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Adaptive experimentation and optimization in organic chemistry. 有机化学的自适应实验与优化。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-11-03 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.180
Artur M Schweidtmann, Philippe Schwaller
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引用次数: 0
Conformational effects on iodide binding: a comparative study of flexible and rigid carbazole macrocyclic analogs. 对碘离子结合的构象影响:柔性和刚性咔唑大环类似物的比较研究。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-11-03 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.181
Guang-Wei Zhang, Yong Zhang, Le Shi, Chuang Gao, Hong-Yu Li, Lei Xue

To our knowledge, this work represents one of the earliest comparative studies on the anion-binding behaviors of carbazole-based structural analogs, demonstrating that a flexible macrocycle markedly improves iodide binding affinity via an induced-fit mechanism. The flexible analog PBG exhibits a 22.78-fold higher fluorescence quenching efficiency upon iodide binding compared to the rigid WDG (K PBG /K WDG = 22.78), demonstrating its potential as a highly sensitive optical probe and offering a novel strategy for engineering dynamic supramolecular receptors. Two carbazole-based macrocyclic probes, PBG (flexible benzene ring) and WDG (rigid fluorene backbone), were synthesized via Friedel-Crafts reactions. Their iodide (I-) recognition properties were systematically explored using 1H NMR, UV-vis absorption, and fluorescence spectroscopy. Quantitative analysis via the Benesi-Hildebrand equation and nonlinear fitting demonstrated that flexible PBG achieves superior I- binding (K PBG = 1.387 × 105 M-1) through induced-fit conformational adjustments, whereas rigid WDG (K WDG = 6.089 × 103 M-1) is constrained by preorganized cavity geometry, adhering to a conformational selection mechanism. This work elucidates the synergistic interplay between conformational dynamics and localized structural adaptations governing anion recognition. The findings advance the rational design of tunable, high-affinity anion receptors and deepen the understanding of conformational regulation in supramolecular systems.

据我们所知,这项工作代表了对卡巴唑类结构类似物阴离子结合行为的最早比较研究之一,表明柔性大环通过诱导配合机制显着提高碘离子的结合亲和力。与刚性WDG (K PBG /K WDG = 22.78)相比,柔性模拟PBG在碘化物结合时显示出22.78倍的荧光猝灭效率,表明其作为高灵敏度光学探针的潜力,并为工程动态超分子受体提供了一种新的策略。采用Friedel-Crafts反应合成了两种咔唑类大环探针PBG(柔性苯环)和WDG(刚性芴骨架)。利用核磁共振氢谱、紫外-可见吸收光谱和荧光光谱系统地研究了它们对碘离子(I-)的识别性能。通过Benesi-Hildebrand方程和非线性拟合的定量分析表明,柔性PBG通过诱导拟合的构象调整实现了更好的I-结合(K PBG = 1.387 × 105 M-1),而刚性WDG (K WDG = 6.089 × 103 M-1)受预组织腔几何结构的约束,遵循构象选择机制。这项工作阐明了构象动力学和控制阴离子识别的局部结构适应之间的协同相互作用。这些发现促进了可调、高亲和力阴离子受体的合理设计,并加深了对超分子体系构象调节的理解。
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引用次数: 0
Rotaxanes with integrated photoswitches: design principles, functional behavior, and emerging applications. 集成光开关的轮烷:设计原理,功能行为和新兴应用。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-10-31 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.179
Jullyane Emi Matsushima, Khushbu, Zuliah Abdulsalam, Udyogi Navodya Kulathilaka Conthagamage, Víctor García-López

Integrating molecular photoswitches into rotaxanes offers unique opportunities for precise control over their structural, dynamic, and functional properties. By harnessing light as a non-invasive stimulus with high spatial and temporal resolution, these photoswitches allow for the modulation of the rotaxanes' intra- and intermolecular interactions, optoelectronic properties, and shuttling dynamics. In this review, we discuss key examples of photoswitchable rotaxanes, organized according to the position of the photoswitch, either embedded in the axle or incorporated into the macrocycle. We examine the major classes of photoswitches used, including their switching mechanisms and the resulting influence on rotaxane operation. Due to their architectural versatility and precise light control, photoswitchable rotaxanes hold promise for a broad range of applications, including light-responsive molecular machines, smart materials, and biofunctional systems. However, emerging applications increasingly require rethinking and developing new structural designs that incorporate more efficient and advanced photoswitches to fully realize their potential.

将分子光开关集成到轮烷中为精确控制其结构、动态和功能特性提供了独特的机会。通过利用光作为具有高空间和时间分辨率的非侵入性刺激,这些光开关允许调制轮烷的分子内和分子间相互作用、光电特性和穿梭动力学。在这篇综述中,我们讨论了可光开关轮烷的主要例子,根据光开关的位置进行组织,要么嵌入在轴中,要么融入到大环中。我们研究了使用的主要类型的光开关,包括它们的开关机制和对轮烷操作的影响。由于其结构的通用性和精确的光控制,光开关轮烷具有广泛的应用前景,包括光响应分子机器,智能材料和生物功能系统。然而,新兴应用越来越需要重新思考和开发新的结构设计,以结合更高效和先进的光开关,以充分发挥其潜力。
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引用次数: 0
Recent advances in Norrish-Yang cyclization and dicarbonyl photoredox reactions for natural product synthesis. 天然产物合成中Norrish-Yang环化和二羰基光氧化还原反应的研究进展。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-10-30 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.177
Peng-Xi Luo, Jin-Xuan Yang, Shao-Min Fu, Bo Liu

In recent years, the Norrish-Yang cyclization and related photoredox reactions of dicarbonyls have been extensively utilized in natural product synthesis. This review summarizes the latest advancements in these reactions for constructing terpenoids, alkaloids, and antibiotics. Through Norrish-Yang cyclization, dicarbonyls (e.g., 1,2-diketones and α-keto amides) can efficiently construct sterically hindered ring structures, which can further undergo ring-opening or rearrangement reaction to assemble complex molecular frameworks. Additionally, quinone photoredox reactions involving single-electron transfer (SET) processes provide novel strategies for the stereoselective synthesis of useful structures such as spiroketals. This review, drawing on examples from recently reported natural product syntheses, elaborates on reaction mechanisms, factors governing regioselectivity and stereoselectivity, and the impact of substrate structures on reaction pathways. These reactions not only serve as robust tools for the streamlined synthesis of natural products but also establish a solid foundation for subsequent pharmaceutical investigations.

近年来,二羰基的Norrish-Yang环化及相关的光氧化还原反应在天然产物合成中得到了广泛的应用。本文综述了合成萜类、生物碱和抗生素的最新进展。通过诺里-杨环化,二羰基(如1,2-二酮和α-酮酰胺)可以有效地构建位阻环结构,并进一步进行开环或重排反应,组装复杂的分子框架。此外,涉及单电子转移(SET)过程的醌光氧化还原反应为立体选择性合成有用结构(如螺旋酮)提供了新的策略。本文以近年来报道的天然产物合成为例,详细阐述了反应机理、区域选择性和立体选择性的控制因素以及底物结构对反应途径的影响。这些反应不仅为天然产物的流线型合成提供了强有力的工具,而且为随后的药物研究奠定了坚实的基础。
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引用次数: 0
Comparative analysis of complanadine A total syntheses. 康普那定A全合成的比较分析。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-10-30 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.178
Reem Al-Ahmad, Mingji Dai

In this review, we summarize and compare four total syntheses of complanadine A, a complex and pseudo-dimeric lycopodium alkaloid with promising neurotrophic activity and potential for pain management. These four total syntheses are from the groups of Siegel, Sarpong, Tsukano, and Dai. Each of the four total syntheses contains innovative strategies and creative tactics, reflecting how emerging synthetic capabilities and concepts can positively impact natural product total synthesis.

在这篇综述中,我们总结和比较了四种全合成的康普那定A,一种具有神经营养活性和治疗疼痛潜力的复合和伪二聚石松生物碱。这四个全合成来自Siegel, Sarpong, Tsukano和Dai组。四种全合成中的每一种都包含创新策略和创造性战术,反映了新兴的合成能力和概念如何对天然产物的全合成产生积极影响。
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引用次数: 0
Insoluble methylene-bridged glycoluril dimers as sequestrants for dyes. 不溶性亚甲基桥接二聚乙二醇作为染料的螯合剂。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-10-29 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.176
Suvenika Perera, Peter Y Zavalij, Lyle Isaacs

Contamination of water bodies by micropollutants including industrial dyes is a worldwide health and environmental concern. We report the design, synthesis, and characterization of a series of methylene-bridged glycoluril dimers G2W1-G2W4 that are insoluble in water and that differ in the nature of their aromatic sidewalls (G2W4: benzene, G2W3: naphthalene, G2W1 and G2W2: triphenylene). We tested G2W1-G2W4 along with comparator H2 as solid-state sequestrants for a panel of five dyes (methylene blue, methylene violet, acridine orange, rhodamine 6G, and methyl violet 6B). We find that catechol-walled H2 (OH substituents) is a superior sequestrant compared to G2W1-G2W4 (OMe substituents). X-ray crystal structures for G2W1 and G2W3 suggest that the OMe groups fill their own cavity and thereby decrease their abilities as sequestrants. H2 achieved a removal efficiency of 94% for methylene blue whereas G2W1 demonstrated a 64% removal efficiency for methylene violet; both sequestration processes were largely complete within 10 minutes.

包括工业染料在内的微污染物对水体的污染是一个全球性的健康和环境问题。我们报道了一系列不溶于水且芳香侧壁性质不同的亚甲基桥接二聚体G2W1-G2W4的设计、合成和表征(G2W4:苯、G2W3:萘、G2W1和G2W2:三苯)。我们测试了G2W1-G2W4和比较剂H2作为五种染料(亚甲基蓝、亚甲基紫、吖啶橙、罗丹明6G和甲基紫6B)的固态螯合剂。我们发现儿茶酚壁H2 (OH取代基)与G2W1-G2W4 (OMe取代基)相比是一个更好的螯合物。G2W1和G2W3的x射线晶体结构表明,OMe基团填充了它们自己的空腔,从而降低了它们作为螯合物的能力。H2对亚甲基蓝的去除率为94%,而G2W1对亚甲基紫的去除率为64%;这两个封存过程基本上都在10分钟内完成。
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引用次数: 0
Halogenated butyrolactones from the biomass-derived synthon levoglucosenone. 从生物质合成物左旋葡萄糖酮中提取的卤代丁内酯。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-10-29 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.175
Johannes Puschnig, Martyn Jevric, Ben W Greatrex

Halogenated butyrolactones are found in a variety of bioactive materials and used for the construction of nucleoside analogues. Short procedures for their synthesis have been developed starting with levoglucosenone, which can be obtained in a single step from the pyrolysis of acid-treated cellulose. The processes use inexpensive reagents for the stereoselective C3 functionalization of the bicyclic ring system, with a subsequent Baeyer-Villiger oxidation affording the fluorinated, chlorinated, and brominated dideoxyribonolactones.

卤化丁内酯存在于各种生物活性材料中,并用于构建核苷类似物。从左旋葡萄糖酮开始,已经开发出了合成它们的短程序,左旋葡萄糖酮可以从酸处理的纤维素热解中一步得到。该工艺使用便宜的试剂对双环体系进行立体选择性C3功能化,随后的Baeyer-Villiger氧化得到氟化、氯化和溴化的二脱氧核糖内酯。
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引用次数: 0
Enantioselective radical chemistry: a bright future ahead. 对映选择性自由基化学:光明的未来。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-10-28 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.174
Anna C Renner, Sagar S Thorat, Hariharaputhiran Subramanian, Mukund P Sibi

This perspective is focused on enantioselective free radical reactions. It describes several important catalytic asymmetric strategies applied to enantioselective radical reactions, including chiral Lewis acid catalysis, organocatalysis, photoredox catalysis, chiral transition-metal catalysis and photoenzymatic catalysis. The application of electrochemistry to asymmetric radical transformations is also discussed.

这一观点的重点是对映选择性自由基反应。介绍了应用于对映选择性自由基反应的几种重要的催化不对称策略,包括手性路易斯酸催化、有机催化、光氧化还原催化、手性过渡金属催化和光酶催化。讨论了电化学在不对称自由基转化中的应用。
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引用次数: 0
Pathway economy in cyclization of 1,n-enynes. 1,n-炔环化的途径经济性。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-10-27 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.173
Hezhen Han, Wenjie Mao, Bin Lin, Maosheng Cheng, Lu Yang, Yongxiang Liu

This review presents a paradigm-shifting "pathway economy" strategy for 1,n-enyne cyclization, enabling divergent construction of complex molecular architectures from a single substrate class. Through mechanistic-guided modulation of catalysts, solvents, ligands, and angle strain, this approach achieves unprecedented reaction pathway control while demonstrating superior temporal and step efficiency compared to conventional methods. The work establishes a sustainable framework for rapid molecular diversification, offering transformative potential for green chemistry and pharmaceutical applications. By unifying mechanistic insights with practical synthetic design, this review provides valuable guidance for future innovations in precision organic synthesis.

这篇综述提出了一种范式转换的“途径经济”策略,用于1,n-炔环化,使单一底物类的复杂分子结构的不同构建成为可能。通过对催化剂、溶剂、配体和角度应变的机械引导调制,该方法实现了前所未有的反应路径控制,同时与传统方法相比,显示出优越的时间和步骤效率。这项工作为快速分子多样化建立了一个可持续的框架,为绿色化学和制药应用提供了变革潜力。通过将机理见解与实际合成设计相结合,本文综述为未来精密有机合成的创新提供了有价值的指导。
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引用次数: 0
Research towards selective inhibition of the CLK3 kinase. 选择性抑制CLK3激酶的研究。
IF 2.1 4区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2025-10-24 eCollection Date: 2025-01-01 DOI: 10.3762/bjoc.21.172
Vinay Kumar Singh, Frédéric Justaud, Dabbugoddu Brahmaiah, Nangunoori Sampath Kumar, Blandine Baratte, Thomas Robert, Stéphane Bach, Chada Raji Reddy, Nicolas Levoin, René L Grée

The cdc2-like kinases (CLKs), are a family of kinases that attracted recently the interest of scientists due to their significant biological roles, in particular in the regulation of the mRNA splicing process. Among the four isoforms of CLKs, CLK3 is the one for which the biological roles are less understood, in part because no selective inhibitor of this challenging kinase has been found to date. Based on structural analysis of the CLKs we have identified the lysine 241, present only in CLK3, as an attractive residue to design inhibitors with increased affinity towards this kinase as compared to the three other isoforms CLK1, CLK2, and CLK4. Based on this observation, we have been able to transform a molecule (DB18) previously established with a very low activity on CLK3 into a derivative VS-77 which has now a significant affinity toward CLK3 (IC50 = 0.3 μM). Thus, VS-77 appears as a new pan-inhibitor of the CLK family.

cdc2样激酶(CLKs)是一个激酶家族,由于其重要的生物学作用,特别是在mRNA剪接过程的调节中,最近引起了科学家的兴趣。在clk的四种亚型中,CLK3是生物学作用了解较少的一种,部分原因是迄今为止还没有发现这种具有挑战性的激酶的选择性抑制剂。基于对clk的结构分析,我们已经确定了仅存在于CLK3中的赖氨酸241,与CLK1, CLK2和CLK4相比,它是一个有吸引力的残基,可以设计对该激酶具有更高亲和力的抑制剂。基于这一观察,我们已经能够将先前建立的对CLK3具有非常低活性的分子(DB18)转化为衍生物VS-77,该衍生物现在对CLK3具有显著的亲和力(IC50 = 0.3 μM)。因此,VS-77作为CLK家族的一种新的泛抑制剂出现。
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引用次数: 0
期刊
Beilstein Journal of Organic Chemistry
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