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Web-based data collection: detailed methods of a questionnaire and data gathering tool. 基于网络的数据收集:详细的问卷调查方法和数据收集工具。
Pub Date : 2006-01-04 DOI: 10.1186/1742-5573-3-1
Charles J Cooper, Sharon P Cooper, Deborah J del Junco, Eva M Shipp, Ryan Whitworth, Sara R Cooper

There have been dramatic advances in the development of web-based data collection instruments. This paper outlines a systematic web-based approach to facilitate this process through locally developed code and to describe the results of using this process after two years of data collection. We provide a detailed example of a web-based method that we developed for a study in Starr County, Texas, assessing high school students' work and health status. This web-based application includes data instrument design, data entry and management, and data tables needed to store the results that attempt to maximize the advantages of this data collection method. The software also efficiently produces a coding manual, web-based statistical summary and crosstab reports, as well as input templates for use by statistical packages.Overall, web-based data entry using a dynamic approach proved to be a very efficient and effective data collection system. This data collection method expedited data processing and analysis and eliminated the need for cumbersome and expensive transfer and tracking of forms, data entry, and verification. The code has been made available for non-profit use only to the public health research community as a free download..

在开发基于网络的数据收集工具方面取得了巨大进展。本文概述了一种系统的基于网络的方法,通过本地开发的代码来促进这一过程,并描述了经过两年的数据收集后使用这一过程的结果。我们提供了一个基于网络的方法的详细示例,该方法是我们为德克萨斯州斯塔尔县的一项研究开发的,用于评估高中生的工作和健康状况。这个基于web的应用程序包括数据仪器设计、数据输入和管理以及存储结果所需的数据表,这些数据表试图最大限度地发挥这种数据收集方法的优势。该软件还有效地生成编码手册、基于网络的统计摘要和交叉表报告,以及供统计软件包使用的输入模板。总的来说,采用动态方法的基于网络的数据输入被证明是一种非常高效和有效的数据收集系统。这种数据收集方法加快了数据处理和分析,并消除了对表格、数据输入和验证的繁琐和昂贵的传输和跟踪的需要。该代码仅供公共卫生研究界免费下载,供非营利性使用。
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引用次数: 15
Choosing an appropriate bacterial typing technique for epidemiologic studies. 为流行病学研究选择合适的细菌分型技术。
Pub Date : 2005-11-25 DOI: 10.1186/1742-5573-2-10
Betsy Foxman, Lixin Zhang, James S Koopman, Shannon D Manning, Carl F Marrs

A wide variety of bacterial typing systems are currently in use that vary greatly with respect to the effort required, cost, reliability and ability to discriminate between bacterial strains. No one technique is optimal for all forms of investigation. We discuss the desired level of discrimination and need for a biologic basis for grouping strains of apparently different types when using bacterial typing techniques for different epidemiologic applications: 1) confirming epidemiologic linkage in outbreak investigations, 2) generating hypotheses about epidemiologic relationships between bacterial strains in the absence of epidemiologic information, and 3) describing the distributions of bacterial types and identifying determinants of those distributions. Inferences made from molecular epidemiologic studies of bacteria depend upon both the typing technique selected and the study design used; thus, choice of typing technique is pivotal for increasing our understanding of the pathogenesis and transmission, and eventual disease prevention.

目前使用的各种各样的细菌分型系统在所需的努力、成本、可靠性和区分细菌菌株的能力方面差异很大。没有一种技术对所有形式的调查都是最佳的。我们讨论了在不同的流行病学应用中使用细菌分型技术时,对明显不同类型的菌株进行分组所需的区分水平和生物学基础的需要:1)在疫情调查中确认流行病学联系;2)在缺乏流行病学信息的情况下对菌株之间的流行病学关系提出假设;3)描述细菌类型的分布并确定这些分布的决定因素。从细菌分子流行病学研究中得出的推论取决于所选择的分型技术和所使用的研究设计;因此,分型技术的选择对于提高我们对发病机制和传播以及最终的疾病预防的理解至关重要。
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引用次数: 108
An easy approach to the Robins-Breslow-Greenland variance estimator. 罗宾斯-布瑞斯勒-格陵兰方差估计的简便方法
Pub Date : 2005-09-26 DOI: 10.1186/1742-5573-2-9
Paul Silcocks

The Mantel-Haenszel estimate for the odds ratio (and its logarithm) in stratified case control studies lacked a generally acceptable variance estimate for many years. The Robins-Breslow-Greenland estimate has met this need, but standard textbooks still do not provide an explanation of how it is derived. This article provides an accessible derivation which demonstrates the link between the Robins-Breslow-Greenland estimate and the familiar Woolf estimate for the variance of the log odds ratio, and which could easily be included in Masters level courses in epidemiology. The relationships to the unconditional and conditional maximum likelihood estimates are also reviewed.

多年来,分层病例对照研究中几率比例(及其对数)的曼特尔-海恩泽尔估计值一直缺乏一个普遍接受的方差估计值。罗宾斯-布雷斯洛-格陵兰估计值满足了这一需求,但标准教科书仍未解释其推导过程。本文提供了一个易于理解的推导过程,展示了罗宾斯-布雷斯罗-格陵兰估计值与我们熟悉的对数几率方差的伍尔夫估计值之间的联系,很容易将其纳入流行病学的硕士课程中。此外,还回顾了无条件最大似然估计和有条件最大似然估计之间的关系。
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引用次数: 0
Causal thinking and causal language in epidemiology: it's in the details. 流行病学中的因果思维和因果语言:在细节中。
Pub Date : 2005-07-29 DOI: 10.1186/1742-5573-2-8
Robert Lipton, Terje Ødegaard

Although epidemiology is necessarily involved with elucidating causal processes, we argue that there is little practical need, having described an epidemiological result, to then explicitly label it as causal (or not). Doing so is a convention which obscures the valuable core work of epidemiology as an important constituent of public health practice. We discuss another approach which emphasizes the public health "use value" of research findings in regard to prediction and intervention independent from explicit metaphysical causal claims. Examples are drawn from smoking and lung cancer, with particular focus on the original 1964 Surgeon General's report on smoking and the new version released in 2004. The intent is to help the epidemiologist focus on the pertinent implications of research, which, from a public health point of view, in large part entails the ability to predict and to intervene. Further discussion will center on the importance of differentiating between technical/practical uses of causal language, as might be used in structural equations or marginal structural modeling, and more foundational notions of cause. We show that statistical/epidemiological results, such as "smoking two packs a day increases risk of lung cancer by 10 times" are in themselves a kind of causal argument that are not in need of additional support from relatively ambiguous language such as "smoking causes lung cancer." We will show that the confusion stemming from the use of this latter statement is more than mere semantics. Our goal is to allow researchers to feel more confident in the power of their research to tell a convincing story without resorting to metaphysical/unsupportable notions of cause.

尽管流行病学必然涉及阐明因果过程,但我们认为,在描述了流行病学结果之后,几乎没有实际需要将其明确标记为因果(或非因果)。这样做是一种惯例,它模糊了流行病学作为公共卫生实践重要组成部分的宝贵核心工作。我们讨论了另一种方法,强调在预测和干预方面独立于明确的形而上学因果主张的研究结果的公共卫生“使用价值”。以吸烟和肺癌为例,特别关注1964年卫生局局长关于吸烟的原始报告和2004年发布的新版本。其目的是帮助流行病学家关注研究的相关含义,从公共卫生的角度来看,这在很大程度上需要预测和干预的能力。进一步的讨论将集中于区分因果语言的技术/实际用途的重要性,如可能用于结构方程或边际结构建模,以及更基本的原因概念。我们表明,统计/流行病学结果,如“每天吸两包烟会使肺癌的风险增加10倍”,本身就是一种因果论证,不需要诸如“吸烟导致肺癌”等相对模糊的语言的额外支持。我们将表明,使用后一种说法所引起的混淆不仅仅是语义学上的。我们的目标是让研究人员对他们的研究力量更有信心,在不诉诸形而上学/不受支持的原因概念的情况下,讲述一个令人信服的故事。
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引用次数: 46
Reporting incidence from a surveillance system with an operational case definition of unknown predictive value positive. 从监测系统中报告病例发生率,其操作病例定义为预测值未知的阳性。
Pub Date : 2005-07-20 DOI: 10.1186/1742-5573-2-7
Scott R Kegler

When reporting incidence rate estimates for relatively rare health conditions, associated case counts are often assumed to follow a Poisson distribution. Case counts obtained from large-scale electronic surveillance systems are often inflated by the presence of false positives, however, and adjusted case counts based on the results of a validation sample will have variances which are hyper-Poisson. This paper presents a simple method for constructing interval estimates for incidence rates based on case counts that are adjusted downward using an estimate of the predictive value positive of the surveillance case definition.

在报告相对罕见的健康状况的发病率估计数时,通常假定相关的病例数遵循泊松分布。然而,从大规模电子监控系统中获得的病例数往往会因为假阳性的存在而被夸大,根据验证样本结果调整后的病例数将具有超泊松方差。本文介绍了一种简单的方法,可根据病例数构建发病率的区间估计值,而病例数是利用监测病例定义的预测值正值估计值向下调整的。
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引用次数: 0
Teaching: the role of active manipulation of three-dimensional scatter plots in understanding the concept of confounding. 教学:积极操作三维散点图对理解混杂概念的作用。
Pub Date : 2005-06-14 DOI: 10.1186/1742-5573-2-6
Cora M C Busstra, Rob Hartog, Pieter van 't Veer

In teaching epidemiology, confounding is a difficult topic. The authors designed active learning objects (LO) based on manipulable three-dimensional (3D) plots to facilitate understanding of confounding. The 3D LOs help illustrate of how confounding can occur, how it generates bias and how to adjust for it. For the development of the LOs, guidelines were formulated based on epidemiology and theories of instructional design. These included integrating the conceptual and empirical aspects: the causal relationships believed to be operating in the study population (conceptual aspect) and data-oriented associations (empirical aspect). Other guidelines based on theories of instructional design included: actively engage the students, use visual methods when possible, and motivate the students about the importance of the topic. Students gave the method strong positive evaluations. Experts in epidemiology agreed that the 3D LOs apply generally accepted scientific views on confounding. Based on their experiences, the authors think that the 3D plots can be useful addition in the teaching of confounding. The article includes links and a downloadable file that provide a demonstration of the 3D LO-based teaching materials.

在流行病学教学中,混杂是一个难点。作者设计了基于可操作三维(3D)图的主动学习对象(LO),以促进对混杂的理解。三维LO有助于说明混杂是如何发生的、如何产生偏倚以及如何进行调整。为开发学习任务,我们根据流行病学和教学设计理论制定了指导方针。其中包括整合概念和经验两个方面:认为在研究人群中存在的因果关系(概念方面)和以数据为导向的关联(经验方面)。基于教学设计理论的其他指导原则包括:让学生积极参与,尽可能使用可视化方法,以及激励学生认识到该主题的重要性。学生们对这一方法给予了高度评价。流行病学专家一致认为,三维 LO 应用了公认的科学混杂观点。根据他们的经验,作者认为三维图可以作为混杂教学的有益补充。文章中的链接和可下载文件提供了基于三维LO的教材演示。
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引用次数: 0
Introducing article-processing charges and inviting "detailed methods sections" articles. 引入物品处理费并邀请“详细方法章节”的文章。
Pub Date : 2005-06-07 DOI: 10.1186/1742-5573-2-5
Carl V Phillips

This editorial introduces the use of article-processing charges at Epidemiologic Perspectives & Innovations and reviews that advantages of publishing in an Open Access journal. In addition, it introduces a new type of article the journal hopes to publish, detailed reports of study design or data analysis methods that have been used in health science research. The new type of article is intended to supplement the woefully constrained methods sections in standard research report articles, providing information that better fulfills the goals of scientific publishing.

这篇社论介绍了《流行病学观点与创新》文章处理收费的使用,并回顾了在开放获取期刊上发表文章的优势。此外,它还介绍了该杂志希望发表的一种新型文章,详细的研究设计报告或已用于健康科学研究的数据分析方法。新类型的文章旨在补充标准研究报告文章中严重受限的方法部分,提供更好地实现科学出版目标的信息。
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引用次数: 2
Historical perspective: the social determinants of disease--some blossoms. 历史视角:疾病的社会决定因素——一些花朵。
Pub Date : 2005-06-02 DOI: 10.1186/1742-5573-2-4
Michael Marmot
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引用次数: 20
Historical perspective: S. Leonard Syme's influence on the development of social epidemiology and where we go from there. 历史视角:s·伦纳德·赛姆对社会流行病学发展的影响以及我们的发展方向。
Pub Date : 2005-05-25 DOI: 10.1186/1742-5573-2-3
Irene H Yen

This article accompanies Len Syme's "Historical Perspective: The social determinants of disease--some roots of the movement." It describes some of Len's role in the development of social epidemiology through mentoring investigators and influencing training programs. It also discusses some challenges for the field and ways to move forward.

这篇文章伴随着Len Syme的《历史视角:疾病的社会决定因素——运动的一些根源》。它描述了Len通过指导调查人员和影响培训计划在社会流行病学发展中的一些作用。它还讨论了该领域面临的一些挑战和前进的途径。
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引用次数: 2
Historical Perspective: The social determinants of disease - some roots of the movement. 历史视角:疾病的社会决定因素--这一运动的一些根源。
Pub Date : 2005-04-19 DOI: 10.1186/1742-5573-2-2
S Leonard Syme

This is an account of the early days of research on social determinants as I experienced them. I describe my time as one of four Fellows in a new training program in Medical Sociology at Yale University and how I came to be the first Sociologist employed in the U.S. Public Health Service. I then became the first Executive Secretary of a new Study Section at NIH dealing with a small number of research grant proposals in the field of Epidemiology. My account deals with some of my experiences in this developing field, culminating with my appointment as the first Sociologist to become a Professor of Epidemiology in a School of Public Health.

这是我早期从事社会决定因素研究的经历。我描述了我作为耶鲁大学医学社会学新培训项目四名研究员之一的经历,以及我如何成为美国公共卫生服务部门聘用的第一位社会学家。随后,我成为了美国国立卫生研究院一个新成立的研究部门的首任执行秘书,负责处理流行病学领域的少量研究基金提案。我的报告讲述了我在这一发展中领域的一些经历,最后我被任命为公共卫生学院流行病学教授,成为第一位社会学家。
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引用次数: 0
期刊
Epidemiologic perspectives & innovations : EP+I
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