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Composition and spatiotemporal variations in the indoor airborne bacterial communities in two Chilean medical centers 智利两个医疗中心室内空气细菌群落的组成和时空变化
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-10-09 DOI: 10.1007/s10453-025-09887-5
Elizabeth Carrazana, Tay Ruiz, Marco A. Campos, Joaquín I. Rilling, So Fujiyoshi, Fumito Maruyama, Milko A. Jorquera

Bioaerosols are highly relevant in medical centers (MCs), where factors such as seasonality, human occupancy (HO), and ventilation systems (VS) are proposed to influence the airborne bacterial communities and potential airborne human pathogenic bacteria (PAHPB). We investigated the compositions and spatiotemporal variations in the airborne bacterial communities, including those of PAHPB and antibiotic resistance genes (ARG), in two MCs in Chile during 2021 and 2022. 16S rRNA gene amplicon sequencing and qPCR revealed significant (p < 0.05) variations in diversity, composition, and gene abundance across the studied years. Proteobacteria, Actinobacteria, and Firmicutes were dominant in bioaerosols, with gene abundances ranging from 103 to 107 copies m3 and were negatively correlated with diversity. The PAHPB and ARG genes were variable, with Kleb2 (Klebsiella pneumoniae) and blaTEM (β-lactam) being the most prevalent. Although HO and VS influenced the bacterial communities, no significant correlations (p < 0.05) with bacterial diversity were found. Interestingly, 6 genera in the core microbiome were associated with humans, whereas 19 genera were associated with the environment, suggesting that outdoor air is a relevant factor influencing bacterial communities in MCs. We provide baseline data for research on bioaerosols in MCs, highlighting the complexity of airborne bacterial communities and suggesting some factors influencing their spatiotemporal variations.

生物气溶胶与医疗中心(MCs)高度相关,其中季节性,人类占用(HO)和通风系统(VS)等因素被认为会影响空气中的细菌群落和潜在的空气中人类致病菌(PAHPB)。研究了2021年和2022年智利两个MCs空气细菌群落的组成和时空变化,包括PAHPB和抗生素耐药基因(ARG)。16S rRNA基因扩增子测序和qPCR显示,在研究年份中,基因多样性、组成和丰度存在显著差异(p < 0.05)。变形菌门、放线菌门和厚壁菌门在生物气溶胶中占主导地位,基因丰度在103 ~ 107拷贝m3之间,与多样性呈负相关。PAHPB和ARG基因是可变的,以Kleb2(肺炎克雷伯菌)和blaTEM (β-内酰胺)最为普遍。虽然HO和VS对细菌群落有影响,但与细菌多样性无显著相关性(p < 0.05)。有趣的是,核心微生物组中有6个属与人类有关,而19个属与环境有关,这表明室外空气是影响MCs细菌群落的相关因素。我们为MCs中生物气溶胶的研究提供了基线数据,突出了空气中细菌群落的复杂性,并提出了影响其时空变化的一些因素。
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引用次数: 0
Topical collection: aerobiology and planetary health 专题收集:空气生物学和地球健康
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-10-08 DOI: 10.1007/s10453-025-09885-7
Athanasios Damialis, Łukasz Grewling, Matt Smith
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引用次数: 0
Comparison of the spectrum and quantity of airborne bioparticles above morphologically typical populations of Ambrosia artemisiifolia and those with reduced male flower production 形态典型群体与雄花产量减少群体空气中生物微粒的光谱和数量比较
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-10-06 DOI: 10.1007/s10453-025-09886-6
Jana Ščevková, Matúš Žilka, Peter Tóth, Eva Zahradníková, Michal Hrabovský

Ambrosia artemisiifolia L. (common ragweed) is an invasive species in Europe that produces highly allergenic pollen with substantial health impacts. Recently, populations showing aberrant floral morphotypes, characterised by bracteate racemes and strongly reduced or absent staminate heads, have been observed, particularly at field margins. The causes of these abnormalities remain unclear, although the involvement of pathogens has been suggested. We hypothesised that aberrant populations differ from typical ones in both the amount of airborne pollen released and the spectrum of other bioparticles, including potential phytopathogens. To test this, spore traps were installed at three heights (0, 50, and 150 cm) above both typical and aberrant populations, and the captured airborne bioparticles were analysed. Pollen concentrations were markedly reduced above aberrant populations, consistent with their feminised floral structures. Differences were also observed in the composition and abundance of airborne fungal spores, with several phytopathogenic taxa, such as Cryptophyllachora, Albugo, and Puccinia, occurring more frequently above aberrant stands. These findings provide the first aerobiological evidence of distinct airborne particle profiles associated with the aberrant morphotype, highlighting possible links with phytopathogens. Further work, including tissue-level pathogen detection, will be required to confirm causal relationships.

豚草(Ambrosia artemisiifolia L.)是欧洲的一种入侵物种,产生高度过敏性的花粉,对健康产生重大影响。最近,已经观察到的群体表现出异常的花形态,其特征是苞片总状花序和雄蕊头状花序强烈减少或缺失,特别是在田地边缘。这些异常的原因尚不清楚,尽管有人认为与病原体有关。我们假设,在空气中释放的花粉数量和其他生物颗粒(包括潜在的植物病原体)的光谱上,异常种群与典型种群不同。为了验证这一点,在典型种群和异常种群上方的三个高度(0,50和150厘米)安装了孢子陷阱,并对捕获的空气中的生物颗粒进行了分析。花粉浓度明显降低,与雌性化花结构一致。空气中真菌孢子的组成和丰度也存在差异,在异常林分上,一些植物病原分类群,如隐枝菌属、白枝菌属和普契尼菌属更频繁地出现。这些发现提供了与异常形态相关的不同空气传播颗粒谱的第一个有氧生物学证据,突出了与植物病原体的可能联系。进一步的工作,包括组织水平的病原体检测,将需要确认因果关系。
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引用次数: 0
Correction: Development and verification of a taxa‑specific gridded pollen modelling system for the UK 更正:英国特定分类群网格花粉建模系统的开发和验证
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-10-04 DOI: 10.1007/s10453-025-09884-8
Lucy Sarah Neal, Katherine Brown, Paul Agnew, Jonathan Bennie, Yolanda Clewlow, Regan Early, Deborah Hemming
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引用次数: 0
40 years of Aerobiologia, the international journal of aerobiology 国际航空生物学杂志《有氧生物学》的40年历史
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-09-30 DOI: 10.1007/s10453-025-09883-9
Carmen Galán, Paolo Mandrioli, Matt Smith
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引用次数: 0
Toward comprehensive airborne pathogen control in Indonesia’s tropical setting 在印度尼西亚热带环境中全面控制空气传播病原体
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-09-22 DOI: 10.1007/s10453-025-09881-x
Feri Eko Hermanto, Andhika Prima Prasetyo, Ratna Dwi Puji Astuti, Eka Gunarti Ningsih, Anissa Nofita Sari, Indira Prakoso

Airborne pathogens pose significant public health risks, especially in tropical countries like Indonesia, where year-round warmth and high humidity facilitate microbial survival. Dense urban settings, limited healthcare infrastructure, and frequent interactions between human and animal populations exacerbate the spread of bacteria, viruses, and fungi through both indoor and outdoor air. Traditional sampling methods, including settle plates and impaction samplers, have offered foundational insights into microbial loads but often fail to detect the full range of microorganisms. Recent advances in molecular diagnostics, such as polymerase chain reaction and metagenomics, now enable detailed analyses of airborne pathogens, uncovering critical information about species diversity and potential antibiotic resistance. Recognizing the complexity of disease transmission, this manuscript embraces a One Health perspective, advocating for collaboration across human, veterinary, and environmental sectors. Policy integration is equally vital: While Indonesia enforces regulations on chemical pollutants, microbial air quality remains largely overlooked. Strengthening detection strategies, updating public health policies, and raising community awareness can collectively shift national efforts from reactive containment to proactive surveillance. Recommendations include establishing multi-tiered monitoring networks that gather baseline data while rapidly investigating hotspots, augmenting laboratory capacity for advanced diagnostic methods, and implementing regulatory frameworks that address airborne pathogen thresholds in high-occupancy facilities. Through these strategies, Indonesia can bolster its resilience against airborne diseases, safeguarding public health amid rapid demographic and environmental changes.

空气传播的病原体构成重大的公共卫生风险,特别是在印度尼西亚等热带国家,那里全年温暖和高湿度有利于微生物的生存。密集的城市环境、有限的医疗基础设施以及人与动物种群之间频繁的相互作用加剧了细菌、病毒和真菌通过室内和室外空气的传播。传统的取样方法,包括沉淀板和撞击取样器,提供了对微生物负荷的基本见解,但往往不能检测到全部微生物。分子诊断的最新进展,如聚合酶链反应和宏基因组学,现在能够对空气传播的病原体进行详细分析,揭示有关物种多样性和潜在抗生素耐药性的关键信息。认识到疾病传播的复杂性,本文采用“同一个健康”的观点,倡导人类、兽医和环境部门之间的合作。政策整合同样至关重要:虽然印尼对化学污染物实施了监管,但微生物空气质量在很大程度上仍被忽视。加强检测战略、更新公共卫生政策和提高社区意识,可以共同将国家努力从被动遏制转变为主动监测。建议包括建立多层监测网络,在快速调查热点的同时收集基线数据,增强先进诊断方法的实验室能力,以及实施管理框架,解决高占用设施中空气传播的病原体阈值问题。通过这些战略,印度尼西亚可以加强对空气传播疾病的抵御能力,在人口和环境迅速变化的情况下保障公众健康。
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引用次数: 0
Operational pollen classification using digital holography and fluorescence 应用数字全息和荧光技术进行花粉分类
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-09-20 DOI: 10.1007/s10453-025-09882-w
Benoît Crouzy, Marie-Pierre Meurville, Bernard Clot, Sophie Erb, Maria Lbadaoui-Darvas, Fiona Tummon, Gian Lieberherr

This note introduces the newly developed MeteoSwiss operational pollen classification model based on digital holography and induced fluorescence measurements. A targeted selection of curated training datasets together with a revised model architecture result in considerable improvements compared to previous operational model. The new classification model, which has been trained specifically for Switzerland, is provided openly for use in a standard format for machine learning interoperability. In addition to the description of the new classification model, we motivate the need for this development by presenting the most significant issue met during the first 5 years of operation of the Swiss automatic pollen monitoring network.

本文介绍了最新开发的基于数字全息和诱导荧光测量的MeteoSwiss操作花粉分类模型。与以前的操作模型相比,有针对性地选择精心策划的训练数据集以及修订的模型架构可以带来相当大的改进。新的分类模型是专门为瑞士训练的,以机器学习互操作性的标准格式公开提供使用。除了描述新的分类模型外,我们还通过介绍瑞士自动花粉监测网络运行前5年遇到的最重要问题来激发这一发展的需求。
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引用次数: 0
Aeroallergen sensitization patterns among allergic respiratory diseases patients living in Sana’a City, Yemen 居住在也门萨那市的过敏性呼吸道疾病患者的空气过敏原致敏模式
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-09-04 DOI: 10.1007/s10453-025-09878-6
Ali Abdullah Al-Mehdar, Mohammed A. W. Almorish, Muath Aldomini, Sultan Abdulwadoud Alshoabi, Ahmed M. E. Elkhalifa, Fatima ELshikh Mohammed Elhadi, Elsharif A. Bazie, Moataz Mohamed Alhasan, Khaled Mohammed Al-Sayaghi, Muayad Saud Albadrani

The sensitization to prevalent environmental aeroallergens is pivotal in the etiology and intensity of respiratory allergic diseases, particularly bronchial asthma (BA) and allergic rhinitis (AR). The assessment of aeroallergen sensitization is essential for clinicians to refine therapeutic approaches. Skin prick testing (SPT) is recognized as a reliable diagnostic tool for immunoglobulin E (IgE)-mediated allergic disorders, yet; however, the allergen sensitivity profile in Yemen remains largely unexplored. This study aimed to assess the sensitization profiles to aeroallergens in patients with respiratory allergic diseases in Sana'a City, Yemen. This cross-sectional study, involving 315 patients with respiratory allergic diseases, was conducted between February and May 2020 in Sana’a City, Yemen. The patients were classified based on demographic and clinical diagnosis. The study excluded individuals with a history of drug use, including antihistamines, corticosteroids, anti-inflammatory agents, and immunosuppressants, which could interfere with active infections, allergic skin conditions, pregnancy, or skin tests. The SPT was conducted using 20 different types of environmental aeroallergen extracts. Data were examined with SPSS version 23.0, where descriptive statistics for study variables were computed and relevant significance tests were executed to ascertain statistical relevance. The study of 315 patients included 222 (70.5%) males and 93 (29.5%) females, with a median age of 41 years. The prevalence of allergic respiratory diseases was 55.9% for AR and 44.1% for BA. The overall prevalence of sensitization to aeroallergens was 63.5%. Among the cohort, 33.7% exhibited monosensitization to a single aeroallergen, whereas 29.8% demonstrated sensitization to multiple aeroallergens. The predominant aeroallergens sensitization included weeds (41.1%), house dust mites (HDM) (23.8%), and animal dander (17.5%). The most common aeroallergens were Salsola kali at 10.5%, Dermatophagoides pteronyssinus (D. pteronyssinus) at 10.2%, and Dermatophagoides farinae (D. farinae) at 9.8. Aeroallergen sensitization was significantly more prevalent in patients with AR than in those with BA, with notable increases in sensitization rates for weeds and HDM aeroallergens (p˃ 0.05), and a significant rise in sensitization to date palm allergen (Phoenix dactylifera) in AR compared to BA (p = 0.017). The study findings indicate a significant prevalence of sensitization to various aeroallergens in individuals with AR and BA. Salsola kali, D. pteronyssinus, and D. farinae were identified as the most common aeroallergens in study patients.

对环境中普遍存在的空气过敏原的致敏在呼吸道变应性疾病,特别是支气管哮喘(BA)和变应性鼻炎(AR)的病因和强度中起关键作用。空气过敏原致敏性的评估对临床医生完善治疗方法至关重要。皮肤点刺试验(SPT)被认为是免疫球蛋白E (IgE)介导的过敏性疾病的可靠诊断工具,然而;然而,也门的过敏原敏感性概况在很大程度上仍未被探索。本研究旨在评估也门萨那市呼吸道变态反应性疾病患者对空气过敏原的致敏情况。这项横断面研究于2020年2月至5月在也门萨那市进行,涉及315名呼吸道过敏性疾病患者。根据人口学和临床诊断对患者进行分类。该研究排除了有药物使用史的个体,包括抗组胺药、皮质类固醇、抗炎药和免疫抑制剂,这些药物可能会干扰活动性感染、过敏性皮肤状况、怀孕或皮肤试验。使用20种不同类型的环境气致过敏原提取物进行SPT。使用SPSS 23.0版本对数据进行检验,其中对研究变量进行描述性统计计算,并执行相关显著性检验以确定统计相关性。315例患者中,男性222例(70.5%),女性93例(29.5%),中位年龄41岁。变应性呼吸道疾病在AR和BA中的患病率分别为55.9%和44.1%。空气过敏原致敏率为63.5%。在队列中,33.7%表现出对单一空气过敏原的单致敏,而29.8%表现出对多种空气过敏原的致敏。主要致敏气体过敏原包括杂草(41.1%)、室内尘螨(23.8%)和动物皮屑(17.5%)。最常见的空气过敏原依次为:Salsola kali(10.5%)、dermatophahaides pteronyssinus (d.p teronyssinus)(10.2%)和dermatophahaides farinae (d.p arinae)(9.8)。AR患者对空气过敏原的致敏率明显高于BA患者,对杂草和HDM空气过敏原的致敏率显著升高(p > 0.05),对枣棕榈过敏原(凤凰dactylifera)的致敏率显著升高(p = 0.017)。研究结果表明,AR和BA患者对各种空气过敏原的致敏率显著升高。Salsola kali, D. teronyssinus和D. farinae被确定为研究患者中最常见的空气过敏原。
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引用次数: 0
Transmission of influenza is driven by weather conditions in Germany 流感的传播受德国天气状况的影响
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-09-01 DOI: 10.1007/s10453-025-09875-9
Elisabeth Pfrommer, Gülsah Gabriel, Ulrich E. Schaible, Thomas Gutsmann, Kerstin Schepanski

Influenza seasonality is influenced by environmental and ecological conditions as well as evolutionary processes shaping the transmission potential of airborne Influenza A virus (IAV) particles and subsequent infectious disease. Considering fluctuating environmental conditions with absolute humidity as a key driver, we analyzed environmental effects on the infection dynamic in Germany during the influenza seasons between 2010 and 2018. Despite the fact that Germany is a comparably homogenous country with regard to socio-economical, and environmental properties, influenza seasons differed significantly between individual German counties and cities, with a clear gradient in incidence and intensity between the Southeast and Northwest. Thus, the transmission of IAV influenced by slight differences in the predominant weather conditions throughout Germany, emphasizing the importance of air temperature and absolute humidity for airborne flu virus transmission.

流感季节性受环境和生态条件以及影响空气传播甲型流感病毒(IAV)颗粒和随后的传染病的进化过程的影响。考虑到以绝对湿度为关键驱动因素的波动环境条件,我们分析了2010年至2018年流感季节期间环境对德国感染动态的影响。尽管德国在社会经济和环境属性方面是一个相对同质的国家,但流感季节在德国各个县和城市之间存在显著差异,东南和西北之间的发病率和强度有明显的梯度。因此,整个德国主要天气条件的细微差异影响了IAV的传播,强调了空气温度和绝对湿度对空气传播流感病毒的重要性。
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引用次数: 0
Report on rice diseases in Brunei Darussalam and their association with airborne fungal spores 文莱达鲁萨兰国水稻病害及其与空气传播真菌孢子的关系报告
IF 2.1 3区 环境科学与生态学 Q2 BIOLOGY Pub Date : 2025-08-28 DOI: 10.1007/s10453-025-09880-y
Abdul Zul’Adly Mohaimin, Pooja Shivanand, Sarayu Krishnamoorthy, Hussein Taha

Rice diseases in Brunei Darussalam have not been properly documented. Thus, this study compiled all the types of rice diseases that were documented by the Department of Agriculture and Agrifood (DoAA) in Brunei from 1984 until 2021. This study also conducted brief rice disease inspections at the Wasan paddy field in 2022 and 2023 (4.7884° N, 114.8221° E). Bioaerosol samples were collected using a Hirst-type volumetric sampler throughout the growing season of paddy. The most frequently documented rice diseases in Brunei were leaf spot (frequency of detection 23%), grain discolouration (19%), rice blast (17%), and sheath blight (14%). During disease inspections, we found 15 different types of rice diseases observed including bacterial blight, bacterial streak, brown spot, false smut, grain discolouration, leaf scald, leaf spot, narrow brown spot, neck blast, panicle blast, rice blast, sheath blight, sheath rot, stem rot, and tungro virus. We identified 19 paddy pathogens (16 fungi and 3 bacteria) using morphological characterization and metabarcoding analysis in bioaerosol samples, where these pathogens are commonly known to cause certain types of rice diseases, and we found that these pathogens are associated with some of the observed rice diseases. Our findings provide insight into the role of bioaerosols in disease dissemination towards the paddy crop, so that proper disease management can potentially be employed.

文莱达鲁萨兰国的水稻疾病没有得到适当的记录。因此,本研究汇编了文莱农业和农业食品部(DoAA)从1984年至2021年记录的所有水稻疾病类型。本研究还于2022年和2023年(4.7884°N, 114.8221°E)在Wasan稻田进行了简短的水稻病害检测。在整个水稻生长季节,使用赫斯特式体积取样器收集生物气溶胶样品。文莱最常见的记录水稻病害是叶斑病(检测频率23%)、稻谷变色(19%)、稻瘟病(17%)和纹枯病(14%)。在病害检查中,我们发现了15种不同类型的水稻病害,包括细菌性枯萎病、细菌性条纹病、褐斑病、假黑穗病、籽粒变色、叶片烫伤、叶斑病、窄褐斑病、颈瘟病、穗瘟病、稻瘟病、鞘枯病、鞘腐病、茎腐病和tungro病毒。我们利用生物气溶胶样品的形态特征和元条形码分析鉴定出19种水稻病原体(16种真菌和3种细菌),这些病原体通常会引起某些类型的水稻疾病,我们发现这些病原体与一些观察到的水稻疾病有关。我们的发现提供了生物气溶胶在水稻作物疾病传播中的作用,因此可以采用适当的疾病管理。
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引用次数: 0
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Aerobiologia
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