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Aurora Kinase A: The Prominent Oncogenic Link in Helicobacter pylori-Driven Gastric Carcinogenesis 极光激酶A:幽门螺杆菌驱动胃癌发生的重要致癌因素。
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-10-10 DOI: 10.1111/apm.70077
Nidhi Varshney, Meenakshi Kandpal, Vaishali Saini, Siddharth Singh, Ajay Kumar Jain, Debi Chatterji, Erle S. Robertson, Hem Chandra Jha

Chronic Helicobacter pylori (H. pylori) infection leads to gastric carcinoma (GC), while aurora kinase A (AURKA) is known to be upregulated in several cancers. However, the direct association between AURKA and H. pylori remains largely unexplored. The significance of AURKA in H. pylori infection was investigated using an RNAi-mediated silencing method. The expression of downstream signaling genes and apoptotic markers was analyzed through qRT-PCR and western blot. Cancerous properties were evaluated through scratch wound assay, cell counting through trypan blue, and genomic instability assay. We used RNAi-mediated gene silencing to knock down AURKA expression and observed a reduction in the transcript levels of H. pylori pathogenic genes, signaling genes associated with H. pylori infection. We found that AURKA regulated STAT3 and c-Myc, which further enhanced the oncogenic potential of H. pylori. Moreover, AURKA knockdown led to the activation of apoptotic markers and alterations in mitochondrial biomass and membrane potential during H. pylori infection. Additionally, AURKA knockdown reduced cell proliferation, migration, and genomic instability in H. pylori-infected AGS cells. This study demonstrates that AURKA knockdown could abrogate H. pylori-induced expression of STAT3 and c-Myc in AGS, suggesting a functional signaling axis linking AURKA to H. pylori-mediated downstream effects.

慢性幽门螺杆菌(h.p ylori)感染导致胃癌(GC),而极光激酶A (AURKA)已知在几种癌症中上调。然而,AURKA和幽门螺杆菌之间的直接联系在很大程度上仍未被探索。采用rnai介导的沉默方法研究AURKA在幽门螺杆菌感染中的意义。通过qRT-PCR和western blot分析下游信号基因和凋亡标志物的表达情况。通过划伤试验、台盼蓝细胞计数和基因组不稳定性试验评估癌性。我们使用rnai介导的基因沉默来敲低AURKA的表达,并观察到幽门螺杆菌致病基因转录水平的降低,这是与幽门螺杆菌感染相关的信号基因。我们发现AURKA调控STAT3和c-Myc,进一步增强了幽门螺杆菌的致癌潜能。此外,AURKA敲低导致幽门螺杆菌感染期间凋亡标记物的激活和线粒体生物量和膜电位的改变。此外,AURKA敲除降低了幽门螺杆菌感染AGS细胞的细胞增殖、迁移和基因组不稳定性。本研究表明,AURKA敲低可以消除H. pylori诱导的AGS中STAT3和c-Myc的表达,这表明AURKA与H. pylori介导的下游效应之间存在功能性信号传导轴。
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引用次数: 0
Development of Metal Analogues of Prussian Blue@Silver Nanocomposites for the Treatment of Biofilm and Skin-Infections 普鲁士Blue@Silver纳米复合材料金属类似物治疗生物膜和皮肤感染的研究进展。
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-10-10 DOI: 10.1111/apm.70073
Sangeeta Kumari, Swapna Bhukya, Anjali Upadhyay, Swapnali Londhe, Saketh Nuthi, Chitta Ranjan Patra, Sudip Mukherjee

Silver-based nanocomplexes are promising antibacterial agents because of their ability to break the bacterial cell membrane, enhance oxidative stress, and damage bacterial DNA, offering potential alternatives to conventional antibiotics. Recently, Prussian blue analogues nanocomposites have gained attention due to their unique advantages, including biocompatibility, low cost, and easy structural modification to induce bioactivity. Herein, we developed different metal analogues of Prussian blue@silver [MIIPB@Ag, MII = Cu, Co, and Mn] nanocomposites for antibacterial applications. In vitro assays confirmed the utility of these materials in inhibiting Gram-negative and Gram-positive bacteria. The antibiofilm property of CuIIPB@Ag and MnIIPB@Ag was assessed by coating them on PDMS disk surfaces. The results show that CuPB@Ag (at 1600 μM) and MnPB@Ag (at 4000 μM) achieve approximately an 85% reduction in biofilm formation. In vitro cytotoxicity studies assessed by using the MTT assay support the biocompatibility of CuIIPB@Ag (up to 80% cell viability in 60 μM) and MnIIPB@Ag (up to 70% cell viability in 150 μM). Moreover, CuIIPB@Ag (at 1600 μM) and MnIIPB@Ag (at 4000 μM) eliminated in vivo skin infections in the preclinical rat model. These results highlight the potential of these metal analogues of Prussian blue@silver nanocomposites for the treatment of bacterial infections.

银基纳米复合物是很有前途的抗菌剂,因为它们能够破坏细菌细胞膜,增强氧化应激,破坏细菌DNA,为传统抗生素提供了潜在的替代品。近年来,普鲁士蓝类似物纳米复合材料因其具有生物相容性好、成本低、结构修饰容易诱导生物活性等独特优势而备受关注。在此,我们开发了普鲁士blue@silver [MIIPB@Ag, MII = Cu, Co,和Mn]纳米复合材料的不同金属类似物,用于抗菌应用。体外实验证实了这些物质在抑制革兰氏阴性和革兰氏阳性细菌中的效用。通过在PDMS圆盘表面涂覆CuIIPB@Ag和MnIIPB@Ag来评价其抗菌膜性能。结果表明,CuPB@Ag (1600 μM)和MnPB@Ag (4000 μM)可使生物膜的形成减少约85%。使用MTT法评估的体外细胞毒性研究支持CuIIPB@Ag (60 μM内高达80%的细胞活力)和MnIIPB@Ag (150 μM内高达70%的细胞活力)的生物相容性。此外,CuIIPB@Ag (1600 μM)和MnIIPB@Ag (4000 μM)消除了临床前大鼠模型的体内皮肤感染。这些结果突出了普鲁士blue@silver纳米复合材料的金属类似物在治疗细菌感染方面的潜力。
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引用次数: 0
Unraveling the Bifunctional HisIE Enzyme in Acinetobacter baumannii JJAB01: A Novel Therapeutic Target for Combating Antimicrobial Resistance 揭示鲍曼不动杆菌JJAB01的双功能HisIE酶:对抗抗菌素耐药性的新治疗靶点
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-10-08 DOI: 10.1111/apm.70070
Raji Rajmichael, Nagarajan Hemavathy, Sangavi Pandi, Saritha Poopandi, Umashankar Vetrivel, Jeyaraman Jeyakanthan

Antimicrobial resistance (AMR) in ESKAPE pathogens presents a critical global health challenge, particularly in hospitals. The enzyme HisIE from A. baumannii was explored as a therapeutic target using structure-based drug design to combat bacterial infections. This study integrates various computational approaches, including homology modeling, molecular dynamics simulations (MDS), and structure-based virtual screening to identify the potent inhibitors with high binding affinity and favorable pharmacokinetic properties. High-throughput virtual screening of the COCONUT database identified lead compounds featuring strong binding affinities to protein targets along with favorable pharmacokinetic profiles. CNP0007442, CNP0007145, and CNP0007506 emerged as the most potent candidates based on MM/GBSA binding free energy calculations. They exhibited stable interactions with key active site residues (His98) of AbHisIE, primarily through Van der Waals and electrostatic forces, enabling enhanced enzyme inhibition. Furthermore, density functional theory analysis revealed optimal HOMO–LUMO energy gaps, indicating the selected compounds' potential reactivity and stability. The findings highlight these candidates for further experimental validation, offering a novel therapeutic approach by disrupting the essential bacterial metabolic pathways. This study identifies promising drug-like molecules targeting AbHisIE, offering a novel strategy to combat AMR infections.

ESKAPE病原体的抗微生物药物耐药性(AMR)是一项重大的全球卫生挑战,特别是在医院。利用基于结构的药物设计,探索鲍曼不动杆菌HisIE酶作为治疗靶点来对抗细菌感染。本研究整合了多种计算方法,包括同源性建模、分子动力学模拟(MDS)和基于结构的虚拟筛选,以识别具有高结合亲和力和良好药代动力学性质的有效抑制剂。椰子数据库的高通量虚拟筛选鉴定出与蛋白质靶点具有强结合亲和力的先导化合物以及良好的药代动力学特征。基于MM/GBSA结合自由能计算,CNP0007442、CNP0007145和CNP0007506被认为是最有效的候选者。它们与AbHisIE的关键活性位点残基(His98)表现出稳定的相互作用,主要通过范德华力和静电力,从而增强了酶的抑制作用。此外,密度泛函理论分析显示了最优的HOMO-LUMO能隙,表明所选化合物具有潜在的反应性和稳定性。这些发现突出了这些候选的进一步实验验证,提供了一种新的治疗方法,通过破坏必要的细菌代谢途径。这项研究确定了有希望的靶向AbHisIE的药物样分子,为对抗AMR感染提供了一种新的策略。
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引用次数: 0
Combination of Isoliquiritigenin and Vancomycin Alleviates Staphylococcus aureus-Induced Bone Infection in Rats 异奎霉素与万古霉素联合应用可减轻金黄色葡萄球菌所致大鼠骨感染。
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-09-23 DOI: 10.1111/apm.70056
Mingbo Wang, Huicheng Lv, Long Han, Haisheng Jia, Lifeng Zhang, Lei Wang, Aimin He, Yu Du

Staphylococcus aureus (S. aureus)-induced osteomyelitis presents therapeutic challenges due to antibiotic resistance. Isoliquiritigenin (ISL), a licorice-derived chalcone, exhibits antibacterial and anti-inflammatory properties. This study evaluated vancomycin (VAN) combined with ISL against methicillin-resistant S. aureus (MRSA)-induced implant-related osteomyelitis. A rat model was established by tibial MRSA inoculation with simultaneous Kirschner wire implantation. Four weeks postinfection, rats were divided into five groups: normal, model, VAN (50 mg/kg), ISL (100 mg/kg), and VAN + ISL. After 14 days of treatment, combined therapy significantly reduced bone infection severity and histopathological scores versus monotherapies (p < 0.001), decreased serum inflammatory markers (IL-6, TNF-α, IL-1β, and CRP; p < 0.001), and reduced bacterial loads in bone/wire (p < 0.001). In vitro, ISL (50 μM) attenuated MRSA-induced inflammatory response in MC3T3-E1 osteoblasts by suppressing NF-κB and MAPK signaling, while promoting osteogenesis via increased Runx2/BMP2/ALP expression, activated BMP/Smad signaling, and enhanced mineralization. Overall, VAN + ISL combination therapy outperforms monotherapy by concurrently eradicating MRSA, suppressing inflammation, and promoting bone repair, representing a promising synergistic strategy for recalcitrant osteomyelitis.

金黄色葡萄球菌(金黄色葡萄球菌)诱导的骨髓炎提出了治疗挑战,由于抗生素耐药性。异甘草素(ISL)是一种从甘草中提取的查尔酮,具有抗菌和抗炎特性。本研究评估万古霉素(VAN)联合ISL治疗耐甲氧西林金黄色葡萄球菌(MRSA)诱导的种植体相关性骨髓炎。采用胫骨接种MRSA同时植入克氏针的方法建立大鼠模型。感染后4周,将大鼠分为正常组、模型组、VAN (50 mg/kg)组、ISL (100 mg/kg)组和VAN + ISL组。治疗14天后,与单一治疗相比,联合治疗显著降低了骨感染的严重程度和组织病理学评分(p
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引用次数: 0
Divergent Synthesis, Antibacterial and Antibiofilm Evaluation, and In Silico ADMET Analysis of Hydroxy Flavanones, Flavones, Aurones, and O-Propynyloxy Aurones 羟基黄酮、黄酮、金酮和o -丙基氧基金酮的合成、抗菌和抗生物膜评价以及硅ADMET分析。
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-09-18 DOI: 10.1111/apm.70069
Samyuktha Arimalai Dinakararaja, Loganathan Rangasamy, Nalini Easwaran, Ethiraj Kannatt Radhakrishnan

Bacterial biofilms cause chronic infections by resisting the effectiveness of existing antibiotics. Staphylococcus aureus is a readily biofilm-forming pathogen that may cause severe health issues through its survival in indwelling medical devices. Salmonella enterica causes prevalent food poisoning and affects millions of people globally. Our study focused on the antibacterial, antibiofilm activities, and pharmacokinetic properties of the chemically synthesized flavonoids. A simple and effective protocol for synthesizing flavanones, flavones, O-propynyloxy aurones, and hydroxy aurones from O-propynyloxy chalcones was established. All the flavonoids except a few showed good zones of inhibition against both the above-mentioned bacterial pathogens. Flavonoids showed more than 50% inhibition in all the tested antibiofilm activities. Confocal images gave clear visual evidence for the decrease in cell density of the biofilms after flavonoids treatment. Among the synthesized compounds, compound 9h exhibited the highest antibacterial activity against S. aureus, while compound 8g was most effective against S. enterica. In terms of antibiofilm activity, compound 8g showed the strongest inhibition against S. aureus, whereas compound 10a demonstrated the highest activity against S. enterica. Pharmacokinetic studies suggest that these flavonoids, with appropriate structural modifications, could serve as promising candidates for the development of orally administrable agents targeting bacterial pathogens.

细菌生物膜通过抵抗现有抗生素的有效性而引起慢性感染。金黄色葡萄球菌是一种容易形成生物膜的病原体,通过其在留置医疗器械中的生存可能导致严重的健康问题。肠道沙门氏菌引起普遍的食物中毒,影响全球数百万人。本文主要研究了化学合成的黄酮类化合物的抗菌、抗膜活性和药代动力学性质。建立了以邻丙基氧基查尔酮为原料合成黄酮、黄酮、邻丙基氧基金酮和羟基金酮的简单有效的工艺流程。除少数黄酮外,其余黄酮对上述病原菌均有较好的抑制作用。黄酮类化合物对抗菌膜活性均有50%以上的抑制作用。共聚焦图像为黄酮类化合物处理后生物膜细胞密度的降低提供了清晰的视觉证据。在所合成的化合物中,化合物9h对金黄色葡萄球菌的抑菌活性最高,而化合物8g对肠球菌的抑菌活性最高。在抗菌膜活性方面,化合物8g对金黄色葡萄球菌的抑制作用最强,而化合物10a对肠球菌的抑制作用最强。药代动力学研究表明,这些类黄酮经过适当的结构修饰,可以作为开发针对细菌病原体的口服给药药物的有希望的候选者。
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引用次数: 0
Characterization of a Novel Phage HZJ33 and Its Application in the Treatment of Carbapenem-Resistant Klebsiella pneumoniae Infection 新型噬菌体HZJ33的鉴定及其在耐碳青霉烯肺炎克雷伯菌感染中的应用
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-09-14 DOI: 10.1111/apm.70068
Ruici Lu, Ruilin Wang, Xuefang Ren, Xinwei Liu, Xiaojuan You, Chunxia Wang, Rui Zhu, Yongwei Li

Carbapenem-resistant Klebsiella pneumoniae (CRKP) represents a critical global public health challenge. Phages are regarded as promising alternatives to antibiotics. In this study, a novel lytic phage, HZJ33, was isolated from the clinical CRKP strain KP703. Transmission electron microscopy (TEM) revealed that HZJ33 possessed an icosahedral head and podovirus morphotype. HZJ33 achieved optimal infectivity at a multiplicity of infection (MOI) of 0.01, with a latent period of 10 min and a burst size of 4.65 × 104 PFU/cell. It lysed 40% of tested clinical CRKP isolates (12/30). The endotoxin level released from bacterial lysis mediated by phage HZJ33 was well below the established safety threshold and exhibited no detectable cytotoxicity. Whole-genome analysis confirmed the absence of virulence and antibiotic resistance genes. In vitro, HZJ33 suppressed KP703 growth curves within 10 h. In the Galleria mellonella infection model, HZJ33 treatment at an MOI of 100 increased the larval survival rate to 75%, compared to 25% in the infected negative control group (1 × 107 CFU/mL). These findings identify HZJ33 as a lytic phage with a broad host range, high stability, favorable safety, and strong antibacterial activity in vitro and in vivo, supporting its potential for CRKP therapy.

耐碳青霉烯肺炎克雷伯菌(CRKP)是一项重大的全球公共卫生挑战。噬菌体被认为是抗生素的有希望的替代品。本研究从临床CRKP菌株KP703中分离到一种新的裂解噬菌体HZJ33。透射电镜(TEM)显示HZJ33具有二十面体头部和足病毒形态。HZJ33在感染多重性(multiplicity of infection, MOI)为0.01时达到最佳感染能力,潜伏期为10 min,爆发量为4.65 × 104 PFU/细胞。它能裂解40%的临床CRKP分离株(12/30)。由噬菌体HZJ33介导的细菌裂解释放的内毒素水平远低于既定的安全阈值,且未表现出可检测到的细胞毒性。全基因组分析证实没有毒力和抗生素抗性基因。在体外,HZJ33在10 h内抑制KP703的生长曲线。在mellonella感染模型中,MOI为100的HZJ33处理使幼虫存活率提高到75%,而感染阴性对照组(1 × 107 CFU/mL)的存活率为25%。这些研究结果表明,HZJ33是一种宿主范围广、稳定性高、安全性好、体外和体内抗菌活性强的噬菌体,具有应用于CRKP治疗的潜力。
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引用次数: 0
Aspects of Genetic Diversity, Host Specificity and Public Health Significance of Single-Celled Intestinal Parasites Commonly Observed in Humans and Mostly Referred to as ‘Non-Pathogenic’ 常见于人类且通常被称为“非致病性”的单细胞肠道寄生虫的遗传多样性、宿主特异性及其公共卫生意义
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-09-09 DOI: 10.1111/apm.70036
Christen Rune Stensvold
<p>Clinical microbiology involves the detection and differentiation of primarily bacteria, viruses, parasites and fungi in patients with infections. Billions of people may be colonised by one or more species of common luminal intestinal parasitic protists (CLIPPs) that are often detected in clinical microbiology laboratories; still, our knowledge on these organisms' impact on global health is very limited. The genera <i>Blastocystis</i>, <i>Dientamoeba</i>, <i>Entamoeba</i>, <i>Endolimax</i> and <i>Iodamoeba</i> comprise CLIPPs species, the life cycles of which, as opposed to single-celled pathogenic intestinal parasites (e.g., microsporidia and sporozoa), do probably not include gut-invasive stages that could result in pathological processes and thereby disease (except for <i>Entamoeba histolytica</i>). All five genera are parasites in the sense that they use a host to complete their life cycle; still, by many specialists, these are considered to be of limited clinical relevance and could possibly be referred to as ‘eukaryotic endobionts’ or even ‘endosymbionts’, in case they would have health-protective effects. The articles included in this thesis exemplify the work and the data that support the view that it might be more relevant to study these genera in a public health and gut ecology context than in a clinical microbiology context. Essential to investigating the impact of intestinal parasites on health and disease are accurate diagnostic tools, including DNA-based technology such as PCR and sequencing, plus accurate reference databases. Small subunit (SSU) ribosomal RNA (rRNA) genes consistently present in both pro- and eukaryotic organisms are today avidly used as taxonomic markers. DNA-based methods have been developed for genetic characterisation of microorganisms and provided data on species/subtypes/genotypes, etc. Metagenomics and metabarcoding (the use of low-specific PCR coupled with next-generation sequencing) can provide information on co-infection/co-colonisation with other organisms and enable screening for genetic diversity, even in complex matrices. By developing and implementing sensitive and specific DNA-based diagnostic tools and typing assays primarily based on the SSU rRNA gene, we have increased insight into the diversity, distribution and significance of CLIPPs. With these tools, we have shown that the genera <i>Blastocystis</i> and <i>Dientamoeba</i> are far more common than previously thought. Only 10–15 years ago, hypotheses on their distribution typically relied on data generated by traditional parasitological diagnostic methods, such as light microscopy. Hence, we have shown that most older children in Nigeria host <i>Blastocystis</i>, and that most children in day-care institutions in Denmark, if not all, get colonised by <i>Dientamoeba</i> at some point. Single-celled non-pathogenic intestinal parasites can be hosted by patients with diarrhoea and functional or inflammatory bowel diseases. However, emerging data
临床微生物学主要是对感染患者体内的细菌、病毒、寄生虫和真菌进行检测和鉴别。数十亿人可能被一种或多种常见的肠道寄生原生生物(CLIPPs)定植,这些生物通常在临床微生物实验室中检测到;尽管如此,我们对这些生物对全球健康的影响的了解非常有限。Blastocystis、Dientamoeba、Entamoeba、Endolimax和Iodamoeba属包括CLIPPs物种,其生命周期与单细胞致病性肠道寄生虫(如微孢子虫和孢子虫)相反,可能不包括可能导致病理过程并因此导致疾病的肠道侵入阶段(溶组织内阿米巴除外)。这五个属都是寄生虫,因为它们依靠宿主来完成它们的生命周期;然而,许多专家认为,这些生物的临床意义有限,如果它们具有保护健康的作用,可能被称为“真核内生生物”或甚至“内生共生生物”。本论文中包含的文章举例说明了支持这一观点的工作和数据,即在公共卫生和肠道生态学背景下研究这些属可能比在临床微生物学背景下更相关。调查肠道寄生虫对健康和疾病的影响至关重要的是准确的诊断工具,包括PCR和测序等基于dna的技术,以及准确的参考数据库。小亚单位(SSU)核糖体RNA (rRNA)基因一致存在于原核生物和真核生物中,目前被广泛用作分类标记。基于dna的方法已被开发用于微生物的遗传特征,并提供了物种/亚型/基因型等数据。宏基因组学和元条形码(使用低特异性PCR与下一代测序相结合)可以提供与其他生物体共感染/共定植的信息,并能够筛选遗传多样性,即使在复杂的基质中也是如此。通过开发和实施敏感和特异性的基于dna的诊断工具和主要基于SSU rRNA基因的分型分析,我们对CLIPPs的多样性、分布和意义有了更深入的了解。有了这些工具,我们已经表明囊虫属和地阿米巴属比以前认为的要普遍得多。仅在10-15年前,关于它们分布的假设通常依赖于光显微镜等传统寄生虫学诊断方法产生的数据。因此,我们已经表明,尼日利亚的大多数大一点的儿童都有囊虫,丹麦日托机构的大多数儿童,如果不是全部,在某个时候都会被地entamoeba所感染。单细胞非致病性肠道寄生虫可由腹泻和功能性或炎症性肠病患者感染。然而,新出现的数据似乎表明,在肠道健康的个体中,CLIPPs通常比在有胃肠道症状的患者中更常见。我们对CLIPPs和肠道细菌之间的关系进行的研究表明,这些寄生虫的定植主要见于具有健康肠道菌群(益生菌)的个体。这一观察结果应该促使未来的研究项目关注CLIPPs作为生物标志物的使用,并且应该研究CLIPPs的操作在多大程度上可能导致肠道菌群的变化,从而被用作益生菌。即使通过CLIPPs说“感染”是有意义的,我们仍然缺乏区分定植和感染的工具。几十年来,我们已经知道,形态相似的寄生虫在临床影响方面可能不同,并且在遗传上不同,我们将这种特征称为“隐性遗传多样性”。一个例子是溶组织芽胞杆菌,它不能从囊肿的形态特征与异内阿米巴原虫区分开。然而,尽管溶组织芽胞杆菌可能是侵入性的,并引起阿米巴痢疾和阿米巴病,但大多数专家认为异芽胞杆菌是非侵入性的,通常是非致病性的。这一见解使我们研究了其他种类的内阿米巴原虫以及其他CLIPPs属的遗传多样性。如果我们能证明囊虫、地阿米巴、内多利莫巴和碘达米巴之间存在类似或更高程度的多样性,这些差异可能是解释寄生虫表型差异的关键,从而解释寄生虫引起症状的能力差异。尽管在一些clipp中发现了惊人的遗传多样性,但我们发现很少有证据支持这些理论;然而,还需要更多的研究。对于地entamoeba,我们已经观察到已知存在的两种基因型中的一种或多或少的克隆扩增,并且该基因型似乎具有全球优势。 相比之下,在囊虫亚型之间和内部观察到广泛的遗传多样性:迄今为止,已经确认了30多种所谓的亚型。我们和其他许多人都试图确定这些亚型中的一种或多种是否与肠道症状的发展有关,但几乎没有证据支持这一假设。我们知道1-4亚型反映了大约95%的囊虫在人类中的定植,并且我们已经表明具有人畜共患亚型(例如ST6、ST7和ST8)的个体可能通常会出现症状。我们已经揭示了其他CLIPPs中惊人的遗传变异,这导致了对Iodamoeba btschlii, Endolimax nana, Entamoeba coli和Entamoeba hartmanni作为物种复合体的认识,其中每个物种都应被视为具有重叠形态的物种复合体(称为“亚型”或“核糖体谱系”)。在溶组织芽胞杆菌和异丝芽胞杆菌在SSU rRNA基因上的多样性差异仅为1%-2%的地方,我们已经观察到大肠杆菌和大肠杆菌的核糖体谱系之间分别存在至少10%和30%的遗传差异,这对目前应用的物种概念提出了挑战。我们的研究结果已经在大肠杆菌和大肠杆菌中识别出三个核糖体谱系,以及在大肠杆菌和大肠杆菌中识别出两个核糖体谱系。此外,我们还发现了一个新的莫什科夫斯基内阿米巴谱系。从不同宿主物种(人类、非人灵长类动物、其他哺乳动物、鸟类等)收集的肠道寄生虫的分子特征可以帮助确定人类和非人宿主之间传播的机会。我们已经证明,猪可以携带一些物种/谱系,这些物种/谱系可以很容易地在人类中定居,例如哈特曼内阿米巴和I. b<s:1> tschlii。许多其他种类的大型哺乳动物是囊虫和内阿米巴原虫的常见宿主。然而,对于后两属,在非人类宿主中观察到的物种/遗传变异通常与在人类中观察到的物种/遗传变异不同,这可能表明许多CLIPPs物种在很长一段时间内已经适应了各自的宿主,从而导致相对较高的宿主特异性。对于囊虫,我们已经证明,即使一个给定的亚型可能在多个宿主物种中发现,也有可能在等位基因水平上证明隐宿主特异性。例如,尽管人类和非人类灵长类动物都可以被ST3定植,但宿主物种特有的ST3菌株在这两个宿主种群中传播。关于大肠杆菌,有可能ST1已经适应了人类宿主,而大肠杆菌ST2已经适应了更广泛的宿主范围,包括非人灵长类动物和啮齿动物。很明显,CLIPPs是人类背景人群的常见殖民者,尽管我们不能通过任何这些来反驳感染的存在,但在大多数情况下,认为临床和医疗干预是多余的应该是合理的。甚至可能是这样,当这些有机体刚建立时,人们应该尽量不要从肠道中消灭它们。然而,需要更多的研究来阐明在一些CLIPPs中观察到的显著遗传多样性在传播模式和临床意义方面的重要性。未来对CLIPPs的研究还应该包括能够阐明那些有利于CLIPPs定植的因素以及CLIPPs在宿主肠道生态、代谢和整体健康状况中的作用的研究。最后,由于人类和非人类宿主共享这些寄生属,并且一些原生动物可能对反刍动物的整体肠道功能有贡献,因此在驯养和野生动物中研究这些寄生虫,以了解更多关于这些寄生虫在健康和疾病中的作用,包括调查一些CLIPPs是否可能是内共生体,将是一件有趣的事情。
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引用次数: 0
Role of Toll-Like Receptors in Myeloid Neoplasms: Focuses on the Molecular Mechanisms and Clinical Impact on Myelodysplastic Syndromes, Acute Myeloid Leukemia, and Chronic Myeloid Leukemia toll样受体在髓系肿瘤中的作用:聚焦于骨髓增生异常综合征、急性髓系白血病和慢性髓系白血病的分子机制和临床影响
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-09-09 DOI: 10.1111/apm.70065
Clarissa Brenda Alves Cavalcante, Alessandro Cavalcante Chaves, Vanessa Silva de Oliveira, Maria Amanda Silva de Araújo, Thayres Marinho Cunha e Silva, João Vitor Caetano Goes, Roberta Taiane Germano de Oliveira, Ronald Feitosa Pinheiro, Howard Lopes Ribeiro-Junior

Toll-like receptors (TLRs) are essential components of the innate immune system, functioning as pattern recognition receptors (PRRs) to detect pathogen-associated molecular patterns (PAMPs) and damage-associated molecular patterns (DAMPs). In hematological malignancies, particularly myelodysplastic syndromes (MDS), acute myeloid leukemia (AML), and chronic myeloid leukemia (CML), TLRs influence inflammation, disease progression, and therapeutic response. This review highlights the prognostic relevance of TLR expression, the role of the MyD88 signaling pathway in clonal evolution, and the dual nature of TLR-mediated immune responses, either promoting antitumor activity or contributing to leukemogenesis. Notably, TLR dysregulation in MDS and AML is associated with poor prognosis and genomic instability, whereas in CML, TLRs contribute to a protective microenvironment via NOD-like and TNF-α pathways. Therapeutic strategies targeting TLRs, including agonists and antagonists, show promise in enhancing antitumor responses, especially when combined with agents like purine nucleoside phosphorylase inhibitors. Furthermore, genetic variations in TLR pathways may influence individual susceptibility to infection and cancer progression, reinforcing the relevance of personalized medicine. Overall, this review underscores the need for continued research into TLR modulation as a foundation for innovative therapies in hematologic cancers.

toll样受体(TLRs)是先天免疫系统的重要组成部分,作为模式识别受体(PRRs)检测病原体相关分子模式(PAMPs)和损伤相关分子模式(DAMPs)。在血液系统恶性肿瘤中,特别是骨髓增生异常综合征(MDS)、急性髓性白血病(AML)和慢性髓性白血病(CML), TLRs影响炎症、疾病进展和治疗反应。这篇综述强调了TLR表达的预后相关性,MyD88信号通路在克隆进化中的作用,以及TLR介导的免疫反应的双重性质,要么促进抗肿瘤活性,要么促进白血病发生。值得注意的是,在MDS和AML中,TLR失调与预后不良和基因组不稳定有关,而在CML中,TLR通过nod样通路和TNF-α通路促进保护性微环境。针对tlr的治疗策略,包括激动剂和拮抗剂,显示出增强抗肿瘤反应的希望,特别是当与嘌呤核苷磷酸化酶抑制剂等药物联合使用时。此外,TLR通路的遗传变异可能影响个体对感染和癌症进展的易感性,从而加强了个性化医疗的相关性。总之,这篇综述强调了继续研究TLR调节作为血液肿瘤创新疗法基础的必要性。
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引用次数: 0
Next Generation Sequencing Improves Diagnostic 16S rRNA Amplicon-Based Microbiota Analyses of Clinical Samples Compared to Sanger Sequencing 与Sanger测序相比,下一代测序改进了基于16S rRNA扩增子的临床样品微生物群分析
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-09-09 DOI: 10.1111/apm.70067
Huma Aftab, Christian H. Schouw, Rimtas Dargis, Laus K. Vejrum, Rikke L. Johansen, Josefine Tange Møller, Tina V. Madsen, Asta Lili Laugesen, Jens J. Christensen, Michael Kemp, Xiaohui C. Nielsen

Sequencing of the 16S ribosomal RNA (rRNA) gene is an important tool in addition to conventional methods for the identification of bacterial pathogens in human infections. In polymicrobial samples, Sanger sequencing can produce uninterpretable chromatograms. This limitation can be overcome by Next Generation Sequencing (NGS) of the 16S rRNA gene. We investigated the applicability of Oxford Nanopore Technologies (ONT) sequencing of the partial 16S rRNA gene as a diagnostic routine method for pathogen detection in clinical samples. From June 2021 to August 2022, 101 clinical samples positive in PCR for partial 16S rRNA gene analysis were subjected to both Sanger and ONT sequencing. Sanger sequences were edited and compared with deposited sequences in the NCBI database using BLAST, while ONT data were processed using EPI2ME Fastq 16S. The positivity rate (clinically relevant pathogen) was higher for ONT vs. Sanger sequencing: 72% and 59%, respectively. Concordance between Sanger and ONT sequencing was 80%. Furthermore, ONT detected more samples with polymicrobial presence compared to Sanger (13 vs. 5) sequencing. Interestingly, in one joint fluid sample, Borrelia bissettiiae was identified by ONT but not by Sanger. The results show that the detection of both monobacterial and multiple bacterial species is improved using ONT.

16S核糖体RNA (rRNA)基因测序是除常规方法外鉴定人类感染细菌病原体的重要工具。在多微生物样品中,桑格测序可能产生无法解释的色谱图。这一限制可以通过16S rRNA基因的下一代测序(NGS)来克服。我们研究了牛津纳米孔技术(ONT)对部分16S rRNA基因的测序作为临床样品中病原体检测的常规诊断方法的适用性。从2021年6月到2022年8月,101份16S rRNA部分基因PCR阳性的临床样本进行了Sanger和ONT测序。使用BLAST编辑Sanger序列并与NCBI数据库中的沉积序列进行比较,使用EPI2ME Fastq 16S处理ONT数据。ONT测序的阳性率(临床相关病原体)高于Sanger测序:分别为72%和59%。Sanger测序与ONT测序的一致性为80%。此外,与Sanger测序相比,ONT检测到更多具有多微生物存在的样品(13比5)。有趣的是,在一个关节液样本中,ONT检测到双性疏螺旋体,但Sanger检测不到。结果表明,ONT对单株细菌和多株细菌的检测效果均有提高。
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引用次数: 0
Kefir Grains in Self-Assembled Nanofibrils: Structural Role and Nutritional Applications 自组装纳米原纤维中的开菲尔颗粒:结构作用和营养应用
IF 2.6 4区 医学 Q4 IMMUNOLOGY Pub Date : 2025-09-08 DOI: 10.1111/apm.70064
Praveetha Senthilkumar, Siva Nandhini Suresh, Mohammad Ahmad Wadaan, Charumathi Pushparaj, Ramesh Subramani, Arunadevi Natarajan

Kefir grains offer numerous health benefits, including boosting the immune system, alleviating digestive issues, and enhancing antimicrobial activity. They are rich in beneficial probiotic bacteria that promote gut health and support a balanced intestinal microbiota. “Beta-lactoglobulin (β-lg), a well-known milk protein,” is used to create nanofibril structures that can serve as scaffolds. In this study, nanofibrils loaded with kefir were prepared using the self-assembly method and were incorporated during the initial stages of cheese preparation to modulate the structural properties. To confirm the integration of kefir grains and β-lactoglobulin (β-lg) nanofibrils, nutritional analysis, color analysis, in vitro release with PBS buffer, pH, and Acidity were analyzed. FT-IR spectroscopy and loading efficiency results (82%) confirm the incorporation of kefir grains into the nanofibrils, enhancing the bioavailability and health benefits. From the results, it is evident that higher loading efficiency occurs at lower concentrations (2%) of kefir grains, while at higher concentrations (3%), the kefir grains tend to form aggregates due to the bundling effect. Additionally, β-lg nanofibrils served as an effective scaffold material, supporting a novel strategy for developing functional dairy products with added gut health benefits.

开菲尔谷物提供许多健康益处,包括增强免疫系统,缓解消化问题,增强抗菌活性。它们富含有益的益生菌,能促进肠道健康,维持肠道菌群平衡。“β-乳球蛋白(β-lg),一种著名的牛奶蛋白,”被用来制造纳米纤维结构,可以作为支架。在本研究中,利用自组装方法制备了负载开菲尔的纳米原纤维,并在奶酪制备的初始阶段加入纳米原纤维以调节其结构特性。为了证实开菲尔颗粒与β-乳球蛋白(β-lg)纳米原纤维的整合,进行了营养分析、颜色分析、PBS缓冲液体外释放、pH和酸度分析。FT-IR光谱和负载效率结果(82%)证实了将开菲尔颗粒掺入纳米原纤维,提高了生物利用度和健康效益。结果表明,较低浓度(2%)的克非尔颗粒加载效率较高,而较高浓度(3%)的克非尔颗粒由于捆绑效应倾向于形成聚集体。此外,β-lg纳米原纤维作为一种有效的支架材料,支持开发具有肠道健康益处的功能性乳制品的新策略。
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