Gaige Ji, Ming Zhang, Xiaojun Ju, Yifan Liu, Yanju Shan, Yunjie Tu, Jianmin Zou, Jingting Shu, Hua Li, Weidong Zhao
The pectoral muscle is an important component of skeletal muscle. The blackness of pectoral muscles can directly affect the economic value of black-boned chickens. Although the genes associated with melanogenesis in mammals and birds have been thoroughly investigated, only little is known about the key genes involved in muscle hyperpigmentation during embryonic development. Here, we analyzed melanin deposition patterns in the pectoral muscle of Yugan black-boned chickens and compared differentially expressed genes (DEGs) between the muscles of Wenchang (non-black-boned chickens) and Yugan black-boned chickens on embryonic days 9, 13, 17, and 21. Melanin pigments were found to gradually accumulate in the muscle fibers over time. Using RNA-seq, there were 40, 97, 169, and 94 genes were identified as DEGs, respectively, between Yugan black-boned chicken muscles and Wenchang chickens at embryonic day 9, 13, 17, and 21 stages (fold change ≥2.0, false discovery rate (FDR) < 0.05). Thirteen DEGs, such as MSTRG.720, EDNRB2, TYRP1, and DCT, were commonly identified among the time points observed. These DEGs were mainly involved in pigmentation, melanin biosynthetic and metabolic processes, and secondary metabolite biosynthetic processes. Pathway analysis of the DEGs revealed that they were mainly associated with melanogenesis and tyrosine metabolism. Moreover, weighted gene co-expression network analysis (WGCNA) was used to detect core modules and central genes related to melanogenesis in the muscles of black-boned chickens. A total of 24 modules were identified. Correlation analysis indicated that one of them (the orange module) was positively correlated with muscle pigmentation traits (r > 0.8 and p < 0.001). Correlations between gene expression and L* values of the breast muscle were investigated in Yugan and Taihe black-boned chickens after hatching. The results confirmed that EDNRB2, GPNMB, TRPM1, TYR, and DCT expression levels were significantly associated with L* values (p < 0.01) in black-boned chickens (p < 0.05). Our results suggest that EDNRB2, GPNMB, TRPM1, TYR, and DCT are the essential genes regulating melanin deposition in the breast muscle of black-boned chickens. MSTRG.720 is a potential candidate gene involved in melanin deposition in the breast muscles of Yugan black-boned chickens.
{"title":"Dynamic Transcriptome Profile Analysis of Mechanisms Related to Melanin Deposition in Chicken Muscle Development.","authors":"Gaige Ji, Ming Zhang, Xiaojun Ju, Yifan Liu, Yanju Shan, Yunjie Tu, Jianmin Zou, Jingting Shu, Hua Li, Weidong Zhao","doi":"10.3390/ani14182702","DOIUrl":"https://doi.org/10.3390/ani14182702","url":null,"abstract":"<p><p>The pectoral muscle is an important component of skeletal muscle. The blackness of pectoral muscles can directly affect the economic value of black-boned chickens. Although the genes associated with melanogenesis in mammals and birds have been thoroughly investigated, only little is known about the key genes involved in muscle hyperpigmentation during embryonic development. Here, we analyzed melanin deposition patterns in the pectoral muscle of Yugan black-boned chickens and compared differentially expressed genes (DEGs) between the muscles of Wenchang (non-black-boned chickens) and Yugan black-boned chickens on embryonic days 9, 13, 17, and 21. Melanin pigments were found to gradually accumulate in the muscle fibers over time. Using RNA-seq, there were 40, 97, 169, and 94 genes were identified as DEGs, respectively, between Yugan black-boned chicken muscles and Wenchang chickens at embryonic day 9, 13, 17, and 21 stages (fold change ≥2.0, false discovery rate (FDR) < 0.05). Thirteen DEGs, such as <i>MSTRG.720</i>, <i>EDNRB2</i>, <i>TYRP1</i>, and <i>DCT</i>, were commonly identified among the time points observed. These DEGs were mainly involved in pigmentation, melanin biosynthetic and metabolic processes, and secondary metabolite biosynthetic processes. Pathway analysis of the DEGs revealed that they were mainly associated with melanogenesis and tyrosine metabolism. Moreover, weighted gene co-expression network analysis (WGCNA) was used to detect core modules and central genes related to melanogenesis in the muscles of black-boned chickens. A total of 24 modules were identified. Correlation analysis indicated that one of them (the orange module) was positively correlated with muscle pigmentation traits (r > 0.8 and <i>p</i> < 0.001). Correlations between gene expression and L* values of the breast muscle were investigated in Yugan and Taihe black-boned chickens after hatching. The results confirmed that <i>EDNRB2</i>, <i>GPNMB</i>, <i>TRPM1</i>, <i>TYR</i>, and <i>DCT</i> expression levels were significantly associated with L* values (<i>p</i> < 0.01) in black-boned chickens (<i>p</i> < 0.05). Our results suggest that <i>EDNRB2</i>, <i>GPNMB</i>, <i>TRPM1</i>, <i>TYR</i>, and <i>DCT</i> are the essential genes regulating melanin deposition in the breast muscle of black-boned chickens. <i>MSTRG.720</i> is a potential candidate gene involved in melanin deposition in the breast muscles of Yugan black-boned chickens.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11428610/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339638","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pablo Vázquez García, Alejandra Zarzo-Arias, Efrén Vigón Álvarez, Iván Alambiaga, Juan S Monrós
Human activities have resulted in severe habitat degradation and fragmentation at a global scale. Despite this scenario, some carnivore species that adapted to the new conditions are expanding, leading to close coexistence with humans and the emergence of potential conflicts. In this work, we used a European wildcat (Felis silvestris) observations database of more than 350 sightings over 17 years in NW Spain to build suitability models based on environmental, topographic, climatic, and human impact variables. MaxEnt was used to analyse the availability of suitable habitats for the species at a regional scale. Our results showed that less than one third of the suitable area for the species had confirmed wildcat presence. Elevation, the percentage of forested area, and footpath density were the three main variables conditioning wildcat presence, with the first two variables having positive effects and footpath density negatively affecting wildcat presence. The selection of high areas and forest areas by the species seems to be related to food availability, while the avoidance of footpaths seems to be related to the fact that main mortality causes are linked to human disturbances. The results enhance the understanding of the European wildcat ecology and provide insight into potential management plans to ensure the conservation of one of the main populations of the species throughout its range.
{"title":"Modelling the Distribution and Habitat Suitability of the European Wildcat (<i>Felis silvestris</i>) in North-Western Spain and Its Conservation Implications.","authors":"Pablo Vázquez García, Alejandra Zarzo-Arias, Efrén Vigón Álvarez, Iván Alambiaga, Juan S Monrós","doi":"10.3390/ani14182708","DOIUrl":"https://doi.org/10.3390/ani14182708","url":null,"abstract":"<p><p>Human activities have resulted in severe habitat degradation and fragmentation at a global scale. Despite this scenario, some carnivore species that adapted to the new conditions are expanding, leading to close coexistence with humans and the emergence of potential conflicts. In this work, we used a European wildcat (<i>Felis silvestris</i>) observations database of more than 350 sightings over 17 years in NW Spain to build suitability models based on environmental, topographic, climatic, and human impact variables. MaxEnt was used to analyse the availability of suitable habitats for the species at a regional scale. Our results showed that less than one third of the suitable area for the species had confirmed wildcat presence. Elevation, the percentage of forested area, and footpath density were the three main variables conditioning wildcat presence, with the first two variables having positive effects and footpath density negatively affecting wildcat presence. The selection of high areas and forest areas by the species seems to be related to food availability, while the avoidance of footpaths seems to be related to the fact that main mortality causes are linked to human disturbances. The results enhance the understanding of the European wildcat ecology and provide insight into potential management plans to ensure the conservation of one of the main populations of the species throughout its range.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11429425/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339597","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Camila J Asencio, Rupert Palme, Héctor R Ferrari, Mariano L Lattanzi, Gabina V Eguizábal, Juan M Busso
Pig homeostasis is challenged by stressful production practices, like road transportation. Glucocorticoids (GCs) are mediators of reactive homeostasis, and their concentrations are frequently used as a stress indicator. The adrenocortical activity of fattening female and castrated male pigs was monitored over a 5-day longitudinal study. A bi-factorial experimental design was applied on day 2; 18 pigs in pen 1 were transported for 3 h (T; 1.2 m2/pig), and 18 pigs were kept in pen 2 (NT). Ten pigs from each pen were treated with dexamethasone (T-D or NT-D), and eight with saline solution (T-SS or NT-SS). Adrenocortical activity was assessed by measuring the levels of faecal glucocorticoid metabolites (FGMs) and hair cortisol and cortisone. In T-SS pigs, the level of FGMs was higher after transportation than in NT-SS pigs. The level of FGMs of T-D pigs initially increased but then reached similar levels to those of NT-SS sooner than T-SS. In contrast, hair cortisol and cortisone did not respond to the treatments. Nevertheless, the hair cortisone/cortisol ratio increased due to transport and decreased after dexamethasone administration. Daily faecal sampling proved still more reliable than 60-day hair sampling for assessing adrenocortical activity. Transported pigs recovered their adrenocortical baseline levels within 24 h. Dexamethasone attenuated the response to transport.
{"title":"Faecal Glucocorticoid Metabolites and Hair Cortisone/Cortisol Measurements in Domestic Pigs Exposed to Road Transportation and Dexamethasone Treatment.","authors":"Camila J Asencio, Rupert Palme, Héctor R Ferrari, Mariano L Lattanzi, Gabina V Eguizábal, Juan M Busso","doi":"10.3390/ani14182700","DOIUrl":"https://doi.org/10.3390/ani14182700","url":null,"abstract":"<p><p>Pig homeostasis is challenged by stressful production practices, like road transportation. Glucocorticoids (GCs) are mediators of reactive homeostasis, and their concentrations are frequently used as a stress indicator. The adrenocortical activity of fattening female and castrated male pigs was monitored over a 5-day longitudinal study. A bi-factorial experimental design was applied on day 2; 18 pigs in pen 1 were transported for 3 h (T; 1.2 m<sup>2</sup>/pig), and 18 pigs were kept in pen 2 (NT). Ten pigs from each pen were treated with dexamethasone (T-D or NT-D), and eight with saline solution (T-SS or NT-SS). Adrenocortical activity was assessed by measuring the levels of faecal glucocorticoid metabolites (FGMs) and hair cortisol and cortisone. In T-SS pigs, the level of FGMs was higher after transportation than in NT-SS pigs. The level of FGMs of T-D pigs initially increased but then reached similar levels to those of NT-SS sooner than T-SS. In contrast, hair cortisol and cortisone did not respond to the treatments. Nevertheless, the hair cortisone/cortisol ratio increased due to transport and decreased after dexamethasone administration. Daily faecal sampling proved still more reliable than 60-day hair sampling for assessing adrenocortical activity. Transported pigs recovered their adrenocortical baseline levels within 24 h. Dexamethasone attenuated the response to transport.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11429306/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339661","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Zeynab Taheri-Khas, Ahmad Gharzi, Somaye Vaissi, Pouria Heshmatzad, Zahra Kalhori
This study investigates the efficacy of hormone-induced artificial reproduction in goldfish (Carassius auratus) under controlled temperatures. Ovaprim injections significantly enhanced ovulation and sperm production compared to controls. Medium temperature (22 °C) produced the highest ovulation rates, fastest ovulation timing, and optimal sperm quality (motility and morphology) compared to high (28 °C) and low (16 °C) temperature groups. The low-temperature group exhibited reduced sperm motility duration and higher rates of sperm and larvae damage. The sperm volume of the high-temperature group was higher, but their post-injection survival rates were lower. Furthermore, the lowest spawning rate and low egg quality were noted in the high temperature. Cryopreservation using extender E4 (15% DMSO) exhibited superior post-thaw sperm motility and achieved higher fertilization rates. Fertilization rates, embryo development, and larval survival were all highest at the medium temperature. Larvae hatched from fresh sperm at medium temperature exhibited faster growth and fewer deformities. These findings suggest that hormone stimulation coupled with a medium temperature regimen is critical for successful artificial reproduction in goldfish. Cryopreservation with extender E4 holds promise for sperm banking; however, further optimization is necessary to improve fertilization success with thawed sperm. Future research could explore the influence of temperature on sperm physiology and refine cryopreservation protocols to enhance fertilization rates.
{"title":"Hormone-Driven Temperature Optimization for Elevated Reproduction in Goldfish (<i>Carassius auratus</i>) under Laboratory Conditions.","authors":"Zeynab Taheri-Khas, Ahmad Gharzi, Somaye Vaissi, Pouria Heshmatzad, Zahra Kalhori","doi":"10.3390/ani14182701","DOIUrl":"10.3390/ani14182701","url":null,"abstract":"<p><p>This study investigates the efficacy of hormone-induced artificial reproduction in goldfish (<i>Carassius auratus</i>) under controlled temperatures. Ovaprim injections significantly enhanced ovulation and sperm production compared to controls. Medium temperature (22 °C) produced the highest ovulation rates, fastest ovulation timing, and optimal sperm quality (motility and morphology) compared to high (28 °C) and low (16 °C) temperature groups. The low-temperature group exhibited reduced sperm motility duration and higher rates of sperm and larvae damage. The sperm volume of the high-temperature group was higher, but their post-injection survival rates were lower. Furthermore, the lowest spawning rate and low egg quality were noted in the high temperature. Cryopreservation using extender E4 (15% DMSO) exhibited superior post-thaw sperm motility and achieved higher fertilization rates. Fertilization rates, embryo development, and larval survival were all highest at the medium temperature. Larvae hatched from fresh sperm at medium temperature exhibited faster growth and fewer deformities. These findings suggest that hormone stimulation coupled with a medium temperature regimen is critical for successful artificial reproduction in goldfish. Cryopreservation with extender E4 holds promise for sperm banking; however, further optimization is necessary to improve fertilization success with thawed sperm. Future research could explore the influence of temperature on sperm physiology and refine cryopreservation protocols to enhance fertilization rates.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11444195/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142336248","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The Galapagos Marine Reserve is vital for cetaceans, serving as both a stopover and residency site. However, blue whales, occasionally sighted here, exhibit poorly understood migratory behavior within the Galapagos and the broader Eastern Tropical Pacific. This study, the first to satellite tag blue whales in the Galapagos (16 tagged between 2021 and 2023), explored their behavior in relation to environmental variables like chlorophyll-a concentration, sea surface temperature (SST), and productivity. Key findings show a strong correlation between foraging behavior, high chlorophyll-a levels, productivity, and lower SSTs, indicating a preference for food-rich areas. Additionally, there is a notable association with geomorphic features like ridges, which potentially enhance food abundance. Most tagged whales stayed near the Galapagos archipelago, with higher concentrations observed around Isabela Island, which is increasingly frequented by tourist vessels, posing heightened ship strike risks. Some whales ventured into Ecuador's exclusive economic zone, while one migrated southward to Peru. The strong 2023 El Niño-Southern Oscillation event led to SST and primary production changes, likely impacting whale resource availability. Our study provides crucial insights into blue whale habitat utilization, informing adaptive management strategies to mitigate ship strike risks and address altered migration routes due to climate-driven environmental shifts.
{"title":"Insights into Blue Whale (<i>Balaenoptera musculus</i> L.) Population Movements in the Galapagos Archipelago and Southeast Pacific.","authors":"Hector M Guzman, Rocío M Estévez, Stefanie Kaiser","doi":"10.3390/ani14182707","DOIUrl":"https://doi.org/10.3390/ani14182707","url":null,"abstract":"<p><p>The Galapagos Marine Reserve is vital for cetaceans, serving as both a stopover and residency site. However, blue whales, occasionally sighted here, exhibit poorly understood migratory behavior within the Galapagos and the broader Eastern Tropical Pacific. This study, the first to satellite tag blue whales in the Galapagos (16 tagged between 2021 and 2023), explored their behavior in relation to environmental variables like chlorophyll-a concentration, sea surface temperature (SST), and productivity. Key findings show a strong correlation between foraging behavior, high chlorophyll-a levels, productivity, and lower SSTs, indicating a preference for food-rich areas. Additionally, there is a notable association with geomorphic features like ridges, which potentially enhance food abundance. Most tagged whales stayed near the Galapagos archipelago, with higher concentrations observed around Isabela Island, which is increasingly frequented by tourist vessels, posing heightened ship strike risks. Some whales ventured into Ecuador's exclusive economic zone, while one migrated southward to Peru. The strong 2023 El Niño-Southern Oscillation event led to SST and primary production changes, likely impacting whale resource availability. Our study provides crucial insights into blue whale habitat utilization, informing adaptive management strategies to mitigate ship strike risks and address altered migration routes due to climate-driven environmental shifts.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11428603/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339667","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jianqiang Tang, Qi Wang, Hailiang Yu, Liyue Dong, Meihui Tang, Areej Arif, Genxi Zhang, Tao Zhang, Kaizhou Xie, Shijie Su, Zhenhua Zhao, Guojun Dai
To investigate the effect of Eimeria tenella (E. tenella) infection on the cecal microbiota, resistant and susceptible families were screened out based on the coccidiosis resistance evaluation indexes after E. tenella infection. Subsequently, a comparative analysis of cecal microorganisms among control, resistant, and susceptible groups as well as between different periods following the E. tenella challenge was conducted using metagenomic sequencing technology. The results showed that the abundance of opportunistic pathogens, such as Pantoea, Sporomusa, and Pasteurella in the susceptible group and Helicobacter and Sutterella in the resistant group, was significantly higher on day 27 post-inoculation (PI) (the recovery period) than on day 5 PI (the infection period). Additionally, the abundance of Alistipes, Butyricicoccus, and Eubacterium in the susceptible group and Coprococcus, Roseburia, Butyricicoccus, and Lactobacillus in the resistant group showed a significant upward trend during the infection period compared with that in the recovery period. On day 5 PI, the abundance of Faecalibacterium and Lactobacillus was decreased in both the resistant and susceptible groups when compared with that in the control group and was greater in the resistant group than in the susceptible group, while Alistipes in the susceptible group had a relatively higher abundance than that in other groups. A total of 49 biomarker taxa were identified using the linear discriminant analysis (LDA) effect size (LEfSe) method. Of these, the relative abundance of Lactobacillus aviarius, Lactobacillus salivarius, Roseburia, and Ruminococcus gauvreauii was increased in the resistant group, while Bacteroides_sp__AGMB03916, Fusobacterium_mortiferum, Alistipes_sp__An31A, and Alistipes_sp__Marseille_P5061 were enriched in the susceptible group. On day 27 PI, LDA scores identified 43 biomarkers, among which the relative abundance of Elusimicrobium_sp__An273 and Desulfovibrio_sp__An276 was increased in the resistant group, while that of Bacteroides_sp__43_108, Chlamydiia, Chlamydiales, and Sutterella_sp__AM11 39 was augmented in the susceptible group. Our results indicated that E. tenella infection affects the structure of the cecal microbiota during both the challenge and recovery periods. These findings will enhance the understanding of the effects of changes in the cecal microbiota on chickens after coccidia infection and provide a reference for further research on the mechanisms underlying how the intestinal microbiota influence the growth and health of chickens.
{"title":"A Comparison of the Cecal Microbiota between the Infection and Recovery Periods in Chickens with Different Susceptibilities to <i>Eimeria tenella</i>.","authors":"Jianqiang Tang, Qi Wang, Hailiang Yu, Liyue Dong, Meihui Tang, Areej Arif, Genxi Zhang, Tao Zhang, Kaizhou Xie, Shijie Su, Zhenhua Zhao, Guojun Dai","doi":"10.3390/ani14182709","DOIUrl":"https://doi.org/10.3390/ani14182709","url":null,"abstract":"<p><p>To investigate the effect of <i>Eimeria tenella</i> (<i>E. tenella</i>) infection on the cecal microbiota, resistant and susceptible families were screened out based on the coccidiosis resistance evaluation indexes after <i>E. tenella</i> infection. Subsequently, a comparative analysis of cecal microorganisms among control, resistant, and susceptible groups as well as between different periods following the <i>E. tenella</i> challenge was conducted using metagenomic sequencing technology. The results showed that the abundance of opportunistic pathogens, such as <i>Pantoea</i>, <i>Sporomusa</i>, and <i>Pasteurella</i> in the susceptible group and <i>Helicobacter</i> and <i>Sutterella</i> in the resistant group, was significantly higher on day 27 post-inoculation (PI) (the recovery period) than on day 5 PI (the infection period). Additionally, the abundance of <i>Alistipes</i>, <i>Butyricicoccus</i>, and <i>Eubacterium</i> in the susceptible group and <i>Coprococcus</i>, <i>Roseburia</i>, <i>Butyricicoccus</i>, and <i>Lactobacillus</i> in the resistant group showed a significant upward trend during the infection period compared with that in the recovery period. On day 5 PI, the abundance of <i>Faecalibacterium</i> and <i>Lactobacillus</i> was decreased in both the resistant and susceptible groups when compared with that in the control group and was greater in the resistant group than in the susceptible group, while <i>Alistipes</i> in the susceptible group had a relatively higher abundance than that in other groups. A total of 49 biomarker taxa were identified using the linear discriminant analysis (LDA) effect size (LEfSe) method. Of these, the relative abundance of <i>Lactobacillus aviarius</i>, <i>Lactobacillus salivarius</i>, <i>Roseburia</i>, and <i>Ruminococcus gauvreauii</i> was increased in the resistant group, while <i>Bacteroides_sp__AGMB03916</i>, <i>Fusobacterium_mortiferum</i>, <i>Alistipes_sp__An31A</i>, and <i>Alistipes_sp__Marseille_P5061</i> were enriched in the susceptible group. On day 27 PI, LDA scores identified 43 biomarkers, among which the relative abundance of <i>Elusimicrobium_sp__An273</i> and <i>Desulfovibrio_sp__An276</i> was increased in the resistant group, while that of <i>Bacteroides_sp__43_108</i>, <i>Chlamydiia</i>, <i>Chlamydiales</i>, and <i>Sutterella_sp__AM11 39</i> was augmented in the susceptible group. Our results indicated that <i>E. tenella</i> infection affects the structure of the cecal microbiota during both the challenge and recovery periods. These findings will enhance the understanding of the effects of changes in the cecal microbiota on chickens after coccidia infection and provide a reference for further research on the mechanisms underlying how the intestinal microbiota influence the growth and health of chickens.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11428751/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339593","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Fernando Mata, Inês Franca, José Araújo, Gustavo Paixão, Kirsty Lesniak, Joaquim Lima Cerqueira
Hoof trimming and shoeing determine the horse's hoof shape and balance. Hoof conformation plays a crucial role in limb biomechanics and can consequently prevent or predispose to injury. This study investigated the relationship between the morphometric characteristics of the horse's hoof, specifically, the dorsal hoof wall angle (DHWA), the coronet band circumference (CBC), and lameness in 73 horses categorised as undertaking either show jumping, dressage, or riding school activities. Results from logistic regression indicated that horses with either a combination of acute DHWA with large CBC, or more upright feet with larger DHWA and smaller CBC have higher probabilities of lameness. Show jumping and dressage horses showed a higher prevalence of lameness. Hoof morphometry should be monitored, and podiatric interventions should be regularly scheduled for the maintenance of correct hoof conformation to prevent injury. This study suggests that an aligned hoof-pastern axis managed by a DHWA of around 50 degrees may prevent lameness, with special emphasis on horses in dressage and show jumping activities. On the other hand, we can also speculate that the disturbed axis alignment of DHWA may be a cause of lameness.
{"title":"Investigating Associations between Horse Hoof Conformation and Presence of Lameness.","authors":"Fernando Mata, Inês Franca, José Araújo, Gustavo Paixão, Kirsty Lesniak, Joaquim Lima Cerqueira","doi":"10.3390/ani14182697","DOIUrl":"10.3390/ani14182697","url":null,"abstract":"<p><p>Hoof trimming and shoeing determine the horse's hoof shape and balance. Hoof conformation plays a crucial role in limb biomechanics and can consequently prevent or predispose to injury. This study investigated the relationship between the morphometric characteristics of the horse's hoof, specifically, the dorsal hoof wall angle (DHWA), the coronet band circumference (CBC), and lameness in 73 horses categorised as undertaking either show jumping, dressage, or riding school activities. Results from logistic regression indicated that horses with either a combination of acute DHWA with large CBC, or more upright feet with larger DHWA and smaller CBC have higher probabilities of lameness. Show jumping and dressage horses showed a higher prevalence of lameness. Hoof morphometry should be monitored, and podiatric interventions should be regularly scheduled for the maintenance of correct hoof conformation to prevent injury. This study suggests that an aligned hoof-pastern axis managed by a DHWA of around 50 degrees may prevent lameness, with special emphasis on horses in dressage and show jumping activities. On the other hand, we can also speculate that the disturbed axis alignment of DHWA may be a cause of lameness.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11444133/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Daniel Mota-Rojas, Cécile Bienboire-Frosini, Agustín Orihuela, Adriana Domínguez-Oliva, Dina Villanueva García, Patricia Mora-Medina, Alex Cuibus, Fabio Napolitano, Temple Grandin
The cow-calf bonding is a process that must be developed within the first six hours after calving. Both the buffalo dam and the newborn calf receive a series of sensory cues during calving, including olfactory, tactile, auditory, and visual stimuli. These inputs are processed in the brain to develop an exclusive bond where the dam provides selective care to the filial newborn. The limbic system, sensory cortices, and maternal-related hormones such as oxytocin mediate this process. Due to the complex integration of the maternal response towards the newborn, this paper aims to review the development of the cow-calf bonding process in water buffalo (Bubalus bubalis) via the olfactory, tactile, auditory, and visual stimuli. It will also discuss the neuroendocrine factors motivating buffalo cows to care for the calf using examples in other ruminant species where dam-newborn bonding has been extensively studied.
{"title":"Mother-Offspring Bonding after Calving in Water Buffalo and Other Ruminants: Sensory Pathways and Neuroendocrine Aspects.","authors":"Daniel Mota-Rojas, Cécile Bienboire-Frosini, Agustín Orihuela, Adriana Domínguez-Oliva, Dina Villanueva García, Patricia Mora-Medina, Alex Cuibus, Fabio Napolitano, Temple Grandin","doi":"10.3390/ani14182696","DOIUrl":"https://doi.org/10.3390/ani14182696","url":null,"abstract":"<p><p>The cow-calf bonding is a process that must be developed within the first six hours after calving. Both the buffalo dam and the newborn calf receive a series of sensory cues during calving, including olfactory, tactile, auditory, and visual stimuli. These inputs are processed in the brain to develop an exclusive bond where the dam provides selective care to the filial newborn. The limbic system, sensory cortices, and maternal-related hormones such as oxytocin mediate this process. Due to the complex integration of the maternal response towards the newborn, this paper aims to review the development of the cow-calf bonding process in water buffalo (<i>Bubalus bubalis</i>) via the olfactory, tactile, auditory, and visual stimuli. It will also discuss the neuroendocrine factors motivating buffalo cows to care for the calf using examples in other ruminant species where dam-newborn bonding has been extensively studied.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11428873/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339598","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Barbara Peťková, Lenka Skurková, Martin Florian, Monika Slivková, Zuzana Dudra Kasičová, Jana Kottferová
Dog breeds are grouped based on scientific agreement, whether for traditional reasons or specific tasks during their domestication. Discrepancies may occur between public views of breed behaviour and actual evidence. This research aims to investigate differences in five behavioural traits (aggression towards people, aggression towards animals, fearfulness, responsiveness to training, and activity/excitability) by using the Dog Personality Questionnaire (DPQ) across six conventional groups/clusters of dog breeds (herding, hunting, guarding, companion dogs, potentially aggressive breeds, and mixed-breed dogs) and to assess hypotheses derived from common public presumptions. A cohort of 1309 dog owners sourced through diverse online platforms took part in the study. Contrary to stereotypes, the findings indicate that breeds labelled as "potentially aggressive" display lower levels of aggression compared to guarding breeds (χ2 (5) = 3.657, p = 0.041) and mixed-breeds (χ2 (5) = 3.870, p = 0.002). Additionally, mixed-breed dogs exhibited the highest levels of fearfulness among the six conventional clusters. In terms of aggression and gender, males demonstrated higher aggression levels towards both humans and animals compared to females (p = 0.001). These results challenge established assumptions and emphasise the necessity of evidence-based methodologies in the assessment of canine behaviour.
{"title":"Variations in Canine Behavioural Characteristics across Conventional Breed Clusters and Most Common Breed-Based Public Stereotypes.","authors":"Barbara Peťková, Lenka Skurková, Martin Florian, Monika Slivková, Zuzana Dudra Kasičová, Jana Kottferová","doi":"10.3390/ani14182695","DOIUrl":"https://doi.org/10.3390/ani14182695","url":null,"abstract":"<p><p>Dog breeds are grouped based on scientific agreement, whether for traditional reasons or specific tasks during their domestication. Discrepancies may occur between public views of breed behaviour and actual evidence. This research aims to investigate differences in five behavioural traits (aggression towards people, aggression towards animals, fearfulness, responsiveness to training, and activity/excitability) by using the Dog Personality Questionnaire (DPQ) across six conventional groups/clusters of dog breeds (herding, hunting, guarding, companion dogs, potentially aggressive breeds, and mixed-breed dogs) and to assess hypotheses derived from common public presumptions. A cohort of 1309 dog owners sourced through diverse online platforms took part in the study. Contrary to stereotypes, the findings indicate that breeds labelled as \"potentially aggressive\" display lower levels of aggression compared to guarding breeds (χ<sup>2</sup> (5) = 3.657, <i>p</i> = 0.041) and mixed-breeds (χ<sup>2</sup> (5) = 3.870, <i>p</i> = 0.002). Additionally, mixed-breed dogs exhibited the highest levels of fearfulness among the six conventional clusters. In terms of aggression and gender, males demonstrated higher aggression levels towards both humans and animals compared to females (<i>p</i> = 0.001). These results challenge established assumptions and emphasise the necessity of evidence-based methodologies in the assessment of canine behaviour.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11429495/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339716","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The prevention of disease introduction into swine herds requires the practice of science-based protocols of biosecurity that have been validated to reduce the risk of the entry of targeted pathogens. The fundamental pillars of biosecurity include bio-exclusion, biocontainment, and bio-management. Biosecurity protocols must be science-based, a way of life, continuously validated, cost-effective, and benchmarked over time. This paper will review these concepts, the direct and indirect routes of transmission of porcine reproductive and respiratory syndrome virus (PRRSV), and the interventions that have been designed and validated to prevent infection of the breeding herd. It will close with a review of Next Generation Biosecurity, describing how a science-based approach is being used to prevent PRRSV infection in breeding herds from a large commercial pork production system in the US.
{"title":"A Review of Swine Breeding Herd Biosecurity in the United States to Prevent Virus Entry Using Porcine Reproductive and Respiratory Syndrome Virus as a Model Pathogen.","authors":"Satoshi Otake, Mio Yoshida, Scott Dee","doi":"10.3390/ani14182694","DOIUrl":"10.3390/ani14182694","url":null,"abstract":"<p><p>The prevention of disease introduction into swine herds requires the practice of science-based protocols of biosecurity that have been validated to reduce the risk of the entry of targeted pathogens. The fundamental pillars of biosecurity include bio-exclusion, biocontainment, and bio-management. Biosecurity protocols must be science-based, a way of life, continuously validated, cost-effective, and benchmarked over time. This paper will review these concepts, the direct and indirect routes of transmission of porcine reproductive and respiratory syndrome virus (PRRSV), and the interventions that have been designed and validated to prevent infection of the breeding herd. It will close with a review of Next Generation Biosecurity, describing how a science-based approach is being used to prevent PRRSV infection in breeding herds from a large commercial pork production system in the US.</p>","PeriodicalId":7955,"journal":{"name":"Animals","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11440104/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339603","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}