首页 > 最新文献

Apmis最新文献

英文 中文
The Function of B and T Lymphocyte Attenuator and Its Role in Transplantation
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-03-05 DOI: 10.1111/apm.70012
Kai Ma, Heqiao Han, Yuchen Bao, Rongtao Chen, Yixuan Yang, Wenwei Shao

Immune checkpoints are important molecules that regulate the immune response, preventing its overactivation from causing tissue damage and autoimmune diseases. B and T lymphocyte attenuator (BTLA) plays an important role in regulating the activation and suppression of the immune response as part of a bidirectional signaling complex. The BTLA and its ligand herpesvirus entry mediator (HVEM) interaction transmits inhibitory signals that suppress the biological activity of T cells, B cells, and DCs. In addition, BTLA–HVEM can affect the induction of Treg cells, further suggesting its important role in immune regulation. Organ transplantation is the ultimate treatment option for many patients with end-stage organ failure. Transplant rejection can cause damage to the transplanted organ, which seriously affects the prognosis of patients. Therefore, we would like to explore the potential application value of the BTLA–HVEM interaction to exert an immunosuppressive function and thus attenuate transplant rejection. We first reviewed the structure and function of BTLA and HVEM, then summarized their research progress in organ transplantation, and further explored the directions of potential future applications and the challenges of current BTLA–HVEM applications.

{"title":"The Function of B and T Lymphocyte Attenuator and Its Role in Transplantation","authors":"Kai Ma,&nbsp;Heqiao Han,&nbsp;Yuchen Bao,&nbsp;Rongtao Chen,&nbsp;Yixuan Yang,&nbsp;Wenwei Shao","doi":"10.1111/apm.70012","DOIUrl":"https://doi.org/10.1111/apm.70012","url":null,"abstract":"<div>\u0000 \u0000 <p>Immune checkpoints are important molecules that regulate the immune response, preventing its overactivation from causing tissue damage and autoimmune diseases. B and T lymphocyte attenuator (BTLA) plays an important role in regulating the activation and suppression of the immune response as part of a bidirectional signaling complex. The BTLA and its ligand herpesvirus entry mediator (HVEM) interaction transmits inhibitory signals that suppress the biological activity of T cells, B cells, and DCs. In addition, BTLA–HVEM can affect the induction of Treg cells, further suggesting its important role in immune regulation. Organ transplantation is the ultimate treatment option for many patients with end-stage organ failure. Transplant rejection can cause damage to the transplanted organ, which seriously affects the prognosis of patients. Therefore, we would like to explore the potential application value of the BTLA–HVEM interaction to exert an immunosuppressive function and thus attenuate transplant rejection. We first reviewed the structure and function of BTLA and HVEM, then summarized their research progress in organ transplantation, and further explored the directions of potential future applications and the challenges of current BTLA–HVEM applications.</p>\u0000 </div>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143554810","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluating the Efficacy of Capreomycin and Levofloxacin Combination Therapy in Multidrug-Resistant Tuberculosis Patients
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-03-04 DOI: 10.1111/apm.70004
Sheng Xu, Guozheng Ding

Capreomycin (CMN) paired with levofloxacin (LEV) was tested in patients with multidrug-resistant pulmonary tuberculosis (MDR-PTB) for efficacy and immune function. The control group (40 cases) received conventional treatment and the observation group (40 cases) received CMN combined with LEV were established. Three months of intensification therapy and eighteen months of consolidation therapy were performed. The therapeutic effects (sputum negative conversion, lesion absorption, cavity shrinkage, and total effective rates), CD4+, CD8+, immunoglobulin A (IgA), IgM, IgG, interleukin-6 (IL-6), IL-17, tumor necrosis factor-α (TNF-α), serum alkaline phosphatase (ALP), aspartate aminotransferase (ALT), and alanine aminotransferase (AST) were assessed. Adverse reactions were compared. After treatment, the observation group performed at a higher sputum negative conversion rate, lesion absorption rate, cavity shrinkage rate, and total effective rate than the control group; CD4+, IgA, IgM, IgG, and IL-17 were increased and CD8+, IL-6, and TNF-α were decreased in both groups, and all of them were improved significantly in the observation group; ALP, ALT, and AST were elevated in both groups, but the differences between the observation and control groups were comparable. CMN combined with LEV is highly effective for MDR-PTB patients, enhancing immune function and reducing inflammation while having minimal effects on liver function.

{"title":"Evaluating the Efficacy of Capreomycin and Levofloxacin Combination Therapy in Multidrug-Resistant Tuberculosis Patients","authors":"Sheng Xu,&nbsp;Guozheng Ding","doi":"10.1111/apm.70004","DOIUrl":"https://doi.org/10.1111/apm.70004","url":null,"abstract":"<div>\u0000 \u0000 <p>Capreomycin (CMN) paired with levofloxacin (LEV) was tested in patients with multidrug-resistant pulmonary tuberculosis (MDR-PTB) for efficacy and immune function. The control group (40 cases) received conventional treatment and the observation group (40 cases) received CMN combined with LEV were established. Three months of intensification therapy and eighteen months of consolidation therapy were performed. The therapeutic effects (sputum negative conversion, lesion absorption, cavity shrinkage, and total effective rates), CD4<sup>+</sup>, CD8<sup>+</sup>, immunoglobulin A (IgA), IgM, IgG, interleukin-6 (IL-6), IL-17, tumor necrosis factor-α (TNF-α), serum alkaline phosphatase (ALP), aspartate aminotransferase (ALT), and alanine aminotransferase (AST) were assessed. Adverse reactions were compared. After treatment, the observation group performed at a higher sputum negative conversion rate, lesion absorption rate, cavity shrinkage rate, and total effective rate than the control group; CD4<sup>+</sup>, IgA, IgM, IgG, and IL-17 were increased and CD8<sup>+</sup>, IL-6, and TNF-α were decreased in both groups, and all of them were improved significantly in the observation group; ALP, ALT, and AST were elevated in both groups, but the differences between the observation and control groups were comparable. CMN combined with LEV is highly effective for MDR-PTB patients, enhancing immune function and reducing inflammation while having minimal effects on liver function.</p>\u0000 </div>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143554772","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prevalence and Co-Detection Rates of SARS-CoV-2, Influenza, and Respiratory Syncytial Virus: A Retrospective Analysis
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-02-27 DOI: 10.1111/apm.70010
George W. Pratt, Carlene L. Wong, Lokinendi V. Rao

In late 2022, there was a significant increase in the prevalence of RSV in the northeastern United States. This surge occurred concurrently with the beginning of the traditional influenza season and the ongoing circulation of SARS-CoV-2. We retrospectively analyzed respiratory testing data at a regional reference laboratory from September 2022 to April 2024 to characterize the prevalence and incidence of co-detection of RSV, influenza A, influenza B, and SARS-CoV-2 in the northeastern United States. The positivity rates were found to be 16.68% for SARS-CoV-2, 11.66% for influenza A, 0.83% for influenza B, and 9.11% for RSV during the study period. Co-detections were observed in 0.49% of samples, with SARS-CoV-2/influenza A co-detection being the most common. Co-detections occurred less frequently than expected based on individual positivity rates. During the study period, influenza B positivity increased over 10-fold, SARS-CoV-2 positivity decreased by 60%, and co-detection was more prevalent in the pediatric population.

{"title":"Prevalence and Co-Detection Rates of SARS-CoV-2, Influenza, and Respiratory Syncytial Virus: A Retrospective Analysis","authors":"George W. Pratt,&nbsp;Carlene L. Wong,&nbsp;Lokinendi V. Rao","doi":"10.1111/apm.70010","DOIUrl":"https://doi.org/10.1111/apm.70010","url":null,"abstract":"<div>\u0000 \u0000 <p>In late 2022, there was a significant increase in the prevalence of RSV in the northeastern United States. This surge occurred concurrently with the beginning of the traditional influenza season and the ongoing circulation of SARS-CoV-2. We retrospectively analyzed respiratory testing data at a regional reference laboratory from September 2022 to April 2024 to characterize the prevalence and incidence of co-detection of RSV, influenza A, influenza B, and SARS-CoV-2 in the northeastern United States. The positivity rates were found to be 16.68% for SARS-CoV-2, 11.66% for influenza A, 0.83% for influenza B, and 9.11% for RSV during the study period. Co-detections were observed in 0.49% of samples, with SARS-CoV-2/influenza A co-detection being the most common. Co-detections occurred less frequently than expected based on individual positivity rates. During the study period, influenza B positivity increased over 10-fold, SARS-CoV-2 positivity decreased by 60%, and co-detection was more prevalent in the pediatric population.</p>\u0000 </div>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143513468","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An Evaluation Into the Robustness of Grading of Pleural Mesothelioma Outside of Specialist Centres
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-02-27 DOI: 10.1111/apm.70006
Sarita Prabhakaran, Ashleigh J. Hocking, Yazad Irani, Matthew Hussey, Andrey Alexeyenko, Katalin Dobra, Tamás Micsik, Edwina Duhig, Ann E. Walts, Lieve Vanwalleghem, Vathana Chhut, Anja C. Roden, Victor L. Roggli, Marjan Hertoghs, Francoise Galateau-Salle, Luka Brcic, David Moffat, Sonja Klebe

The 2021 WHO classification of thoracic tumours recommends grading pleural mesothelioma to aid prognostication. Robustness of grading and morphological characterisation is key to its clinical utility, though validation of this grading system has largely been conducted by expert thoracic pathologists. We conducted a survey inviting pathologists across a range of practices and expertise to grade digitised images of 50 epithelioid pleural mesotheliomas that had been graded by an expert in thoracic pathology. We included slides that were considered potentially problematic such as small biopsies, focal necrosis, and rare subtypes that may affect grading (small cell and deciduoid features). Using the Sectra Uniview web viewer, participants were asked to score atypia, mitotic count, and necrosis and choose from a list of cytological and architectural features. Seventy-four pathologists anonymously participated. There was 90% agreement of consensus scores with expert opinion using the WHO 2-tier grade and 72% for the 3-tier nuclear grade but only 70% for nuclear atypia, 56% for mitoses, and 84% for necrosis. Both 3-tier nuclear grade and WHO 2-tier grading systems were significantly associated with survival. Our study affirms the overall robustness and utility of grading for pleural mesothelioma, reveals variances, and suggests the need for dedicated training.

{"title":"An Evaluation Into the Robustness of Grading of Pleural Mesothelioma Outside of Specialist Centres","authors":"Sarita Prabhakaran,&nbsp;Ashleigh J. Hocking,&nbsp;Yazad Irani,&nbsp;Matthew Hussey,&nbsp;Andrey Alexeyenko,&nbsp;Katalin Dobra,&nbsp;Tamás Micsik,&nbsp;Edwina Duhig,&nbsp;Ann E. Walts,&nbsp;Lieve Vanwalleghem,&nbsp;Vathana Chhut,&nbsp;Anja C. Roden,&nbsp;Victor L. Roggli,&nbsp;Marjan Hertoghs,&nbsp;Francoise Galateau-Salle,&nbsp;Luka Brcic,&nbsp;David Moffat,&nbsp;Sonja Klebe","doi":"10.1111/apm.70006","DOIUrl":"https://doi.org/10.1111/apm.70006","url":null,"abstract":"<p>The 2021 WHO classification of thoracic tumours recommends grading pleural mesothelioma to aid prognostication. Robustness of grading and morphological characterisation is key to its clinical utility, though validation of this grading system has largely been conducted by expert thoracic pathologists. We conducted a survey inviting pathologists across a range of practices and expertise to grade digitised images of 50 epithelioid pleural mesotheliomas that had been graded by an expert in thoracic pathology. We included slides that were considered potentially problematic such as small biopsies, focal necrosis, and rare subtypes that may affect grading (small cell and deciduoid features). Using the Sectra Uniview web viewer, participants were asked to score atypia, mitotic count, and necrosis and choose from a list of cytological and architectural features. Seventy-four pathologists anonymously participated. There was 90% agreement of consensus scores with expert opinion using the WHO 2-tier grade and 72% for the 3-tier nuclear grade but only 70% for nuclear atypia, 56% for mitoses, and 84% for necrosis. Both 3-tier nuclear grade and WHO 2-tier grading systems were significantly associated with survival. Our study affirms the overall robustness and utility of grading for pleural mesothelioma, reveals variances, and suggests the need for dedicated training.</p>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/apm.70006","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143513467","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pan-Cancer Analysis Reveals SKA3 as a Potential Diagnostic and Prognostic Biomarker 泛癌症分析发现 SKA3 是一种潜在的诊断和预后生物标记物
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-02-25 DOI: 10.1111/apm.70009
Chunlin Li, Min Gao, Hua Huang, Nashunbayaer Zha, Gang Guo

SKA3, an important factor in cell cycle regulation, is involved in spindle assembly and kinetochore function, playing a critical role in maintaining cancer cell proliferation and division. However, its specific roles and regulatory mechanisms in cancer remain not fully understood. Large-scale datasets from multiple public databases, including The Cancer Genome Atlas and Genotype-Tissue Expression, covering various cancer types, were integrated. Systematic analysis revealed that SKA3 exhibits aberrant expression patterns in multiple cancers and is significantly associated with tumor progression and poor patient prognosis in certain cancers. We explored the status of SKA3 gene mutation, gene amplification and promoter region methylation in various tumors. In the context of immunotherapy, we assessed the value of SKA3 in cancer. Analyzing the correlation between SKA3 expression levels and immune checkpoints and immune cell infiltration, we discovered that SKA3 could serve as a novel immunotherapy biomarker across multiple cancers, guiding clinical immunotherapy decisions. Finally, SKA3 knockdown inhibited lung adenocarcinoma cell proliferation and metastasis. In conclusion, this study provides new insights into the role of SKA3 in cancer and offers significant theoretical and experimental evidence for its development as a diagnostic and prognostic biomarker.

{"title":"Pan-Cancer Analysis Reveals SKA3 as a Potential Diagnostic and Prognostic Biomarker","authors":"Chunlin Li,&nbsp;Min Gao,&nbsp;Hua Huang,&nbsp;Nashunbayaer Zha,&nbsp;Gang Guo","doi":"10.1111/apm.70009","DOIUrl":"https://doi.org/10.1111/apm.70009","url":null,"abstract":"<div>\u0000 \u0000 <p>SKA3, an important factor in cell cycle regulation, is involved in spindle assembly and kinetochore function, playing a critical role in maintaining cancer cell proliferation and division. However, its specific roles and regulatory mechanisms in cancer remain not fully understood. Large-scale datasets from multiple public databases, including The Cancer Genome Atlas and Genotype-Tissue Expression, covering various cancer types, were integrated. Systematic analysis revealed that SKA3 exhibits aberrant expression patterns in multiple cancers and is significantly associated with tumor progression and poor patient prognosis in certain cancers. We explored the status of SKA3 gene mutation, gene amplification and promoter region methylation in various tumors. In the context of immunotherapy, we assessed the value of SKA3 in cancer. Analyzing the correlation between SKA3 expression levels and immune checkpoints and immune cell infiltration, we discovered that SKA3 could serve as a novel immunotherapy biomarker across multiple cancers, guiding clinical immunotherapy decisions. Finally, SKA3 knockdown inhibited lung adenocarcinoma cell proliferation and metastasis. In conclusion, this study provides new insights into the role of SKA3 in cancer and offers significant theoretical and experimental evidence for its development as a diagnostic and prognostic biomarker.</p>\u0000 </div>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143489744","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Role of Ancillary Techniques in the Differential Diagnosis of Salivary Gland Carcinomas
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-02-19 DOI: 10.1111/apm.70008
António Paiva-Correia, Henrik Hellquist, Joana Apolónio, Pedro Castelo-Branco

Paiva-Correia A, Hellquist H, Apolónio J, Castelo-Branco P. Role of ancillary techniques in the differential diagnosis of salivary gland carcinomas. The diagnosis of salivary gland carcinomas (SGC) rests mainly on histology, but immunohistochemical and molecular investigations are often necessary for differential diagnosis. This review is primarily aimed as a tool for pathologists in non-specialised head and neck hospitals who encounter a limited number of SGC annually. The use of testing an initial antibody panel, which may comprise both positive and negative expression for a suspected entity, and examples of different panels are outlined. We also focused on acinic cell carcinoma (AcCC), which is positive for DOG1 and negative for mammaglobin, whilst secretory carcinoma (SC) is positive for mammaglobin and negative for DOG1. In addition, the exclusive expression of androgen and HER2 in salivary duct carcinoma (SDC) and its use for differential diagnosis are also addressed. This review also highlights the particularities of mucoepidermoid carcinoma (MEC) and its negativity for S100 and SOX10, which distinguishes it from some of its mimics. In laboratories with limited access to antibodies for SGC, we recommend inclusion of mammaglobin. The use of molecular techniques for the diagnosis of MEC (MAML2), SC (ETV6), adenoid cystic carcinoma (MYB), and AcCC (NR4A3) is discussed. We highlight the role of commonly available antibodies for the histological classification of SGC.

{"title":"Role of Ancillary Techniques in the Differential Diagnosis of Salivary Gland Carcinomas","authors":"António Paiva-Correia,&nbsp;Henrik Hellquist,&nbsp;Joana Apolónio,&nbsp;Pedro Castelo-Branco","doi":"10.1111/apm.70008","DOIUrl":"https://doi.org/10.1111/apm.70008","url":null,"abstract":"<div>\u0000 \u0000 <p>Paiva-Correia A, Hellquist H, Apolónio J, Castelo-Branco P. Role of ancillary techniques in the differential diagnosis of salivary gland carcinomas. The diagnosis of salivary gland carcinomas (SGC) rests mainly on histology, but immunohistochemical and molecular investigations are often necessary for differential diagnosis. This review is primarily aimed as a tool for pathologists in non-specialised head and neck hospitals who encounter a limited number of SGC annually. The use of testing an initial antibody panel, which may comprise both positive and negative expression for a suspected entity, and examples of different panels are outlined. We also focused on acinic cell carcinoma (AcCC), which is positive for DOG1 and negative for mammaglobin, whilst secretory carcinoma (SC) is positive for mammaglobin and negative for DOG1. In addition, the exclusive expression of androgen and HER2 in salivary duct carcinoma (SDC) and its use for differential diagnosis are also addressed. This review also highlights the particularities of mucoepidermoid carcinoma (MEC) and its negativity for S100 and SOX10, which distinguishes it from some of its mimics. In laboratories with limited access to antibodies for SGC, we recommend inclusion of mammaglobin. The use of molecular techniques for the diagnosis of MEC (<i>MAML2</i>), SC (<i>ETV6</i>), adenoid cystic carcinoma (<i>MYB</i>), and AcCC (<i>NR4A3</i>) is discussed. We highlight the role of commonly available antibodies for the histological classification of SGC.</p>\u0000 </div>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-02-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143438811","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
How to Write a Pathology Research Paper—Basic Principles and Beyond—A Primer for Residents
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-02-19 DOI: 10.1111/apm.70007
Glen Kristiansen

Medical writing is an art but still it is usually not in the curriculum of medical students. With the beginning of scientific activity during residency, many perceive this gap increasingly, and stay behind their own expectations in their scientific productivity. Many universities offer courses to teach scientific writing and many books and article address this void, but in real life the main work to carve a readable paper out of a pile of unsorted data remains often in the hands of the scientific supervisors. This little paper tries to address this issue with a focus on typical pathology related subjects by outlining the structure of a paper and explaining typical dos and don'ts of crafting a publishable scientific paper as a pathology resident.

{"title":"How to Write a Pathology Research Paper—Basic Principles and Beyond—A Primer for Residents","authors":"Glen Kristiansen","doi":"10.1111/apm.70007","DOIUrl":"https://doi.org/10.1111/apm.70007","url":null,"abstract":"<p>Medical writing is an art but still it is usually not in the curriculum of medical students. With the beginning of scientific activity during residency, many perceive this gap increasingly, and stay behind their own expectations in their scientific productivity. Many universities offer courses to teach scientific writing and many books and article address this void, but in real life the main work to carve a readable paper out of a pile of unsorted data remains often in the hands of the scientific supervisors. This little paper tries to address this issue with a focus on typical pathology related subjects by outlining the structure of a paper and explaining typical dos and don'ts of crafting a publishable scientific paper as a pathology resident.</p>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-02-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/apm.70007","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143438810","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Prognostic Significance of PD-L1 Expression and Associated Tumor-Infiltrating Lymphocytes in Supraglottic Laryngeal Squamous Cell Carcinoma
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-02-17 DOI: 10.1111/apm.70005
Elvir Zvrko, Muhedin Kadic, Ljiljana Vuckovic

Laryngeal squamous cell carcinoma (LSCC) is characterized by diverse profiles of tumor-infiltrating lymphocytes (TILs). We aimed to investigate the potential prognostic role of TILs and programmed death-ligand 1 (PD-L1) in patients with supraglottic LSCC. The expression of PD-L1 and TILs was assessed using immunohistochemistry in 39 patients with primary supraglottic LSCC and correlated with clinicopathological characteristics and disease-free survival (DFS). Survival curves were measured using the Kaplan–Meier method, and differences in survival between the groups were estimated using the log-rank test. TIL density was significantly higher in PD-L1-positive (combined positive score: CPS ≥ 1) than in PD-L1-negative (CPS < 1) patients (p = 0.000). Lower PD-L1 expression was significantly associated with a locoregional recurrence (Fisher's exact test, p = 0.008). DFS was significantly longer in patients with CPS ≥ 1 than in those with CPS < 1 (Log-rank test, p = 0.004). Multivariate Cox regression analysis showed that a low CPS (p = 0.003) and positive nodal status (p = 0.012) were statistically significant and independent predictors of malignancy recurrence. PD-L1 represents a valuable marker for predicting recurrence and shorter survival after definitive therapy.

{"title":"The Prognostic Significance of PD-L1 Expression and Associated Tumor-Infiltrating Lymphocytes in Supraglottic Laryngeal Squamous Cell Carcinoma","authors":"Elvir Zvrko,&nbsp;Muhedin Kadic,&nbsp;Ljiljana Vuckovic","doi":"10.1111/apm.70005","DOIUrl":"https://doi.org/10.1111/apm.70005","url":null,"abstract":"<div>\u0000 \u0000 <p>Laryngeal squamous cell carcinoma (LSCC) is characterized by diverse profiles of tumor-infiltrating lymphocytes (TILs). We aimed to investigate the potential prognostic role of TILs and programmed death-ligand 1 (PD-L1) in patients with supraglottic LSCC. The expression of PD-L1 and TILs was assessed using immunohistochemistry in 39 patients with primary supraglottic LSCC and correlated with clinicopathological characteristics and disease-free survival (DFS). Survival curves were measured using the Kaplan–Meier method, and differences in survival between the groups were estimated using the log-rank test. TIL density was significantly higher in PD-L1-positive (combined positive score: CPS ≥ 1) than in PD-L1-negative (CPS &lt; 1) patients (<i>p</i> = 0.000). Lower PD-L1 expression was significantly associated with a locoregional recurrence (Fisher's exact test, <i>p</i> = 0.008). DFS was significantly longer in patients with CPS ≥ 1 than in those with CPS &lt; 1 (Log-rank test, <i>p</i> = 0.004). Multivariate Cox regression analysis showed that a low CPS (<i>p</i> = 0.003) and positive nodal status (<i>p</i> = 0.012) were statistically significant and independent predictors of malignancy recurrence. PD-L1 represents a valuable marker for predicting recurrence and shorter survival after definitive therapy.</p>\u0000 </div>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143424185","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Helicobacter pylori Infection in Colombia: Phylogeny, Resistome, and Virulome
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-02-11 DOI: 10.1111/apm.70003
Angela B. Muñoz, Johanna Stepanian, Juan S. Solano-Gutierrez, Filipa F. Vale, Alba A. Trespalacios-Rangel

Helicobacter pylori is a successful etiologic gastric agent that reaches a prevalence around 80% in Colombia. This bacterium is extremely diverse and has shown a phylogeographic pattern. The objective of this study was to perform an analysis of genomic epidemiology of H. pylori in Colombia. We enriched our set of 29 newly sequenced Colombian H. pylori genomes with additional data from public databases, reaching a total of 221 genomes in our dataset. Phylogenetic characterization was carried out using MLST and whole genome SNP analysis. We also performed a characterized the diversity of virulence factors and mutations associated with antimicrobial resistance. Phylogenetic analyzes showed two new Colombian H. pylori clades. Furthermore, many virulence genotype combinations were found, mutations associated with resistance were found for all the studied antibiotics, highlighting 14.4% of the genomes presented profiles associated with resistance to more than one family of antibiotics. Our analyzes described the genomics of Colombian H. pylori and verify the presence of a population group formed exclusively by Colombian isolates. We demonstrated the great diversity among the isolates and that the analysis by comparative genomics of H. pylori are valuable tools to assess the diversity, virulence, and resistance of H. pylori.

{"title":"Helicobacter pylori Infection in Colombia: Phylogeny, Resistome, and Virulome","authors":"Angela B. Muñoz,&nbsp;Johanna Stepanian,&nbsp;Juan S. Solano-Gutierrez,&nbsp;Filipa F. Vale,&nbsp;Alba A. Trespalacios-Rangel","doi":"10.1111/apm.70003","DOIUrl":"https://doi.org/10.1111/apm.70003","url":null,"abstract":"<p><i>Helicobacter pylori</i> is a successful etiologic gastric agent that reaches a prevalence around 80% in Colombia. This bacterium is extremely diverse and has shown a phylogeographic pattern. The objective of this study was to perform an analysis of genomic epidemiology of <i>H. pylori</i> in Colombia. We enriched our set of 29 newly sequenced Colombian <i>H. pylori</i> genomes with additional data from public databases, reaching a total of 221 genomes in our dataset. Phylogenetic characterization was carried out using MLST and whole genome SNP analysis. We also performed a characterized the diversity of virulence factors and mutations associated with antimicrobial resistance. Phylogenetic analyzes showed two new Colombian <i>H. pylori</i> clades. Furthermore, many virulence genotype combinations were found, mutations associated with resistance were found for all the studied antibiotics, highlighting 14.4% of the genomes presented profiles associated with resistance to more than one family of antibiotics. Our analyzes described the genomics of Colombian <i>H. pylori</i> and verify the presence of a population group formed exclusively by Colombian isolates. We demonstrated the great diversity among the isolates and that the analysis by comparative genomics of <i>H. pylori</i> are valuable tools to assess the diversity, virulence, and resistance of <i>H. pylori</i>.</p>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-02-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/apm.70003","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143380524","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The EUCAST Disk Diffusion Method for Antimicrobial Susceptibility Testing of Oral Anaerobes
IF 2.2 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-02-09 DOI: 10.1111/apm.70002
Anne Birkeholm Jensen, Ellen Frandsen Lau, Thomas Greve, Niels Nørskov-Lauritsen

There is a need for standardized methods for antimicrobial susceptibility testing (AST) of anaerobic bacteria involved in oral and extra-oral infections. We tested the recently published EUCAST disk diffusion method for rapidly growing anaerobes on selected oral anaerobes. AST of 20 strains of Prevotella spp., 11 strains of Porphyromonas gingivalis, and six Fusobacterium nucleatum complex strains was performed with amoxicillin and metronidazole disks using EUCAST guidelines. Plates were incubated anaerobically, and inhibition zones were evaluated after 20 h (EUCAST recommendations) and again after 44 h. The recommended agar supported the growth of all 38 strains. Twenty-hour incubation was sufficient for the assessment of inhibition zone diameters of Fusobacterium strains. Although approved for Prevotella, an extended study of Prevotella species showed inconsistent growth within the EUCAST time limit of 20 h for some strains. All P. gingivalis strains required 44 h of incubation for the evaluation of inhibition zones. The EUCAST disk diffusion method for AST of rapidly growing anaerobes is applicable to members of the Fusobacterium nucleatum complex. P. gingivalis and several oral strains of Prevotella needed 44 h of incubation to enable reading of diffusion diameter. Further studies are necessary to validate the prolonged incubation of slow-growing anaerobes.

{"title":"The EUCAST Disk Diffusion Method for Antimicrobial Susceptibility Testing of Oral Anaerobes","authors":"Anne Birkeholm Jensen,&nbsp;Ellen Frandsen Lau,&nbsp;Thomas Greve,&nbsp;Niels Nørskov-Lauritsen","doi":"10.1111/apm.70002","DOIUrl":"https://doi.org/10.1111/apm.70002","url":null,"abstract":"<p>There is a need for standardized methods for antimicrobial susceptibility testing (AST) of anaerobic bacteria involved in oral and extra-oral infections. We tested the recently published EUCAST disk diffusion method for rapidly growing anaerobes on selected oral anaerobes. AST of 20 strains of <i>Prevotella</i> spp., 11 strains of <i>Porphyromonas gingivalis, and</i> six <i>Fusobacterium nucleatum</i> complex strains was performed with amoxicillin and metronidazole disks using EUCAST guidelines. Plates were incubated anaerobically, and inhibition zones were evaluated after 20 h (EUCAST recommendations) and again after 44 h. The recommended agar supported the growth of all 38 strains. Twenty-hour incubation was sufficient for the assessment of inhibition zone diameters of <i>Fusobacterium</i> strains. Although approved for <i>Prevotella</i>, an extended study of <i>Prevotella</i> species showed inconsistent growth within the EUCAST time limit of 20 h for some strains. All <i>P. gingivalis</i> strains required 44 h of incubation for the evaluation of inhibition zones. The EUCAST disk diffusion method for AST of rapidly growing anaerobes is applicable to members of the <i>Fusobacterium nucleatum</i> complex. <i>P. gingivalis</i> and several oral strains of <i>Prevotella</i> needed 44 h of incubation to enable reading of diffusion diameter. Further studies are necessary to validate the prolonged incubation of slow-growing anaerobes.</p>","PeriodicalId":8167,"journal":{"name":"Apmis","volume":"133 2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2025-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/apm.70002","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143380163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Apmis
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1