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Directed proton transfer from Fo to F1 extends the multifaceted proton functions in ATP synthase 质子从Fo到F1的定向转移扩展了ATP合酶的多重质子功能
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-21 DOI: 10.1007/s12551-023-01132-y
Semen V. Nesterov, Lev S. Yaguzhinsky
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引用次数: 1
Biophysics education section and computational training discussion at VII Congress of Russian Biophysicists 第七届俄罗斯生物物理学家大会生物物理学教育节和计算训练讨论
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-19 DOI: 10.1007/s12551-023-01147-5
Vasilisa A. Turkina, Nina G. Orlova, Yuriy L. Orlov
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引用次数: 1
About work of a young member of the Radiobiological Society of the Russian Academy of Sciences 关于俄罗斯科学院放射生物学学会的一名年轻成员的工作
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-18 DOI: 10.1007/s12551-023-01123-z
Leonid A. Romodin
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引用次数: 1
Bioinformatics tools for the sequence complexity estimates 用于序列复杂性估计的生物信息学工具
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-15 DOI: 10.1007/s12551-023-01140-y
Yuriy L. Orlov, Nina G. Orlova
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引用次数: 1
Phthalocyanine aggregates in the photodynamic therapy: dogmas, controversies, and future prospects 光动力疗法中的酞菁聚集体:教条、争议和未来展望
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-15 DOI: 10.1007/s12551-023-01129-7
Dmitry A. Bunin, Alexander G. Martynov, Daniil A. Gvozdev, Yulia G. Gorbunova
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引用次数: 1
Mechanisms of UV-induced human lymphocyte apoptosis 紫外线诱导人淋巴细胞凋亡的机制
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-14 DOI: 10.1007/s12551-023-01142-w
M.A. Nakvasina, M.G. Holyavka, V.G. Artyukhov, M.S. Radchenko, O.V. Lidokhova
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引用次数: 1
Review on brain-computer interface technologies in healthcare 医疗卫生领域脑机接口技术研究进展
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-14 DOI: 10.1007/s12551-023-01138-6
Evelyn Karikari, Konstantin A. Koshechkin
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引用次数: 1
The critical role of mitochondrial lipid peroxidation in ferroptosis: insights from recent studies 线粒体脂质过氧化在铁下垂中的关键作用:来自最近研究的见解
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-13 DOI: 10.1007/s12551-023-01126-w
Konstantin G. Lyamzaev, Alisa A. Panteleeva, Ruben A. Simonyan, Armine V. Avetisyan, Boris V. Chernyak
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引用次数: 1
The multi-faceted roles of R2TP complex span across regulation of gene expression, translation, and protein functional assembly R2TP复合体在基因表达、翻译和蛋白质功能组装方面发挥着多方面的作用
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-12 DOI: 10.1007/s12551-023-01127-9
Sifiso Duncan Luthuli, Addmore Shonhai
Abstract Macromolecular complexes play essential roles in various cellular processes. The assembly of macromolecular assemblies within the cell must overcome barriers imposed by a crowded cellular environment which is characterized by an estimated concentration of biological macromolecules amounting to 100–450 g/L that take up approximately 5–40% of the cytoplasmic volume. The formation of the macromolecular assemblies is facilitated by molecular chaperones in cooperation with their co-chaperones. The R2TP protein complex has emerged as a co-chaperone of Hsp90 that plays an important role in macromolecular assembly. The R2TP complex is composed of a heterodimer of RPAP3:P1H1DI that is in turn complexed to members of the ATPase associated with diverse cellular activities (AAA +), RUVBL1 and RUVBL2 (R1 and R2) families. What makes the R2TP co-chaperone complex particularly important is that it is involved in a wide variety of cellular processes including gene expression, translation, co-translational complex assembly, and posttranslational protein complex formation. The functional versatility of the R2TP co-chaperone complex makes it central to cellular development; hence, it is implicated in various human diseases. In addition, their roles in the development of infectious disease agents has become of interest. In the current review, we discuss the roles of these proteins as co-chaperones regulating Hsp90 and its partnership with Hsp70. Furthermore, we highlight the structure–function features of the individual proteins within the R2TP complex and describe their roles in various cellular processes.
大分子复合物在各种细胞过程中起着重要作用。细胞内大分子组件的组装必须克服拥挤的细胞环境所施加的障碍,其特征是生物大分子的估计浓度达100-450克/升,约占细胞质体积的5-40%。分子伴侣和它们的共同伴侣促进了大分子组装的形成。R2TP蛋白复合物作为Hsp90的合作伴侣出现,在大分子组装中起重要作用。R2TP复合体由RPAP3的异源二聚体:P1H1DI组成,该复合体又与与多种细胞活性(AAA +), RUVBL1和RUVBL2 (R1和R2)家族相关的atp酶成员络合。R2TP共伴侣复合物之所以特别重要,是因为它参与了多种细胞过程,包括基因表达、翻译、共翻译复合物组装和翻译后蛋白质复合物的形成。R2TP共伴侣复合物的多功能性使其成为细胞发育的核心;因此,它与各种人类疾病有关。此外,它们在传染病病原体发展中的作用也引起了人们的兴趣。在这篇综述中,我们讨论了这些蛋白作为调控Hsp90及其与Hsp70的合作伙伴的作用。此外,我们强调了R2TP复合体中单个蛋白质的结构功能特征,并描述了它们在各种细胞过程中的作用。
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引用次数: 0
Determination of DNA architecture of bacteria under various types of stress, methodological approaches, problems, and solutions. 在各种压力下细菌DNA结构的测定、方法、问题和解决方案
IF 4.9 Q1 BIOPHYSICS Pub Date : 2023-09-08 eCollection Date: 2023-10-01 DOI: 10.1007/s12551-023-01122-0
Yu F Krupyanskii

Actively growing cells maintain a dynamic, far from equilibrium order through metabolism. Under starvation stress or under stress of exposure to the analog of the anabiosis autoinducer (4-hexylresorcinol), cells go into a dormant state (almost complete lack of metabolism) or even into a mummified state. In a dormant state, cells are forced to use the physical mechanisms of DNA protection. The architecture of DNA in the dormant and mummified state of cells was studied by x-ray diffraction of synchrotron radiation and transmission electron microscopy (TEM). Diffraction experiments indicate the appearance of an ordered organization of DNA. TEM made it possible to visualize the type of DNA ordering. Intracellular nanocrystalline, liquid-crystalline, and folded nucleosome-like structures of DNA have been found. The structure of DNA within a cell in an anabiotic dormant state and dormant state (starvation stress) coincides (forms nanocrystalline structures). Data suggest the universality of DNA condensation by a protein Dps for a dormant state, regardless of the type of stress. The mummified state is very different in structure from the dormant state (has no ordering within a cell). It turned out that it is possible to visualize DNA conformation in toroidal and liquid crystal structures in which there is either no or a very small amount of the Dps protein. Observation of the DNA conformation in nanocrystals and folded nucleosome-like structures so far has been inconclusive. The methodological advances described will facilitate high-resolution visualization of the DNA conformation in the near future.

活跃生长的细胞通过代谢维持一个动态的、远离平衡的秩序。在饥饿压力下或暴露于类似于复苏自诱导剂(4-己基间苯二酚)的压力下,细胞进入休眠状态(几乎完全缺乏代谢),甚至进入木乃伊状态。在休眠状态下,细胞被迫使用DNA保护的物理机制。采用同步辐射x射线衍射和透射电子显微镜(TEM)研究了细胞休眠和木乃伊状态下DNA的结构。衍射实验表明DNA的结构是有序的。透射电镜可以可视化DNA排序的类型。细胞内的纳米晶、液晶和折叠的核小体状DNA结构已被发现。细胞内DNA的结构在厌氧休眠状态和休眠状态(饥饿应激)是一致的(形成纳米晶体结构)。数据表明,无论应激类型如何,DNA在休眠状态下由蛋白质Dps凝结的普遍性。木乃伊状态在结构上与休眠状态非常不同(细胞内没有秩序)。结果证明,在没有或极少量Dps蛋白的环状和液晶结构中可视化DNA构象是可能的。到目前为止,对纳米晶体和折叠核小体样结构中的DNA构象的观察还没有定论。在不久的将来,所描述的方法进步将促进DNA构象的高分辨率可视化。
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引用次数: 0
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Biophysical reviews
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