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Engineering challenges of BioNEMS: the integration of microfluidics, micro- and nanodevices, models and external control for systems biology. BioNEMS的工程挑战:集成微流体,微和纳米器件,模型和系统生物学的外部控制。
Pub Date : 2006-08-01 DOI: 10.1049/ip-nbt:20050045
J P Wikswo, A Prokop, F Baudenbacher, D Cliffel, B Csukas, M Velkovsky

Systems biology, i.e. quantitative, postgenomic, postproteomic, dynamic, multiscale physiology, addresses in an integrative, quantitative manner the shockwave of genetic and proteomic information using computer models that may eventually have 10(6) dynamic variables with non-linear interactions. Historically, single biological measurements are made over minutes, suggesting the challenge of specifying 10(6) model parameters. Except for fluorescence and micro-electrode recordings, most cellular measurements have inadequate bandwidth to discern the time course of critical intracellular biochemical events. Micro-array expression profiles of thousands of genes cannot determine quantitative dynamic cellular signalling and metabolic variables. Major gaps must be bridged between the computational vision and experimental reality. The analysis of cellular signalling dynamics and control requires, first, micro- and nano-instruments that measure simultaneously multiple extracellular and intracellular variables with sufficient bandwidth; secondly, the ability to open existing internal control and signalling loops; thirdly, external BioMEMS micro-actuators that provide high bandwidth feedback and externally addressable intracellular nano-actuators; and, fourthly, real-time, closed-loop, single-cell control algorithms. The unravelling of the nested and coupled nature of cellular control loops requires simultaneous recording of multiple single-cell signatures. Externally controlled nano-actuators, needed to effect changes in the biochemical, mechanical and electrical environment both outside and inside the cell, will provide a major impetus for nanoscience.

系统生物学,即定量、后基因组、后蛋白质组学、动态、多尺度生理学,利用计算机模型以综合、定量的方式处理遗传和蛋白质组学信息的冲击波,这些信息最终可能具有10(6)个具有非线性相互作用的动态变量。从历史上看,单一的生物测量是在几分钟内完成的,这表明了指定10(6)个模型参数的挑战。除了荧光和微电极记录外,大多数细胞测量都没有足够的带宽来识别关键细胞内生化事件的时间过程。数千个基因的微阵列表达谱不能确定定量动态细胞信号传导和代谢变量。计算视觉和实验现实之间的主要差距必须弥合。细胞信号动力学和控制的分析需要,首先,微和纳米仪器,同时测量多个细胞外和细胞内变量有足够的带宽;第二,打开现有内部控制和信号回路的能力;第三,提供高带宽反馈的外部BioMEMS微致动器和外部可寻址的细胞内纳米致动器;第四,实时、闭环、单细胞控制算法。解开细胞控制回路的嵌套和耦合特性需要同时记录多个单细胞特征。外部控制的纳米致动器,需要影响细胞内外的生化、机械和电气环境的变化,将为纳米科学提供一个主要的推动力。
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引用次数: 55
Freestanding polyelectrolyte multilayers as functional and construction elements. 独立的聚电解质多层作为功能和结构元素。
Pub Date : 2006-08-01 DOI: 10.1049/ip-nbt:20050017
M Nolte, A Fery

This article reviews the progress in the field of polyelectrolyte multilayer membranes with special attention to freestanding membranes. These can be prepared both in the form of hollow capsules and as flat membrane sheets. While (bio) functionality, or bioactivity as it is known, from solid supported multilayers is maintained, additional applications arise for the freestanding membranes in the fields of encapsulation, separation and micromechanics. The production processes and functionalities achieved for capsules and flat sheets. The integration of membranes into larger scale structures is essential for their use and an overview of existing strategies is given. In particular, the way in which arrays of micro-compartments can be built up is shown, and their potential for sensing and combinatorial chemistry discussed. Recent results on the applications of such systems as membrane sensors in the case of flat membrane sheets are also discussed.

本文综述了聚电解质多层膜的研究进展,重点介绍了独立膜的研究进展。它们既可以制成空心胶囊,也可以制成扁平膜片。虽然固体支撑多层膜的(生物)功能或生物活性得以维持,但在封装、分离和微力学领域,独立式膜的应用也有所增加。胶囊和平板的生产工艺和功能。将膜整合到更大规模的结构中对于它们的使用是必不可少的,并概述了现有的策略。特别地,展示了微室阵列的构建方式,并讨论了它们在传感和组合化学方面的潜力。本文还讨论了薄膜传感器等系统在平面薄膜上的最新应用结果。
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引用次数: 22
Electrophoretic analysis of gold nanoparticles: size-dependent electrophoretic mobility of nanoparticles. 金纳米颗粒的电泳分析:纳米颗粒的大小依赖的电泳迁移率。
Pub Date : 2006-06-01 DOI: 10.1049/ip-nbt:20050043
W Bücking, T Nann

Efforts were made to realise a two-dimensional, on-line-coupled isotachophoresis-capillary zone electrophoresis system. The electrophoretic behaviour of gold nanoparticles was investigated with the idea that they could be used to improve the control of this electrophoretic set-up. The well-known citrate-ligated gold nanoparticles were not suitable for this application, because the ligand was desorbed, and the nanoparticle solutions were degraded. Therefore mercaptocarboxylic acids were used, because the chemisorption of thiols on the gold surface was improved. Isotachophoretic measurements were carried out with these nanoparticles. A size-dependent electrophoretic mobility was found according to theoretical predictions, and the surface and zeta-potential were discussed for the small particle range. A new method for concentration measurements of nanoparticles is presented by means of isotachophoresis.

建立了一种二维、在线耦合的等速电泳-毛细管区带电泳系统。研究了金纳米颗粒的电泳行为,认为它们可以用来改善对电泳设置的控制。众所周知的柠檬酸盐连接金纳米颗粒不适合这种应用,因为配体被解吸,纳米颗粒溶液被降解。因此采用巯基羧酸,改善了硫醇在金表面的化学吸附。用这些纳米粒子进行等速电泳测量。根据理论预测,发现了与尺寸相关的电泳迁移率,并讨论了小颗粒范围内的表面和ζ电位。提出了一种用等速电泳法测定纳米颗粒浓度的新方法。
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引用次数: 36
Spectral tuning of localised surface plasmon-polariton resonance in metallic nano-crescents. 金属纳米新月形中局部表面等离子体-极化子共振的光谱调谐。
Pub Date : 2006-06-01 DOI: 10.1049/ip-nbt:20050016
J Kim, G L Liu, Y Lu, L P Lee

The utilisation of plasmonic effects in metallic nanostructures is gaining importance for applications in molecular sensing. Of special interest is the local field enhancement effect, which enables surface-enhanced Raman scattering and significantly boosts the sensitivity of the Raman technique. For in vivo biological research, the ability to excite the resonance of localised surface plasmon-polaritons within the biological window is often desired. A new nanostructure called the nano-crescent is introduced and exhibits strong plasmonic activities within the biological window using a novel intra-particle plasmonic coupling scheme.

在金属纳米结构中利用等离子体效应对分子传感的应用越来越重要。特别令人感兴趣的是局部场增强效应,它可以实现表面增强拉曼散射,并显着提高拉曼技术的灵敏度。对于体内生物学研究,在生物窗口内激发局部表面等离子体极化子共振的能力通常是需要的。介绍了一种新的纳米结构,称为纳米新月形,并通过一种新的粒子内等离子体耦合方案在生物窗口内显示出强等离子体活性。
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引用次数: 11
Fluorogenic nanocrystals for highly sensitive detection of C-reactive protein. 荧光纳米晶体用于c反应蛋白的高灵敏度检测。
Pub Date : 2006-06-01 DOI: 10.1049/ip-nbt:20050048
K-K Sin, C P-Y Chan, W-M Leung, M Seydack, R Renneberg

A solid-phase sandwich fluorescence immunoassay using nanocrystals of a fluorogenic precursor, fluorescein diacetate (FDA), conjugated with monoclonal antibodies for the detection of C-reactive protein (CRP), is described. FDA nanocrystals were coated with distearoylglycerophosphoethanolamine (DSPE), modified with amino(poly(ethylene glycol))(PEG(2000)-Amine) as an interface for coupling biomolecules. CRP was chosen as a model analyte because of its widely accepted role as a marker for acute inflammation and prospective heart failure. A low limit of detection (1.10 microg l(-1)) and high precision (CV = 2.72-9.48%) were achieved. Following the immunoreaction, the monoclonal anti-CRP conjugated nanocrystals were released by hydrolysis and dissolution instigated by the addition of a large volume of organic solvent-sodium hydroxide mixture. Using human serum samples from 66 patients with high heart attack risk and 19 healthy blood donors, this CRP fluorescence immunoassay showed a good correlation to the commercially available, turbidimetric immunoassay for CRP. This result was corroborated by the Bland-Altman plot that showed a mean difference between the two methods of only 0.36+/-1.46 mg l(-1). The study demonstrates that the organic fluorogenic FDA nanocrystals can be applied for the detection of CRP, which is a clinically interesting plasma protein with a low limit of detection.

本文描述了一种固相夹心荧光免疫分析方法,该方法使用荧光前体双醋酸荧光素(FDA)纳米晶体与单克隆抗体偶联,用于检测c反应蛋白(CRP)。FDA纳米晶体包被二硬脂酰甘油磷酸乙醇胺(DSPE),用氨基(聚乙二醇)修饰(PEG(2000)-胺)作为偶联生物分子的界面。之所以选择CRP作为模型分析物,是因为它被广泛认为是急性炎症和潜在心力衰竭的标志物。检测限低(1.10 μ g l(-1)),精密度高(CV = 2.72 ~ 9.48%)。免疫反应结束后,加入大量有机溶剂-氢氧化钠混合物,通过水解和溶解释放单克隆抗crp共轭纳米晶体。使用66例心脏病发作高风险患者和19例健康供血者的血清样本,该CRP荧光免疫分析法与市售的CRP浊度免疫分析法显示出良好的相关性。Bland-Altman图证实了这一结果,显示两种方法的平均差异仅为0.36+/-1.46 mg l(-1)。本研究表明,有机荧光性FDA纳米晶体可用于CRP的检测,CRP是一种临床感兴趣的低检出限血浆蛋白。
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引用次数: 8
Sensors made of RNA: tailored ribozymes for detection of small organic molecules, metals, nucleic acids and proteins. 由RNA制成的传感器:用于检测小有机分子、金属、核酸和蛋白质的定制核糖酶。
Pub Date : 2006-04-01 DOI: 10.1049/ip-nbt:20050047
S Müller, D Strohbach, J Wolf

Nucleic acids are well suited to serve as biosensors for the fast and reliable detection of small organic molecules, such as a number of metabolites or antibiotics, specific nucleic acid sequences, peptides, proteins or metal ions. One of the main advantages of using nucleic acids as biosensors is that they can be modulated to respond allosterically to specific effectors. Thus molecular recognition is transformed directly into a catalytic process with observable results. In particular, catalytic RNA structures, such as the hammerhead and hairpin ribozymes, have been used for biosensor engineering. The review reports on the function mode of nucleic acid biosensors and introduces recent developments and applications in the field.

核酸非常适合作为生物传感器,用于快速可靠地检测小有机分子,如许多代谢物或抗生素,特定核酸序列,肽,蛋白质或金属离子。使用核酸作为生物传感器的主要优点之一是它们可以被调节以对特定效应物做出变构反应。因此,分子识别被直接转化为具有可观察结果的催化过程。特别是催化RNA结构,如锤头核酶和发夹核酶,已被用于生物传感器工程。本文综述了核酸生物传感器的功能模式,并介绍了该领域的最新进展和应用。
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引用次数: 16
Controlled delivery of membrane proteins to artificial lipid bilayers by nystatin-ergosterol modulated vesicle fusion. 通过制氨抑素-麦角甾醇调节的囊泡融合控制膜蛋白向人工脂质双分子层的传递。
Pub Date : 2006-04-01 DOI: 10.1049/ip-nbt:20050039
M R R de Planque, M R R de Planque, G P Mendes, M Zagnoni, M E Sandison, K H Fisher, R M Berry, A Watts, H Morgan

The study of ion channels and other membrane proteins and their potential use as biosensors and drug screening targets require their reconstitution in an artificial membrane. These applications would greatly benefit from microfabricated devices in which stable artificial lipid bilayers can be rapidly and reliably formed. However, the amount of protein delivered to the bilayer must be carefully controlled. A vesicle fusion technique is investigated where composite ion channels of the polyene antibiotic nystatin and the sterol ergosterol are employed to render protein-carrying vesicles fusogenic. After fusion with an ergosterol-free artificial bilayer, the nystatin-ergosterol channels do not dissociate immediately and thus cause a transient current signal that marks the vesicle fusion event. Experimental pitfalls of this method were identified, the influence of the nystatin and ergosterol concentration on the fusion rate and the shape of the fusion event marker was explored, and the number of different lipid species was reduced. Under these conditions, the -amyloid peptide could be delivered in a controlled manner to a standard planar bilayer. Additionally, electrical recordings were obtained of vesicles fusing with a planar lipid bilayer in a microfabricated device, demonstrating the suitability of nystatin-ergosterol modulated vesicle fusion for protein delivery within microsystems.

离子通道和其他膜蛋白的研究及其作为生物传感器和药物筛选靶点的潜在用途需要在人工膜中对其进行重构。这些应用将极大地受益于微制造装置,其中稳定的人工脂双分子层可以快速可靠地形成。然而,传递到双分子层的蛋白质量必须仔细控制。研究了一种囊泡融合技术,利用多烯抗生素制霉菌素和甾醇麦角甾醇的复合离子通道使携带蛋白质的囊泡融合。在与不含麦角甾醇的人工双分子层融合后,制氨抑素-麦角甾醇通道不会立即解离,从而产生瞬时电流信号,标志着囊泡融合事件。识别了该方法的实验缺陷,探讨了制霉菌素和麦角甾醇浓度对融合率和融合事件标记物形状的影响,减少了不同脂质种类的数量。在这些条件下,-淀粉样肽可以以可控的方式传递到标准的平面双分子层。此外,在微制造装置中获得了囊泡与平面脂质双分子层融合的电记录,证明了制氨抑素麦角甾醇调节的囊泡融合在微系统内蛋白质递送的适用性。
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引用次数: 29
Nanofunctionalisation for the treatment of peripheral nervous system injuries. 纳米功能化治疗周围神经系统损伤。
Pub Date : 2006-04-01 DOI: 10.1049/ip-nbt:20050030
L Pastorino, Federico Caneva Soumetz, C Ruggiero

A construct based on the electrostatic layer-by-layer self assembly technique has been fabricated, to be used as a tailored device to encourage nerve regeneration. A multilayered nanocoating composed of three precursor bilayers of cationic poly(dimethyldiallylammonium) chloride (PDDA) and anionic poly(styrenesulfonate) (PSS), followed by bilayers of poly-D-lysine (PDL) and antibody specific to transforming growth factor 1 (anti-TGF-1), has been deposited on HYAFF 11. The assembly process has been monitored by quartz crystal microbalance (QCM) for its characterisation and then it has been used on HYAFF 11. Structural studies of the resulting multilayers confirmed stepwise deposition of anti-TGF-1, with an average layer thickness of 2.2+/-0.2 nm and an average surface density of 0.36+/-0.03 mug cm(-2). Scanning electron microscopy has been used to characterise multilayer uniformity. Finally, the immunological activity of the multilayered structure has been assessed. The results show that anti-TGF-1 can be included in its active form in a predetermined multilayered structure onto HYAFF 11 with quantitative control of layer thickness and weight, providing a high tool with great potential in tissue engineering.

一种基于静电逐层自组装技术的结构已经被制造出来,作为一种定制的装置来促进神经再生。在HYAFF - 11表面沉积了一层由阳离子聚二甲基二烯丙基氯化铵(PDDA)和阴离子聚苯乙烯磺酸盐(PSS)三层前驱体、聚d -赖氨酸(PDL)和转化生长因子1特异性抗体(抗tgf -1)组成的多层纳米涂层。利用石英晶体微天平(QCM)对其进行了表征,并在HYAFF 11上进行了应用。多层膜的结构研究证实了抗tgf -1的逐步沉积,平均层厚度为2.2+/-0.2 nm,平均表面密度为0.36+/-0.03 μ g cm(-2)。扫描电子显微镜已用于表征多层均匀性。最后,对多层结构的免疫活性进行了评价。结果表明,抗tgf -1可以以预定的多层结构的活性形式被包含在HYAFF 11上,并可定量控制层厚和重量,为组织工程提供了一种具有巨大潜力的高工具。
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引用次数: 13
Stability similarities between shells, cells and nano carbon tubes. 壳、细胞和纳米碳管之间的稳定性相似性。
Pub Date : 2006-02-01 DOI: 10.1049/ip-nbt:20050021
Y Yin, H-Y Yeh, J Yin

The similarity in stability characteristics between multiscale circular cylindrical structures is revealed. Two detailed structures are explored. One is the circular cylindrical shell on an engineering scale, and another is the circular cylindrical lipid bilayer vesicle on a micro- or nanoscale. The critical stability of the vesicle acted on by uniformly distributed radial pressure is analysed. The critical load of the vesicle is derived and compared with that of the thin shell. The astonishing similarity between them is disclosed. The possible applications of such similarity to biophysics, biology and biomedicine are presented.

揭示了多尺度圆柱结构稳定特性的相似性。探讨了两个详细的结构。一种是工程尺度上的圆柱状外壳,另一种是微纳米尺度上的圆柱状脂质双分子层囊泡。分析了均匀径向压力作用下囊泡的临界稳定性。推导了囊泡的临界载荷,并与薄壳的临界载荷进行了比较。揭示了他们之间惊人的相似之处。介绍了这种相似性在生物物理学、生物学和生物医学方面的可能应用。
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引用次数: 0
Nanofluidic channels fabrication and manipulation of DNA molecules. 纳米流体通道的制造和DNA分子的操作。
Pub Date : 2006-02-01 DOI: 10.1049/ip-nbt:20050044
K Wang, S Yue, L Wang, A Jin, C Gu, P Wang, H Wang, X Xu, Y Wang, H Niu

Nanofluidic channel arrays, which have a width of about 40 nm, depth of 60 nm and length of 50 mum, were created using a focused-ion-beam milling instrument on a silicon nitride film swiftly and exactly, as is necessary. Stained -DNA molecules were put inside these sub-100 nm conduits by capillary force and they were stretched and transferred along these conduits, which were dealt with activating reagent Brij aqueous solution in advance. The movements of DNA molecules in these channels were discussed. These nano-structure channels may be useful in the study and analysis of the statics as well as the dynamics of single biomolecules.

纳米流体通道阵列的宽度约为40纳米,深度为60纳米,长度为50微米,使用聚焦离子束铣削仪器在氮化硅薄膜上快速准确地制造出来。用毛细管力将染色后的dna分子放入100nm以下的管道中,沿管道拉伸和转移,并预先用活化剂Brij水溶液处理。讨论了DNA分子在这些通道中的运动。这些纳米结构通道可用于研究和分析单个生物分子的静力学和动力学。
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引用次数: 17
期刊
IEE proceedings. Nanobiotechnology
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