Bioaerosols can be spread through coughing, sneezing, respiratory droplets and aerosol particles, and public awareness of the health risks of bioaerosols has increased. Based on bioaerosol culturable microbe concentration data collected from March–December in 2015, 2018 and 2019, the health risks of bioaerosols were assessed by air quality level, month, population, and particle size using an average daily dose rate model. The concentration of culturable microorganisms is related to the air quality index (AQI). Under AQI values ranging from 51–100, the concentration of culturable microorganisms was the highest, while the concentration of culturable microorganisms was the lowest for AQI values ranging from 101–150. The health risk in June and July 2015 was the highest, the change trends in 2018 and 2019 were similar, the health risk was the highest in October, and the health risk of bioaerosols along the inhalation route was 103–104 times that along the exposure route. The health risk of bioaerosols was generally higher in summer and autumn than in spring and winter over the three-year period. The health risk for different categories of individuals indicated the same trend over the 3-year period, with the health risk for adults exceeding that for children and the health risk for men exceeding that for women. The health risk of bioaerosols was high under particle sizes ranging from 1.10–4.70 μm. The study results could provide data support for the analysis of bioaerosol-related health risks and offer a reference for the prevention and control of urban microbial diseases.
{"title":"Abundance and health risk of bioaerosols in the coastal areas of Qingdao, China","authors":"Lingchong Yan, Ting Zhang, Shaohua Sun, Yongzhong Song, Chen Han, Yao Wang, Jianhua Qi, Xianguo Li, Dahai Zhang","doi":"10.1007/s10453-024-09822-0","DOIUrl":"10.1007/s10453-024-09822-0","url":null,"abstract":"<div><p>Bioaerosols can be spread through coughing, sneezing, respiratory droplets and aerosol particles, and public awareness of the health risks of bioaerosols has increased. Based on bioaerosol culturable microbe concentration data collected from March–December in 2015, 2018 and 2019, the health risks of bioaerosols were assessed by air quality level, month, population, and particle size using an average daily dose rate model. The concentration of culturable microorganisms is related to the air quality index (AQI). Under AQI values ranging from 51–100, the concentration of culturable microorganisms was the highest, while the concentration of culturable microorganisms was the lowest for AQI values ranging from 101–150. The health risk in June and July 2015 was the highest, the change trends in 2018 and 2019 were similar, the health risk was the highest in October, and the health risk of bioaerosols along the inhalation route was 10<sup>3</sup>–10<sup>4</sup> times that along the exposure route. The health risk of bioaerosols was generally higher in summer and autumn than in spring and winter over the three-year period. The health risk for different categories of individuals indicated the same trend over the 3-year period, with the health risk for adults exceeding that for children and the health risk for men exceeding that for women. The health risk of bioaerosols was high under particle sizes ranging from 1.10–4.70 μm. The study results could provide data support for the analysis of bioaerosol-related health risks and offer a reference for the prevention and control of urban microbial diseases.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"391 - 401"},"PeriodicalIF":2.2,"publicationDate":"2024-05-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140975326","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-13DOI: 10.1007/s10453-024-09824-y
Xiaorui Feng, Peiya Hu, Tingyu Jin, Jiehong Fang, Fan Tang, Han Jiang, Chenze Lu
Airborne pathogens pose a great threat to public health, and their appearance in bioaerosol also increases the contiguousness due to the long survival time and transmitting range. Real-time monitoring and rapid detection methods provide more effective prevention and control of airborne pathogens. The whole procedure could be divided into bioaerosol collection and detection processes. This review presents the basic principles and recent advances in commonly used methods for each of these two steps. We categorized four different kinds of collection methods based on their principles and discussed possible enrichment methods against a small amount of targets. Four different detection methods were compared regarding their ability to perform rapid testing. In the final section, we analyzed the latest trend in combining all these steps to set up a single device or platform for rapid, automated, and continuous on-site bioaerosol monitoring to overcome time and space constraints and increase the speed of the entire monitoring process. We conclude that an integrated all-in-one system using a microfluidic platform is the most promising solution for real-time monitoring of airborne pathogens, since they are capable of simplifying operational steps, efficient collection, and high-throughput detection, demonstrating the strong potential of field-deployable platforms.
{"title":"On-site monitoring of airborne pathogens: recent advances in bioaerosol collection and rapid detection","authors":"Xiaorui Feng, Peiya Hu, Tingyu Jin, Jiehong Fang, Fan Tang, Han Jiang, Chenze Lu","doi":"10.1007/s10453-024-09824-y","DOIUrl":"10.1007/s10453-024-09824-y","url":null,"abstract":"<div><p>Airborne pathogens pose a great threat to public health, and their appearance in bioaerosol also increases the contiguousness due to the long survival time and transmitting range. Real-time monitoring and rapid detection methods provide more effective prevention and control of airborne pathogens. The whole procedure could be divided into bioaerosol collection and detection processes. This review presents the basic principles and recent advances in commonly used methods for each of these two steps. We categorized four different kinds of collection methods based on their principles and discussed possible enrichment methods against a small amount of targets. Four different detection methods were compared regarding their ability to perform rapid testing. In the final section, we analyzed the latest trend in combining all these steps to set up a single device or platform for rapid, automated, and continuous on-site bioaerosol monitoring to overcome time and space constraints and increase the speed of the entire monitoring process. We conclude that an integrated all-in-one system using a microfluidic platform is the most promising solution for real-time monitoring of airborne pathogens, since they are capable of simplifying operational steps, efficient collection, and high-throughput detection, demonstrating the strong potential of field-deployable platforms.</p><h3>Graphical abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"303 - 341"},"PeriodicalIF":2.2,"publicationDate":"2024-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140934027","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-12DOI: 10.1007/s10453-024-09823-z
Dulcilena de Matos Castro e Silva, Valter Batista Duo Filho, Rosa Maria Nascimento Marcusso, Maria Regina Alves Cardoso, Fábio Luiz Teixeira Gonçalves
Bioaerosols are particles of great importance for several fields of research, and spores produced by fungi can exist as bioaerosols when suspended in the air. Microbiological standards for environmental monitoring of outdoor air parameters can be achieved by analyzing the relationship between airborne microorganisms and the prevailing environmental conditions. The outdoor air of the Metropolitan Region of São Paulo and the rural area in a city of the state of São Paulo (Ibiúna/SP), both in Brazil, were evaluated for the presence of microorganisms using the MAS-100 ECO (Merck®, Fr.) and M Air T (Millipore®) air sample collectors. Dichloran Rose-Bengal Chloramphenicol and Tryptic Soy Agars were used for fungal and bacterial isolation, respectively. Bacterial colonies were counted, and the plates with fungal colonies were sent for phenotypic identification up to genus and species level, respectively. Data on pollutant concentrations were obtained from the Environmental Company of the State of São Paulo. The highest number of Colony-Forming Units/m3 (CFU/m3) of microorganisms was measured in the winter and summer seasons, respectively, but the greatest Spore-Forming Units (SFU) of fungi were found in the rural area, where pollutant concentrations were lower. Nitrogen dioxide (NO2) had a slightly positive influence on the concentration of SFU of fungi in both areas studied. Sulfur dioxide (SO2) pollutant concentrations had both positive and negative great relations showing influence on microbial counts in the air of the rural area. In the rural area, the low bacteria count was influenced negatively by the low concentration of carbon monoxide (CO). The microbial counts were related to each other, as well as to the concentrations of pollutants, shown by all the correlations seen, indicating microorganisms as biomarkers of pollution in outdoor areas. The influence of environmental factors on the population and outdoor air biome is also explicit.
生物气溶胶是对多个研究领域具有重要意义的微粒,真菌产生的孢子悬浮在空气中可以作为生物气溶胶存在。通过分析空气中的微生物与当时环境条件之间的关系,可以实现对室外空气参数进行环境监测的微生物标准。我们使用 MAS-100 ECO (Merck®, Fr.) 和 M Air T (Millipore®) 空气样本采集器对巴西圣保罗大都会区和圣保罗州某市(Ibiúna/SP)农村地区的室外空气进行了微生物含量评估。分别使用二氯玫瑰-孟加拉氯霉素琼脂和胰蛋白酶大豆琼脂进行真菌和细菌分离。对细菌菌落进行计数,有真菌菌落的平板则分别送去进行表型鉴定,以确定菌属和菌种。污染物浓度数据来自圣保罗州环境公司。分别在冬季和夏季测得的微生物菌落形成单位(CFU/m3)数最多,但在污染物浓度较低的农村地区测得的真菌孢子形成单位(SFU)数最多。在研究的两个地区,二氧化氮(NO2)对真菌的孢子形成单位浓度都有轻微的积极影响。二氧化硫(SO2)污染物浓度对农村地区空气中微生物数量的影响有正负两种关系。在农村地区,细菌数量少受到一氧化碳(CO)浓度低的负面影响。微生物数量之间以及微生物数量与污染物浓度之间都存在相关性,所有相关性都表明微生物是室外地区污染的生物标记。环境因素对人口和室外空气生物群落的影响也是显而易见的。
{"title":"Analyses of culturable microorganisms and chemical pollutants in the air of urban and rural areas in the region of São Paulo, Brazil","authors":"Dulcilena de Matos Castro e Silva, Valter Batista Duo Filho, Rosa Maria Nascimento Marcusso, Maria Regina Alves Cardoso, Fábio Luiz Teixeira Gonçalves","doi":"10.1007/s10453-024-09823-z","DOIUrl":"10.1007/s10453-024-09823-z","url":null,"abstract":"<div><p>Bioaerosols are particles of great importance for several fields of research, and spores produced by fungi can exist as bioaerosols when suspended in the air. Microbiological standards for environmental monitoring of outdoor air parameters can be achieved by analyzing the relationship between airborne microorganisms and the prevailing environmental conditions. The outdoor air of the Metropolitan Region of São Paulo and the rural area in a city of the state of São Paulo (Ibiúna/SP), both in Brazil, were evaluated for the presence of microorganisms using the MAS-100 ECO (Merck®, Fr.) and M Air T (Millipore®) air sample collectors. Dichloran Rose-Bengal Chloramphenicol and Tryptic Soy Agars were used for fungal and bacterial isolation, respectively. Bacterial colonies were counted, and the plates with fungal colonies were sent for phenotypic identification up to genus and species level, respectively. Data on pollutant concentrations were obtained from the Environmental Company of the State of São Paulo. The highest number of Colony-Forming Units/m<sup>3</sup> (CFU/m<sup>3</sup>) of microorganisms was measured in the winter and summer seasons, respectively, but the greatest Spore-Forming Units (SFU) of fungi were found in the rural area, where pollutant concentrations were lower. Nitrogen dioxide (NO<sub>2</sub>) had a slightly positive influence on the concentration of SFU of fungi in both areas studied. Sulfur dioxide (SO<sub>2</sub>) pollutant concentrations had both positive and negative great relations showing influence on microbial counts in the air of the rural area. In the rural area, the low bacteria count was influenced negatively by the low concentration of carbon monoxide (CO). The microbial counts were related to each other, as well as to the concentrations of pollutants, shown by all the correlations seen, indicating microorganisms as biomarkers of pollution in outdoor areas. The influence of environmental factors on the population and outdoor air biome is also explicit.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"403 - 414"},"PeriodicalIF":2.2,"publicationDate":"2024-05-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140934299","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-10DOI: 10.1007/s10453-024-09825-x
Ivan Cherrez-Ojeda, Karla Robles-Velasco, German D. Ramon, Laura Barrionuevo, Oscar Calderon Llosa, Denisse Cevallos-Levicek, Marco Faytong-Haro, Andrés Espinoza-Maticurena, Patricio Alvarez-Muñoz, Ivan Tinoco, László Makra, Áron József Deák
Pollen, particularly from the Ambrosia genus, plays a pivotal role in triggering allergic rhinoconjunctivitis symptoms. This review delves into the global background of Ambrosia, focusing on its origins, invasive potential, and spread to South America. The ecological niche for Ambrosia species is explored, emphasizing its stability globally but exhibiting unique and dynamic features in South America. Information on Ambrosia pollen concentration in South America is summarized, revealing varying levels across countries. The establishment of new aerobiology stations, as highlighted in the latest findings, contributes valuable data for understanding allergen risk management in the region. The health perspective addresses the rise in allergic diseases due to climate change, emphasizing the need for continuous monitoring, especially in South America. Agricultural damage inflicted by Ambrosia is discussed, emphasizing its invasive potential, high seed production, and negative impact on crops, forage quality, and livestock. The review also positions Ambrosia as a marker of climate change, discussing the effects of global warming on pollen seasons, concentrations, and allergenic characteristics. The importance of expanding aerobiology stations in South America is underscored, requiring collaborative efforts from government, scientific societies, and academic institutions. The review concludes by advocating for increased monitoring to address potential challenges posed by Ambrosia, offering a basis for tailored interventions and future research in South American regions.
{"title":"Ragweed in South America: the relevance of aerobiology stations in Latin America","authors":"Ivan Cherrez-Ojeda, Karla Robles-Velasco, German D. Ramon, Laura Barrionuevo, Oscar Calderon Llosa, Denisse Cevallos-Levicek, Marco Faytong-Haro, Andrés Espinoza-Maticurena, Patricio Alvarez-Muñoz, Ivan Tinoco, László Makra, Áron József Deák","doi":"10.1007/s10453-024-09825-x","DOIUrl":"10.1007/s10453-024-09825-x","url":null,"abstract":"<div><p>Pollen, particularly from the <i>Ambrosia</i> genus, plays a pivotal role in triggering allergic rhinoconjunctivitis symptoms. This review delves into the global background of <i>Ambrosia</i>, focusing on its origins, invasive potential, and spread to South America. The ecological niche for <i>Ambrosia</i> species is explored, emphasizing its stability globally but exhibiting unique and dynamic features in South America. Information on <i>Ambrosia</i> pollen concentration in South America is summarized, revealing varying levels across countries. The establishment of new aerobiology stations, as highlighted in the latest findings, contributes valuable data for understanding allergen risk management in the region. The health perspective addresses the rise in allergic diseases due to climate change, emphasizing the need for continuous monitoring, especially in South America. Agricultural damage inflicted by <i>Ambrosia</i> is discussed, emphasizing its invasive potential, high seed production, and negative impact on crops, forage quality, and livestock. The review also positions <i>Ambrosia</i> as a marker of climate change, discussing the effects of global warming on pollen seasons, concentrations, and allergenic characteristics. The importance of expanding aerobiology stations in South America is underscored, requiring collaborative efforts from government, scientific societies, and academic institutions. The review concludes by advocating for increased monitoring to address potential challenges posed by <i>Ambrosia</i>, offering a basis for tailored interventions and future research in South American regions.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 3","pages":"343 - 351"},"PeriodicalIF":2.2,"publicationDate":"2024-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-024-09825-x.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140934414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-16DOI: 10.1007/s10453-024-09818-w
Willem W. Verstraeten, Rostislav Kouznetsov, Nicolas Bruffaerts, Mikhail Sofiev, Andy W. Delcloo
In Europe, more than one quarter of the adult population and one third of the children suffer from pollinosis, but the geographical variability is large. In Belgium, at least ~ 10% of the people develop allergies due to birch pollen. These patients may benefit from a forecasting system that raises alerts when episodes with huge amount of airborne birch pollen grains are expected. Such a forecast system for birch pollen was established for the Belgian territory in 2023 based on the pollen emission and transport model System for Integrated modeLling of Atmospheric coMposition (SILAM). The question, however, is which uncertainty in modelling and forecasting airborne pollen levels can be expected? Here, we assess the uncertainty in modelling airborne birch pollen levels near the surface using SILAM in a Monte Carlo error approach summarized by the relative Coefficient of Variation (CV%) as descriptive statistic for the season of 2018 in Belgium. For the major inputs that drive the birch pollen model—the amount and location of birch trees (0.1° × 0.1° map), the start and end of the birch pollen season (1° × 1° map), and the ripening temperature of birch catkins—sets of 100 randomly sampled data layers were prepared for running SILAM 100 times. For each set of model input, 100 spatio-temporal maps of airborne birch pollen levels were produced and its spread was quantified by the CV%. We show that the spatial uncertainty of pollen emissions sources in SILAM is substantially high, but that the uncertainties of the parameters determining the start and end of the season are at least equally important. By accumulating the effects of all investigated model input uncertainties including the impact of the catkins-ripening temperature, CV% values of 50% and more are obtained when quantifying the variation of the modelled airborne birch pollen levels. These errors are in line with reported values from the current reference method for monitoring airborne birch pollen grains near the surface.
{"title":"Assessing uncertainty in airborne birch pollen modelling","authors":"Willem W. Verstraeten, Rostislav Kouznetsov, Nicolas Bruffaerts, Mikhail Sofiev, Andy W. Delcloo","doi":"10.1007/s10453-024-09818-w","DOIUrl":"10.1007/s10453-024-09818-w","url":null,"abstract":"<div><p>In Europe, more than one quarter of the adult population and one third of the children suffer from pollinosis, but the geographical variability is large. In Belgium, at least ~ 10% of the people develop allergies due to birch pollen. These patients may benefit from a forecasting system that raises alerts when episodes with huge amount of airborne birch pollen grains are expected. Such a forecast system for birch pollen was established for the Belgian territory in 2023 based on the pollen emission and transport model System for Integrated modeLling of Atmospheric coMposition (SILAM). The question, however, is which uncertainty in modelling and forecasting airborne pollen levels can be expected? Here, we assess the uncertainty in modelling airborne birch pollen levels near the surface using SILAM in a Monte Carlo error approach summarized by the relative Coefficient of Variation (CV%) as descriptive statistic for the season of 2018 in Belgium. For the major inputs that drive the birch pollen model—the amount and location of birch trees (0.1° × 0.1° map), the start and end of the birch pollen season (1° × 1° map), and the ripening temperature of birch catkins—sets of 100 randomly sampled data layers were prepared for running SILAM 100 times. For each set of model input, 100 spatio-temporal maps of airborne birch pollen levels were produced and its spread was quantified by the CV%. We show that the spatial uncertainty of pollen emissions sources in SILAM is substantially high, but that the uncertainties of the parameters determining the start and end of the season are at least equally important. By accumulating the effects of all investigated model input uncertainties including the impact of the catkins-ripening temperature, CV% values of 50% and more are obtained when quantifying the variation of the modelled airborne birch pollen levels. These errors are in line with reported values from the current reference method for monitoring airborne birch pollen grains near the surface.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 2","pages":"271 - 286"},"PeriodicalIF":2.2,"publicationDate":"2024-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140617608","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Biological particles known as bioaerosols are present in the atmosphere and have recently been implicated as influencing agriculture, cloud development, biogeography, and human health. The present study was conducted to characterize airborne bacterial heterogeneity at Jeju Island in Korea and at Saitama and Toyama in Japan, focusing on potential human pathogens. Air samples were collected during the winter, when the monsoon blows from the northwest. Samples were analyzed by high-throughput sequencing and denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA genes to detect spatial differences in airborne bacteria and the possible spread of bacteria by transboundary transport. Compositions of the bacterial in samples collected on the same dates from the different sites were similar. Notably, bacteria from two genera that are potentially pathogenic for humans—Acinetobacter and Clostridium—were detected on the same day in both Korea and Japan. These results indicate the possibility of long-range transport of airborne bacteria and its potential impact on human health.
{"title":"Spatial variation of airborne bacterial heterogeneity and potential opportunistic human pathogens: a comparative study of sites in Korea and Japan","authors":"Makoto Seki, Hitoshi Tanaka, Shinichi Yonemochi, Ki-Ho Lee, Young-Ju Kim, Reika Iwamoto, Kei Sato, Daisuke Tanaka","doi":"10.1007/s10453-024-09817-x","DOIUrl":"10.1007/s10453-024-09817-x","url":null,"abstract":"<div><p>Biological particles known as bioaerosols are present in the atmosphere and have recently been implicated as influencing agriculture, cloud development, biogeography, and human health. The present study was conducted to characterize airborne bacterial heterogeneity at Jeju Island in Korea and at Saitama and Toyama in Japan, focusing on potential human pathogens. Air samples were collected during the winter, when the monsoon blows from the northwest. Samples were analyzed by high-throughput sequencing and denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA genes to detect spatial differences in airborne bacteria and the possible spread of bacteria by transboundary transport. Compositions of the bacterial in samples collected on the same dates from the different sites were similar. Notably, bacteria from two genera that are potentially pathogenic for humans—<i>Acinetobacter</i> and <i>Clostridium</i>—were detected on the same day in both Korea and Japan. These results indicate the possibility of long-range transport of airborne bacteria and its potential impact on human health.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 2","pages":"287 - 295"},"PeriodicalIF":2.2,"publicationDate":"2024-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140582498","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The viable bacterial assemblages in clouds at Réunion Island (Indian Ocean) were examined through culture-based approach. A total of 176 isolates were recovered from 15 independent cloud events collected during 3 field campaigns, and identified to the species level through full length 16S rRNA gene sequencing. As often in atmospheric samples, Alpha-, Beta- and Gamma-proteobacteria dominated, along with Actinobacteria, Firmicutes, and Bacteroidetes, depicting these as the backbone of the global aeromicrobiome. A comparative analysis with similar work from a cloud sampling site in Central France revealed site-specificities, and numerous common species. These latter included members of Pseudomonas, Sphingomonas, Bacillus, Staphylococcus, Rhodococcus and others, whose such widespread presence in clouds supports the existence of a pan-atmospheric microbiome. This also confirms that cultures remain powerful methods in the description of the viable microbial diversity by allowing deep taxonomic affiliation.
{"title":"Culturable bacteria in clouds at Réunion, tropical island","authors":"Thomas Charpentier, Muriel Joly, Céline Judon, Martine Sancelme, Magali Abrantes, Mickaël Vaïtilingom, Christelle Ghaffar, Maxence Brissy, Maud Leriche, Anne-Marie Delort, Laurent Deguillaume, Pierre Amato","doi":"10.1007/s10453-024-09819-9","DOIUrl":"10.1007/s10453-024-09819-9","url":null,"abstract":"<div><p>The viable bacterial assemblages in clouds at Réunion Island (Indian Ocean) were examined through culture-based approach. A total of 176 isolates were recovered from 15 independent cloud events collected during 3 field campaigns, and identified to the species level through full length 16S rRNA gene sequencing. As often in atmospheric samples, Alpha-, Beta- and Gamma-proteobacteria dominated, along with Actinobacteria, Firmicutes, and Bacteroidetes, depicting these as the backbone of the global aeromicrobiome. A comparative analysis with similar work from a cloud sampling site in Central France revealed site-specificities, and numerous common species. These latter included members of <i>Pseudomonas</i>, <i>Sphingomonas</i>, <i>Bacillus</i>, <i>Staphylococcus</i>, <i>Rhodococcus</i> and others, whose such widespread presence in clouds supports the existence of a pan-atmospheric microbiome. This also confirms that cultures remain powerful methods in the description of the viable microbial diversity by allowing deep taxonomic affiliation.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 2","pages":"297 - 302"},"PeriodicalIF":2.2,"publicationDate":"2024-04-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140582378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-03DOI: 10.1007/s10453-024-09820-2
Fiona Tummon, Beverley Adams-Groom, Célia M. Antunes, Nicolas Bruffaerts, Jeroen Buters, Paloma Cariñanos, Sevcan Celenk, Marie Choël, Bernard Clot, Antonella Cristofori, Benoît Crouzy, Athanasios Damialis, Alberto Rodríguez Fernández, Délia Fernández González, Carmen Galán, Björn Gedda, Regula Gehrig, Monica Gonzalez-Alonso, Elena Gottardini, Jules Gros-Daillon, Lenka Hajkova, David O’Connor, Pia Östensson, Jose Oteros, Andreas Pauling, Rosa Pérez-Badia, Victoria Rodinkova, F. Javier Rodríguez-Rajo, Helena Ribeiro, Ingrida Sauliene, Branko Sikoparija, Carsten Ambelas Skjøth, Antonio Spanu, Mikhail Sofiev, Olga Sozinova, Lidija Srnec, Nicolas Visez, Letty A. de Weger
The advent of automatic pollen and fungal spore monitoring over the past few years has brought about a paradigm change. The provision of real-time information at high temporal resolution opens the door to a wide range of improvements in terms of the products and services made available to a widening range of end-users and stakeholders. As technology and methods mature, it is essential to properly quantify the impact automatic monitoring has on the different end-user domains to better understand the real long-term benefits to society. In this paper, we focus the main domains where such impacts are expected, using Europe as a basis to provide qualitative estimates and to describe research needs to better quantify impacts in future. This will, in part, also serve to justify further investment and help to expand monitoring networks.
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Pub Date : 2024-03-27DOI: 10.1007/s10453-024-09815-z
Sefat-E- Barket, Md. Rezaul Karim
In 2019, the world grappled with an unexpected and severe global health crisis—the Coronavirus disease (COVID-19) outbreak, which significantly impacted various aspects of human life. This case study, focusing on Bangladesh, aimed to uncover the complex spatial patterns and potential risk factors influencing the virus’s uneven spread across 64 districts. To analyze spatial patterns, two techniques, namely Moran I and Geary C, were employed to study spatial autocorrelation. Hotspots and coldspots were identified using local Moran I, while spatial hotspots were pinpointed using local Getis Ord G. Exploring spatial heterogeneity involved implementing two non-spatial models (Poisson–Gamma and Poisson-Lognormal) and three spatial models (Conditional Autoregressive model, Convolution model, and Leroux model) through Gibbs sampling. The Leroux model emerged as the optimal choice, meeting criteria based on the lowest values of deviance information criterion and Watanabe–Akaike information criterion. Regression analysis revealed that factors such as humidity, population density, and urbanization were associated with an increase in COVID-19 cases, while the aging index appeared to hinder the virus’s spread. The research outcomes provide a comprehensive framework adaptable to the evolving nature of COVID-19 in Bangladesh. It categorizes influential factors into distinct clusters, enabling government agencies, policymakers, and healthcare professionals to make informed decisions for controlling the pandemic and addressing future infectious diseases.
摘要 2019 年,世界面临着一场意想不到的严重全球健康危机--冠状病毒病(COVID-19)的爆发,对人类生活的各个方面产生了重大影响。本案例研究以孟加拉国为重点,旨在揭示影响病毒在 64 个地区不均衡传播的复杂空间模式和潜在风险因素。为了分析空间模式,我们采用了 Moran I 和 Geary C 两种技术来研究空间自相关性。在探索空间异质性时,通过吉布斯抽样,采用了两个非空间模型(泊松-伽马模型和泊松-对数正态模型)和三个空间模型(条件自回归模型、卷积模型和勒鲁模型)。Leroux 模型符合偏差信息准则和 Watanabe-Akaike 信息准则的最低值标准,成为最佳选择。回归分析表明,湿度、人口密度和城市化等因素与 COVID-19 病例的增加有关,而老龄化指数似乎阻碍了病毒的传播。研究成果提供了一个综合框架,可适应 COVID-19 在孟加拉国不断演变的性质。它将有影响的因素分为不同的群组,使政府机构、政策制定者和医疗保健专业人员能够做出明智的决策,以控制流行病和应对未来的传染病。
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