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Avian telencephalon and cerebellum volumes can be accurately estimated from digital brain endocasts. 鸟类端脑和小脑的体积可以通过数字脑内模准确估计。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-22 DOI: 10.1098/rsbl.2024.0596
Aubrey R Keirnan, Felipe Cunha, Sara Citron, Gavin Prideaux, Andrew N Iwaniuk, Vera Weisbecker

For studies of the evolution of vertebrate brain anatomy and potentially associated behaviours, reconstructions of digital brain endocasts from computed tomography scans have revolutionized our capacity to collect neuroanatomical data. However, measurements from digital endocasts must be validated as reflecting actual brain anatomy, which is difficult because the collection of soft tissue information through histology is laborious and time-consuming. In birds, the reliability of digital endocast measurements as volume proxies for the two largest brain regions-the telencephalon and cerebellum-remains to be validated despite their use as proxies, e.g. of cognitive performance or flight ability. We here use the largest dataset of histology and digital endocasts to date, including 136 species from 25 avian orders, to compare digital endocast surface area measurements with actual brain volumes of the telencephalon, cerebellum and whole-brain endocast. Using linear and phylogenetically informed regression analyses, we demonstrate that endocast surfaces are strongly correlated with their brain volume counterparts for both absolute and relative size. This provides empirical support for using endocast-derived cerebellar and telencephalic surface areas in existing and future studies of living and extinct birds, with potential to expand to the dinosaur-bird transition in the future.

为了研究脊椎动物大脑解剖学的进化和潜在的相关行为,通过计算机断层扫描重建数字大脑模型已经彻底改变了我们收集神经解剖学数据的能力。然而,来自数字模型的测量必须被验证为反映实际的大脑解剖结构,这是困难的,因为通过组织学收集软组织信息是费力和耗时的。在鸟类中,数字内胆测量作为两个最大的大脑区域——端脑和小脑——体积代理的可靠性仍有待验证,尽管它们被用作代理,例如认知表现或飞行能力。我们使用迄今为止最大的组织学和数字内质模型数据集,包括来自25个鸟类目的136个物种,将数字内质模型表面积测量值与端脑、小脑和全脑内质模型的实际脑体积进行比较。使用线性和系统发育信息回归分析,我们证明了内质表面在绝对和相对大小上与它们的脑容量密切相关。这为在现有和未来对现存和已灭绝鸟类的研究中使用内源性细胞衍生的小脑和端脑表面积提供了经验支持,并有可能在未来扩展到恐龙-鸟类的过渡。
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引用次数: 0
Female gorillas form highly stable dominance relationships. 雌性大猩猩形成高度稳定的统治关系。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-22 DOI: 10.1098/rsbl.2024.0556
Nikolaos Smit, Martha M Robbins

Animals commonly form dominance relationships that determine the priority of access to resources and influence fitness. Dominance relationships based on age, immigration order or nepotism (alliances with kin) conventions are usually more stable than those based on intrinsic characteristics such as physical strength. Unlike most mammals, female gorillas disperse from their groups, typically more than once in their lifetimes, disrupting their group tenures and/or any alliances. Thus, we predicted that they form unstable dominance relationships that are not based on conventions. Contrarily, using a 24-year dataset on five groups of both gorilla species, we found that females form strikingly stable dominance relationships, maintained over their whole co-residence in a group (mean dyadic co-residence = 4.8, max = 17.3 years). Specifically, we observed rank reversals in only two out of 92 female dyads, and all other rank improvements resulted from emigration or death of higher-ranking females (passive mobility). These results mirror observations in chimpanzees, suggesting that dominance dynamics might have deep roots in hominid evolution. Our study challenges a hypothesized link between hierarchy instability and dispersal, particularly among animals in which fitness consequences of rank improvement may not be great enough to counterbalance the potentially high costs of challenging higher-ranking individuals.

动物通常会形成支配关系,这种关系决定了获得资源的优先级,并影响了适合度。基于年龄、移民顺序或裙带关系(与亲属结盟)惯例的优势关系通常比基于内在特征(如体力)的优势关系更稳定。与大多数哺乳动物不同,雌性大猩猩通常会在一生中不止一次地离开它们的群体,破坏它们的群体任期和/或任何联盟。因此,我们预测它们会形成不稳定的支配关系,这种关系不是基于惯例的。相反,通过对这两种大猩猩的5个种群的24年数据分析,我们发现雌性形成了非常稳定的优势关系,在它们共同居住的整个群体中保持稳定(平均二元共同居住= 4.8年,最长= 17.3年)。具体地说,我们观察到92对女性中只有2对的排名逆转,其他所有排名的提高都是由于高排名女性的移民或死亡(被动流动)。这些结果反映了对黑猩猩的观察,表明优势动力可能在人类进化中有很深的根源。我们的研究挑战了等级不稳定和分散之间的假设联系,特别是在那些等级提高的适应度结果可能不足以抵消挑战更高等级个体的潜在高成本的动物中。
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引用次数: 0
Partner fidelity, not geography, drives co-diversification of gut microbiota with hominids.
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-29 DOI: 10.1098/rsbl.2024.0454
Andrew H Moeller

Bacterial strains that inhabit the gastrointestinal tracts of hominids have diversified in parallel (co-diversified) with their host species. The extent to which co-diversification has been mediated by partner fidelity between strains and hosts or by geographical distance between hosts is not clear due to a lack of strain-level data from clades of hosts with unconfounded phylogenetic relationships and geographical distributions. Here, I tested these competing hypotheses through meta-analyses of 7121 gut bacterial genomes assembled from wild-living ape species and subspecies sampled throughout their ranges in equatorial Africa. Across the gut bacterial phylogeny, strain diversification was more strongly associated with host phylogeny than with geography. In total, approximately 14% of the branch length of the gut bacterial phylogeny showed significant evidence of co-diversification independent of geography, whereas only approximately 4% showed significant evidence of diversification associated with geography independent of host phylogeny. Geographically co-occurring heterospecific hosts (Pan and Gorilla) universally maintained distinct co-diversified bacterial strains. Strains whose diversification was associated with geography independent of host phylogeny included clades of Proteobacteria known to adopt free-living lifestyles (e.g. Escherichia). These results show that co-diversification of gut bacterial strains with hominids has been driven primarily by fidelity of strains to host lineages rather than geography.

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引用次数: 0
Demystifying the functions of the mitochondrial ORFan proteins in bivalves with doubly uniparental inheritance. 揭示双双亲遗传双壳类动物线粒体ORFan蛋白的功能。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-15 DOI: 10.1098/rsbl.2024.0564
Julie Brémaud, Alizée Debelli, Hajar Hosseini Khorami, Donald T Stewart, Annie Angers, Bernard Angers, Sophie Breton

Strict maternal inheritance of mitochondria is known to be the rule in animals, but over 100 species across six orders of bivalves possess doubly uniparental inheritance (DUI) of mitochondria. Under DUI, two distinctive sex-specific mitogenomes coexist. In marine and freshwater mussels, each mitogenome has an additional protein-coding gene, called female- and male-specific open reading frame or forf and morf, respectively. The function(s) of the associated FORF and MORF proteins remain unknown. Herein, we show that these proteins present similar tissue expression patterns in two distantly related DUI species: MORF was only expressed in male gonads, whereas FORF was expressed in all tissues of both sexes in the marine mussel Mytilus edulis and the freshwater mussel Venustaconcha ellipsiformis. Moreover, MORF was only expressed during the reproductive season, while FORF presented no clear seasonality pattern in M. edulis. Immunocytochemistry revealed the presence of both proteins in mitochondria and acrosomes of late spermatids and mature sperm. We hypothesize that MORF has a key function in spermatogenesis, while FORF has a more general function in both sexes. We also propose that both proteins may be involved in the fertilization process. The involvement of MORF in paternal mitochondrial transmission is also discussed.

线粒体的严格母系遗传是已知的动物规律,但在双壳类动物的6目中,有100多个物种具有线粒体的双单亲遗传(DUI)。在DUI下,两个不同的性别特异性有丝分裂基因组共存。在海洋和淡水贻贝中,每个有丝分裂基因组都有一个额外的蛋白质编码基因,分别被称为雌性和雄性特异性开放阅读框或forf和morf。相关的FORF和MORF蛋白的功能尚不清楚。在这里,我们发现这些蛋白在两个远亲DUI物种中呈现相似的组织表达模式:MORF仅在雄性性腺中表达,而FORF在海洋贻贝(Mytilus edulis)和淡水贻贝(Venustaconcha ellipsiformis)的两性所有组织中表达。此外,MORF只在繁殖季节表达,而FORF在毛竹中没有明显的季节规律。免疫细胞化学结果显示,这两种蛋白均存在于晚期精子和成熟精子的线粒体和顶体中。我们假设MORF在精子发生中具有关键功能,而FORF在两性中具有更普遍的功能。我们还提出这两种蛋白都可能参与受精过程。MORF参与父系线粒体遗传也进行了讨论。
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引用次数: 0
Mean mares? Habitat features influence female aggression in response to social instability in the feral horse (Equus caballus). 母马意味着什么?生境特征影响了野马(Equus caballus)雌性对社会不稳定的反应。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-15 DOI: 10.1098/rsbl.2024.0494
Cassandra M V Nuñez, James S Adelman

It is unclear how habitat features alter animal responses to social instability. Only by uncovering such interactions can we fully understand the evolutionary drivers and fitness consequences of sociality. We capitalize on a management-induced manipulation of social stability in an island population of free-ranging feral horses (Equus caballus), living across three distinct habitat types. We tested whether female group-changing behaviour (a reliable measure of social instability) affected (i) female-female aggression, (ii) rank within female dominance hierarchies, (iii) stability of female hierarchies (in the groups they joined and/or left), and (iv) how habitat characteristics shaped these responses. Female group-changing behaviour positively predicted aggression from other females, but only when habitat features such as visibility and freshwater distribution were considered. We found no strong association among female group-changing behaviour and the aggression initiated, female rank or the stability of female dominance hierarchies. Our work reveals that animal responses to social instability are nuanced and impacted by the surrounding habitat. A better understanding of these impacts can help elucidate evolutionary drivers of sociality and mitigate unintended effects of management practices.

目前尚不清楚栖息地特征如何改变动物对社会不稳定的反应。只有揭示了这种相互作用,我们才能充分理解社会性的进化驱动因素和适应性后果。我们利用管理诱导的社会稳定操纵,在一个岛屿上自由放养的野马(Equus caballus)种群中,生活在三种不同的栖息地类型中。我们测试了女性群体改变行为(衡量社会不稳定性的可靠指标)是否会影响(i)女性之间的攻击行为,(ii)女性统治等级的等级,(iii)女性等级的稳定性(在她们加入和/或离开的群体中),以及(iv)栖息地特征如何塑造这些反应。雌性群体改变行为积极地预测了其他雌性的攻击行为,但只有在栖息地特征(如能见度和淡水分布)被考虑的情况下。我们发现,女性群体改变行为与发起攻击、女性等级或女性统治等级的稳定性之间没有很强的联系。我们的研究表明,动物对社会不稳定的反应是微妙的,并受到周围栖息地的影响。更好地理解这些影响可以帮助阐明社会性的进化驱动因素,并减轻管理实践的意外影响。
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引用次数: 0
Hidden population turnover of small odontocetes in the northwestern North Pacific during the Holocene. 全新世北太平洋西北部小齿螈的隐蔽种群更替。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-08 DOI: 10.1098/rsbl.2024.0525
Takushi Kishida, Kyohei Sawada, Sakiko Namigata, Takamune Takabatake, Miwa Suzuki, Nanami Takezoe, Takumi Yamamoto, Toshimichi Nakanishi, Hiroyuki Kitagawa

Despite numerous studies on the rise and fall of terrestrial megafauna in the late Quaternary, knowledge about marine megafauna from this period remains limited. In this study, we performed radiocarbon dating and partial mitochondrial DNA sequencing from the skeletal remains of three species of small odontocetes (Pacific white-sided dolphins, Dall's porpoises and harbour porpoises) excavated from prehistoric archaeological sites around the Japanese shore dating back to 8500-1000 years ago (ya). Pacific white-sided dolphins that habituated the eastern coast of Hokkaido around 2000 ya belonged to different maternal groups than those from over 5000 ya and today. Furthermore, the species composition excavated from eastern Hokkaido sites varies between 5000 and 2000 ya. These findings suggest two significant population turnovers of small odontocetes on the east coast of Hokkaido, a transitional zone between the coastal area of East Asia and the offshore North Pacific. Notably, the first turnover, occurring between 5000 and 2000 ya, represents the oldest evidence of local population turnovers of marine megafauna during the late Quaternary.

尽管对晚第四纪陆生巨型动物的兴衰进行了大量研究,但对这一时期的海洋巨型动物的了解仍然有限。在这项研究中,我们对从日本海岸周围的史前考古遗址出土的三种小型齿形动物(太平洋白边海豚、达尔鼠海豚和港湾鼠海豚)的骨骼遗骸进行了放射性碳定年和部分线粒体DNA测序,这些遗址可追溯到8500-1000年前(ya)。2000年前左右生活在北海道东海岸的太平洋白边海豚与5000多年前和今天的白边海豚属于不同的母海豚群。此外,北海道东部遗址出土的物种组成在5000 - 2000年之间变化。这些发现表明,北海道东海岸是东亚沿海地区和北太平洋近海之间的过渡地带,在北海道东海岸有两次重要的小齿螈种群流动。值得注意的是,第一次更替发生在5000年至2000年之间,代表了晚第四纪海洋巨型动物当地种群更替的最古老证据。
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引用次数: 0
Sweating the small stuff: microclimatic exposure and species habitat associations inform climate vulnerability in a grassland songbird community. 汗流浃背的小东西:小气候暴露和物种栖息地的关联通知气候脆弱性在草原鸣禽群落。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-22 DOI: 10.1098/rsbl.2024.0599
Jacy S Bernath-Plaisted, Christine A Ribic, Benjamin Zuckerberg

Assessment of species' vulnerability to climate change has been limited by mismatch between coarse macroclimate data and the fine scales at which species select habitat. Habitat mediates climate conditions, and fine-scale habitat features may permit species to exploit favourable microclimates, but habitat preferences can also constrain their ability to do so. We leveraged fine-resolution models of near-surface temperature and humidity in grasslands to understand how microclimates affect climatic exposure and demographics in a grassland bird community. We asked: (i) Do species select favourable nest-site microclimates? (ii) Do habitat preferences limit the ability of species to access microclimates? (iii) What are the demographic consequences of microclimatic exposure? We found limited evidence that grassland birds select cooler microclimates, which may buffer eggs and nestlings from extreme heat. Instead, many species appeared constrained by vegetation preferences. While facultative generalists displayed flexibility to use denser vegetation that provided buffering from high temperatures (>39°C), most obligate species nested in more exposed microclimates. Nesting success in facultative species was not well explained by microclimate, but success in specialized grassland obligates declined with increasing microclimate temperatures. These findings illustrate how microclimate and habitat use can interact to influence the potential vulnerability of species to future climate change.

由于粗糙的宏观气候数据与物种选择栖息地的精细尺度不匹配,限制了物种对气候变化脆弱性的评估。栖息地调节气候条件,而精细尺度的栖息地特征可能允许物种利用有利的小气候,但栖息地偏好也可能限制它们这样做的能力。我们利用草原近地表温度和湿度的精细分辨率模型来了解小气候如何影响草原鸟类群落的气候暴露和人口统计学。我们的问题是:(i)物种是否会选择有利的筑巢地点小气候?生境偏好是否限制了物种进入小气候的能力?(三)小气候暴露的人口后果是什么?我们发现有限的证据表明,草原鸟类选择较冷的小气候,这可能会缓冲蛋和雏鸟免受极端高温的影响。相反,许多物种似乎受到植被偏好的限制。虽然兼性通才能够灵活地利用浓密的植被来缓冲高温(bb0 - 39°C),但大多数专性物种都在更暴露的小气候中筑巢。小气候不能很好地解释兼性种的筑巢成功率,但随着小气候温度的升高,特化草地的筑巢成功率下降。这些发现说明了小气候和栖息地利用如何相互作用,影响物种对未来气候变化的潜在脆弱性。
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引用次数: 0
DNA and spores from coprolites reveal that colourful truffle-like fungi endemic to New Zealand were consumed by extinct moa (Dinornithiformes). 粪化石的DNA和孢子显示,新西兰特有的色彩鲜艳的松露状真菌是由已灭绝的恐鸟(鸟硫目)食用的。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-15 DOI: 10.1098/rsbl.2024.0440
Alexander P Boast, Jamie R Wood, Jerry Cooper, Nic Bolstridge, George L W Perry, Janet M Wilmshurst

Mycovores (animals that consume fungi) are important for fungal spore dispersal, including ectomycorrhizal (ECM) fungi symbiotic with forest-forming trees. As such, fungi and their symbionts may be impacted by mycovore extinction. New Zealand (NZ) has a diversity of unusual, colourful, endemic sequestrate (truffle-like) fungi, most of which are ECM. As NZ lacks native land mammals (except bats), and sequestrate fungi are typically drab and mammal-dispersed, NZ's sequestrate fungi are hypothesized to be adapted for bird dispersal. However, there is little direct evidence for this hypothesis, as 41% of NZ's native land bird species became extinct since initial human settlement in the thirteenth century. Here, we report ancient DNA and spores from the inside of two coprolites of NZ's extinct, endemic upland moa (Megalapteryx didinus) that reveal consumption and likely dispersal of ECM fungi, including at least one colourful sequestrate species. Contemporary data from NZ show that birds rarely consume fungi and that the introduced mammals preferentially consume exotic fungi. NZ's endemic sequestrate fungi could therefore be dispersal limited compared with fungi that co-evolved with mammalian dispersers. NZ's fungal communities may thus be undergoing a gradual species turnover following avian mycovore extinction and the establishment of mammalian mycovores, potentially affecting forest resilience and facilitating invasion by exotic tree taxa.

真菌动物(吃真菌的动物)对真菌孢子的传播很重要,包括与森林形成树木共生的外生菌根真菌(ECM)。因此,真菌及其共生体可能受到真菌食性动物灭绝的影响。新西兰(NZ)有多种不同寻常的、色彩鲜艳的、地方性的封存(松露样)真菌,其中大多数是ECM。由于新西兰缺乏本土的陆地哺乳动物(蝙蝠除外),并且固存真菌通常是单调的,并且哺乳动物分散,因此新西兰的固存真菌被假设为适合鸟类传播。然而,这一假设几乎没有直接证据,因为自13世纪人类最初定居以来,新西兰41%的本土陆地鸟类已经灭绝。在这里,我们报告了来自新西兰灭绝的,特有的高地恐鸟(Megalapteryx didinus)的两个粪化石内部的古代DNA和孢子,揭示了ECM真菌的消耗和可能的传播,包括至少一种彩色的封存物种。来自新西兰的当代数据表明,鸟类很少食用真菌,而引入的哺乳动物优先食用外来真菌。因此,与与哺乳动物扩散器共同进化的真菌相比,新西兰特有的隔离真菌的扩散能力可能受到限制。因此,新西兰的真菌群落可能正在经历鸟类真菌捕食者灭绝和哺乳动物真菌捕食者建立后的逐渐物种更替,这可能会影响森林的恢复能力,并促进外来树木分类群的入侵。
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引用次数: 0
Dorsoventral comparison of intraspecific variation in the butterfly wing pattern using a convolutional neural network. 用卷积神经网络比较蝴蝶翅膀图案的种内变异。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-15 DOI: 10.1098/rsbl.2024.0446
Kai Amino, Tsubasa Hirakawa, Masaya Yago, Takashi Matsuo

Butterfly wing patterns exhibit notable differences between the dorsal and ventral surfaces, and morphological analyses of them have provided insights into the ecological and behavioural characteristics of wing patterns. Conventional methods for dorsoventral comparisons are constrained by the need for homologous patches or shared features between two surfaces, limiting their applicability across species. We used a convolutional neural network (CNN)-based analysis, which can compare images of the two surfaces without focusing on homologous patches or features, to detect dorsoventral bias in two types of intraspecific variation: sexual dimorphism and mimetic polymorphism. Using specimen images of 29 species, we first showed that the level of sexual dimorphism calculated by CNN-based analysis corresponded well with traditional assessments of sexual dissimilarity, demonstrating the validity of the method. Dorsal biases were widely detected in sexual dimorphism, suggesting that the conventional hypothesis of dorsally biased sexual selection can be supported in a broader range of species. In contrast, mimetic polymorphism showed no such bias, indicating the importance of both surfaces in mimicry. Our study demonstrates the potential versatility of CNN in comparing wing patterns between the two surfaces, while elucidating the relationship between dorsoventrally different selections and dorsoventral biases in intraspecific variations.

蝴蝶翅膀的背面和腹面有明显的差异,对它们的形态分析提供了对翅膀形态的生态学和行为学特征的见解。传统的背腹比较方法受到同源斑块或两个表面之间共享特征的需要的限制,限制了它们在物种间的适用性。我们使用基于卷积神经网络(CNN)的分析,可以比较两个表面的图像,而不关注同源斑块或特征,以检测两种类型的种内变异的背腹侧偏置:性二态性和模仿多态性。利用29个物种的标本图像,我们首先证明了基于cnn的分析计算的性别二态性水平与传统的性别不相似性评估相吻合,证明了该方法的有效性。背侧偏倚在两性二态现象中被广泛发现,这表明传统的背侧偏倚性选择假说可以在更广泛的物种中得到支持。相比之下,拟态多态性没有这种偏见,表明这两个表面在拟态中都很重要。我们的研究证明了CNN在比较两种表面的翅膀图案方面的潜在多功能性,同时阐明了种内变异中背腹侧不同选择和背腹侧偏差之间的关系。
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引用次数: 0
Hovering hawkmoths exploit unsteady circulation to produce aerodynamic force. 悬停的飞蛾利用非定常循环产生气动力。
IF 2.8 2区 生物学 Q2 BIOLOGY Pub Date : 2025-01-01 Epub Date: 2025-01-15 DOI: 10.1098/rsbl.2024.0619
Yun Liu, Biao Li, Deli Zhou

This study employs an integrated approach, combining three-dimensional flow visualization and two-dimensional flow measurement to investigate the underlying unsteady aerodynamic mechanisms of hovering hawkmoths. Using a single vortex ring model, three aerodynamic force components, such as aerodynamic force induced by unsteady circulation, vortex loop size variation and added mass, are estimated within a dimensionless time (normalized by one wing beat cycle) range of 0.418 < T* < 0.455, where both the vortex loop circulation and loop size data are available. The force analysis reveals that the unsteady circulation-induced aerodynamic force dominates the overall force production and contributes 67% of the total force while the vortex loop size variation and added mass effect-induced aerodynamic forces only count for 25% and 8%, respectively. These findings suggest the hawkmoth primarily relies on unsteady circulation to generate aerodynamic forces.

本研究采用三维流动可视化与二维流动测量相结合的方法,对悬停飞蛾的非定常气动机理进行了研究。利用单个涡环模型,在无量纲时间(按一个翼拍周期归一化)0.418 < T* < 0.455范围内,同时获得涡环环流和涡环尺寸数据,估算了非定常环流诱导的气动力、涡环尺寸变化和增加的质量三个气动力分量。力分析表明,非定常循环诱导的气动力在整个力产生中占主导地位,占总力的67%,而涡环尺寸变化和附加质量效应诱导的气动力分别只占25%和8%。这些发现表明,飞蛾主要依靠非定常循环来产生气动力。
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引用次数: 0
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