首页 > 最新文献

Biology Open最新文献

英文 中文
Local differences in robustness to ocean acidification. 各地对海洋酸化的适应能力存在差异。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-08-15 Epub Date: 2024-08-23 DOI: 10.1242/bio.060479
Dianna K Padilla, Lisa Milke, Morodoluwa Akin-Fajiye, Maria Rosa, Dylan Redman, Alyssa Liguori, Allison Rugila, David Veilleux, Mark Dixon, David Charifson, Shannon L Meseck

Ocean acidification (OA) caused by increased atmospheric carbon dioxide is affecting marine systems globally and is more extreme in coastal waters. A wealth of research to determine how species will be affected by OA, now and in the future, is emerging. Most studies are discrete and generally do not include the full life cycle of animals. Studies that include the potential for adaptation responses of animals from areas with different environmental conditions and the most vulnerable life stages are needed. Therefore, we conducted experiments with the widely distributed blue mussel, Mytilus edulis, from populations regularly exposed to different OA conditions. Mussels experienced experimental conditions prior to spawning, through embryonic and larval development, both highly vulnerable stages. Survivorship to metamorphosis of larvae from all populations was negatively affected by extreme OA conditions (pH 7.3, Ωar, 0.39, pCO2 2479.74), but, surprisingly, responses to mid OA (pH 7.6, Ωar 0.77, pCO21167.13) and low OA (pH 7.9, Ωar 1.53, pCO2 514.50) varied among populations. Two populations were robust and showed no effect of OA on survivorship in this range. One population displayed the expected negative effect on survivorship with increased OA. Unexpectedly, survivorship in the fourth population was highest under mid OA conditions. There were also significant differences in development time among populations that were unaffected by OA. These results suggest that adaptation to OA may already be present in some populations and emphasizes the importance of testing animals from different populations to see the potential for adaptation to OA.

大气中二氧化碳增加导致的海洋酸化(OA)正在全球范围内影响海洋系统,在沿海水域更为严重。目前正在开展大量研究,以确定现在和未来物种将如何受到 OA 的影响。大多数研究是离散的,一般不包括动物的整个生命周期。我们需要对来自不同环境条件地区的动物以及最脆弱生命阶段的潜在适应反应进行研究。因此,我们对分布广泛的蓝贻贝(Mytilus edulis)进行了实验,这些贻贝来自经常暴露于不同OA条件下的种群。贻贝在产卵前经历了胚胎和幼体发育这一非常脆弱的阶段。所有种群的幼体变态存活率都受到极端 OA 条件(pH 7.3,Ωar,0.39,pCO2 2479.74)的负面影响,但令人惊讶的是,不同种群对中度 OA(pH 7.6,Ωar 0.77,pCO21167.13)和低度 OA(pH 7.9,Ωar 1.53,pCO2 514.50)的反应各不相同。有两个种群很健壮,在此范围内 OA 对存活率没有影响。一个种群随着 OA 的增加对存活率产生了预期的负面影响。意外的是,第四个种群的存活率在中等 OA 条件下最高。不受 OA 影响的种群在发育时间上也存在显著差异。这些结果表明,对OA的适应可能已经存在于某些种群中,并强调了对来自不同种群的动物进行测试以了解其对OA的适应潜力的重要性。
{"title":"Local differences in robustness to ocean acidification.","authors":"Dianna K Padilla, Lisa Milke, Morodoluwa Akin-Fajiye, Maria Rosa, Dylan Redman, Alyssa Liguori, Allison Rugila, David Veilleux, Mark Dixon, David Charifson, Shannon L Meseck","doi":"10.1242/bio.060479","DOIUrl":"10.1242/bio.060479","url":null,"abstract":"<p><p>Ocean acidification (OA) caused by increased atmospheric carbon dioxide is affecting marine systems globally and is more extreme in coastal waters. A wealth of research to determine how species will be affected by OA, now and in the future, is emerging. Most studies are discrete and generally do not include the full life cycle of animals. Studies that include the potential for adaptation responses of animals from areas with different environmental conditions and the most vulnerable life stages are needed. Therefore, we conducted experiments with the widely distributed blue mussel, Mytilus edulis, from populations regularly exposed to different OA conditions. Mussels experienced experimental conditions prior to spawning, through embryonic and larval development, both highly vulnerable stages. Survivorship to metamorphosis of larvae from all populations was negatively affected by extreme OA conditions (pH 7.3, Ωar, 0.39, pCO2 2479.74), but, surprisingly, responses to mid OA (pH 7.6, Ωar 0.77, pCO21167.13) and low OA (pH 7.9, Ωar 1.53, pCO2 514.50) varied among populations. Two populations were robust and showed no effect of OA on survivorship in this range. One population displayed the expected negative effect on survivorship with increased OA. Unexpectedly, survivorship in the fourth population was highest under mid OA conditions. There were also significant differences in development time among populations that were unaffected by OA. These results suggest that adaptation to OA may already be present in some populations and emphasizes the importance of testing animals from different populations to see the potential for adaptation to OA.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-08-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11360139/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141747498","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Meeting proceedings of the 43rd Indian Association for Cancer Research (IACR). 第 43 届印度癌症研究协会(IACR)会议记录。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-08-15 Epub Date: 2024-08-14 DOI: 10.1242/bio.061613
Ajay J Malik, Radhika Malaviya

The 43rd Annual Conference of the Indian Association of Cancer Research (IACR) was held between 19th and 22nd January 2024 at the Indian Institute of Education and Research (IISER), Pune, India. Cancer is the second leading cause of death globally; efforts have been made to understand and treat this deadly disease for several decades. The 43rd IACR, organised by Mayurika Lahiri, Kundan Sengupta, Nagaraj Balasubramanian, Mridula Nambiar, Krishanpal Karmodiya, and Siddhesh Kamat, highlighted recent advances in cancer research, with implications in therapeutics at the forefront of the discussions. The meeting proved to be a promising platform for cancer researchers ranging from graduate and postdoctoral students to subject experts in varied aspects of cancer biology to showcase their research, ideate with their peers, and form collaborations.

第 43 届印度癌症研究协会(IACR)年会于 2024 年 1 月 19 日至 22 日在印度浦那的印度教育与研究所(IISER)举行。癌症是全球第二大死因;几十年来,人们一直在努力了解和治疗这一致命疾病。由 Mayurika Lahiri、Kundan Sengupta、Nagaraj Balasubramanian、Mridula Nambiar、Krishanpal Karmodiya 和 Siddhesh Kamat 组织的第 43 届国际癌症研究会议重点讨论了癌症研究的最新进展,并将治疗学的影响放在讨论的首位。事实证明,这次会议为癌症研究人员(从研究生和博士后到癌症生物学各方面的学科专家)提供了一个很好的平台,让他们展示自己的研究成果,与同行交流思想,并建立合作关系。
{"title":"Meeting proceedings of the 43rd Indian Association for Cancer Research (IACR).","authors":"Ajay J Malik, Radhika Malaviya","doi":"10.1242/bio.061613","DOIUrl":"10.1242/bio.061613","url":null,"abstract":"<p><p>The 43rd Annual Conference of the Indian Association of Cancer Research (IACR) was held between 19th and 22nd January 2024 at the Indian Institute of Education and Research (IISER), Pune, India. Cancer is the second leading cause of death globally; efforts have been made to understand and treat this deadly disease for several decades. The 43rd IACR, organised by Mayurika Lahiri, Kundan Sengupta, Nagaraj Balasubramanian, Mridula Nambiar, Krishanpal Karmodiya, and Siddhesh Kamat, highlighted recent advances in cancer research, with implications in therapeutics at the forefront of the discussions. The meeting proved to be a promising platform for cancer researchers ranging from graduate and postdoctoral students to subject experts in varied aspects of cancer biology to showcase their research, ideate with their peers, and form collaborations.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":"13 8","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-08-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11340811/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141975080","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Safety assessment of rat embryonic fraction for in vivo regenerative therapy. 用于体内再生疗法的大鼠胚胎部分的安全性评估。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-08-15 Epub Date: 2024-08-22 DOI: 10.1242/bio.060266
Sivarama Prasad Darsi, Somorita Baishya, Veerababu Nagati, Kala Kumar Bharani, Satyanarayana Swamy Cheekatla, Sujesh Kumar Darsi, Adi Reddy Kamireddy, Ram Reddy Barra, Ashok Kumar Devarasetti, Sreedhar Surampudi, Jayaram Reddy Singireddy, Siva Kumar Kandula, Anil Kumar Pasupulati

Regenerative therapy is considered a novel option for treating various diseases, whereas a developing embryo is a prime source of molecules that help repair diseased tissue and organs. Organoid culture studies also confirmed the inherent biological functions of several embryonic factors. However, the in vivo safety and efficacy of embryonic protein fraction (EPF) were not validated. In this study, we investigated the effectiveness of EPF on healthy adult rats. We obtained embryos from Sprague-Dawley (SD) female rats of E14, E16, and E19 embryonic days and collected protein lysate. This lysate was administered intravenously into adult SD rats on sequential days. We collected blood and performed hematological and biochemical parameters of rats that received EPF. C-reactive protein levels, interleukin-6, blood glucose levels, serum creatinine, blood urea, total leucocyte counts, and % of neutrophils and lymphocytes were comparable between rats receiving EPF and saline. Histological examination of rats' tissues administered with EPF is devoid of abnormalities. Our study revealed that intravenous administration of EPF to healthy adult rats showed that EPF is non-immunogenic, non-inflammatory, non-tumorigenic, and safe for in vivo applications. Our analysis suggests that EPF or its components could be recommended for validating its therapeutic abilities in organ regenerative therapy.

再生疗法被认为是治疗各种疾病的新选择,而发育中的胚胎是有助于修复病变组织和器官的分子的主要来源。类器官培养研究也证实了几种胚胎因子固有的生物功能。然而,胚胎蛋白组分(EPF)在体内的安全性和有效性尚未得到验证。在本研究中,我们调查了胚胎蛋白组分对健康成年大鼠的有效性。我们从 E14、E16 和 E19 胚胎日的 SD 雌性大鼠身上获取胚胎,并收集蛋白裂解液。连续几天给成年 Sprague-Dawley 大鼠静脉注射该裂解液。我们对接受 EPF 的大鼠进行了采血和血液生化指标检测。接受 EPF 和生理盐水治疗的大鼠的 C 反应蛋白水平、白细胞介素-6、血糖水平、血清肌酐、血尿素、白细胞总数以及中性粒细胞和淋巴细胞的百分比相当。接受 EPF 治疗的大鼠组织经组织学检查未见异常。我们的研究表明,对健康成年大鼠静脉注射 EPF 表明,EPF 具有非免疫原性、非炎症性、非致瘤性,在体内应用是安全的。我们的分析表明,可以推荐使用 EPF 或其成分来验证其在器官再生疗法中的治疗能力。
{"title":"Safety assessment of rat embryonic fraction for in vivo regenerative therapy.","authors":"Sivarama Prasad Darsi, Somorita Baishya, Veerababu Nagati, Kala Kumar Bharani, Satyanarayana Swamy Cheekatla, Sujesh Kumar Darsi, Adi Reddy Kamireddy, Ram Reddy Barra, Ashok Kumar Devarasetti, Sreedhar Surampudi, Jayaram Reddy Singireddy, Siva Kumar Kandula, Anil Kumar Pasupulati","doi":"10.1242/bio.060266","DOIUrl":"10.1242/bio.060266","url":null,"abstract":"<p><p>Regenerative therapy is considered a novel option for treating various diseases, whereas a developing embryo is a prime source of molecules that help repair diseased tissue and organs. Organoid culture studies also confirmed the inherent biological functions of several embryonic factors. However, the in vivo safety and efficacy of embryonic protein fraction (EPF) were not validated. In this study, we investigated the effectiveness of EPF on healthy adult rats. We obtained embryos from Sprague-Dawley (SD) female rats of E14, E16, and E19 embryonic days and collected protein lysate. This lysate was administered intravenously into adult SD rats on sequential days. We collected blood and performed hematological and biochemical parameters of rats that received EPF. C-reactive protein levels, interleukin-6, blood glucose levels, serum creatinine, blood urea, total leucocyte counts, and % of neutrophils and lymphocytes were comparable between rats receiving EPF and saline. Histological examination of rats' tissues administered with EPF is devoid of abnormalities. Our study revealed that intravenous administration of EPF to healthy adult rats showed that EPF is non-immunogenic, non-inflammatory, non-tumorigenic, and safe for in vivo applications. Our analysis suggests that EPF or its components could be recommended for validating its therapeutic abilities in organ regenerative therapy.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-08-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11360137/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141562712","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A fast fish swimming protocol that provides similar insights to critical swimming speed. 快速游鱼协议,可提供与临界游速类似的见解。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-08-15 Epub Date: 2024-08-12 DOI: 10.1242/bio.060543
Stephanie M Bamford, Frank Seebacher

Performance measures are an important tool to assess the impact of environmental change on animals. In fish, performance is often measured as critical swimming speed (Ucrit), which reflects individual maximal physiological capacities. A drawback of Ucrit is that trials are relatively long (∼30-75 min). Ucrit may therefore not be suitable for several repeated measurements because of the potential for training effects, long recovery periods, and low throughput. Here we test a shorter (∼4-5 min) protocol, "Ucrit fast" (UCfast) in zebrafish (Danio rerio). We show that UCfast and Ucrit have similar, significant repeatabilities within individuals. Unlike Ucrit, repeated UCfast trials did not elicit a training effect. Both UCfast and Ucrit provide the same insights into thermal acclimation, and both provide similar estimates of individual acclimation capacity in doubly acclimated fish. We propose that UCfast is a valid substitute for Ucrit particularly when higher throughput and several repeated measures are necessary.

性能测量是评估环境变化对动物影响的重要工具。在鱼类中,通常用临界游泳速度(Ucrit)来测量性能,它反映了个体的最大生理能力。临界游速的缺点是试验时间相对较长(30-75 分钟)。因此,Ucrit 可能不适合多次重复测量,因为可能会产生训练效应、恢复期较长和吞吐量较低。在这里,我们在斑马鱼(Danio rerio)中测试了一种更短(∼4-5 分钟)的方案,即 "快速超重"(UCfast)。我们发现,UCfast 和 Ucrit 在个体内具有相似且显著的重复性。与 Ucrit 不同的是,重复 UCfast 试验不会产生训练效应。UCfast 和 Ucrit 都能提供相同的热适应洞察力,而且两者都能提供类似的双重适应鱼类个体适应能力估计值。我们认为,UCfast 是 Ucrit 的有效替代品,尤其是在需要更高的吞吐量和多次重复测量的情况下。
{"title":"A fast fish swimming protocol that provides similar insights to critical swimming speed.","authors":"Stephanie M Bamford, Frank Seebacher","doi":"10.1242/bio.060543","DOIUrl":"10.1242/bio.060543","url":null,"abstract":"<p><p>Performance measures are an important tool to assess the impact of environmental change on animals. In fish, performance is often measured as critical swimming speed (Ucrit), which reflects individual maximal physiological capacities. A drawback of Ucrit is that trials are relatively long (∼30-75 min). Ucrit may therefore not be suitable for several repeated measurements because of the potential for training effects, long recovery periods, and low throughput. Here we test a shorter (∼4-5 min) protocol, \"Ucrit fast\" (UCfast) in zebrafish (Danio rerio). We show that UCfast and Ucrit have similar, significant repeatabilities within individuals. Unlike Ucrit, repeated UCfast trials did not elicit a training effect. Both UCfast and Ucrit provide the same insights into thermal acclimation, and both provide similar estimates of individual acclimation capacity in doubly acclimated fish. We propose that UCfast is a valid substitute for Ucrit particularly when higher throughput and several repeated measures are necessary.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-08-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11340812/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141791937","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The evolution of multicellularity and cell differentiation symposium: bridging evolutionary cell biology and computational modelling using emerging model systems. 多细胞性和细胞分化的进化专题讨论会:利用新兴模型系统连接进化细胞生物学和计算建模。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-07-15 Epub Date: 2024-10-07 DOI: 10.1242/bio.061720
Núria Ros-Rocher

'The evolution of multicellularity and cell differentiation' symposium, organized as part of the EuroEvoDevo 2024 meeting on June 25-28th in Helsinki (Finland), addressed recent advances on the molecular and mechanistic basis for the evolution of multicellularity and cell differentiation in eukaryotes. The symposium involved over 100 participants and brought together 10 speakers at diverse career stages. Talks covered various topics at the interface of developmental biology, evolutionary cell biology, comparative genomics, computational biology, and ecology using animal, protist, algal and mathematical models. This symposium offered a unique opportunity for interdisciplinary dialog among researchers working on different systems, especially in promoting collaborations and aligning strategies for studying emerging model species. Moreover, it fostered opportunities to promote early career researchers in the field and opened discussions of ongoing work and unpublished results. In this Meeting Review, we aim to promote the research, capture the spirit of the meeting, and present key topics discussed within this dynamic, growing and open community.

多细胞性和细胞分化的进化 "研讨会是欧洲多细胞生物进化论 2024 年会议的一部分,于 6 月 25-28 日在赫尔辛基(芬兰)举行,会议讨论了真核生物中多细胞性和细胞分化进化的分子和机理基础的最新进展。100 多名与会者参加了此次研讨会,10 位处于不同职业阶段的发言人汇聚一堂。演讲内容涉及发育生物学、进化细胞生物学、比较基因组学、计算生物学和生态学等领域,并使用了动物、原生动物、藻类和数学模型。本次研讨会为从事不同系统研究的研究人员提供了一次难得的跨学科对话机会,特别是在促进合作和协调研究新兴模式物种的战略方面。此外,会议还为促进该领域的早期职业研究人员提供了机会,并就正在进行的工作和未发表的成果展开了讨论。在这篇会议回顾中,我们旨在促进研究工作,捕捉会议精神,并介绍在这个充满活力、不断发展和开放的社区中讨论的主要议题。
{"title":"The evolution of multicellularity and cell differentiation symposium: bridging evolutionary cell biology and computational modelling using emerging model systems.","authors":"Núria Ros-Rocher","doi":"10.1242/bio.061720","DOIUrl":"10.1242/bio.061720","url":null,"abstract":"<p><p>'The evolution of multicellularity and cell differentiation' symposium, organized as part of the EuroEvoDevo 2024 meeting on June 25-28th in Helsinki (Finland), addressed recent advances on the molecular and mechanistic basis for the evolution of multicellularity and cell differentiation in eukaryotes. The symposium involved over 100 participants and brought together 10 speakers at diverse career stages. Talks covered various topics at the interface of developmental biology, evolutionary cell biology, comparative genomics, computational biology, and ecology using animal, protist, algal and mathematical models. This symposium offered a unique opportunity for interdisciplinary dialog among researchers working on different systems, especially in promoting collaborations and aligning strategies for studying emerging model species. Moreover, it fostered opportunities to promote early career researchers in the field and opened discussions of ongoing work and unpublished results. In this Meeting Review, we aim to promote the research, capture the spirit of the meeting, and present key topics discussed within this dynamic, growing and open community.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":"13 10","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11554258/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142380074","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Flavonols do not affect aphid load in green or senescing birch leaves but coincide with a decrease in Photosystem II functionality. 黄酮醇不会影响绿色或衰老桦树叶片中的蚜虫数量,但会导致光系统 II 功能下降。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-07-15 Epub Date: 2024-07-02 DOI: 10.1242/bio.060325
Heta Mattila, Sergey Khorobrykh, Esa Tyystjärvi

Instead of red anthocyanins, birches synthesise colourless (to human eye), UV-absorbing flavonols during autumn senescence. To test if flavonols protect against insects, and if leaves with high or low amounts of flavonols differ in their photosynthetic functions, aphid-free and aphid-infested green and senescing birch leaves were collected from outdoor-grown trees and analysed. Photosynthetic parameters were greatly affected by the leaf chlorophyll content (i.e. the phase of senescence). Photochemical quenching and the amount of functional Photosystem I decreased linearly with chlorophyll content, while FV/FM (Photosystem II functionality) decreased strongly only at the end of senescence. Non-photochemical quenching of excitation energy (NPQ) increased towards the end of senescence. However, no significant differences in the total flavonol amounts, nor in individual flavonol species, were found between aphid-free and aphid-infested leaves, suggesting that flavonols play no role in defence against aphid herbivory. Interestingly, both green and senescing leaves with a high flavonol content showed low FV/FM values. High flavonol content slowed down PSII photoinhibition and improved recovery, but only in green leaves. Previously, we proposed that anthocyanins provide an additional sink for photosynthates at the nitrogen resorption phase during autumn senescence, and the present data may suggest that flavonol synthesis plays a similar role.

桦树在秋季衰老期合成的不是红色花青素,而是无色(人眼可见)、吸收紫外线的黄酮醇。为了测试黄酮醇是否能抵御昆虫,以及黄酮醇含量高或低的叶片在光合作用功能上是否存在差异,研究人员从室外生长的桦树上采集了无蚜虫和有蚜虫的绿叶和衰老的桦树叶片,并对其进行了分析。叶片叶绿素含量(即衰老阶段)对光合作用参数有很大影响。光化学淬灭和有功能的光系统 I 的数量随叶绿素含量呈线性下降,而 FV/FM(光系统 II 的功能)只有在衰老末期才会强烈下降。激发能量的非光化学淬灭(NPQ)在衰老末期有所增加。然而,无蚜虫和受蚜虫侵染的叶片在黄酮醇总量和单个黄酮醇种类上都没有发现明显差异,这表明黄酮醇在抵御蚜虫草食方面没有发挥作用。有趣的是,黄酮醇含量高的绿叶和衰老叶的 FV/FM 值都很低。高含量的黄酮醇减缓了PSII的光抑制作用,并改善了恢复状况,但这只适用于绿叶。以前,我们曾提出花青素在秋季衰老的氮吸收阶段为光合作用提供了一个额外的汇,而本研究数据可能表明黄酮醇的合成也起着类似的作用。
{"title":"Flavonols do not affect aphid load in green or senescing birch leaves but coincide with a decrease in Photosystem II functionality.","authors":"Heta Mattila, Sergey Khorobrykh, Esa Tyystjärvi","doi":"10.1242/bio.060325","DOIUrl":"10.1242/bio.060325","url":null,"abstract":"<p><p>Instead of red anthocyanins, birches synthesise colourless (to human eye), UV-absorbing flavonols during autumn senescence. To test if flavonols protect against insects, and if leaves with high or low amounts of flavonols differ in their photosynthetic functions, aphid-free and aphid-infested green and senescing birch leaves were collected from outdoor-grown trees and analysed. Photosynthetic parameters were greatly affected by the leaf chlorophyll content (i.e. the phase of senescence). Photochemical quenching and the amount of functional Photosystem I decreased linearly with chlorophyll content, while FV/FM (Photosystem II functionality) decreased strongly only at the end of senescence. Non-photochemical quenching of excitation energy (NPQ) increased towards the end of senescence. However, no significant differences in the total flavonol amounts, nor in individual flavonol species, were found between aphid-free and aphid-infested leaves, suggesting that flavonols play no role in defence against aphid herbivory. Interestingly, both green and senescing leaves with a high flavonol content showed low FV/FM values. High flavonol content slowed down PSII photoinhibition and improved recovery, but only in green leaves. Previously, we proposed that anthocyanins provide an additional sink for photosynthates at the nitrogen resorption phase during autumn senescence, and the present data may suggest that flavonol synthesis plays a similar role.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11261631/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141330420","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Allorecognition behaviors in Myxomycetes respond to intraspecies factors. 近缘真菌的异源认知行为与种内因素有关。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-07-15 Epub Date: 2024-07-25 DOI: 10.1242/bio.060358
Mana Masui, Phillip K Yamamoto, Nobuaki Kono

Myxomycetes are multinucleate unicellular organisms. They form a Plasmodium that moves by protoplasmic flow and prey on microorganisms. When encountering intraspecifics, the plasmodium has the capacity for 'fusion', actively approaching and fusing its cells, or 'avoidance', altering its direction to avoid the other individual. This is an allorecognition ability. However, it remains unclear whether the range of allorecognition extends to other species, and its ecological significance is also obscure. Here, we conducted a quantitative evaluation of contact responses from closely related species of plasmodium to clarify the range of allorecognition behaviors in Myxomycetes. Behavioral assays demonstrated that allorecognition behaviors are specifically observed within individuals of the same species, indicating that these behaviors are a phenomenon unique to intraspecies interactions. Myxomycetes allorecognition is an extremely narrow and inward-focused behavior, suggesting a highly specialized mechanism.

粘菌是多核单细胞生物。它们通过原生质流动形成质体,捕食微生物。当遇到种内生物时,质体能够 "融合",主动靠近并融合自己的细胞,或者 "避开",改变方向以避开对方。这是一种异体识别能力。然而,异源认知的范围是否扩展到其他物种仍不清楚,其生态学意义也不明确。在这里,我们对密切相关的疟原虫物种的接触反应进行了定量评估,以澄清粘菌类的异源识别行为的范围。行为测定结果表明,同种异源识别行为是在同一物种的个体内观察到的,这表明这些行为是种内相互作用所特有的现象。粘菌的异源识别是一种极其狭隘和内向的行为,表明这是一种高度专门化的机制。
{"title":"Allorecognition behaviors in Myxomycetes respond to intraspecies factors.","authors":"Mana Masui, Phillip K Yamamoto, Nobuaki Kono","doi":"10.1242/bio.060358","DOIUrl":"10.1242/bio.060358","url":null,"abstract":"<p><p>Myxomycetes are multinucleate unicellular organisms. They form a Plasmodium that moves by protoplasmic flow and prey on microorganisms. When encountering intraspecifics, the plasmodium has the capacity for 'fusion', actively approaching and fusing its cells, or 'avoidance', altering its direction to avoid the other individual. This is an allorecognition ability. However, it remains unclear whether the range of allorecognition extends to other species, and its ecological significance is also obscure. Here, we conducted a quantitative evaluation of contact responses from closely related species of plasmodium to clarify the range of allorecognition behaviors in Myxomycetes. Behavioral assays demonstrated that allorecognition behaviors are specifically observed within individuals of the same species, indicating that these behaviors are a phenomenon unique to intraspecies interactions. Myxomycetes allorecognition is an extremely narrow and inward-focused behavior, suggesting a highly specialized mechanism.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11445841/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141442139","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Changes in mitochondrial distribution occur at the axon initial segment in association with neurodegeneration in Drosophila. 线粒体分布在果蝇轴突初段的变化与神经退化有关。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-07-15 Epub Date: 2024-07-11 DOI: 10.1242/bio.060335
Andrew P K Wodrich, Brent T Harris, Edward Giniger

Changes in mitochondrial distribution are a feature of numerous age-related neurodegenerative diseases. In Drosophila, reducing the activity of Cdk5 causes a neurodegenerative phenotype and is known to affect several mitochondrial properties. Therefore, we investigated whether alterations of mitochondrial distribution are involved in Cdk5-associated neurodegeneration. We find that reducing Cdk5 activity does not alter the balance of mitochondrial localization to the somatodendritic versus axonal neuronal compartments of the mushroom body, the learning and memory center of the Drosophila brain. We do, however, observe changes in mitochondrial distribution at the axon initial segment (AIS), a neuronal compartment located in the proximal axon involved in neuronal polarization and action potential initiation. Specifically, we observe that mitochondria are partially excluded from the AIS in wild-type neurons, but that this exclusion is lost upon reduction of Cdk5 activity, concomitant with the shrinkage of the AIS domain that is known to occur in this condition. This mitochondrial redistribution into the AIS is not likely due to the shortening of the AIS domain itself but rather due to altered Cdk5 activity. Furthermore, mitochondrial redistribution into the AIS is unlikely to be an early driver of neurodegeneration in the context of reduced Cdk5 activity.

线粒体分布的变化是许多与年龄有关的神经退行性疾病的特征之一。在果蝇中,降低 Cdk5 的活性会导致神经退行性表型,而且已知 Cdk5 会影响线粒体的多种特性。因此,我们研究了线粒体分布的改变是否与 Cdk5 相关的神经退行性病变有关。我们发现,降低 Cdk5 的活性并不会改变线粒体在果蝇大脑的学习和记忆中心--蘑菇体的体突神经元区与轴突神经元区的定位平衡。不过,我们确实观察到线粒体在轴突起始段(AIS)的分布发生了变化,该神经元区室位于轴突近端,参与神经元极化和动作电位的启动。具体来说,我们观察到,在野生型神经元中,线粒体部分被排除在 AIS 之外,但当 Cdk5 活性降低时,这种排除作用就会消失,同时 AIS 结构域也会缩小,众所周知,在这种情况下,AIS 结构域会缩小。线粒体重新分布到 AIS 的原因可能不是 AIS 结构域本身的缩短,而是 Cdk5 活性的改变。此外,在 Cdk5 活性降低的情况下,线粒体重新分布到 AIS 不太可能成为神经退行性变的早期驱动因素。
{"title":"Changes in mitochondrial distribution occur at the axon initial segment in association with neurodegeneration in Drosophila.","authors":"Andrew P K Wodrich, Brent T Harris, Edward Giniger","doi":"10.1242/bio.060335","DOIUrl":"10.1242/bio.060335","url":null,"abstract":"<p><p>Changes in mitochondrial distribution are a feature of numerous age-related neurodegenerative diseases. In Drosophila, reducing the activity of Cdk5 causes a neurodegenerative phenotype and is known to affect several mitochondrial properties. Therefore, we investigated whether alterations of mitochondrial distribution are involved in Cdk5-associated neurodegeneration. We find that reducing Cdk5 activity does not alter the balance of mitochondrial localization to the somatodendritic versus axonal neuronal compartments of the mushroom body, the learning and memory center of the Drosophila brain. We do, however, observe changes in mitochondrial distribution at the axon initial segment (AIS), a neuronal compartment located in the proximal axon involved in neuronal polarization and action potential initiation. Specifically, we observe that mitochondria are partially excluded from the AIS in wild-type neurons, but that this exclusion is lost upon reduction of Cdk5 activity, concomitant with the shrinkage of the AIS domain that is known to occur in this condition. This mitochondrial redistribution into the AIS is not likely due to the shortening of the AIS domain itself but rather due to altered Cdk5 activity. Furthermore, mitochondrial redistribution into the AIS is unlikely to be an early driver of neurodegeneration in the context of reduced Cdk5 activity.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11261633/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141442140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Note on hydrostatic skeletons: muscles operating within a pressurized environment. 关于静水骨骼的说明:在加压环境中工作的肌肉。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-07-15 Epub Date: 2024-07-02 DOI: 10.1242/bio.060318
Reinhard Blickhan, Tobias Siebert

Muscles and muscle fibers are volume-constant constructs that deform when contracted and develop internal pressures. However, muscles embedded in hydrostatic skeletons are also exposed to external pressures generated by their activity. For two examples, the pressure generation in spiders and in annelids, we used simplified biomechanical models to demonstrate that high intracellular pressures diminishing the resulting tensile stress of the muscle fibers are avoided in the hydrostatic skeleton. The findings are relevant for a better understanding of the design and functionality of biological hydrostatic skeletons.

肌肉和肌纤维是体积恒定的结构,收缩时会变形并产生内部压力。然而,嵌入静水骨骼中的肌肉也会受到其活动产生的外部压力的影响。我们以蜘蛛和无脊椎动物体内产生的压力为例,使用简化的生物力学模型证明,在静水骨架中可以避免细胞内的高压力减小肌肉纤维产生的拉伸应力。这些发现有助于更好地理解生物静水骨骼的设计和功能。
{"title":"Note on hydrostatic skeletons: muscles operating within a pressurized environment.","authors":"Reinhard Blickhan, Tobias Siebert","doi":"10.1242/bio.060318","DOIUrl":"10.1242/bio.060318","url":null,"abstract":"<p><p>Muscles and muscle fibers are volume-constant constructs that deform when contracted and develop internal pressures. However, muscles embedded in hydrostatic skeletons are also exposed to external pressures generated by their activity. For two examples, the pressure generation in spiders and in annelids, we used simplified biomechanical models to demonstrate that high intracellular pressures diminishing the resulting tensile stress of the muscle fibers are avoided in the hydrostatic skeleton. The findings are relevant for a better understanding of the design and functionality of biological hydrostatic skeletons.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11261639/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141179005","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Differentiation of CD166-positive hPSC-derived lung progenitors into airway epithelial cells. 将 CD166 阳性 hPSC 衍生的肺祖细胞分化为气道上皮细胞。
IF 1.8 4区 生物学 Q3 BIOLOGY Pub Date : 2024-07-15 Epub Date: 2024-10-10 DOI: 10.1242/bio.061729
Kim Jee Goh, Hao Lu, Ee Kim Tan, Zhao Yong Lee, Amanda Wong, Thai Tran, N Ray Dunn, Sudipto Roy

The generation of lung epithelial cells through the directed differentiation of human pluripotent stem cells (hPSCs) in vitro provides a platform to model both embryonic lung development and adult airway disease. Here, we describe a robust differentiation protocol that closely recapitulates human embryonic lung development. Differentiating cells progress through obligate intermediate stages, beginning with definitive endoderm formation and then patterning into anterior foregut endoderm that yields lung progenitors (LPs) with extended culture. These LPs can be purified using the cell surface marker CD166 (also known as ALCAM), and further matured into proximal airway epithelial cells including basal cells, secretory cells and multiciliated cells using either an organoid platform or culture at the air-liquid interface (ALI). We additionally demonstrate that these hPSC-derived airway epithelial cells can be used to model Influenza A infection. Collectively, our results underscore the utility of CD166 expression for the efficient enrichment of LPs from heterogenous differentiation cultures and the ability of these isolated cells to mature into more specialized, physiologically relevant proximal lung cell types.

通过体外定向分化人多能干细胞(hPSCs)生成肺上皮细胞为模拟胚胎肺发育和成人气道疾病提供了一个平台。在这里,我们描述了一种可近似再现人类胚胎肺发育的稳健分化方案。分化细胞会经历强制性的中间阶段,从确定的内胚层形成开始,然后模式化为前肠内胚层,经长时间培养后产生肺祖细胞(LPs)。这些肺原细胞可利用细胞表面标记物 CD166(也称 ALCAM)进行纯化,并利用类器官平台或气液界面(ALI)培养进一步成熟为近端气道上皮细胞,包括基底细胞、分泌细胞和多纤毛细胞。我们还证明,这些 hPSC 衍生的气道上皮细胞可用于模拟甲型流感感染。总之,我们的研究结果强调了 CD166 表达在从异源分化培养物中有效富集 LPs 方面的实用性,以及这些分离细胞成熟为更特化、更符合生理相关性的近肺细胞类型的能力。
{"title":"Differentiation of CD166-positive hPSC-derived lung progenitors into airway epithelial cells.","authors":"Kim Jee Goh, Hao Lu, Ee Kim Tan, Zhao Yong Lee, Amanda Wong, Thai Tran, N Ray Dunn, Sudipto Roy","doi":"10.1242/bio.061729","DOIUrl":"10.1242/bio.061729","url":null,"abstract":"<p><p>The generation of lung epithelial cells through the directed differentiation of human pluripotent stem cells (hPSCs) in vitro provides a platform to model both embryonic lung development and adult airway disease. Here, we describe a robust differentiation protocol that closely recapitulates human embryonic lung development. Differentiating cells progress through obligate intermediate stages, beginning with definitive endoderm formation and then patterning into anterior foregut endoderm that yields lung progenitors (LPs) with extended culture. These LPs can be purified using the cell surface marker CD166 (also known as ALCAM), and further matured into proximal airway epithelial cells including basal cells, secretory cells and multiciliated cells using either an organoid platform or culture at the air-liquid interface (ALI). We additionally demonstrate that these hPSC-derived airway epithelial cells can be used to model Influenza A infection. Collectively, our results underscore the utility of CD166 expression for the efficient enrichment of LPs from heterogenous differentiation cultures and the ability of these isolated cells to mature into more specialized, physiologically relevant proximal lung cell types.</p>","PeriodicalId":9216,"journal":{"name":"Biology Open","volume":"13 10","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11554259/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142458413","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Biology Open
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1