Pub Date : 2024-05-20DOI: 10.1186/s12862-024-02257-8
Balázs Király, Tamás Varga, György Szabó, József Garay
Background: Classical matrix game models aim to find the endpoint of behavioural evolution for a set of fixed possible interaction outcomes. Here, we introduce an evolutionary model in which not only the players' strategies but also the payoff matrix evolves according to natural selection.
Results: We start out from the hawk-dove matrix game and, in a way that is consistent with the monomorphic model setup of Maynard Smith and Price, introduce an evolving phenotypic trait that quantifies fighting ability and determines the probability of winning and the cost of losing escalated hawk-hawk fights. We define evolutionarily stable phenotypes as consisting of an evolutionarily stable strategy and an evolutionarily stable trait, which in turn describes a corresponding evolutionarily stable payoff matrix.
Conclusions: We find that the maximal possible cost of escalating fights remains constant during evolution assuming a separation in the time scales of fast behavioural and slow trait selection, despite the fact that the final evolutionarily stable phenotype maximizes the payoff of hawk-hawk fights. Our results mirror the dual nature of Darwinian evolution whereby the criteria of evolutionary success, as well as the successful phenotypes themselves, are a product of natural selection.
{"title":"Evolutionarily stable payoff matrix in hawk-dove games.","authors":"Balázs Király, Tamás Varga, György Szabó, József Garay","doi":"10.1186/s12862-024-02257-8","DOIUrl":"10.1186/s12862-024-02257-8","url":null,"abstract":"<p><strong>Background: </strong>Classical matrix game models aim to find the endpoint of behavioural evolution for a set of fixed possible interaction outcomes. Here, we introduce an evolutionary model in which not only the players' strategies but also the payoff matrix evolves according to natural selection.</p><p><strong>Results: </strong>We start out from the hawk-dove matrix game and, in a way that is consistent with the monomorphic model setup of Maynard Smith and Price, introduce an evolving phenotypic trait that quantifies fighting ability and determines the probability of winning and the cost of losing escalated hawk-hawk fights. We define evolutionarily stable phenotypes as consisting of an evolutionarily stable strategy and an evolutionarily stable trait, which in turn describes a corresponding evolutionarily stable payoff matrix.</p><p><strong>Conclusions: </strong>We find that the maximal possible cost of escalating fights remains constant during evolution assuming a separation in the time scales of fast behavioural and slow trait selection, despite the fact that the final evolutionarily stable phenotype maximizes the payoff of hawk-hawk fights. Our results mirror the dual nature of Darwinian evolution whereby the criteria of evolutionary success, as well as the successful phenotypes themselves, are a product of natural selection.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"65"},"PeriodicalIF":0.0,"publicationDate":"2024-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11107024/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141072309","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-19DOI: 10.1186/s12862-024-02255-w
Isabella Mandl, Amelaid Houmadi, Ishaka Said, Badrane Ben Ali Abdou, Nastazia Mohamed, Abdoulkader Fardane, Samirou Soulaïmana, Misbahou Mohamed, Ben Anthoy M, Hugh Doulton
Flying foxes of the genus Pteropus, especially those inhabiting islands, face increasing pressure from anthropogenic threats. A first step to implementing effective conservation actions is to establish monitoring projects to understand a species' population status and trend. Pteropus species are highly affected by seasonality which further requires regular, repeated, and long-term data to understand population trends, and reactions to severe weather events. In the present case study, a regular, bi-annual population census was implemented on Comoros between 2016 and 2023 for the highly threatened Livingstone's fruit bat, Pteropus livingstonii, and compared the results of standardized monitoring to historical population data. Seasonality had a large impact on the number of bats found at roost sites, with more bats present in the wet season, but the data over the past eight years revealed no significant in- or decrease in the number of bats counted on the island Anjouan. We estimated around 1,200-1,500 bats on Anjouan and 300-400 bats on Mohéli, and found that landcover type has no measurable effect on population distribution at roost sites. Our study highlights the need for long-term surveys to understand past population trends and that single counts are not sufficient to draw final conclusions of a species' status.
{"title":"Seasonal trends and population status of the highly threatened Pteropus livingstonii in the Comoros archipelago.","authors":"Isabella Mandl, Amelaid Houmadi, Ishaka Said, Badrane Ben Ali Abdou, Nastazia Mohamed, Abdoulkader Fardane, Samirou Soulaïmana, Misbahou Mohamed, Ben Anthoy M, Hugh Doulton","doi":"10.1186/s12862-024-02255-w","DOIUrl":"10.1186/s12862-024-02255-w","url":null,"abstract":"<p><p>Flying foxes of the genus Pteropus, especially those inhabiting islands, face increasing pressure from anthropogenic threats. A first step to implementing effective conservation actions is to establish monitoring projects to understand a species' population status and trend. Pteropus species are highly affected by seasonality which further requires regular, repeated, and long-term data to understand population trends, and reactions to severe weather events. In the present case study, a regular, bi-annual population census was implemented on Comoros between 2016 and 2023 for the highly threatened Livingstone's fruit bat, Pteropus livingstonii, and compared the results of standardized monitoring to historical population data. Seasonality had a large impact on the number of bats found at roost sites, with more bats present in the wet season, but the data over the past eight years revealed no significant in- or decrease in the number of bats counted on the island Anjouan. We estimated around 1,200-1,500 bats on Anjouan and 300-400 bats on Mohéli, and found that landcover type has no measurable effect on population distribution at roost sites. Our study highlights the need for long-term surveys to understand past population trends and that single counts are not sufficient to draw final conclusions of a species' status.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"64"},"PeriodicalIF":0.0,"publicationDate":"2024-05-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11103843/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141066459","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-14DOI: 10.1186/s12862-024-02254-x
Ying Yu, Mei-Ying Fan, Hong-Xia Zhou, Yue-Qin Song
The geographical and ecological patterns of morphological disparity are crucial to understand how species are assembled within communities in the context of the evolutionary history, morphological evolution and ecological interactions. However, with limited exceptions, rather few studies have been conducted on the global pattern of disparity, particularly in early land plants. Here we explored the spatial accumulation of disparity in a morphologically variable and species rich liverwort genus Frullania in order to test the hypothesis of latitude disparity gradient. We compiled a morphological data set consisting of eight continuous traits for 244 currently accepted species, and scored the species distribution into 19 floristic regions worldwide. By reconstructing the morphospace of all defined regions and comparisons, we identified a general Gondwana-Laurasia pattern of disparity in Frullania. This likely results from an increase of ecological opportunities and / or relaxed constraints towards low latitudes. The lowest disparity occurred in arid tropical regions, largely due to a high extinction rate as a consequence of paleoaridification. There was weak correlation between species diversity and disparity at different spatial scales. Furthermore, long-distance dispersal may have partially shaped the present-day distribution of Frullania disparity, given its frequency and the great contribution of widely distributed species to local morphospace. This study not only highlighted the crucial roles of paleoenvironmental changes, ecological opportunities, and efficient dispersal on the global pattern of plant disparity, but also implied its dependence on the ecological and physiological function of traits.
{"title":"The global pattern of epiphytic liverwort disparity: insights from Frullania.","authors":"Ying Yu, Mei-Ying Fan, Hong-Xia Zhou, Yue-Qin Song","doi":"10.1186/s12862-024-02254-x","DOIUrl":"10.1186/s12862-024-02254-x","url":null,"abstract":"<p><p>The geographical and ecological patterns of morphological disparity are crucial to understand how species are assembled within communities in the context of the evolutionary history, morphological evolution and ecological interactions. However, with limited exceptions, rather few studies have been conducted on the global pattern of disparity, particularly in early land plants. Here we explored the spatial accumulation of disparity in a morphologically variable and species rich liverwort genus Frullania in order to test the hypothesis of latitude disparity gradient. We compiled a morphological data set consisting of eight continuous traits for 244 currently accepted species, and scored the species distribution into 19 floristic regions worldwide. By reconstructing the morphospace of all defined regions and comparisons, we identified a general Gondwana-Laurasia pattern of disparity in Frullania. This likely results from an increase of ecological opportunities and / or relaxed constraints towards low latitudes. The lowest disparity occurred in arid tropical regions, largely due to a high extinction rate as a consequence of paleoaridification. There was weak correlation between species diversity and disparity at different spatial scales. Furthermore, long-distance dispersal may have partially shaped the present-day distribution of Frullania disparity, given its frequency and the great contribution of widely distributed species to local morphospace. This study not only highlighted the crucial roles of paleoenvironmental changes, ecological opportunities, and efficient dispersal on the global pattern of plant disparity, but also implied its dependence on the ecological and physiological function of traits.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"63"},"PeriodicalIF":0.0,"publicationDate":"2024-05-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11092184/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140917201","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-13DOI: 10.1186/s12862-024-02240-3
Xiaolin Chen, Lili Li, Yuanhao He
The epiphytic and endophytic bacteria play an important role in the healthy growth of plants. Both plant species and growth environmental influence the bacterial population diversity, yet it is inconclusive whether it is the former or the latter that has a greater impact. To explore the communities of the epiphytic and endophytic microbes in Camellia oleifera, this study assessed three representative C. oleifera cultivars from three areas in Hunan, China by Illumina high-throughput sequencing. The results showed that the diversity and species richness of endophytic microbial community in leaves were significantly higher than those of microbial community in the epiphytic. The diversity and species richness of epiphytic and endophytic microbes are complex when the same cultivar was grown in different areas. The C. oleifera cultivars grown in Youxian had the highest diversity of epiphytic microbial community, but the lowest abundance, while the cultivars grown in Changsha had the highest diversity and species richness of endophytic microbes in leaves. It was concluded that the dominant phylum mainly included Proteobacteria, Actinobacteriota and Firmicutes through the analysis of the epiphytic and endophytic microbial communities of C. oleifera. The species and relative abundances of epiphytic and endophytic microbial community were extremely different at the genus level. The analysis of NMDS map and PERMANOVA shows that the species richness and diversity of microbial communities in epiphytes are greatly influenced by region. However, the community structure of endophytic microorganisms in leaves is influenced by region and cultivated varieties, but the influence of cultivars is more significant. Molecular ecological network analysis showed that the symbiotic interaction of epiphytic microbial community was more complex.
{"title":"Epiphytic and endophytic bacteria on Camellia oleifera phyllosphere: exploring region and cultivar effect.","authors":"Xiaolin Chen, Lili Li, Yuanhao He","doi":"10.1186/s12862-024-02240-3","DOIUrl":"10.1186/s12862-024-02240-3","url":null,"abstract":"<p><p>The epiphytic and endophytic bacteria play an important role in the healthy growth of plants. Both plant species and growth environmental influence the bacterial population diversity, yet it is inconclusive whether it is the former or the latter that has a greater impact. To explore the communities of the epiphytic and endophytic microbes in Camellia oleifera, this study assessed three representative C. oleifera cultivars from three areas in Hunan, China by Illumina high-throughput sequencing. The results showed that the diversity and species richness of endophytic microbial community in leaves were significantly higher than those of microbial community in the epiphytic. The diversity and species richness of epiphytic and endophytic microbes are complex when the same cultivar was grown in different areas. The C. oleifera cultivars grown in Youxian had the highest diversity of epiphytic microbial community, but the lowest abundance, while the cultivars grown in Changsha had the highest diversity and species richness of endophytic microbes in leaves. It was concluded that the dominant phylum mainly included Proteobacteria, Actinobacteriota and Firmicutes through the analysis of the epiphytic and endophytic microbial communities of C. oleifera. The species and relative abundances of epiphytic and endophytic microbial community were extremely different at the genus level. The analysis of NMDS map and PERMANOVA shows that the species richness and diversity of microbial communities in epiphytes are greatly influenced by region. However, the community structure of endophytic microorganisms in leaves is influenced by region and cultivated varieties, but the influence of cultivars is more significant. Molecular ecological network analysis showed that the symbiotic interaction of epiphytic microbial community was more complex.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"62"},"PeriodicalIF":0.0,"publicationDate":"2024-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11089727/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140912947","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-11DOI: 10.1186/s12862-024-02252-z
Yu Zhang, Jiawei Liu, Ke Zhang, Anqi Wang, Duishan Sailikebieke, Zexin Zhang, Tegen Ao, Liping Yan, Dong Zhang, Kai Li, Heqing Huang
Background: Reintroduction represents an effective strategy for the conservation of endangered wildlife, yet it might inadvertently impact the native ecosystems. This investigation assesses the impact of reintroducing endangered Przewalski's horses into the desert grassland ecosystem of the Kalamaili Nature Reserve (KNR), particularly its effect on the spatial distribution of ticks. In a 25 km2 core area of Przewalski's horse distribution, we set up 441 tick sampling sites across diverse habitats, including water sources, donkey trails, and grasslands, recording horse feces and characteristics to analyze the occurrence rate of ticks. Additionally, we gathered the data of 669 fresh feces of horses. To evaluate the spatial dynamics between these feces and ticks, we used methods such as Fixed Kernel Estimation (FKE), Moran's I spatial autocorrelation index, and Generalized Linear Models (GLM).
Results: The dominant species of ticks collected in the core area were adult Hyalomma asiaticum (91.36%). Their occurrence rate was higher near donkey trails (65.99%) and water sources (55.81%), particularly in areas with the fresh feces of Przewalski's horses. The ticks' three risk areas, as defined by FKE, showed significant overlap and positive correlation with the distribution of Przewalski's horses, with respective overlap rates being 90.25% in high risk, 33.79% in medium risk, and 23.09% in low risk areas. Moran's I analysis revealed a clustering trend of the fresh feces of Przewalski's horses in these areas. The GLM confirmed a positive correlation between the distribution of H. asiaticum and the presence of horse fresh feces, alongside a negative correlation with the proximity to water sources and donkey trails.
Conclusions: This study reveals the strong spatial correlation between Przewalski's horses and H. asiaticum in desert grasslands, underlining the need to consider interspecific interactions in wildlife reintroductions. The findings are crucial for shaping effective strategies of wildlife conservation and maintaining ecological balance.
背景:重引进是保护濒危野生动物的一种有效策略,但可能会无意中对原生生态系统造成影响。本研究评估了将濒危普氏马重新引入卡拉麦里自然保护区(KNR)荒漠草原生态系统的影响,尤其是对蜱虫空间分布的影响。在普氏马分布的 25 平方公里核心区域,我们设置了 441 个蜱虫采样点,遍布水源、驴道和草原等不同生境,记录马的粪便和特征,分析蜱虫的发生率。此外,我们还收集了 669 匹马的新鲜粪便数据。为了评估这些粪便与蜱虫之间的空间动态关系,我们使用了固定核估计(FKE)、莫兰 I 空间自相关指数和广义线性模型(GLM)等方法:在核心区采集到的主要蜱虫种类是成蜱(91.36%)。它们在驴道附近(65.99%)和水源附近(55.81%)的出现率较高,尤其是在有普氏马新鲜粪便的地区。根据 FKE 的定义,蜱虫的三个风险区域与普氏马分布有明显的重叠和正相关,重叠率分别为:高风险区域 90.25%,中风险区域 33.79%,低风险区域 23.09%。莫兰 I 分析显示,普氏马的新鲜粪便在这些地区呈聚集趋势。GLM 证实,H. asiaticum 的分布与马新鲜粪便的存在呈正相关,而与水源和驴道的距离呈负相关:这项研究揭示了普氏马与H. asiaticum在荒漠草原上的强烈空间相关性,强调了在重新引入野生动物时考虑种间相互作用的必要性。这些发现对于制定有效的野生动物保护战略和维持生态平衡至关重要。
{"title":"Biological response to Przewalski's horse reintroduction in native desert grasslands: a case study on the spatial analysis of ticks.","authors":"Yu Zhang, Jiawei Liu, Ke Zhang, Anqi Wang, Duishan Sailikebieke, Zexin Zhang, Tegen Ao, Liping Yan, Dong Zhang, Kai Li, Heqing Huang","doi":"10.1186/s12862-024-02252-z","DOIUrl":"10.1186/s12862-024-02252-z","url":null,"abstract":"<p><strong>Background: </strong>Reintroduction represents an effective strategy for the conservation of endangered wildlife, yet it might inadvertently impact the native ecosystems. This investigation assesses the impact of reintroducing endangered Przewalski's horses into the desert grassland ecosystem of the Kalamaili Nature Reserve (KNR), particularly its effect on the spatial distribution of ticks. In a 25 km<sup>2</sup> core area of Przewalski's horse distribution, we set up 441 tick sampling sites across diverse habitats, including water sources, donkey trails, and grasslands, recording horse feces and characteristics to analyze the occurrence rate of ticks. Additionally, we gathered the data of 669 fresh feces of horses. To evaluate the spatial dynamics between these feces and ticks, we used methods such as Fixed Kernel Estimation (FKE), Moran's I spatial autocorrelation index, and Generalized Linear Models (GLM).</p><p><strong>Results: </strong>The dominant species of ticks collected in the core area were adult Hyalomma asiaticum (91.36%). Their occurrence rate was higher near donkey trails (65.99%) and water sources (55.81%), particularly in areas with the fresh feces of Przewalski's horses. The ticks' three risk areas, as defined by FKE, showed significant overlap and positive correlation with the distribution of Przewalski's horses, with respective overlap rates being 90.25% in high risk, 33.79% in medium risk, and 23.09% in low risk areas. Moran's I analysis revealed a clustering trend of the fresh feces of Przewalski's horses in these areas. The GLM confirmed a positive correlation between the distribution of H. asiaticum and the presence of horse fresh feces, alongside a negative correlation with the proximity to water sources and donkey trails.</p><p><strong>Conclusions: </strong>This study reveals the strong spatial correlation between Przewalski's horses and H. asiaticum in desert grasslands, underlining the need to consider interspecific interactions in wildlife reintroductions. The findings are crucial for shaping effective strategies of wildlife conservation and maintaining ecological balance.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"61"},"PeriodicalIF":0.0,"publicationDate":"2024-05-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11088120/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140908798","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-11DOI: 10.1186/s12862-024-02251-0
K Escobedo-Quevedo, M J Lankheet, I Pen, M Trienens, H H M Helsen, B Wertheim
Background: Foraging behavior in insects is optimised for locating scattered resources in a complex environment. This behavior can be exploited for use in pest control. Inhibition of feeding can protect crops whereas stimulation can increase the uptake of insecticides. For example, the success of a bait spray, depends on either contact or ingestion, and thus on the insect finding it.
Methods: To develop an effective bait spray against the invasive pest, Drosophila suzukii, we investigated aspects of foraging behavior that influence the likelihood that the pest interacts with the baits, in summer and winter morphotypes. We video-recorded the flies' approach behavior towards four stimuli in a two-choice experiment on strawberry leaflets. To determine the most effective bait positioning, we also assessed where on plants the pest naturally forages, using a potted raspberry plant under natural environmental conditions. We also studied starvation resistance at 20 °C and 12 °C for both morphs.
Results: We found that summer morph flies spent similar time on all baits (agar, combi-protec, yeast) whereas winter morphs spent more time on yeast than the other baits. Both morphs showed a preference to feed at the top of our plant's canopy. Colder temperatures enhanced survival under starvation conditions in both morphs, and mortality was reduced by food treatment.
Conclusions: These findings on feeding behavior support informed decisions on the type and placement of a bait to increase pest control.
背景:昆虫的觅食行为可以在复杂的环境中找到分散的资源。这种行为可用于害虫控制。抑制取食可以保护农作物,而刺激取食则可以增加杀虫剂的吸收。例如,喷洒诱饵的成功与否取决于接触或摄食,从而取决于昆虫是否能发现它:为了开发一种有效的诱饵喷雾剂来对付入侵害虫--铃木果蝇,我们研究了夏季和冬季形态中影响害虫与诱饵相互作用的觅食行为的各个方面。我们通过视频记录了苍蝇在草莓小叶上的二选一实验中对四种刺激的接近行为。为了确定最有效的诱饵位置,我们还利用自然环境条件下的盆栽覆盆子植物,评估了害虫在植物上自然觅食的位置。我们还研究了两种形态在 20 °C 和 12 °C 下的抗饥饿性:结果:我们发现,夏季形态的苍蝇在所有诱饵(琼脂、combi-protec、酵母)上花费的时间相似,而冬季形态的苍蝇在酵母上花费的时间多于其他诱饵。两种形态的苍蝇都喜欢在植物冠层顶端觅食。较低的温度提高了两种形态在饥饿条件下的存活率,食物处理降低了死亡率:这些关于取食行为的研究结果有助于就诱饵的类型和放置位置做出明智的决定,从而提高害虫控制能力。
{"title":"Studying foraging behavior to improve bait sprays application to control Drosophila suzukii.","authors":"K Escobedo-Quevedo, M J Lankheet, I Pen, M Trienens, H H M Helsen, B Wertheim","doi":"10.1186/s12862-024-02251-0","DOIUrl":"10.1186/s12862-024-02251-0","url":null,"abstract":"<p><strong>Background: </strong>Foraging behavior in insects is optimised for locating scattered resources in a complex environment. This behavior can be exploited for use in pest control. Inhibition of feeding can protect crops whereas stimulation can increase the uptake of insecticides. For example, the success of a bait spray, depends on either contact or ingestion, and thus on the insect finding it.</p><p><strong>Methods: </strong>To develop an effective bait spray against the invasive pest, Drosophila suzukii, we investigated aspects of foraging behavior that influence the likelihood that the pest interacts with the baits, in summer and winter morphotypes. We video-recorded the flies' approach behavior towards four stimuli in a two-choice experiment on strawberry leaflets. To determine the most effective bait positioning, we also assessed where on plants the pest naturally forages, using a potted raspberry plant under natural environmental conditions. We also studied starvation resistance at 20 °C and 12 °C for both morphs.</p><p><strong>Results: </strong>We found that summer morph flies spent similar time on all baits (agar, combi-protec, yeast) whereas winter morphs spent more time on yeast than the other baits. Both morphs showed a preference to feed at the top of our plant's canopy. Colder temperatures enhanced survival under starvation conditions in both morphs, and mortality was reduced by food treatment.</p><p><strong>Conclusions: </strong>These findings on feeding behavior support informed decisions on the type and placement of a bait to increase pest control.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"60"},"PeriodicalIF":0.0,"publicationDate":"2024-05-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11088012/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140908805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-10DOI: 10.1186/s12862-024-02249-8
Jorge Gustavo Meso, Federico Gianechini, Kevin Leonel Gomez, Luciana Muci, Mattia Antonio Baiano, Diego Pol, Jonatan Kaluza, Alberto Garrido, Michael Pittman
The study of thirty-two shed crowns from the Portezuelo Formation (middle Turonian-late Coniacian) at the Sierra del Portezuelo locality, reveals six distinct tooth morphotypes identified through cladistic, discriminant, and cluster analyses. Two morphotypes were identified as belonging to Megaraptoridae, three to Abelisauridae, one to Abelisauroidea, and one to Alvarezsauridae. Additionally, two of the morphotypes exhibit a combination of dental features typically found in megaraptorid and abelisauridtheropods. These results suggest a greater diversity of theropods in the original ecosystem than previously thought, including the presence of a second morphotype of megaraptorid and alvarezsaurid previously undocumented in this formation. Furthermore, the existence of Morphotype 6 indicates the potential coexistence of medium-sized abelisauroids alongside larger abelisaurids in the same ecosystem. These findings underscore the importance of future expeditions to the Sierra del Portezuelo locality to further our understanding of these previously unknown theropod species.
{"title":"Shed teeth from Portezuelo formation at Sierra del Portezuelo reveal a higher diversity of predator theropods during Turonian-Coniacian times in northern Patagonia.","authors":"Jorge Gustavo Meso, Federico Gianechini, Kevin Leonel Gomez, Luciana Muci, Mattia Antonio Baiano, Diego Pol, Jonatan Kaluza, Alberto Garrido, Michael Pittman","doi":"10.1186/s12862-024-02249-8","DOIUrl":"10.1186/s12862-024-02249-8","url":null,"abstract":"<p><p>The study of thirty-two shed crowns from the Portezuelo Formation (middle Turonian-late Coniacian) at the Sierra del Portezuelo locality, reveals six distinct tooth morphotypes identified through cladistic, discriminant, and cluster analyses. Two morphotypes were identified as belonging to Megaraptoridae, three to Abelisauridae, one to Abelisauroidea, and one to Alvarezsauridae. Additionally, two of the morphotypes exhibit a combination of dental features typically found in megaraptorid and abelisauridtheropods. These results suggest a greater diversity of theropods in the original ecosystem than previously thought, including the presence of a second morphotype of megaraptorid and alvarezsaurid previously undocumented in this formation. Furthermore, the existence of Morphotype 6 indicates the potential coexistence of medium-sized abelisauroids alongside larger abelisaurids in the same ecosystem. These findings underscore the importance of future expeditions to the Sierra del Portezuelo locality to further our understanding of these previously unknown theropod species.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"59"},"PeriodicalIF":0.0,"publicationDate":"2024-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11083846/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140904619","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: Karst caves serve as natural laboratories, providing organisms with extreme and constant conditions that promote isolation, resulting in a genetic relationship and living environment that is significantly different from those outside the cave. However, research on cave creatures, especially Opiliones, remains scarce, with most studies focused on water, soil, and cave sediments.
Results: The structure of symbiotic bacteria in different caves were compared, revealing significant differences. Based on the alpha and beta diversity, symbiotic bacteria abundance and diversity in the cave were similar, but the structure of symbiotic bacteria differed inside and outside the cave. Microorganisms in the cave play an important role in material cycling and energy flow, particularly in the nitrogen cycle. Although microbial diversity varies inside and outside the cave, Opiliones in Beijing caves and Hainan Island exhibited a strong similarity, indicating that the two environments share commonalities.
Conclusions: The karst cave environment possesses high microbial diversity and there are noticeable differences among different caves. Different habitats lead to significant differences in the symbiotic bacteria in Opiliones inside and outside the cave, and cave microorganisms have made efforts to adapt to extreme environments. The similarity in symbiotic bacteria community structure suggests a potential similarity in host environments, providing an explanation for the appearance of Sinonychia martensi in caves in the north.
{"title":"Environmental specificity of karst cave habitats evidenced by diverse symbiotic bacteria in Opiliones.","authors":"Likun Zhao, Ruoyi Xiao, Shanfeng Zhang, Chao Zhang, Feng Zhang","doi":"10.1186/s12862-024-02248-9","DOIUrl":"10.1186/s12862-024-02248-9","url":null,"abstract":"<p><strong>Background: </strong>Karst caves serve as natural laboratories, providing organisms with extreme and constant conditions that promote isolation, resulting in a genetic relationship and living environment that is significantly different from those outside the cave. However, research on cave creatures, especially Opiliones, remains scarce, with most studies focused on water, soil, and cave sediments.</p><p><strong>Results: </strong>The structure of symbiotic bacteria in different caves were compared, revealing significant differences. Based on the alpha and beta diversity, symbiotic bacteria abundance and diversity in the cave were similar, but the structure of symbiotic bacteria differed inside and outside the cave. Microorganisms in the cave play an important role in material cycling and energy flow, particularly in the nitrogen cycle. Although microbial diversity varies inside and outside the cave, Opiliones in Beijing caves and Hainan Island exhibited a strong similarity, indicating that the two environments share commonalities.</p><p><strong>Conclusions: </strong>The karst cave environment possesses high microbial diversity and there are noticeable differences among different caves. Different habitats lead to significant differences in the symbiotic bacteria in Opiliones inside and outside the cave, and cave microorganisms have made efforts to adapt to extreme environments. The similarity in symbiotic bacteria community structure suggests a potential similarity in host environments, providing an explanation for the appearance of Sinonychia martensi in caves in the north.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"58"},"PeriodicalIF":0.0,"publicationDate":"2024-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11080181/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140892906","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-06DOI: 10.1186/s12862-024-02244-z
Bahareh Nowruzi, Lenka Hutarova, Dominika Vešelenyiova, James S Metcalf
Background: Complex descriptions of new strains of cyanobacteria appear very frequently. The main importance of these descriptions concerns potential new substances that they could synthesise, as well as their different properties as a result of their different ecological niches. The main gene used for these descriptions is 16 S with ITS or whole genome sequencing. Neowestiellopsis persica represents a unique example of the influence of ecology on morphological changes, with almost identical 16 S identity. Although our previously described Neowestiellopsis persica strain A1387 was characterized by 16 S analysis, we used different molecular markers to provide a way to separate strains of this genus that are closely related at the genetic level.
Materials and methods: In order to conduct an in-depth study, several molecular markers, namely psbA, rpoC1, nifD, nifH and cpcA were sequenced and studied in Neowestiellopsis persica strain A1387.
Results: The results of the phylogenetic analysis, based on cpcA, showed that the studied strain A 1387 falls into a separate clade than N. persica, indicating that this signature sequence could be a useful molecular marker for phylogenetic separation of similar strains isolated in the future.
Conclusions: Analysis of strain A1387 based on gene differences confirmed that it is a Neowestiellopsis strain. The morphological changes observed in the previous study could be due to different ecological and cultivation conditions compared to the type species. At the same time, the sequences obtained have increased our understanding of this species and will help in the future to better identify strains belonging to the genus Neowestiellopsis.
背景:关于蓝藻新菌株的复杂描述经常出现。这些描述主要涉及它们可能合成的新物质,以及它们因生态位不同而具有的不同特性。这些描述所使用的主要基因是 16 S 与 ITS 或全基因组测序。Neowestiellopsis persica 是生态对形态变化影响的一个独特例子,其 16 S 特性几乎完全相同。尽管我们之前描述的 Neowestiellopsis persica 菌株 A1387 是通过 16 S 分析鉴定的,但我们使用了不同的分子标记来提供一种方法来区分该属中在遗传水平上密切相关的菌株:为了进行深入研究,我们对 Neowestiellopsis persica 菌株 A1387 的几个分子标记,即 psbA、rpoC1、nifD、nifH 和 cpcA 进行了测序和研究:基于 cpcA 的系统进化分析结果表明,所研究的菌株 A 1387 与 N. persica 属于不同的支系,这表明该特征序列可能是未来分离出的类似菌株进行系统进化分离的有用分子标记:结论:根据基因差异对菌株 A1387 进行的分析表明,该菌株属于 Neowestiellopsis 菌株。先前研究中观察到的形态变化可能是由于生态和栽培条件与模式种不同所致。同时,所获得的序列增加了我们对该物种的了解,并将有助于今后更好地鉴定属于 Neowestiellopsis 属的菌株。
{"title":"Characterization of Neowestiellopsis persica A1387 (Hapalosiphonaceae) based on the cpcA, psbA, rpoC1, nifH and nifD gene sequences.","authors":"Bahareh Nowruzi, Lenka Hutarova, Dominika Vešelenyiova, James S Metcalf","doi":"10.1186/s12862-024-02244-z","DOIUrl":"10.1186/s12862-024-02244-z","url":null,"abstract":"<p><strong>Background: </strong>Complex descriptions of new strains of cyanobacteria appear very frequently. The main importance of these descriptions concerns potential new substances that they could synthesise, as well as their different properties as a result of their different ecological niches. The main gene used for these descriptions is 16 S with ITS or whole genome sequencing. Neowestiellopsis persica represents a unique example of the influence of ecology on morphological changes, with almost identical 16 S identity. Although our previously described Neowestiellopsis persica strain A1387 was characterized by 16 S analysis, we used different molecular markers to provide a way to separate strains of this genus that are closely related at the genetic level.</p><p><strong>Materials and methods: </strong>In order to conduct an in-depth study, several molecular markers, namely psbA, rpoC1, nifD, nifH and cpcA were sequenced and studied in Neowestiellopsis persica strain A1387.</p><p><strong>Results: </strong>The results of the phylogenetic analysis, based on cpcA, showed that the studied strain A 1387 falls into a separate clade than N. persica, indicating that this signature sequence could be a useful molecular marker for phylogenetic separation of similar strains isolated in the future.</p><p><strong>Conclusions: </strong>Analysis of strain A1387 based on gene differences confirmed that it is a Neowestiellopsis strain. The morphological changes observed in the previous study could be due to different ecological and cultivation conditions compared to the type species. At the same time, the sequences obtained have increased our understanding of this species and will help in the future to better identify strains belonging to the genus Neowestiellopsis.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"57"},"PeriodicalIF":0.0,"publicationDate":"2024-05-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11075313/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140872481","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-01DOI: 10.1186/s12862-024-02226-1
Maxime Policarpo, Laurent Legendre, Isabelle Germon, Philippe Lafargeas, Luis Espinasa, Sylvie Rétaux, Didier Casane
Background: Several studies suggested that cavefish populations of Astyanax mexicanus settled during the Late Pleistocene. This implies that the cavefish's most conspicuous phenotypic changes, blindness and depigmentation, and more cryptic characters important for cave life, evolved rapidly.
Results: Using the published genomes of 47 Astyanax cavefish from la Cueva de El Pachón, El Sótano de la Tinaja, La Cueva Chica and El Sótano de Molino, we searched for putative loss-of-function mutations in previously defined sets of genes, i.e., vision, circadian clock and pigmentation genes. Putative non-functional alleles for four vision genes were identified. Then, we searched genome-wide for putative non-functional alleles in these four cave populations. Among 512 genes with segregating putative non-functional alleles in cavefish that are absent in surface fish, we found an enrichment in visual perception genes. Among cavefish populations, different levels of shared putative non-functional alleles were found. Using a subset of 12 genes for which putative loss-of-function mutations were found, we extend the analysis of shared pseudogenes to 11 cave populations. Using a subset of six genes for which putative loss-of-function mutations were found in the El Sótano del Toro population, where extensive hybridization with surface fish occurs, we found a correlation between the level of eye regression and the amount of putative non-functional alleles.
Conclusions: We confirm that very few putative non-functional alleles are present in a large set of vision genes, in accordance with the recent origin of Astyanax mexicanus cavefish. Furthermore, the genome-wide analysis indicates an enrichment of putative loss-of-function alleles in genes with vision-related GO-terms, suggesting that visual perception may be the function chiefly impacted by gene losses related to the shift from a surface to a cave environment. The geographic distribution of putative loss-of-function alleles newly suggests that cave populations from Sierra de Guatemala and Sierra de El Abra share a common origin, albeit followed by independent evolution for a long period. It also supports that populations from the Micos area have an independent origin. In El Sótano del Toro, the troglomorphic phenotype is maintained despite massive introgression of the surface genome.
背景:一些研究表明,Astyanax mexicanus的洞穴鱼种群在晚更新世定居下来。这意味着洞穴鱼最明显的表型变化--失明和褪色,以及对洞穴生活非常重要的更隐蔽的特征都在迅速进化:结果:我们利用已发表的47条来自la Cueva de El Pachón、El Sótano de la Tinaja、La Cueva Chica和El Sótano de Molino的Astyanax洞穴鱼的基因组,在先前确定的基因(即视觉基因、昼夜节律时钟基因和色素沉着基因)中寻找推定的功能缺失突变。我们发现了四个视觉基因的假定无功能等位基因。然后,我们在全基因组范围内搜索了这四个洞穴种群中的假定无功能等位基因。在洞穴鱼中具有分离的推定非功能等位基因的 512 个基因中,我们发现视觉感知基因富集。在洞穴鱼种群中,我们发现了不同程度的共享推定非功能等位基因。利用发现推定功能缺失突变的 12 个基因子集,我们将共享假基因的分析扩展到 11 个洞穴鱼种群。在与表层鱼类发生广泛杂交的 El Sótano del Toro 种群中,我们利用发现了推测功能缺失突变的 6 个基因子集,发现眼睛退化程度与推测非功能等位基因的数量之间存在相关性:结论:我们证实,在大量视觉基因中存在极少量的推定非功能等位基因,这与墨西哥洞穴石首鱼(Astyanax mexicanus cavefish)的近代起源相符。此外,全基因组分析表明,推定功能缺失等位基因富集在与视觉相关的GO-terms基因中,这表明视觉感知可能是基因缺失主要影响的功能,而基因缺失与从地表环境到洞穴环境的转变有关。推测的功能缺失等位基因的地理分布新近表明,危地马拉山脉和阿布拉山脉的洞穴种群具有共同的起源,尽管其后经历了长期的独立进化。这也证明米科斯地区的种群具有独立的起源。在 El Sótano del Toro,尽管地表基因组发生了大规模的引入,但蛙人的表型仍得以保持。
{"title":"The nature and distribution of putative non-functional alleles suggest only two independent events at the origins of Astyanax mexicanus cavefish populations.","authors":"Maxime Policarpo, Laurent Legendre, Isabelle Germon, Philippe Lafargeas, Luis Espinasa, Sylvie Rétaux, Didier Casane","doi":"10.1186/s12862-024-02226-1","DOIUrl":"10.1186/s12862-024-02226-1","url":null,"abstract":"<p><strong>Background: </strong>Several studies suggested that cavefish populations of Astyanax mexicanus settled during the Late Pleistocene. This implies that the cavefish's most conspicuous phenotypic changes, blindness and depigmentation, and more cryptic characters important for cave life, evolved rapidly.</p><p><strong>Results: </strong>Using the published genomes of 47 Astyanax cavefish from la Cueva de El Pachón, El Sótano de la Tinaja, La Cueva Chica and El Sótano de Molino, we searched for putative loss-of-function mutations in previously defined sets of genes, i.e., vision, circadian clock and pigmentation genes. Putative non-functional alleles for four vision genes were identified. Then, we searched genome-wide for putative non-functional alleles in these four cave populations. Among 512 genes with segregating putative non-functional alleles in cavefish that are absent in surface fish, we found an enrichment in visual perception genes. Among cavefish populations, different levels of shared putative non-functional alleles were found. Using a subset of 12 genes for which putative loss-of-function mutations were found, we extend the analysis of shared pseudogenes to 11 cave populations. Using a subset of six genes for which putative loss-of-function mutations were found in the El Sótano del Toro population, where extensive hybridization with surface fish occurs, we found a correlation between the level of eye regression and the amount of putative non-functional alleles.</p><p><strong>Conclusions: </strong>We confirm that very few putative non-functional alleles are present in a large set of vision genes, in accordance with the recent origin of Astyanax mexicanus cavefish. Furthermore, the genome-wide analysis indicates an enrichment of putative loss-of-function alleles in genes with vision-related GO-terms, suggesting that visual perception may be the function chiefly impacted by gene losses related to the shift from a surface to a cave environment. The geographic distribution of putative loss-of-function alleles newly suggests that cave populations from Sierra de Guatemala and Sierra de El Abra share a common origin, albeit followed by independent evolution for a long period. It also supports that populations from the Micos area have an independent origin. In El Sótano del Toro, the troglomorphic phenotype is maintained despite massive introgression of the surface genome.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"24 1","pages":"41"},"PeriodicalIF":0.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10983663/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140332289","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}