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Salmonella as a Vaccine Vector for Influenza Virus 沙门氏菌作为流感病毒疫苗载体的研究
Pub Date : 2013-01-01 DOI: 10.1016/j.provac.2013.06.005
Thi Thu Hao Van , Yu-Chen Lin , Thi Nhu Ngoc Van , Thi Quy Nguyen , Thi Thu Hong Le , Thi Huyen Do , Nam Hai Truong , Peter J. Coloe , Peter M. Smooker

Salmonella have many advantages as a vaccine delivery vector, they are easy to produce, easy to administer (orally), and able to elicit humoral immunity which induces serum and secretory IgA antibody. In addition, they induce robust cell-mediated immune responses such as cytotoxic and memory T lymphocytes. Moreover, when Salmonella is being used as a vaccine vector, immune responses against both Salmonella and the heterologous antigen will be induced, providing protection against infection by Salmonella and the heterologous pathogen. In this study, Salmonella STM-1, an attenuated strain which was developed at RMIT and licensed for the prevention of salmonellosis in poultry, is used as a delivery vector for an influenza antigen. Different strategies are used to display the influenza hemagglutinin (HA) antigen in various destinations to optimise protein expression and immunogenicity. Comparing the immune responses in a mouse trial, mice which were vaccinated with Salmonella to express the HA protein inside cell (under the control of the starvation induced S. enterica sspA promoter) did not show robust T cell and humoral responses in comparison to mice vaccinated with HA protein expressed in yeast. Therefore other systems are being engineered, including one to display the HA antigen on the outer membrane of Salmonella and another to secrete it into the media. Directing heterologous antigen for surface display or secretion may increase humoral responses. Expression of HA protein in these systems was detected by western blot analysis. An animal trial is underway to examine the immunogenicity of these promising systems.

沙门氏菌作为疫苗载体具有许多优点,它们易于生产,易于口服,并且能够引发体液免疫,诱导血清和分泌IgA抗体。此外,它们诱导强大的细胞介导的免疫反应,如细胞毒性和记忆T淋巴细胞。此外,当沙门氏菌被用作疫苗载体时,将诱导针对沙门氏菌和异源抗原的免疫反应,提供对沙门氏菌和异源病原体感染的保护。在这项研究中,沙门氏菌STM-1是RMIT开发的一种减毒菌株,并被许可用于预防家禽沙门氏菌病,它被用作流感抗原的递送载体。不同的策略用于显示流感血凝素(HA)抗原在不同的目的地,以优化蛋白表达和免疫原性。比较小鼠试验中的免疫反应,接种沙门氏菌在细胞内表达HA蛋白的小鼠(在饥饿诱导的肠链球菌sspA启动子的控制下)与接种酵母表达HA蛋白的小鼠相比,没有表现出强大的T细胞和体液反应。因此,其他系统正在被设计,包括一个在沙门氏菌的外膜上显示HA抗原,另一个将其分泌到培养基中。引导异源抗原表面展示或分泌可增加体液反应。western blot检测HA蛋白在这些系统中的表达。一项动物试验正在进行中,以检查这些有希望的系统的免疫原性。
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引用次数: 5
Production of Cell Culture Based Anti- rabies Vaccine in Ethiopia 埃塞俄比亚细胞培养抗狂犬病疫苗的生产
Pub Date : 2013-01-01 DOI: 10.1016/j.provac.2013.06.002
Birhanu Hurisa , Abebe Mengesha , Bethlehem Newayesilassie , Sisay Kerga , Gezahegn Kebede , Denis Bankovisky , Arthem Metlin , Kelbessa Urga

Prevention and control of rabies in the world will require international efforts to increase the availability and use of high quality cell-culture rabies vaccines for use in human and veterinary. An important aspect of activities to ensure such availability is transfer of technologies to developing countries for production of these vaccines. Methods for Rabies Virus manipulation have changed fundamentally from random attenuation to defined modifications. In 2001, WHO issued a resolution for the complete replacement of nerve tissue vaccines by 2006 with cell-culture rabies vaccines. However, sheep brain derived Fermi type rabies vaccine is still being manufactured and utilized for the majority of exposed patients in Ethiopia. Therefore, production of a safer and effective cell culture based anti-rabies vaccine is needed. Currently the Ethiopian government has heavily invested in upgrading the facilities required to produce a rabies vaccine in keeping with WHO recommendation. Rabies virus suspensions were obtained from vero cells cultivated on roller bottles after infection with the Pasteur virus strain (PV) and Evelyn Rokitniki Abelseth (ERA). Initially the titer of the obtained virus and multiplicity of infection of the viruses had to be optimized; therefore in rabies virus infected cultures, higher virus yields was obtained when infected with 0.001ERA virus/cell and incubated at 37 °C in 5% CO2 for 96hr and 0.01PV/cell incubated at 37 °C in 5% CO2 for 48hr. Based on the results it is conclude that, ERA virus 0.001ID/cell with incubation period of 96 h and was selected as best titer for rabies vaccine production.

在世界上预防和控制狂犬病将需要国际努力,增加供人类和兽医使用的高质量细胞培养狂犬病疫苗的供应和使用。确保提供这种疫苗的活动的一个重要方面是向发展中国家转让生产这些疫苗的技术。狂犬病毒的操作方法已经从随机衰减到定义修饰发生了根本性的变化。2001年,世卫组织发布了一项决议,要求到2006年用细胞培养狂犬病疫苗完全替代神经组织疫苗。然而,仍在生产绵羊脑源性费米型狂犬病疫苗,并为埃塞俄比亚大多数暴露患者使用。因此,需要生产一种更安全有效的基于细胞培养的抗狂犬病疫苗。目前,埃塞俄比亚政府已投入大量资金,按照世卫组织的建议升级生产狂犬病疫苗所需的设施。用巴斯德病毒株(PV)和Evelyn Rokitniki Abelseth (ERA)感染滚轮瓶培养的vero细胞获得狂犬病毒悬液。最初需要优化获得的病毒滴度和病毒感染的多重度;因此,在感染狂犬病毒的培养物中,感染0.001 pv /细胞,在37℃5% CO2中孵育96小时,感染0.01PV/细胞,在37℃5% CO2中孵育48小时,获得更高的病毒产量。结果表明,ERA病毒0.001ID/细胞孵育96 h为生产狂犬病疫苗的最佳滴度。
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引用次数: 20
Enhancement of the Immunity of Piglets to Pseudorabies Vaccine with Plasmids Containing Interleukin-6 Gene and CpG Motifs Encapsulated in Chitosan Nanoparticles 壳聚糖纳米粒包封含有白细胞介素-6基因和CpG基序的质粒增强仔猪对伪狂犬病疫苗的免疫力
Pub Date : 2013-01-01 DOI: 10.1016/j.provac.2013.06.003
Jie Huang , Jian-Lin Chen , Ye Wang , Huan Zhang , Yi Yang, Xiao-Ping Wan, Xiao Yang, Xue-Bin Lv , Hong-Ning Wang, Ze-Zhou Wang , Jiang-Ling Li , Rong Gao

For the sake of exploring a safe and effective immune potentiator to promote the immune responses of swine to Pseudorabies vaccine, the chitosan nanoparticles (CNP) were prepared by use of ionotropic gelation method to encapsulate the recombinant VR1020 eukaryotic plasmids which respectively containing pig interleukin-6 gene (VPIL6) and the combination of PIL-6 gene and immunostimulatory sequences consisted of 11 CpG motifs (VPIL6C), designated respectively as VPIL6-CNP and VPIL6C-CNP. Then forty 21-day-old hybrid piglets were divided into four groups and intramuscularly injected respectively with 0.5 mg the VPIL6C-CNP, VPIL6-CNP, CpG and VR1020- CNP together with the attenuated Pseudorabies vaccine. The bloods were collected from the vaccinated piglets to detect the changes of immunoglobulin, specific antibody, IL-2, IL-4, IL-6, IFN-γ and immune cells. The results were found that in comparison with the control groups with VR1020-CNP, the content of immunoglobulin, and specific antibody significantly increased in the sera from the VPIL6C-CNP and VPIL6-CNP groups from 14 to 56 days post inoculation (P<0.05), and so did the level of IL-2, IL-4, IL-6 and IFN-γ of the treated groups. Meanwhile, the number of lymphocytes and monocytes also markedly elevated in the treated groups (P<0.05). The immune responses of VPIL6C-CNP piglets were notably stronger than group VRIL6-CNP and VRCpG. These suggested that VPIL6C-CNP could significantly enhance the immunity of piglets to Pseudorabies vaccine and is a promising effective adjuvant to promote the protection of pig against Pseudorabies.

为探索一种安全有效的免疫增强剂促进猪对伪狂犬病疫苗的免疫应答,采用亲离子化凝胶法制备壳聚糖纳米颗粒(CNP),将分别含有猪白细胞介素-6基因(VPIL6)和由11个CpG基序(VPIL6C)组成的免疫刺激序列(VPIL6 -CNP和VPIL6C-CNP)的重组真核质粒VR1020包封。将40头21日龄杂交仔猪分为4组,分别肌肉注射0.5 mg VPIL6C-CNP、VPIL6-CNP、CpG和VR1020- CNP,同时注射假狂犬减毒疫苗。采集接种仔猪血液,检测免疫球蛋白、特异性抗体、IL-2、IL-4、IL-6、IFN-γ和免疫细胞的变化。结果发现,与VR1020-CNP对照组相比,接种后14 ~ 56 d, VPIL6C-CNP组和VPIL6-CNP组血清中免疫球蛋白和特异性抗体含量显著升高(P<0.05), IL-2、IL-4、IL-6和IFN-γ水平显著升高。同时,各治疗组淋巴细胞和单核细胞数量均显著升高(p < 0.05)。VRIL6-CNP和VRCpG组仔猪免疫应答显著增强。由此可见,VPIL6C-CNP能显著增强仔猪对伪狂犬疫苗的免疫力,是一种很有前景的促进猪对伪狂犬保护的有效佐剂。
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引用次数: 1
Potentiation of Immunity of Piglets to Mycoplasma Hyopneumoniae Vaccine with Fused Gene for Pig IL-4 and IL-6 Embodied in Chitosan Nanoparticles 壳聚糖纳米颗粒融合猪IL-4和IL-6基因增强仔猪对肺炎支原体疫苗免疫的研究
Pub Date : 2013-01-01 DOI: 10.1016/j.provac.2013.06.004
Xiao Yang , Yong-Le Xiao , Jian-Lin Chen , Chi Chen , Huan Zhang , Xiao-Ping Wan, Xue- Bin Lv , Jiang-Ling Li , Ze- Zhou Wang , Rong Gao

The novel reco mbinant euka ryotic VRPIL4/ 6 p lasmid, the secretory VR1020 vector containing fused pig IL-6 and IL-4 genes, was encapsulated with chitosan nanoparticles (CNP) prepared by use of ionotropic gelat ion method and then used to inoculate intramuscularly forty 14-day-old piglets using 0.5, 1.0 or 1.5 mg/per anima l, which were simu ltaneously injected with inactivated Mycoplasma hyopneumoniae vaccine and challenged on 10 weeks post vaccination, which were designated as group A1, A2 and A3. Blood was collected every two weeks fro m the piglets after vaccination to detect the changes in immunoglobulin, specific antibod y, IL-2, IL-4, IL-6, IFN-γ and immune ce lls. Co mpared to the control piglets with VR1020-CNP, the concentration of Ig G, IgA and IgM, specific antibody, interleukins and IFN-γ significantly increased in the sera of the groups treated with the fusion genes fro m 14 to 70 days after vaccination (P<0.05); furthermore, the nu mber of TH, TC and CD3+ T ce lls was raised significantly in the blood of the treated piglets (P<0.05). Meanwhile, the ly mphocytes and monocytes also significantly rose in the treated groups (P<0.05). The hu mora l and ce llu lar immune inde xes of the A3 group increased to different e xtents in co mparison with those of A 1 and A 2 group fro m 14 to 56 days post inoculation (P>0.05 or P<0.05). The protection against challenge with viru lent M hyo and growth performance of the treated pigs is markedly better than those of the control anima l (P<0.05). These results indicated that VRPIL4/6 entrapped with CNP can enhance the humora l and cellu lar immunity of pigs to Mycoplasma hyopneumoniae vaccine, and elevate the immunoprotection level of treated anima l, wh ich could facilitate the development of effective immunoadjuvant against Mycoplasma hyopneumoniae of pig.

采用亲离子凝胶法制备的壳聚糖纳米颗粒(CNP)包封融合猪IL-6和IL-4基因的新型重组VRPIL4/ 6p质粒,分别以0.5、1.0或1.5 mg/头接种40头14日龄仔猪,同时注射灭活肺炎支原体疫苗,接种后10周攻毒,设为A1组。A2和A3。接种后每两周采血一次,检测免疫球蛋白、特异性抗体y、IL-2、IL-4、IL-6、IFN-γ和免疫细胞的变化。与VR1020-CNP对照仔猪相比,接种后14 ~ 70 d,融合基因处理组血清中igg、IgA和IgM、特异性抗体、白细胞介素和IFN-γ的浓度显著升高(p < 0.05);此外,处理仔猪血液中TH、TC和CD3+ T细胞数量显著升高(p < 0.05)。同时,各处理组的淋巴细胞和单核细胞也显著升高(P<0.05)。接种后14 ~ 56 d,与a1、a2组相比,A3组的血清免疫指数和白细胞免疫指数均有不同程度的升高(p < 0.05或p < 0.05)。处理猪的抗毒力和生长性能均显著优于对照组(p < 0.05)。上述结果表明,CNP包埋VRPIL4/6可增强猪对猪肺炎支原体疫苗的体液免疫和细胞免疫,提高猪对猪肺炎支原体疫苗的免疫保护水平,有助于研制出有效的猪肺炎支原体免疫佐剂。
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引用次数: 4
Reduction of Newcastle Disease Vaccine Dose Using a Novel Adjuvant for Cellular Immune Response in Poultry 用一种新型佐剂减少家禽细胞免疫应答的新城疫疫苗剂量
Pub Date : 2013-01-01 DOI: 10.1016/j.provac.2013.06.006
J. Ben Arous , S. Deville , J.K. Pal , S. Baksi , F. Bertrand , L. Dupuis

Water-in-mineral oil adjuvants induce a strong long-term humoral immune response and are widely used in poultry vaccines. New adjuvants that also increase the cellular immune response could help to extend the vaccinal cross- protection against different viral strains or serotypes. We have developed a new water-in-oil adjuvant, MontanideTM ISA 71 VG, based on a specific enriched light mineral oil which stimulates both humoral and cellular immune responses. Here, using a Newcastle Disease vaccine model, we demonstrate that this new adjuvant is safe, can improve vaccine efficacy in poultry and could allow the reduction of injection doses of inactivated poultry vaccines.

矿物油水佐剂可诱导强烈的长期体液免疫反应,广泛应用于家禽疫苗。新的佐剂也可以增加细胞免疫反应,有助于延长疫苗对不同病毒株或血清型的交叉保护。我们开发了一种新的油包水佐剂,MontanideTM ISA 71 VG,基于一种特殊的富集轻矿物油,可以刺激体液和细胞免疫反应。在这里,我们使用一种新城疫疫苗模型,证明了这种新的佐剂是安全的,可以提高疫苗在家禽中的效力,并且可以减少灭活疫苗的注射剂量。
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引用次数: 17
Beyond RV144 Efficacy Results: An Update 超越RV144的疗效结果:更新
Pub Date : 2013-01-01 DOI: 10.1016/j.provac.2013.06.010
Punnee Pitisuttithum , Jean-Louis Excler , Jerome Kim

The RV144 efficacy trial conducted in Thailand provided the first evidence that an HIV vaccine could provide a modest level of protection against HIV acquisition (31.2% at 42 months of follow-up) in populations at low risk for HIV infection. Vaccine efficacy appeared to be higher (60%) at 12 months post vaccination, suggesting an early, but nondurable, vaccine effect. This breakthrough finding led to identification of immune correlates of risk, antibodies directed against the V2 loop, paving the way to new vaccine designs and clinical trials to better characterization of the vaccine-induced adaptive and innate humoral and cell-mediated immune responses in peripheral and mucosal compartments. Whether the RV144 correlates of risk are universal and apply to other populations at higher risk for HIV acquisition and other modes of transmission (rectal, injecting drug users) is unknown and remains to be explored. Future efficacy trials using a similar vaccine concept tested in high-risk heterosexual populations and in men having sex with men are planned.

在泰国进行的RV144有效性试验首次提供了证据,证明艾滋病毒疫苗可以在艾滋病毒感染低风险人群中提供中等水平的预防艾滋病毒感染的保护(随访42个月时为31.2%)。在接种疫苗12个月后,疫苗效力似乎更高(60%),表明疫苗的早期但不持久的效果。这一突破性发现鉴定了风险的免疫相关因素,针对V2环的抗体,为新疫苗设计和临床试验铺平了道路,以更好地表征疫苗诱导的外周和粘膜室的适应性和先天体液和细胞介导的免疫反应。RV144与风险的相关性是否具有普遍性,是否适用于其他艾滋病毒感染风险较高的人群和其他传播方式(直肠、注射吸毒者)尚不清楚,仍有待探索。未来的有效性试验计划使用类似的疫苗概念,在高危异性恋人群和男男性行为者中进行试验。
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引用次数: 9
Adjuvant Formulations Designed to Improve Swine Vaccine Stability: Application to PCV2 Vaccines 提高猪疫苗稳定性的佐剂配方:在PCV2疫苗中的应用
Pub Date : 2013-01-01 DOI: 10.1016/j.provac.2013.06.007
J. Ben Arous , F. Bertrand , J. Gaucheron , O.A. Verkhovsky , A.P. Kotelnikov , E.V. Shemelkov , K.P. Alekseev , L. Dupuis

Porcine circovirus associated diseases (PCVADs) are economically important diseases of domestic pigs caused by porcine circovirus type 2 (PCV2). PCV2 vaccination is usually performed with adjuvanted inactivated formulations and is necessary to control PCVADs and subclinical PCV2 related body weight losses in pig farming. An important issue with PCV2 vaccine formulation is that PCV2 antigenic media often have properties which destabilize vaccine formulations. Vaccine adjuvants are a key parameter in modern vaccination closely linked to galenic properties of vaccine formulations, and galenic stability is necessary to insure efficacy stability during vaccine shelf life. Here we show that especially designed formulations based on MontanideTM ISA 11R VG (Oil in water) and MontanideTM ESSAI Gel R (polymer) adjuvants are able to resist to very destabilizing antigenic media and conditions while keeping safety parameters and efficacy at requested levels.

猪圆环病毒相关病(PCVADs)是由猪圆环病毒2型(PCV2)引起的家猪重要的经济疾病。PCV2疫苗接种通常使用佐剂灭活配方进行,对于控制猪场PCVADs和与PCV2相关的亚临床体重损失是必要的。PCV2疫苗制剂的一个重要问题是PCV2抗原介质通常具有使疫苗制剂不稳定的特性。疫苗佐剂是现代疫苗接种的关键参数,与疫苗配方的galenic特性密切相关,而galenic稳定性是确保疫苗保质期内疗效稳定的必要条件。在这里,我们展示了基于MontanideTM ISA 11R VG(水中油)和MontanideTM ESSAI Gel R(聚合物)佐剂的特别设计的配方能够抵抗非常不稳定的抗原介质和条件,同时保持安全参数和功效在要求的水平。
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引用次数: 3
Strategies to Reduce Campylobacter Colonisation in Chickens 减少弯曲杆菌在鸡体内定植的策略
Pub Date : 2013-01-01 DOI: 10.1016/j.provac.2013.06.008
Manvendra Saxena , Binu John , Monica Mu , Thi Thu Hao Van , Aya Taki , Peter J. Coloe , Peter M. Smooker

Campylobacter jejuni is a gram negative bacterium which is one of the leading causes of bacterial related acute entritis in the developing world. C. jejuni is also linked to auto- immune diseases such as Miller- Fisher syndrome and Guillain- Barre Syndrome. C. jejuni is highly effective in colonizing chicken intestinal mucosa without causing any clinical symptoms and the consumption of poultry meat is the major source of transmission of bacteria to humans. One of the approaches to reduce Campylobacter related illnesses is to reduce the burden of Campylobacters in chickens. This can be achieved by vaccinating chickens against Campylobacter; however, various approaches to develop a vaccine against Campylobacter have yet to yield a commercial vaccine. One approach to develop a new class of vaccines against Campylobacter or other pathogens is to use an attenuated Salmonella autotrophic mutant as a vector to deliver antigens of Campylobacter origin to chickens. Our results indicate that Salmonella mutants can be effectively used as vector to deliver antigens of Campylobacter origin for vaccine purposes. However, before this method can be commercialized several parameters including the choice of suitable antigen or antigens needs to be evaluated.

空肠弯曲杆菌是一种革兰氏阴性菌,是发展中国家细菌性急性肠炎的主要病因之一。空肠梭菌也与自身免疫性疾病如米勒-费希尔综合征和格林-巴利综合征有关。空肠梭菌在鸡肠黏膜中定植非常有效,而不会引起任何临床症状,食用禽肉是细菌传播给人类的主要来源。减少弯曲杆菌相关疾病的途径之一是减轻鸡的弯曲杆菌负担。这可以通过给鸡接种弯曲杆菌疫苗来实现;然而,开发针对弯曲杆菌的疫苗的各种方法尚未产生商业疫苗。开发针对弯曲杆菌或其他病原体的新型疫苗的一种方法是使用减毒的沙门氏菌自养突变体作为载体,将弯曲杆菌源抗原传递给鸡。我们的研究结果表明,沙门氏菌突变体可以有效地作为载体传递弯曲杆菌源抗原用于疫苗目的。然而,在这种方法商业化之前,需要评估几个参数,包括选择合适的抗原或抗原。
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引用次数: 14
Clinical performance and safety of the ID adapter, a prototype intradermal delivery technology for vaccines, drugs, and diagnostic tests ID适配器的临床性能和安全性,这是一种用于疫苗、药物和诊断测试的皮内递送技术原型
Pub Date : 2012-01-01 DOI: 10.1016/j.provac.2012.04.017
Courtney Jarrahian , Darin Zehrung , Eugene Saxon , Emily Griswold , Leslie Klaff

Several vaccines, diagnostic tests, and medications are currently delivered intradermally, and it is likely that this route of administration will grow in importance. A phase I clinical study was conducted to evaluate the intradermal (ID) adapter, a prototype intradermal delivery aid, for safety and precision of injection. Healthy adult volunteers received two injections each of 0.1 mL of sterile saline solution in the upper deltoid region of the arm using the ID adapter. Injection performance was determined by the proportion of injections delivered to the dermal layer by measuring wheals and fluid leakage, and through ultrasound imaging. Of the 40 study injections, 100% were determined to be successful intradermal injections. Leakage of liquid at the injection site was negligible. Performance was similar with the bevel orientation both upward and downward. Minor bleeding and skin abrasions were the only reported adverse events. Injections were well tolerated based on self-reporting of pain of injection. Based on these results, the ID adapter appears to be safe and effective as an alternative to the Mantoux method of ID delivery for future use in clinical evaluations of ID delivery of vaccines, skin tests, and other drugs.

目前有几种疫苗、诊断测试和药物是经皮内给药的,这种给药途径很可能会变得越来越重要。我们进行了一项I期临床研究,以评估皮内(ID)适配器,一种皮内给药辅助装置的原型,对注射的安全性和准确性进行了评估。健康成年志愿者使用ID适配器在手臂上三角肌区注射两次,每次0.1 mL无菌生理盐水溶液。注射性能是通过测量车轮和液体泄漏以及超声成像来确定注射到真皮层的比例。在40次研究注射中,100%被确定为成功的皮内注射。注射部位的液体泄漏可以忽略不计。斜角向上和向下方向的性能相似。轻微出血和皮肤擦伤是唯一报告的不良事件。根据自我报告的注射疼痛,注射耐受性良好。基于这些结果,ID适配器似乎是安全有效的,可以替代Mantoux的ID传递方法,用于将来对疫苗、皮肤试验和其他药物的ID传递进行临床评估。
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引用次数: 17
Bioinformatics analysis of bacterial protective antigens in manually curated Protegen database 人工整理Protegen数据库中细菌保护性抗原的生物信息学分析
Pub Date : 2012-01-01 DOI: 10.1016/j.provac.2012.04.002
Yongqun He, Zuoshuang Xiang

Protective antigens are targeted by host acquired immunity and able to induce protection against infectious diseases. To identify enriched features that do not typically exist in non-protective protein antigens, this study analyzed 201 protective protein antigens from Gram-negative bacteria and 69 protective protein antigens from Gram-positive bacteria available in the manually curated Protegen protective antigen database. Our study found that 64% of Gram+ protective antigens are extracellular or cell wall proteins and 48% of protective antigens in Gram-bacteria belong to extracellular or outer membrane proteins. Approximately 54% and 40% protective antigens in Gram+ and Gram-, respectively, are adhesins or adhesin-like proteins. Many conserved domains (motifs), such as Autotransporter and TonB domains, are enriched in protective antigens. A protection method based on SVM (Support Vector Machine) classification demonstrates 92% of true positive rate of sequence-based protection. This study represents a pioneer effort in the identification and prediction of specific patterns in protective antigens.

保护性抗原是宿主获得性免疫的目标,能够诱导对传染病的保护。为了鉴定非保护性蛋白抗原中通常不存在的富集特征,本研究分析了人工管理的Protegen保护性抗原数据库中来自革兰氏阴性菌的201种保护性蛋白抗原和来自革兰氏阳性菌的69种保护性蛋白抗原。我们的研究发现,革兰氏菌中64%的保护性抗原为细胞外蛋白或细胞壁蛋白,48%的保护性抗原为细胞外蛋白或外膜蛋白。在Gram+和Gram-中,大约54%和40%的保护性抗原分别是黏附素或黏附素样蛋白。许多保守结构域(基元),如Autotransporter和TonB结构域,在保护性抗原中富集。基于支持向量机(SVM)分类的保护方法,序列保护的真阳性率达到92%。这项研究代表了在保护性抗原的特定模式的识别和预测的先驱努力。
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引用次数: 14
期刊
Procedia in vaccinology
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