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An Innovative Physical Therapy Intervention for Chronic Pain Management and Opioid Reduction Among People Living with HIV. 一个创新的物理治疗干预慢性疼痛管理和阿片类药物减少艾滋病毒感染者。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-12-08 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0006
Sara D Pullen, Carlos Del Rio, Daniel Brandon, Ann Colonna, Meredith Denton, Matthew Ina, Grace Lancaster, Anne-Grace Schmidtke, Vincent C Marconi

Chronic pain management has become a treatment priority for people living with HIV (PLH), and PLH may be at increased risk for opioid addiction. Physical therapy (PT) has been shown to be effective as a nonpharmacological method of chronic pain management; however, there is a gap in research examining the role of PT for chronic pain, especially as it relates to opioid reduction, in this patient population. This retrospective study evaluated pain level and opioid use before and after PT intervention among HIV-positive adults with chronic pain on chronic opioid therapy (n = 22). The study was conducted at a multidisciplinary AIDS clinic in Atlanta, GA. Outcome measures were self-reported pain on the numerical rating scale (0-10) and morphine milligram equivalents (MMEs), which measure opioid use. A majority of patients (77%) demonstrated a decrease in pain by the conclusion of the study period; however, only 18.2% of patients reported decreased pain as well as a decrease in MMEs. The most common PT treatments used among the patients with a decrease in pain and/or opioid use included home exercise programs, manual therapy, and self-pain management education. Eighty percent of the participants who did not decrease opioid use reported a decrease or elimination of pain by the end of the PT intervention. This reflects the need for careful consideration of the complexity of opioid use and addiction, and the importance of a multidisciplinary team to best serve the needs of PLH aiming to decrease chronic pain and opioid use.

慢性疼痛管理已成为艾滋病毒感染者(PLH)的治疗重点,而PLH可能会增加阿片类药物成瘾的风险。物理治疗(PT)已被证明是有效的非药物方法慢性疼痛管理;然而,在这一患者群体中,关于PT治疗慢性疼痛的作用,特别是与阿片类药物减少有关的作用的研究存在空白。这项回顾性研究评估了接受慢性阿片类药物治疗的艾滋病毒阳性成人慢性疼痛患者在PT干预前后的疼痛水平和阿片类药物使用情况(n = 22)。这项研究是在乔治亚州亚特兰大的一家多学科艾滋病诊所进行的。结果测量是自我报告的数值评定量表(0-10)和吗啡毫克当量(MMEs),测量阿片类药物的使用。大多数患者(77%)在研究结束时表现出疼痛减轻;然而,只有18.2%的患者报告疼痛减轻和MMEs减少。在疼痛和/或阿片类药物使用减少的患者中,最常见的PT治疗包括家庭锻炼计划、手工治疗和自我疼痛管理教育。80%没有减少阿片类药物使用的参与者报告在PT干预结束时疼痛减轻或消除。这反映了需要仔细考虑阿片类药物使用和成瘾的复杂性,以及一个多学科团队的重要性,以最好地满足PLH的需求,旨在减少慢性疼痛和阿片类药物的使用。
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引用次数: 3
Characterization of Laminins in Healthy Human Aortic Valves and a Modified Decellularized Rat Scaffold. 健康人主动脉瓣和改良脱细胞大鼠支架中层粘连蛋白的表征。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-12-07 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0018
Carl Granath, Hunter Noren, Hanna Björck, Nancy Simon, Kim Olesen, Sergey Rodin, Karl-Henrik Grinnemo, Cecilia Österholm

Aortic valve stenosis is one of the most common cardiovascular diseases in western countries and can only be treated by replacement with a prosthetic valve. Tissue engineering is an emerging and promising treatment option, but in-depth knowledge about the microstructure of native heart valves is lacking, making the development of tissue-engineered heart valves challenging. Specifically, the basement membrane (BM) of heart valves remains incompletely characterized, and decellularization protocols that preserve BM components are necessary to advance the field. This study aims to characterize laminin isoforms expressed in healthy human aortic valves and establish a small animal decellularized aortic valve scaffold for future studies of the BM in tissue engineering. Laminin isoforms were assessed by immunohistochemistry with antibodies specific for individual α, β, and γ chains. The results indicated that LN-411, LN-421, LN-511, and LN-521 are expressed in human aortic valves (n = 3), forming a continuous monolayer in the endothelial BM, whereas sparsely found in the interstitium. Similar results were seen in rat aortic valves (n = 3). Retention of laminin and other BM components, concomitantly with effective removal of cells and residual DNA, was achieved through 3 h exposure to 1% sodium dodecyl sulfate and 30 min exposure to 1% Triton X-100, followed by nuclease processing in rat aortic valves (n = 3). Our results provide crucial data on the microenvironment of valvular cells relevant for research in both tissue engineering and heart valve biology. We also describe a decellularized rat aortic valve scaffold useful for mechanistic studies on the role of the BM in heart valve regeneration.

主动脉瓣狭窄是西方国家最常见的心血管疾病之一,只能通过人工瓣膜置换术来治疗。组织工程是一种新兴且有前途的治疗选择,但缺乏对天然心脏瓣膜微观结构的深入了解,这使得组织工程心脏瓣膜的开发具有挑战性。具体来说,心脏瓣膜的基底膜(BM)仍然没有完全表征,保留基底膜成分的脱细胞方案对于推进该领域是必要的。本研究旨在表征健康人主动脉瓣中表达的层粘连蛋白亚型,并建立一个小动物脱细胞主动脉瓣支架,为今后组织工程中主动脉瓣支架的研究奠定基础。层粘连蛋白同种异构体通过免疫组织化学方法对单个α、β和γ链特异性抗体进行评估。结果表明,LN-411、LN-421、LN-511和LN-521在人主动脉瓣中表达(n = 3),在内皮细胞间质中形成连续的单层,而在间质中稀疏存在。在大鼠主动脉瓣中也出现了类似的结果(n = 3)。通过暴露于1%十二烷基硫酸钠3小时,暴露于1% Triton X-100 30分钟,然后在大鼠主动脉瓣中进行核酸酶处理,可以获得层粘连蛋白和其他BM成分的保留,同时有效去除细胞和残余DNA (n = 3)。我们的研究结果为组织工程和心脏瓣膜生物学研究提供了有关瓣膜细胞微环境的重要数据。我们还描述了一个脱细胞的大鼠主动脉瓣支架,用于心脏瓣膜再生中BM作用的机制研究。
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引用次数: 3
Why Do We Need Serological Tests for Severe Acute Respiratory Syndrome Coronavirus-2 Diagnosis? 为什么我们需要血清学检测来诊断严重急性呼吸综合征冠状病毒2 ?
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-12-02 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0026
Bouchra Ghazi, Adil Elghanmi

Considering the COVID-19 emerging and rapidly evolving situation associated with increased levels of mortality and infectivity risks, the detection and identification of new tests in a fast, safe, and accurate measures would have a high impact regarding prompt clinical and epidemiological management decisions. The combination of real-time polymerase chain reaction and the immunoglobulin class M-immunoglobulin class G antibody serology testing can be a powerful strategy for more accurate severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection diagnosis with less false results slipping through the cracks. The following viewpoint is describing the immunological response to SARS-Cov-2 infection and its implication in the selection of the appropriate diagnosis tools.

考虑到COVID-19正在出现并迅速演变的情况,与死亡率和感染风险水平上升有关,以快速、安全和准确的措施发现和确定新的检测方法将对及时做出临床和流行病学管理决策产生重大影响。实时聚合酶链反应与免疫球蛋白m类免疫球蛋白G类抗体血清学检测相结合,可以成为更准确诊断严重急性呼吸综合征冠状病毒2 (SARS-CoV-2)感染的有力策略,减少错误结果的出现。以下观点描述了对SARS-Cov-2感染的免疫反应及其在选择适当诊断工具中的意义。
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引用次数: 0
Immunotherapy for Infarcts: In Vivo Postinfarction Macrophage Modulation Using Intramyocardial Microparticle Delivery of Map4k4 Small Interfering RNA. 梗死的免疫治疗:使用心肌内微颗粒递送Map4k4小干扰RNA来调节体内梗死后巨噬细胞。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-12-02 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0037
Jun Luo, Matthew S Weaver, Timothy P Fitzgibbons, Myriam Aouadi, Michael P Czech, Margaret D Allen

The myeloid cells infiltrating the heart early after acute myocardial infarction elaborate a secretome that largely orchestrates subsequent ventricular wall repair. Regulating this innate immune response could be a means to improve infarct healing. To pilot this concept, we utilized (β1,3-d-) glucan-encapsulated small interfering RNA (siRNA)-containing particles (GeRPs), targeting mononuclear phagocytes, delivered to mice as a one-time intramyocardial injection immediately after acute infarction. Findings demonstrated that cardiac macrophages phagocytosed GeRPs in vivo and had little systemic dissemination, thus providing a means to deliver local therapeutics. Acute infarcts were then injected in vivo with phosphate-buffered saline (PBS; vehicle) or GeRPs loaded with siRNA to Map4k4, and excised hearts were examined at 3 and 7 days by quantitative polymerase chain reaction, flow cytometry, and histology. Compared with infarcted PBS-treated hearts, hearts with intrainfarct injections of siRNA-loaded GeRPs exhibited 69-89% reductions in transcripts for Map4k4 (mitogen-activated protein kinase kinase kinase kinase 4), interleukin (IL)-1β, and tumor necrosis factor α at 3 days. Expression of other factors relevant to matrix remodeling-monocyte chemoattractant protein-1 (MCP-1), matrix metalloproteinases, hyaluronan synthases, matricellular proteins, and profibrotic factors transforming growth factor beta (TGF-β), and connective tissue growth factor (CTGF)-were also decreased. Most effects peaked at 3 days, but, in some instances (Map4k4, IL-1β, TGF-β, CTGF, versican, and periostin), suppression persisted to 7 days. Thus, direct intramyocardial GeRP injection could serve as a novel and clinically translatable platform for in vivo RNA delivery to intracardiac macrophages for local and selective immunomodulation of the infarct microenvironment.

急性心肌梗死后早期骨髓细胞浸润心脏,形成一个分泌组,在很大程度上协调了随后的心室壁修复。调节这种先天免疫反应可能是改善梗死愈合的一种手段。为了试验这一概念,我们利用(β1,3-d-)葡聚糖封装的含小干扰RNA (siRNA)颗粒(GeRPs)靶向单核吞噬细胞,在急性梗死后立即一次性注射给小鼠心内。研究结果表明,心脏巨噬细胞在体内吞噬GeRPs,并且几乎没有全身传播,从而提供了一种传递局部治疗的手段。急性梗死患者体内注射磷酸盐缓冲盐水(PBS;在第3天和第7天,通过定量聚合酶链反应、流式细胞术和组织学检查切除的心脏。与pbs处理的梗死心脏相比,在心肌梗死后3天内注射sirna负载的GeRPs后,Map4k4(丝裂原活化蛋白激酶激酶激酶激酶激酶激酶4)、白细胞介素(IL)-1β和肿瘤坏死因子α的转录降低了69-89%。其他与基质重塑相关的因子——单核细胞趋化蛋白-1 (MCP-1)、基质金属蛋白酶、透明质酸合成酶、基质细胞蛋白、促纤维化因子转化生长因子β (TGF-β)和结缔组织生长因子(CTGF)的表达也有所下降。大多数效果在3天达到顶峰,但在某些情况下(Map4k4、IL-1β、TGF-β、CTGF、versican和periostin),抑制持续到7天。因此,直接在心内注射GeRP可以作为一种新的、临床可翻译的平台,在体内将RNA递送到心内巨噬细胞,以局部和选择性地调节梗死微环境。
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引用次数: 2
Comparative Evaluation of the Effects of Consumption of Colombian Agraz (Vaccinium meridionale Swartz) on Insulin Resistance, Antioxidant Capacity, and Markers of Oxidation and Inflammation, Between Men and Women with Metabolic Syndrome. 食用哥伦比亚阿格拉兹对代谢综合征男性和女性胰岛素抵抗、抗氧化能力、氧化和炎症标志物影响的比较评价
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-11-30 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0053
Yeisson Galvis-Pérez, Catalina Marín-Echeverri, Claudia Patricia Franco Escobar, Juan C Aristizábal, Maria-Luz Fernández, Jacqueline Barona-Acevedo

The metabolic syndrome (MS) is a constellation of related factors that increases the risk of developing cardiovascular diseases. Vaccinium meridionale Swartz contains polyphenols that could modulate some components of MS. Epidemiological and intervention studies have shown differences between men and women in MS components and antioxidant capacity. The objective of this study is to compare between men and women with MS the effects of agraz consumption on insulin resistance, antioxidant capacity, and markers of oxidation and inflammation. Men and women diagnosed with MS according to the Adult Treatment Panel III criteria were recruited in a double-blind, crossover study of 12 weeks. Participants were assigned to consume agraz nectar or placebo over 4 weeks. After 4 weeks of washout, they were switched to the alternative treatment. At the end of each period, the components of the MS, insulin resistance, antioxidant capacity, and some oxidative (oxidized low-density lipoprotein [oxLDL]; thiobarbituric acid reactive substances) and inflammatory (high-sensitive C-reactive protein [hs-CRP]) markers were evaluated. After consuming agraz, there was a tendency to increase the levels of antioxidants and to reduce the levels of hs-CRP in both genders. In addition, women who increased their serum phenols after consuming agraz had a significant reduction in insulin resistance, which was different from the results in men. Regarding men, those who increased their serum antioxidant capacity after consuming agraz had a better effect on the reduction of oxLDL levels that was significant compared to women. There are important differences between genders in the effects of agraz consumption in adults with MS.

代谢综合征(MS)是增加心血管疾病发生风险的一系列相关因素。流行病学和干预研究表明,男性和女性在质谱成分和抗氧化能力方面存在差异。本研究的目的是比较男性和女性多发性硬化症患者食用燕麦对胰岛素抵抗、抗氧化能力、氧化和炎症标志物的影响。根据成人治疗组III标准诊断为MS的男性和女性被招募参加为期12周的双盲交叉研究。参与者被分配在4周内饮用agraz花蜜或安慰剂。在4周的洗脱期后,他们被切换到替代治疗。在每个周期结束时,MS的组成,胰岛素抵抗,抗氧化能力,和一些氧化(氧化低密度脂蛋白[oxLDL];硫代巴比妥酸反应物质)和炎症(高敏c反应蛋白[hs-CRP])标志物。在食用agraz后,男女都有增加抗氧化剂水平和降低hs-CRP水平的趋势。此外,食用agraz后血清酚含量增加的女性胰岛素抵抗显著降低,这与男性的结果不同。对于男性来说,那些在食用agraz后提高血清抗氧化能力的人,与女性相比,在降低oxLDL水平方面有更好的效果。在成人多发性硬化症患者中,食用燕麦的效果在性别之间存在重要差异。
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引用次数: 3
Biotin Interference in Point of Care HIV Immunoassay. 生物素干扰护理点HIV免疫测定。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-11-24 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0038
Mohan Kumar Haleyur Giri Setty, Sherwin Lee, Julia Lathrop, Indira K Hewlett

The use of high concentrations of biotin as a dietary supplement to improve hair, skin, and nail quality has increased in the United States over the past few years. High concentrations of biotin have been shown to interfere with some diagnostic assays that use streptavidin-biotin interactions as one of the steps in the assay. The objective of this report is to evaluate potential biotin interference on the analytical and clinical sensitivity of a point of care (POC) antigen-antibody combo HIV-1 assay. We spiked biotin at concentrations ranging from 12.5 to 400 ng/mL into serum and plasma containing HIV-1 subtype B p24 antigen derived from culture supernatant. The p24 antigen was present in the matrices at 30 pg/mL. Fifty microliters of each sample was applied to Alere Determine HIV-1/2 Ag/Ab combo assay strips in duplicate and results were read by eye after 20 to 30 min. Biotin interfered with detection of HIV-1 p24 in serum and plasma. HIV-1 p24 was not detected at 30 pg/mL p24 when biotin was present at 200 ng/mL concentration. Our study demonstrated that elevated levels of biotin in samples may interfere with POC assays. It is important to consider biotin supplements as potential sources of falsely increased or decreased test results, especially in cases wherein supplementation cannot be ruled out.

在过去的几年中,美国越来越多地使用高浓度生物素作为膳食补充剂来改善头发、皮肤和指甲的质量。高浓度的生物素已被证明会干扰一些使用链霉亲和素-生物素相互作用作为分析步骤之一的诊断分析。本报告的目的是评估潜在的生物素干扰对护理点(POC)抗原-抗体组合HIV-1检测的分析和临床敏感性。我们将生物素浓度从12.5到400 ng/mL加入到含有HIV-1亚型B p24抗原的血清和血浆中,这些抗原来源于培养上清。p24抗原以30 pg/mL存在于基质中。每种样品各取50微升,一式两份加入Alere Determine HIV-1/2 Ag/Ab组合试验条,20 ~ 30分钟后用肉眼读取结果。生物素干扰血清和血浆中HIV-1 p24的检测。当生物素浓度为200 ng/mL时,HIV-1 p24在30 pg/mL时未被检测到。我们的研究表明,样品中生物素水平升高可能会干扰POC测定。重要的是要考虑生物素补充剂作为错误增加或减少测试结果的潜在来源,特别是在补充不能排除的情况下。
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引用次数: 3
Antioxidant Activity and Cytotoxicity of Medicago sativa L. Seeds and Herb Extract on Skin Cells. 紫花苜蓿种子及提取物对皮肤细胞的抗氧化活性及细胞毒性。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-10-23 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0015
Martyna Zagórska-Dziok, Aleksandra Ziemlewska, Zofia Nizioł-Łukaszewska, Tomasz Bujak

In response to the constantly growing demand for high quality cosmetics we observe an increasing interest in products containing natural plant extracts. This article attempts to assess the antioxidant and cytotoxic properties of extracts from alfalfa herb and seeds (Medicago sativa L.). These extracts were obtained using ultrasound-assisted extraction method. The research was carried out on two cell lines: fibroblasts and keratinocytes. The obtained results show that the examined extracts from M. sativa L. are a source of valuable biologically active agents. Both extracts were characterized by high content of flavonoids and phenolic compounds. Evaluation of antioxidant properties of extracts using DPPH• radical indicated that the alfalfa extracts can efficiently scavenge free radicals. The results of the conducted experiments demonstrated that the M. sativa L. extracts do not only have an inhibitory effect on free radicals existing in the external environment of the cell, but also have the ability to reduce the intracellular reactive oxygen species level, which may contribute to the reduction of oxidative stress inside the cells. Studies performed using cell lines indicated that the tested extracts increase the proliferation and metabolism of skin cells in vitro. The high antioxidant capacity of M. sativa L. extracts may indicate its potential use as a valuable ingredient in the cosmetics and pharmaceutical industries.

随着人们对高品质化妆品的需求不断增长,我们发现人们对含有天然植物提取物的产品越来越感兴趣。本文研究了紫花苜蓿(Medicago sativa L.)草本植物及其种子提取物的抗氧化和细胞毒性。这些提取物采用超声辅助提取法获得。这项研究是在两种细胞系上进行的:成纤维细胞和角化细胞。结果表明,所研究的苜蓿提取物是一种有价值的生物活性物质。两种提取物均具有黄酮和酚类化合物含量高的特点。DPPH•自由基对提取物抗氧化性能的评价表明,紫花苜蓿提取物能有效清除自由基。实验结果表明,sativa L.提取物不仅对存在于细胞外环境的自由基有抑制作用,而且具有降低细胞内活性氧水平的能力,这可能有助于减少细胞内的氧化应激。使用细胞系进行的研究表明,所测试的提取物可以增加体外皮肤细胞的增殖和代谢。sativa L.提取物的高抗氧化能力可能表明其在化妆品和制药工业中的潜在应用价值。
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引用次数: 16
Two-Plasmid Packaging System for Recombinant Adeno-Associated Virus. 重组腺相关病毒的双质粒包装系统
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-10-16 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0031
Qiushi Tang, Allison M Keeler, Songbo Zhang, Qin Su, Zhuoyao Lyu, Yangfan Cheng, Guangping Gao, Terence R Flotte

A number of packaging systems are available for production of recombinant adeno-associated virus vectors (rAAVs). Among these, the use of a two-plasmid cotransfection system, in which Rep and Cap genes and Ad helper genes are on the same plasmid, has not been frequently employed for good manufacturing practices (GMP) production, even though it presents some practical advantages over the common three-plasmid (triple) transfection method. To confirm and expand the utility of the two-plasmid system, we generated GMP-compatible versions of this system and used those package reporter genes in multiple capsid variants in direct comparison with triple transfection. Vector yields, purity, and empty-to-full ratios were comparable between double and triple transfection methods for all capsid variants tested. We performed an in vivo side-by-side comparison of double and triple transfection vectors following both intravenous injection and intramuscular injection in mice. Expression and transduction were evaluated in muscle and liver 4 weeks after injection. Additional studies of bioactivity were conducted in vivo using packaged vectors carrying a variety of cargos, including the therapeutic transgene, microRNA, and single- or double-stranded vector. Results showed that cargos packaged using double transfection were equivalently bioactive to those packaged using a triple transfection system. In conclusion, these data suggest the utility of midrange (1E12-1E16) GMP-compatible packaging of adeno-associated virus (AAV) vectors for several AAV capsids.

目前有多种包装系统可用于生产重组腺相关病毒载体(rAAV)。其中,双质粒共转染系统(Rep 基因、Cap 基因和 Ad 辅助基因在同一质粒上)与常见的三质粒(三重)转染法相比具有一些实际优势,但在良好生产规范(GMP)生产中还没有被经常采用。为了证实并扩大双质粒系统的实用性,我们生成了该系统的 GMP 兼容版本,并将其用于包装报告基因的多种囊膜变体,与三重转染进行直接比较。在测试的所有囊膜变体中,双质粒转染和三质粒转染方法的载体产量、纯度和空满比都相当。我们对小鼠静脉注射和肌肉注射双转染载体和三转染载体进行了体内并排比较。注射 4 周后,对肌肉和肝脏中的表达和转导情况进行了评估。此外,还使用携带各种载体(包括治疗性转基因、microRNA、单链或双链载体)的包装载体在体内进行了生物活性研究。结果表明,使用双转染包装的载体与使用三转染系统包装的载体具有同等的生物活性。总之,这些数据表明,中档(1E12-1E16)GMP兼容的腺相关病毒(AAV)载体包装适用于多种 AAV 外壳。
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引用次数: 0
Genetic and Functional Characterization of HIV-1 Vpu from HIV-1-Infected North Indian Population. 北印度HIV-1感染人群HIV-1 Vpu的遗传和功能特征
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-10-13 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0023
Jyotsna Singh, Monika Pandey, Vishnampettai G Ramachandran, Akhil C Banerjea

Acquired immunodeficiency syndrome is a pandemic disease due to increased variability in causative agent in global distribution; it is attributed to various complications in developing the vaccine, namely, error-prone reverse transcriptase, rapid replication, and high recombination rate. Vpu downmodulates CD4 in infected cells, and it targets the newly synthesized CD4 molecules from the endoplasmic reticulum. The aim of this study was to identify the level of genetic changes in the Vpu gene from HIV-1-infected North Indian individuals and determine the functional relevance with respect to the CD4 downregulation potential of this protein. Genomic DNA was isolated from peripheral blood mononuclear cells, and the Vpu gene was polymerase chain reaction amplified with specific primers followed by cloning, sequencing, and sequence analyses using bioinformatic tools for predicting HIV-1 subtypes, recombination events, conservation of domains, and phosphorylation sites. Among all Vpu variants, three of the variants having serine substitution (serine-52 and serine-56 conversion to isoleucine; S52I and S56I) had lost their functional β-TrcP binding motif. However, the specific determinants for CD4 (V20, W22, S23) and BST-2 (A11, A15, I17, and A19) binding remained highly conserved. The data obtained with Vpu mutants recommend that the serine residue substitutions in cytoplasmic domain distress the CD4 downregulation activity of Vpu. These events are likely to have implications for viral pathogenesis and vaccine formulations.

获得性免疫缺陷综合征是由于全球分布的病原体变异性增加而引起的大流行性疾病;这是由于疫苗开发过程中的各种并发症,即容易出错的逆转录酶、快速复制和高重组率。Vpu下调感染细胞中的CD4,并靶向内质网新合成的CD4分子。本研究的目的是确定hiv -1感染的北印度个体Vpu基因的遗传变化水平,并确定该蛋白与CD4下调潜能的功能相关性。从外周血单个核细胞中分离基因组DNA,用特异性引物扩增Vpu基因,然后用生物信息学工具进行克隆、测序和序列分析,预测HIV-1亚型、重组事件、结构域保护和磷酸化位点。在所有Vpu变异体中,有三个变异体具有丝氨酸取代作用(丝氨酸-52和丝氨酸-56转化为异亮氨酸;S52I和S56I)失去了功能β-TrcP结合基序。然而,CD4 (V20, W22, S23)和BST-2 (A11, A15, I17和A19)结合的特异性决定因素仍然高度保守。从Vpu突变体获得的数据表明,细胞质区域的丝氨酸残基替换抑制了Vpu的CD4下调活性。这些事件可能对病毒发病机制和疫苗配方产生影响。
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引用次数: 1
Optimization of Sorghum Kafirin Extraction Conditions and Identification of Potential Bioactive Peptides. 优化高粱卡菲林提取条件并鉴定潜在的生物活性肽。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-09-01 eCollection Date: 2020-01-01 DOI: 10.1089/biores.2020.0013
Tania P Castro-Jácome, Luz E Alcántara-Quintana, Erik G Tovar-Pérez

The interest in extracting kafirins (KAF), the main storage protein from sorghum grain has recently increased due to its gluten-free content and the significant scientific evidence showing the health benefits of the bioactive peptides from cereal grains in human diets. The objectives were to obtain the highest percentage of KAF extraction using amyloglucosidase as pretreatment to increase the extraction yield and predict the bioactive peptides in the KAF. In this study, pretreatments with amyloglucosidase increased the extraction yield of KAF compared with extraction methods using only ethanol and sodium metabisulfite. Two protein fragment sequences were identified from KAF extract and were evaluated for potential bioactive peptide using the BIOPEP-UWM database, which suggest that KAF proteins from white sorghum may be considered as good precursors of dipeptidyl peptidase-inhibitor, angiotensin-converting enzyme inhibitor, antioxidant and hypotensive peptides following chymotrypsin, thermolysin, and subtilisin and their combination. Average scores aligned using PeptideRanker confirmed KAF proteins' potential sources of bioactive peptides with over 5 peptides scored over 0.8. In addition, 31 unexplored peptide sequences that could have biological activity were identified. Our results suggest that KAF can be used in the peptide productions with potential biological activity and beyond.

由于高粱谷物不含麸质,而且大量科学证据表明谷物中的生物活性肽对人类饮食健康有益,因此从高粱谷物中提取主要贮藏蛋白卡菲麟(KAF)的兴趣近来日益高涨。本研究的目标是利用淀粉葡萄糖苷酶作为预处理,获得最高的 KAF 提取率,以提高提取率并预测 KAF 中的生物活性肽。在这项研究中,与仅使用乙醇和焦亚硫酸钠的提取方法相比,使用淀粉葡萄糖苷酶进行预处理可提高 KAF 的提取率。从 KAF 提取物中鉴定出了两个蛋白质片段序列,并利用 BIOPEP-UWM 数据库对其潜在的生物活性肽进行了评估,结果表明,白高粱中的 KAF 蛋白可被视为继糜蛋白酶、热溶酶和枯草酶及其组合之后的二肽基肽酶抑制剂、血管紧张素转换酶抑制剂、抗氧化剂和降血压肽的良好前体。使用 PeptideRanker 排序的平均得分证实了 KAF 蛋白是生物活性肽的潜在来源,其中超过 5 种肽的得分超过了 0.8。此外,还发现了 31 个可能具有生物活性的未开发肽序列。我们的研究结果表明,KAF 可用于生产具有潜在生物活性的多肽,甚至更多。
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