extracted in simulated body fluids. The activity, biofilm, biochemical and oxidative responses of pathogens were measured following household-dust exposures. Afterward, the relationship between elements and pathogen responses were evaluated, and model and derived approaches were used for risk assessments of elements and pathogens. The higher daily intake of elements obtained in artificial lysosomal fluid fraction of household dust mimicking the inflammatory condition compared to other body fluids. Moreover, bacterial responses were mainly influenced from bio-fractions of household dusts and their elemental contents.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"447 - 468"},"PeriodicalIF":2.2,"publicationDate":"2024-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-024-09832-y.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141743634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-09DOI: 10.1007/s10453-024-09831-z
Ioanna Pyrri, Nicolas Bruffaerts, Marko Radovic, Elizabet D’hooge, Ljiljana Janjusevic, Branko Sikoparija
Airborne fungal spores of the genus Alternaria pose challenges for accurate airborne spore identification by automatic bioaerosol monitors, because of their significant implications for public health and agriculture due to their role as airborne allergen and plant pathogen. These systems require high-quality reference data for training algorithms by machine learning. Alternaria alternata was cultured on three different media, including exposure to UV light to favor sporulation. Spore morphology was evaluated both macroscopically and microscopically, and chemical analysis was conducted using micro-Raman spectroscopy to assess spore composition. Significant differences were observed in colony morphology and spore characteristics among culture media. While typical spores predominated, atypical forms were also identified, which may represent a potential bias for identification. Comparative analysis with air samples by the Hirst method also revealed overall differences in spore morphology pattern. Standardizing culture conditions and accounting for variability in spore properties are essential for improving the reliability of bioaerosol monitoring systems. Further research is needed to refine detection methods for A. alternata and other airborne fungal spores.
{"title":"Variability in Alternaria alternata spore characteristics under different culture conditions: implications for automatic detection using air flow cytometry","authors":"Ioanna Pyrri, Nicolas Bruffaerts, Marko Radovic, Elizabet D’hooge, Ljiljana Janjusevic, Branko Sikoparija","doi":"10.1007/s10453-024-09831-z","DOIUrl":"10.1007/s10453-024-09831-z","url":null,"abstract":"<div><p>Airborne fungal spores of the genus <i>Alternaria</i> pose challenges for accurate airborne spore identification by automatic bioaerosol monitors, because of their significant implications for public health and agriculture due to their role as airborne allergen and plant pathogen. These systems require high-quality reference data for training algorithms by machine learning. <i>Alternaria alternata</i> was cultured on three different media, including exposure to UV light to favor sporulation. Spore morphology was evaluated both macroscopically and microscopically, and chemical analysis was conducted using micro-Raman spectroscopy to assess spore composition. Significant differences were observed in colony morphology and spore characteristics among culture media. While typical spores predominated, atypical forms were also identified, which may represent a potential bias for identification. Comparative analysis with air samples by the Hirst method also revealed overall differences in spore morphology pattern. Standardizing culture conditions and accounting for variability in spore properties are essential for improving the reliability of bioaerosol monitoring systems. Further research is needed to refine detection methods for <i>A. alternata</i> and other airborne fungal spores.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"437 - 446"},"PeriodicalIF":2.2,"publicationDate":"2024-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141576276","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-26DOI: 10.1007/s10453-024-09828-8
Chuan-Jie Zhang, Teng Liu, Jinxu Wang, Danlan Zhai, Min Chen, Yang Gao, Jialin Yu, Hui-Zhen Wu
Accurate identification and quantification of pollens (e.g., pollen of a flower, airborne pollens) is essential to understand plant pollination and reproductive biology, pollen aerobiology, and plant–insect interactions. Currently, a couple of methods are available for pollen counting, such as manual counting, flow cytometry-based and image software-based counting. However, due to inconsistent results and experimental repeatability, a more accurate, consistent, and high-throughput quantification approach is required. This study evaluated and compared the performance between a proposed Swin-transformer-YOLOv5 (S-T-YOLOv5) and common YOLO models in pollen detection and quantification. The present study demonstrated that the S-T-YOLOv5 outperformed other YOLO models, including YOLOv3, YOLOv4, YOLOR, and YOLOv5 for alfalfa (Medicago sativa L.) pollen detection and quantification, with excellent precision (99.6%), recall (99.4%), F1-score (0.995), mAP50 (99.4%), and mAP50-95 (76.2%) values. The mAP50-95 (mAP at an IoU of 0.5–0.95) of S-T-YOLOv5 was 9.9, 58.7, 25.3 and 8.2% higher than those of YOLOv3, YOLOv4, YOLOR, and YOLOv5, respectively. Additionally, the S-T-YOLOv5 showed a good transferability in quantifying pollen with varied sizes and shapes in different plant species, including annual fleabane, camelina, Canadian goldenrod, Indian lettuce, mustard, and oilseed rape. In summary, our results showed that the S-T-YOLOv5 is an accurate, robust, and widely adaptable pollen quantification approach, with minimizing errors and labor expense. We would like to highlight the potential application of S-T-YOLOv5 in quantifying samples of airborne pollens from a known pollen source or insect-dispersed pollens (e.g., alfalfa) in supporting the environmental risk assessment of genetically engineered (GE) plants.
{"title":"DeepPollenCount: a swin-transformer-YOLOv5-based deep learning method for pollen counting in various plant species","authors":"Chuan-Jie Zhang, Teng Liu, Jinxu Wang, Danlan Zhai, Min Chen, Yang Gao, Jialin Yu, Hui-Zhen Wu","doi":"10.1007/s10453-024-09828-8","DOIUrl":"10.1007/s10453-024-09828-8","url":null,"abstract":"<div><p>Accurate identification and quantification of pollens (e.g., pollen of a flower, airborne pollens) is essential to understand plant pollination and reproductive biology, pollen aerobiology, and plant–insect interactions. Currently, a couple of methods are available for pollen counting, such as manual counting, flow cytometry-based and image software-based counting. However, due to inconsistent results and experimental repeatability, a more accurate, consistent, and high-throughput quantification approach is required. This study evaluated and compared the performance between a proposed Swin-transformer-YOLOv5 (S-T-YOLOv5) and common YOLO models in pollen detection and quantification. The present study demonstrated that the S-T-YOLOv5 outperformed other YOLO models, including YOLOv3, YOLOv4, YOLOR, and YOLOv5 for alfalfa (<i>Medicago sativa</i> L.) pollen detection and quantification, with excellent precision (99.6%), recall (99.4%), F<sub>1</sub>-score (0.995), <i>mAP50</i> (99.4%), and <i>mAP50-95</i> (76.2%) values. The <i>mAP50-95</i> (<i>mAP</i> at an IoU of 0.5–0.95) of S-T-YOLOv5 was 9.9, 58.7, 25.3 and 8.2% higher than those of YOLOv3, YOLOv4, YOLOR, and YOLOv5, respectively. Additionally, the S-T-YOLOv5 showed a good transferability in quantifying pollen with varied sizes and shapes in different plant species, including annual fleabane, camelina, Canadian goldenrod, Indian lettuce, mustard, and oilseed rape. In summary, our results showed that the S-T-YOLOv5 is an accurate, robust, and widely adaptable pollen quantification approach, with minimizing errors and labor expense. We would like to highlight the potential application of S-T-YOLOv5 in quantifying samples of airborne pollens from a known pollen source or insect-dispersed pollens (e.g., alfalfa) in supporting the environmental risk assessment of genetically engineered (GE) plants.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"425 - 436"},"PeriodicalIF":2.2,"publicationDate":"2024-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141502242","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-04DOI: 10.1007/s10453-024-09816-y
Lilivet Díaz Vázquez, Michel Almaguer Chávez, María Fernández-González, Kenia C. Sánchez Espinosa
The airborne fungal spore content of the Havana city was studied from January to December 2017 by means a Hirst type volumetric methodology. Ten spore types were recorded for the first time in the atmosphere of the Cuba Island. A morphobiometrical description of the characteristics of each kind of spore was conducted. Four ascomycetes were identified (Amphisphaeria, Ascobolus, Cucurbidothis-type and Lewia) and six conidial genera were identified (Exosporium, Helicomina, Microsporum, Solheimia, and Trichocladium). Most of them are pantropical, saprophytes of different plants, and they could cause allergies or diseases in fruit crops of urban agriculture. This work increases the knowledge about the diversity of the airborne fungi in a neotropical region.
{"title":"New airborne fungal spores in the atmosphere of Havana, Cuba","authors":"Lilivet Díaz Vázquez, Michel Almaguer Chávez, María Fernández-González, Kenia C. Sánchez Espinosa","doi":"10.1007/s10453-024-09816-y","DOIUrl":"https://doi.org/10.1007/s10453-024-09816-y","url":null,"abstract":"<p>The airborne fungal spore content of the Havana city was studied from January to December 2017 by means a Hirst type volumetric methodology. Ten spore types were recorded for the first time in the atmosphere of the Cuba Island. A morphobiometrical description of the characteristics of each kind of spore was conducted. Four ascomycetes were identified (<i>Amphisphaeria, Ascobolus, Cucurbidothis</i>-type and <i>Lewia</i>) and six conidial genera were identified (<i>Exosporium</i>, <i>Helicomina, Microsporum, Solheimia,</i> and <i>Trichocladium</i>). Most of them are pantropical, saprophytes of different plants, and they could cause allergies or diseases in fruit crops of urban agriculture. This work increases the knowledge about the diversity of the airborne fungi in a neotropical region.</p>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"4 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141252138","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-22DOI: 10.1007/s10453-024-09826-w
Mary Hanson, Geoff Petch, Beverley Adams-Groom, Thor-Bjørn Ottosen, Carsten A. Skjøth
Bioaerosols are useful indicators of plant phenology and can demonstrate the impacts of climate change on both local and regional scales (e.g. pollen monitoring/flowering phenology). Analysing bioaerosols with eDNA approaches are becoming more popular to quantify the diversity of airborne plant environmental DNA (eDNA) and flowering season of plants and trees. Leaf abscission from broadleaved trees and other perennial species can also indicate the status of plant health in response to climate. This happens primarily during autumn in response to seasonal growth conditions and environmental factors, such as changing photoperiod and reduced temperatures. During this period biological material is released in larger quantities to the environment. Here, rural bioaerosol composition during late summer and autumn was captured by MiSEQ sequencing of the rRNA internal transcribed spacer 2 (ITS2) region, a common marker for taxonomic variation. Meteorological parameters were recorded from a proximal weather station. The composition of atmospheric taxa demonstrated that deciduous tree DNA forms part of the bioaerosol community during autumn and, for several common broadleaved tree species, atmospheric DNA abundance correlated to high wind events. This suggests that both flowering and autumn storms cause bioaerosols from deciduous trees that can be detected with eDNA approaches. This is an aspect that must be considered when eDNA methods are used to analyse either pollen or other fragments from trees.
生物气溶胶是植物物候学的有用指标,可以显示气候变化对当地和区域范围的影响(如花粉监测/开花物候学)。利用 eDNA 方法分析生物气溶胶越来越流行,可以量化空气传播的植物环境 DNA(eDNA)的多样性以及植物和树木的开花季节。阔叶树和其他多年生树种的叶片脱落也能表明植物健康状况对气候的反应。叶片脱落主要发生在秋季,是对季节性生长条件和环境因素(如光周期变化和温度降低)的反应。在此期间,生物物质会大量释放到环境中。在这里,通过对 rRNA 内部转录间隔区 2 (ITS2) 进行 MiSEQ 测序,捕捉了夏末和秋季农村生物气溶胶的组成。气象参数由附近的气象站记录。大气分类群的组成表明,落叶树 DNA 是秋季生物气溶胶群落的一部分,对于几种常见的阔叶树种来说,大气中的 DNA 丰度与大风事件相关。这表明,开花和秋季风暴都会造成落叶树的生物气溶胶,可以通过 eDNA 方法检测到。在使用 eDNA 方法分析来自树木的花粉或其他碎片时,必须考虑到这一点。
{"title":"Storms facilitate airborne DNA from leaf fragments outside the main tree pollen season","authors":"Mary Hanson, Geoff Petch, Beverley Adams-Groom, Thor-Bjørn Ottosen, Carsten A. Skjøth","doi":"10.1007/s10453-024-09826-w","DOIUrl":"10.1007/s10453-024-09826-w","url":null,"abstract":"<div><p>Bioaerosols are useful indicators of plant phenology and can demonstrate the impacts of climate change on both local and regional scales (e.g. pollen monitoring/flowering phenology). Analysing bioaerosols with eDNA approaches are becoming more popular to quantify the diversity of airborne plant environmental DNA (eDNA) and flowering season of plants and trees. Leaf abscission from broadleaved trees and other perennial species can also indicate the status of plant health in response to climate. This happens primarily during autumn in response to seasonal growth conditions and environmental factors, such as changing photoperiod and reduced temperatures. During this period biological material is released in larger quantities to the environment. Here, rural bioaerosol composition during late summer and autumn was captured by MiSEQ sequencing of the rRNA internal transcribed spacer 2 (ITS2) region, a common marker for taxonomic variation. Meteorological parameters were recorded from a proximal weather station. The composition of atmospheric taxa demonstrated that deciduous tree DNA forms part of the bioaerosol community during autumn and, for several common broadleaved tree species, atmospheric DNA abundance correlated to high wind events. This suggests that both flowering and autumn storms cause bioaerosols from deciduous trees that can be detected with eDNA approaches. This is an aspect that must be considered when eDNA methods are used to analyse either pollen or other fragments from trees.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"415 - 423"},"PeriodicalIF":2.2,"publicationDate":"2024-05-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-024-09826-w.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141108487","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-18DOI: 10.1007/s10453-024-09827-9
Eric Miranda-Valentin, Imar Mansilla-Rivera, Claudia P. Amaya-Ardila, Pablo A. Méndez-Lázaro, Loyda S. Torres-Berrios, Benjamín Bolaños-Rosero
Atopic dermatitis (AD) is a highly prevalent and multifactorial condition influenced by environmental factors such as the concentration of airborne allergens and meteorological variables. However, there is a lack of consensus on the role of these factors in triggering AD, particularly in tropical areas, where high values of these variables are common and studies are scarce. Therefore, this ecological study aimed to assess the association between concentrations of outdoor fungal spores and tree pollen, temperature, and water vapor pressure with AD-related medical services utilization in children 12 years or younger residing in a tropical urban area (San Juan, Puerto Rico), from 2017 to 2020. The study analyzed medical records of two dermatology clinics and local data on outdoor aeroallergens and meteorological variables to determine the number of AD-related medical claims during the study period, based on their medical diagnostic code. The multivariate regression analysis showed that high tree pollen concentrations (IRR = 1.2670, p = 0.032) and low average temperatures (IRR = 1.3114, p = 0.009) increased the probability of AD-related medical claims. In contrast, this probability was reduced with high average temperatures (IRR = 0.6782, p = 0.001) and low water vapor pressure values (IRR = 0.7802, p = 0.022). No associations were found with outdoor fungal spores. In conclusion, this study found that high tree pollen concentrations and low temperatures increased the utilization of AD-related medical services. Educating individuals about reducing exposure to unfavorable environmental conditions could be a useful intervention in preventing the exacerbation of AD.
{"title":"High tree pollen levels and low temperatures increased the utilization of atopic dermatitis-related medical services in children residing in a tropical urban area (San Juan, Puerto Rico)","authors":"Eric Miranda-Valentin, Imar Mansilla-Rivera, Claudia P. Amaya-Ardila, Pablo A. Méndez-Lázaro, Loyda S. Torres-Berrios, Benjamín Bolaños-Rosero","doi":"10.1007/s10453-024-09827-9","DOIUrl":"https://doi.org/10.1007/s10453-024-09827-9","url":null,"abstract":"<p>Atopic dermatitis (AD) is a highly prevalent and multifactorial condition influenced by environmental factors such as the concentration of airborne allergens and meteorological variables. However, there is a lack of consensus on the role of these factors in triggering AD, particularly in tropical areas, where high values of these variables are common and studies are scarce. Therefore, this ecological study aimed to assess the association between concentrations of outdoor fungal spores and tree pollen, temperature, and water vapor pressure with AD-related medical services utilization in children 12 years or younger residing in a tropical urban area (San Juan, Puerto Rico), from 2017 to 2020. The study analyzed medical records of two dermatology clinics and local data on outdoor aeroallergens and meteorological variables to determine the number of AD-related medical claims during the study period, based on their medical diagnostic code. The multivariate regression analysis showed that high tree pollen concentrations (IRR = 1.2670, <i>p</i> = 0.032) and low average temperatures (IRR = 1.3114, <i>p</i> = 0.009) increased the probability of AD-related medical claims. In contrast, this probability was reduced with high average temperatures (IRR = 0.6782, <i>p</i> = 0.001) and low water vapor pressure values (IRR = 0.7802, <i>p</i> = 0.022). No associations were found with outdoor fungal spores. In conclusion, this study found that high tree pollen concentrations and low temperatures increased the utilization of AD-related medical services. Educating individuals about reducing exposure to unfavorable environmental conditions could be a useful intervention in preventing the exacerbation of AD.</p>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"27 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-05-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141060101","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}