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Modelling current transport through DNA (deoxyribonucleic acid) molecules using equivalent circuits. 利用等效电路模拟电流通过DNA(脱氧核糖核酸)分子的传输。
Pub Date : 2004-12-01 DOI: 10.1049/ip-nbt:20045007
H L Kwok
The current transport properties of DNA molecules are of considerable interest. The key reason for this appears to be linked to the universality of DNA molecules in living organisms, their self-assembly properties, and potential applications as nanoscale devices. The modelling of the I-V characteristics of a DNA molecule using equivalent circuits is reported. The advantages of the proposed model are that non-linear current behaviour can be included together with potential piece-wise solutions. The model includes the use of transistors to mimic current discontinuities at transition points. The simulated results closely resemble measured I-V curves and do not invoke resonant tunneling which contradicts observed temperature dependences. An equivalent-circuit model which includes the use of active devices is shown to be effective way to mimic non-linear current transport in biological molecules.
目前DNA分子的传输特性引起了相当大的兴趣。其关键原因似乎与生物体中DNA分子的普遍性、它们的自组装特性以及作为纳米级器件的潜在应用有关。本文报道了利用等效电路对DNA分子的I-V特性进行建模。所提出的模型的优点是非线性电流行为可以与潜在的分段解决方案一起包含。该模型包括使用晶体管来模拟过渡点的电流不连续。模拟结果与测量的I-V曲线非常相似,并且没有引起共振隧道效应,这与观测到的温度依赖性相矛盾。等效电路模型是模拟生物分子中非线性电流传输的有效方法。
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引用次数: 5
Principles of a nanoscale DNA scanner. 纳米级DNA扫描仪的原理。
Pub Date : 2004-10-01 DOI: 10.1049/ip-nbt:20041098
E Y Chan

A nanofluidic device for the routine stretching of single DNA molecules was hypothesised and tested. The device consists of an entrance channel leading to a post-field preceding an elongational flow field. The device facilitates each molecule's coil-to-stretch transition, counteracts its entropic recoil, and presents a stream of moving stretched molecules for detailed single-molecule time-of-flight measurements. The physics of DNA stretching was explored in a device where there was a juxtaposition of hexagonal upright post arrays with lithographically defined elongational flow fields.

假设并测试了一种用于单个DNA分子常规拉伸的纳米流体装置。该装置包括通向延伸流场之前的后场的入口通道。该装置促进了每个分子的线圈到拉伸的转变,抵消了它的熵后坐力,并呈现了一个移动的拉伸分子流,用于详细的单分子飞行时间测量。DNA拉伸的物理学是在一个装置中探索的,在这个装置中,六边形直立柱阵列与平版印刷定义的拉长流场并置。
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引用次数: 1
Ambipolar transistors based on azurin proteins. 基于蓝蛋白的双极性晶体管。
Pub Date : 2004-10-01 DOI: 10.1049/ip-nbt:20041032
S D'Amico, G Maruccio, P Visconti, E D'Amone, A Bramanti, R Cingolani, R Rinaldi

A new type of transistor is presented. It is realised by using a metalloprotein; namely, azurin. Thanks to their natural functional characteristics, which involve inter- and intramolecular electron transfer, metalloproteins are good candidates for biomolecular nanoelectronics. The implementation of a prototype of protein transistor operating in air and in the solid state based on self-organised films of azurins is reported. Experimental current-voltage characteristics are shown. The new device presents an ambipolar behaviour as the gate bias voltage is changed. Exploiting this peculiar characteristic, a fully integrated logic gate which can be a good starting point for a new class of nanoelectronics devices has been realised.

提出了一种新型晶体管。它是通过使用金属蛋白实现的;也就是说,azurin。由于金属蛋白具有分子间和分子内电子转移的天然功能特性,因此金属蛋白是生物分子纳米电子学研究的良好候选者。本文报道了一种基于azurins自组织薄膜在空气和固态中工作的蛋白质晶体管原型的实现。给出了实验电流-电压特性。当栅极偏置电压改变时,新器件呈现双极性行为。利用这种特殊的特性,一个完全集成的逻辑门可以成为一个新的纳米电子器件的良好起点。
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引用次数: 9
Preparation and purification of synthetic protein nanoparticulates. 合成蛋白质纳米颗粒的制备与纯化。
Pub Date : 2004-10-01 DOI: 10.1049/ip-nbt:20041085
M Jahanshahi, S Williams, A Lyddiatt, S A Shojaosadati

The protein nanostructure used in this study (bovine serum albumin; BSA nanoparticles) were fabricated with an average nanoparticle diameter 150 nm based on the principle of coacervation. Practical recovery of nanoparticulate mimics, of products such as plasmid DNA and viruses as putative gene therapy vectors from model systems, has been studied. The adsorbents employed in this study for the recovery of nanoparticles had one of four discrete designs i.e. microporous (pore size <0.2 microm), macroporous (pore size >0.8 microm), solid phase (nonporous) and pellicular (pore size <0.5 microm). Soluble protein was included in the study to represent cellular components of complex feedstocks and the separation of assemblies from components, while particulate protein served as surrogate size and charge mimics of less easily sourced viral and plasmid gene therapy vectors. Candidate adsorbents were physically characterised to assess their suitability for fluidised-bed operation, biochemically characterised exploiting batch-binding experimentation and laser scanning confocal microscopy. The adsorptive capacity of nanoparticulate products was strongly influenced by the physical design of the adsorbents, and microporous adsorbents appeared to be less suited for the recovery of nanoparticulate products. The generic application of such adsorbents for the recovery of nanoparticulate bioproducts is discussed.

本研究中使用的蛋白质纳米结构(牛血清白蛋白;基于凝聚原理制备了平均粒径为150 nm的BSA纳米颗粒。实际回收纳米颗粒模拟物,产品如质粒DNA和病毒作为假定的基因治疗载体从模型系统,已经研究。本研究中用于回收纳米颗粒的吸附剂有四种不同的设计,即微孔(孔径0.8微米)、固相(无孔)和膜状(孔径)
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引用次数: 28
From micro to nano: properties and potential applications of micro- and nano-filled polymer ceramic composites in microsystem technology. 从微到纳米:微纳米填充聚合物陶瓷复合材料在微系统技术中的性能和潜在应用。
Pub Date : 2004-08-01 DOI: 10.1049/ip-nbt:20040518
T Hanemann, J Boehm, P Henzi, K Honnef, K Litfin, E Ritzhaupt-Kleissl, J Hausselt

In microsystem technology, four important material classes are established either for the generation or the replication of microstructured surfaces: silicon, polymers, metals and ceramics. Composite materials consisting of a polymer matrix and ceramic fillers show improved thermomechanical properties in comparison to polymers and can be introduced as a new additional material class. The substitution of micro-sized ceramic fillers by nano-sized ceramics in composites has a strong influence on the composite's physical properties: the reduction of ceramic particle size down to the nanometre scale results in an improved sinter activity owing to the large surface area. The fabrication of dense ceramics is simplified and can be used for a rapid prototyping of microstructured ceramic parts. The addition of nano-sized ceramics with particle sizes of <40 nm to polymers allows the manufacturing of transparent polymer based composites with modified refractive indices for use in polymer waveguides. The influence of the ceramic particle size, the ceramic content and different dispersion methods on the composite's physical properties are discussed.

在微系统技术中,为生成或复制微结构表面建立了四种重要的材料类别:硅、聚合物、金属和陶瓷。与聚合物相比,由聚合物基体和陶瓷填料组成的复合材料表现出更好的热机械性能,可以作为一种新的附加材料类别引入。在复合材料中,纳米陶瓷取代微尺寸的陶瓷填料对复合材料的物理性能有很大的影响:陶瓷颗粒尺寸减小到纳米尺度,由于表面积大,烧结活性得到改善。该方法简化了致密陶瓷的制作,可用于微结构陶瓷零件的快速成型。纳米陶瓷的加入,粒径为
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引用次数: 23
First steps of an interdisciplinary approach towards miniaturised cryopreservation for cellular nanobiotechnology. 细胞纳米生物技术小型化低温保存的跨学科方法的第一步。
Pub Date : 2004-08-01 DOI: 10.1049/ip-nbt:20040908
H Zimmermann, A D Katsen, F R Ihmig, C H P Durst, S G Shirley, G R Fuhr

The only widely used and accepted method for long-term cell preservation is storage below -130 degrees C. The biosciences will make increasing use of preservation and place new demands on it. Currently, cells are frozen in volumes greater than 1 ml but the new cell and implantation therapies (particularly those using stem cells) will require accurately defined freezing and storage conditions for each single cell. Broadly-based, routine freezing of biological samples allows the advantage of retrospective analysis and the possibility of saving genetic rights. For such applications, one billion is a modest estimation for the number of samples. Current cryotechniques cannot handle so many samples in an efficient and economic way, and the need for new cryotechnology is evident. The interdisciplinary approach presented here should lead to a new sample storage and operating strategy that fulfils the needs mentioned above. Fundamental principles of this new kind of smart sample storage are: (i) miniaturisation; (ii) modularisation; (iii) informationsample integration, i.e. freezing memory chips with samples; and (iv) physical and logical access to samples and information without thawing the samples. In contrast to current sample systems, the prototyped family of intelligent cryosubstrates allows the recovery of single wells (parts) of the substrate without thawing the rest of the sample. The development of intelligent cryosubstrates is linked to developments in high throughput freezing, high packing density storage and minimisation of cytotoxic protective agents.

长期保存细胞的唯一被广泛使用和接受的方法是保存在零下130摄氏度以下。生物科学将越来越多地使用保存并对其提出新的要求。目前,细胞的冷冻体积大于1ml,但新的细胞和植入疗法(特别是那些使用干细胞的疗法)将需要精确定义每个单个细胞的冷冻和储存条件。对生物样本进行广泛的常规冷冻,可以进行回顾性分析,并有可能挽救遗传权利。对于这样的应用,10亿是对样本数量的适度估计。目前的冷冻技术无法以高效和经济的方式处理如此多的样品,因此对新的冷冻技术的需求是显而易见的。这里提出的跨学科方法应该导致一个新的样本存储和操作策略,满足上述需求。这种新型智能样品存储的基本原则是:(1)小型化;(2)模块化;(iii)信息样本整合,即用样本冻结存储芯片;(iv)在不解冻样品的情况下对样品和信息进行物理和逻辑访问。与目前的样品系统相比,智能低温底物的原型家族允许回收底物的单孔(部分),而不解冻其余样品。智能低温底物的发展与高通量冷冻,高包装密度储存和细胞毒性保护剂最小化的发展有关。
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引用次数: 20
Plasma printing: patterned surface functionalisation and coating at atmospheric pressure. 等离子印刷:在大气压下进行图案表面功能化和涂层。
Pub Date : 2004-08-01 DOI: 10.1049/ip-nbt:20040836
C Penache, C Gessner, T Betker, V Bartels, A Hollaender, C-P Klages

A new plasma-based micropatterning technique, here referred to as plasma printing, combines the well known advantages given by the nonequilibrium character of a dielectric barrier discharge (DBD) and its operation inside small gas volumes with dimension between tens and hundreds of micrometres. The discharge is run at atmospheric pressure and can be easily implemented for patterned surface treatment with applications in biotechnology and microtechnology. In this work the local modification of dielectric substrates, e.g. polymeric films, is addressed with respect to coating and chemical functionalisation, immobilisation of biomolecules and area-selective electroless plating.

一种新的基于等离子体的微图案技术,这里被称为等离子体印刷,结合了众所周知的介电阻挡放电(DBD)的非平衡特性及其在尺寸在几十到几百微米之间的小气体体积内工作的优点。排放在常压下运行,可以很容易地实现与生物技术和微技术应用的图案表面处理。在这项工作中,介质衬底的局部改性,例如聚合物薄膜,涉及涂层和化学功能化,生物分子的固定化和区域选择性化学镀。
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引用次数: 28
Microthermoforming as a novel technique for manufacturing scaffolds in tissue engineering (CellChips). 微热成型是组织工程(CellChips)中制造支架的一种新技术。
Pub Date : 2004-08-01 DOI: 10.1049/ip-nbt:20040824
S Giselbrecht, T Gietzelt, E Gottwald, A E Guber, C Trautmann, R Truckenmüller, K F Weibezahn

The CellChip is a microstructured polymer scaffold, which favours a three-dimensional cultivation of cells within an array of cubic microcontainers. The manufacturing process used so far is microinjection moulding combined with laser-based perforation. In a first attempt to simplify the process, costly perforation was avoided by using commercially available, inexpensive microfiltration membranes for the bottom of the microcavities. Microthermoforming is a promising novel technique which allows the CellChip to be produced from thin film. Working pressures of approximately 4000 kPa were required for the adequate moulding of 50 microm thick films from three different polymers (polystyrene, polycarbonate, cyclo-olefin polymer). Integrating drafts and chamfers in micromoulds is not going to eliminate an uneven thickness profile, but reduces demoulding forces. Microthermoformed CellChips of polycarbonate were perforated by an ion track technique to guarantee a sufficient supply of medium and gases to the cells. The prestructured CellChips were irradiated with 1460 MeV xenon ions at a fluence of a few 10(6) ions/cm2. The tracks were etched in an aqueous solution of 5 N NaOH at 30 degrees C, which resulted in cylindrical pores approximately 2 microm in diameter. Microinjection-moulded, membrane-bonded and thermoformed CellChips were subjected to comparative examination for viability in a cell culture experiment with parenchymal liver cells (HepG2). The cells stayed viable over a period of more than 20 days. No significant differences in viability between injection-moulded, membrane-bonded, and thermoformed CellChips were observed.

细胞芯片是一种微结构聚合物支架,它有利于在立方微容器阵列中进行细胞的三维培养。目前使用的制造工艺是微注射成型与激光穿孔相结合。在简化工艺的第一次尝试中,通过在微腔底部使用市售的廉价微滤膜,避免了昂贵的穿孔。微热成型是一种很有前途的新技术,它可以从薄膜中生产出细胞芯片。用三种不同的聚合物(聚苯乙烯、聚碳酸酯、环烯烃聚合物)制成50微米厚的薄膜,需要大约4000千帕的工作压力。在微模中集成草稿和倒角并不能消除不均匀的厚度轮廓,但可以减少脱模力。微热成型聚碳酸酯细胞芯片采用离子径迹技术穿孔,以保证细胞有足够的介质和气体供应。用1460 MeV的氙离子以10(6)个离子/cm2照射预结构细胞芯片。径迹在5 N NaOH水溶液中蚀刻,温度为30℃,形成直径约为2微米的圆柱形孔。在实质肝细胞(HepG2)的细胞培养实验中,对微注射成型、膜结合和热成型的细胞芯片的活力进行了比较检查。这些细胞在20多天的时间里保持了活力。注射成型、膜结合和热成型细胞芯片之间的活力没有显著差异。
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引用次数: 37
Microthermoforming of flexible, not-buried hollow microstructures for chip-based life sciences applications. 基于芯片的生命科学应用的柔性,非埋空微结构的微热成型。
Pub Date : 2004-08-01 DOI: 10.1049/ip-nbt:20040823
R Truckenmüller, S Giselbrecht

A new method is presented for the manufacturing of flexible, not buried and thin-walled hollow microstructures from polymer films. This low-cost method seems to be especially suited for the fabrication of plastic microstructures for fluidic one-way applications in the field of life sciences. It is based on a thermoforming process adapted to microstructure technology and is called 'microthermoforming'. Inside a hot embossing press, a heated thin thermoplastic film is formed into the evacuated microcavities of a plate-shaped metal mould using a compressed gas. The film may be heat-sealed on to a thicker plastic film substrate inside the same press without demoulding the thermoformed film. To demonstrate the performance of the new manufacturing method, flexible capillary electrophoresis and cell culture chips from polystyrene, polycarbonate and a cyclo-olefin polymer with 16 and 625 parallel microstructures each, respectively, have been fabricated.

提出了一种利用聚合物薄膜制造柔性、非埋置、薄壁中空微结构的新方法。这种低成本的方法似乎特别适合于制造生命科学领域中用于流体单向应用的塑料微结构。它基于适应微观结构技术的热成型工艺,被称为“微热成型”。在热压压力机内部,使用压缩气体将加热的薄热塑性薄膜形成到板形金属模具的真空微腔中。所述薄膜可以在同一压力机内热封到较厚的塑料薄膜基材上,而不脱模所述热成型薄膜。为了证明这种新制造方法的性能,用聚苯乙烯、聚碳酸酯和环烯烃聚合物分别制备了16个和625个平行微结构的柔性毛细管电泳和细胞培养芯片。
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引用次数: 25
Transporting cells with mobile microrobots. 用移动微型机器人运送细胞。
Pub Date : 2004-08-01 DOI: 10.1049/ip-nbt:20040839
T Trüper, A Kortschack, M Jahnisch, H Hülsen, S Fatikow

Current research activities on the development of a system for transport and manipulation of biological cells with microrobots are described. If single cells in liquid are to be placed on a grid or sorted by cell type, having a system that can automatically lift, transport and release cells can significantly speed up such a tedious task. Therefore, a system is being developed that can automatically sort different cells by transporting them to different repositories. A method to recognise different types of cells is also being developed. The system consists of several components; a motorised inverted microscope, several different microrobots and a software architecture to control the whole cell manipulation workstation and to provide a user interface.

目前的研究活动的发展系统的运输和操作的生物细胞与微型机器人描述。如果要将液体中的单个细胞放在网格上或按细胞类型分类,那么拥有一个可以自动提起、运输和释放细胞的系统可以大大加快这项繁琐的任务。因此,正在开发一种系统,该系统可以通过将不同的单元传输到不同的存储库来自动对不同的单元进行分类。一种识别不同类型细胞的方法也正在开发中。该系统由几个部分组成;一个电动倒置显微镜,几个不同的微型机器人和一个软件架构来控制整个细胞操作工作站并提供用户界面。
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引用次数: 17
期刊
IEE proceedings. Nanobiotechnology
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