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Response of soil nematode communities in Stipa baicalensis meadow steppe to mowing frequencies. 黄芩针茅草甸草原土壤线虫群落对刈割频率的响应
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-20 DOI: 10.1186/s12862-025-02444-1
Renheng Wu, Zhendan Wu, Yaling Zhang, He Ye, Dianlin Yang, Mei Hong

Soil nematodes are essential indicator of organisms for assessing the health of grassland ecosystems, and their community structure is sensitive to changes in grassland utilization practices. However, there is still a lack of research on how long different mowing frequencies affect the characteristics of soil nematode communities. Therefore, this study aimed to address this gap by studying the impacts of different mowing frequencies M1, M2, and M3 on the nematode community structure and metabolic footprints. The results showed that a total of 45,320 soil nematodes were captured in the experimental area. Among them, the most dominant genera were Cervidellus and Acrobeloides (23.84%), and the dominant genera were Nygolaimus, Chiloplacus and Cephalobus (20.57%). Compared with no mowing treatment, the total abundance of soil nematodes and the abundance of each trophic group showed inflection points in the M2 treatment. The life history of nematode community tended to be k-strategist, and the Wasilewska index was > 1, indicating that soil microbivores were sensitive to the environment and the soil mineralization pathway did not change. NCR value was > 0.5, indicating that the decomposition of grassland organic matter is still dominated by bacterial and fungal channels, which is not affected by mowing frequency. In addition, Soil pH and ammonium nitrogen (NH4+-N) are environmental factors that affect nematode communities. In summary, M2 treatment can increase nematode diversity and metabolic activity, improve anti-interference and soil health, and promote soil food web maturation. It is the best cutting frequency for grassland soil health, and has potential benefits for grassland restoration.

土壤线虫是评价草地生态系统健康的重要生物指标,其群落结构对草地利用方式的变化非常敏感。然而,对于不同刈割频率对土壤线虫群落特征的影响,目前还缺乏研究。因此,本研究旨在通过研究不同刈割频率M1、M2和M3对线虫群落结构和代谢足迹的影响来弥补这一空白。结果表明,试验区共捕获土壤线虫45320只。其中,优势属为Cervidellus和Acrobeloides(23.84%),优势属为Nygolaimus、Chiloplacus和Cephalobus(20.57%)。与不割草处理相比,M2处理土壤线虫总丰度和各营养类群丰度均出现拐点。线虫群落生活史倾向于k-战略型,Wasilewska指数为bb0.1,表明土壤微生物对环境敏感,土壤矿化途径未发生变化。NCR值为bb0 0.5,表明草地有机质的分解仍以细菌和真菌通道为主,不受刈割频率的影响。此外,土壤pH和铵态氮(NH4+-N)是影响线虫群落的环境因子。综上所述,M2处理可以增加线虫多样性和代谢活性,改善土壤的抗干扰性和健康,促进土壤食物网成熟。这是草地土壤健康的最佳采伐频率,对草地恢复具有潜在的效益。
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引用次数: 0
Evolutionary trends in the vertebral morphology of extant Delphinidae. 现存飞燕科脊椎形态的进化趋势。
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-17 DOI: 10.1186/s12862-025-02457-w
M C Marchesi, E E S Pereyra, M A Coscarella, R Gonzalez-José

Background: Vertebral morphology in cetaceans is linked to various functional abilities that promote ecological diversity and adaptive radiation. While morphometric studies have examined vertebral shape evolution, few have quantified evolutionary trends in a phylogenetic framework. Here, we used three-dimensional landmark configurations and phylogenetic comparative methods to investigate how the vertebral morphology of Delphinidae is influenced by phylogenetic constraints, ecological adaptation, and allometric effects and how these influences vary along the vertebral column.

Results: Phylogenetic ordination methods revealed that species with particular habitat requirements differ greatly from their closest relatives, exhibiting biomechanically advantageous vertebral shapes. A comparison of the orientations of these ordination methods, phylogenetic ANOVAs and phylogenetic signal tests revealed that vertebral morphology is affected by overlapping allometric, ecologic, and phylogenetic signals, with their relative importance differing across regions, phylogenetic levels, and dimensions of shape. In the anterior thorax, the posterior thorax, and the synclinal point, diversification was associated primarily with size and habitat, resulting in low phylogenetic signals. Conversely, the mid-torso and tail stock retain strong phylogenetic signals, reflecting subfamily level conservatism. Notably, in the Tm region, the ecological demands for fast swimming remain highly relevant to vertebral morphology, emphasising the functional significance of this region.

Conclusion: Vertebral morphology in Delphinidae may reflect a complex interplay of ecological, allometric and phylogenetic influences, with distinct regions evolving under different combinations of selective and historical constraints. These region-specific patterns highlight the modularity of the vertebral column and provide new insights into the adaptive radiation of oceanic dolphins. Further studies, including evolutionary modelling and considering intraspecific variation, will be essential to fully understand macroevolutionary trends in vertebral morphology and their implications for axial locomotion.

背景:鲸类动物的脊椎形态与促进生态多样性和适应辐射的各种功能能力有关。虽然形态计量学研究已经检查了椎体形状的进化,但很少有人在系统发育框架中量化进化趋势。在这里,我们使用三维地标配置和系统发育比较方法来研究飞鸽科脊椎形态如何受到系统发育约束、生态适应和异速生长效应的影响,以及这些影响如何沿着脊柱变化。结果:系统发育排序方法显示,具有特定栖息地要求的物种与其近亲有很大差异,表现出生物力学上有利的椎体形状。对这些排序方法、系统发育方差分析和系统发育信号测试的方向比较表明,椎体形态受到重叠异速生长、生态和系统发育信号的影响,其相对重要性在不同区域、系统发育水平和形状维度上有所不同。在前胸、后胸和向斜点,多样化主要与大小和栖息地有关,导致低系统发育信号。相反,躯干中部和尾部保留了很强的系统发育信号,反映了亚家族水平的保守性。值得注意的是,在Tm区域,快速游泳的生态需求仍然与椎体形态高度相关,强调了该区域的功能意义。结论:飞鸽科脊椎形态可能反映了生态、异速生长和系统发育影响的复杂相互作用,不同区域在不同的选择和历史约束组合下进化。这些区域特定的模式突出了脊柱的模块化,并为海洋海豚的适应性辐射提供了新的见解。进一步的研究,包括进化建模和考虑种内变异,对于充分理解椎体形态的宏观进化趋势及其对轴向运动的影响至关重要。
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引用次数: 0
Citizen science data reveals widespread sexual dichromatism in the European fire salamander (Salamandra salamandra). 公民科学数据揭示了在欧洲火蝾螈(Salamandra Salamandra)中广泛存在的性别二色性。
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-14 DOI: 10.1186/s12862-025-02461-0
Max Mühlenhaupt, Rosalie Hey, Michelle Starp, Nils Anthes, Paul Bachhausen, Thomas Bamann, Sabrina Bleidißel, Eike Bovensmann, Jürgen Braunsdorf, J Maximilian Dehling, Saskia Ebert, Hannes Egle, Karolin Egle, Simeon Egle, Heidi Enderlein, Maximilian Fischer, Lara Gemeinhardt, Sean G Grond, Ricarda D Gundert, Oliver Krüger, Lorenz Laux, Pia Oswald, Xenia Schlindwein, Manuela Schmidt, Laura Schulte, Ronny Schwalbe, Theresa Stipp, Michael Veith, Frederik Wietbrok, Barbara A Caspers

Background: Conspicuous color patterns are traditionally believed to advertise the toxicity of prey to potential predators. However, many aposematic species show drastic variation in coloration, indicating the possibility of other functions of coloration such as intraspecific communication. To study these other functions, we can investigate the influence of intrinsic (e.g., sex) and external factors (e.g., climate) on color variation. We used the aposematic European fire salamander (Salamandra salamandra) to study drivers of variation in the yellow-to-black ratio of the dorsal coloration based on citizen science data available in a new online database.

Results: Our results suggest a widespread sexual dichromatism in fire salamanders in Germany with males displaying a larger yellow-to-black ratio, i.e. are more yellow, than females. This dichromatism persisted even after correcting for a sex-difference in body shape that accounts for some of the variation in the yellow-to-black ratio. Among six investigated putative drivers of this color variation, the proportion of the aposematic yellow coloration increased with latitude but showed no association with other environmental variables such as temperature or the productivity of the habitat.

Conclusions: Integrating citizen science data in this study enabled a comparison of fire salamander populations across large parts of their distribution and highlights widespread sexual dichromatism. Future studies should further investigate potential mechanisms of mate choice in fire salamanders and other selective forces on coloration such as differential predation pressure between both sexes or the role in crypsis. Lastly, multi-national studies supported by citizen science data could fully unravel the extent of color variation in this species.

背景:传统上认为显眼的颜色图案可以向潜在的捕食者表明猎物的毒性。然而,许多警告物种在颜色上表现出巨大的变化,表明颜色可能具有其他功能,如种内交流。为了研究这些其他功能,我们可以研究内在因素(如性别)和外部因素(如气候)对颜色变化的影响。我们使用欧洲火蝾螈(Salamandra Salamandra)来研究背部颜色黄黑比变化的驱动因素,这是基于一个新的在线数据库中提供的公民科学数据。结果:我们的研究结果表明,在德国火蝾螈中存在广泛的性别二色性,雄性火蝾螈的黄色与黑色比例较大,即比雌性火蝾螈更黄。这种二色性甚至在校正了造成黄黑比变化的体型性别差异后仍然存在。在被调查的6个可能的颜色变化驱动因素中,警告黄色的比例随着纬度的增加而增加,但与其他环境变量(如温度或栖息地的生产力)没有关联。结论:在本研究中整合了公民科学数据,使火蝾螈种群在其分布的大部分地区进行了比较,并突出了广泛的性别二色性。未来的研究应该进一步研究火蜥蜴择偶的潜在机制和其他选择颜色的力量,如两性之间不同的捕食压力或在隐藏中的作用。最后,由公民科学数据支持的多国研究可以充分揭示该物种颜色变化的程度。
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引用次数: 0
CODABEILLES: a reliable reference library of COI DNA barcodes for French wild bees monitoring (Apoidea: Anthophila). CODABEILLES:为法国野蜂监测提供可靠的COI DNA条形码参考库。
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-13 DOI: 10.1186/s12862-025-02429-0
Mélodie Ollivier, Anaïs Marquisseau, Eric Dufrêne, Rémi Rudelle, Rodolphe Rougerie, Adrien Perrard, Magalie Pichon
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引用次数: 0
Genetic diversity and spatial genetic structure of Caucasian apple (Malus orientalis Uglitzk.) populations based on microsatellite markers for conservation strategy. 基于微卫星标记保护策略的高加索苹果群体遗传多样性和空间遗传结构
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-10 DOI: 10.1186/s12862-025-02474-9
Hamid Bina, Farrokh Ghahremaninejad, Shahin Zarre, Fatemeh Moein

An important tree in Eurasia, Malus orientalis Uglitzk. (Caucasian apple) provides ecological and economic benefits. To evaluate the genetic diversity of this species, we sampled 167 individuals from 20 populations across the Zagros Mountains (6 populations) and Hyrcanian forests (14 populations). We assessed six quantitative morphological traits and employed 26 microsatellite (SSR) markers, which revealed a total of 455 alleles in the wild apple populations, all of which were polymorphic. The markers revealed mean values for genetic diversity indices, including allelic richness (Ar = 0.21), private alleles (Ap = 0.65), expected heterozygosity (HE = 0.74), and observed heterozygosity (HO = 0.71). Our analyses identified three major genetic clusters and two significant genetic barriers among the studied populations. Estimations of gene flow indicated limited connectivity among M. orientalis populations in the Caucasus region, suggesting habitat fragmentation as a key factor shaping genetic structure. Based on genetic diversity assessments, two areas within the Hyrcanian forest (Siamarzkoh region, Tokestan region, Abesk region, Asalem region) and one in the Zagros forest (Sepedkoh region) were identified as priority regions for conservation efforts to protect this valuable species.

欧亚大陆的一种重要乔木,东方苹果。(高加索苹果)具有生态效益和经济效益。为了评估该物种的遗传多样性,我们在Zagros山脉(6个种群)和hycanian森林(14个种群)的20个种群中采集了167个个体。利用26个微卫星(SSR)标记,分析了6个数量形态性状,共发现455个等位基因,均为多态。等位基因丰富度(Ar = 0.21)、私有等位基因(Ap = 0.65)、期望杂合度(HE = 0.74)、观察杂合度(HO = 0.71)等遗传多样性指标均为平均值。我们的分析在研究人群中确定了三个主要的遗传集群和两个显著的遗传障碍。基因流估计表明高加索地区东方桦种群间的连通性有限,表明生境破碎化是形成遗传结构的关键因素。基于遗传多样性评估,hycanian森林中的两个区域(Siamarzkoh地区、Tokestan地区、Abesk地区、Asalem地区)和Zagros森林中的一个区域(Sepedkoh地区)被确定为保护这一珍贵物种的优先区域。
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引用次数: 0
Correction: Climatic data sources and limitations of ecological niche models impact the estimations of historical ranges and niche overlaps in distantly related Korean salamanders. 更正:气候数据来源和生态位模型的局限性影响了远亲大鲵历史范围和生态位重叠的估计。
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-10 DOI: 10.1186/s12862-025-02467-8
Yucheol Shin, Amaël Borzée, Daesik Park
{"title":"Correction: Climatic data sources and limitations of ecological niche models impact the estimations of historical ranges and niche overlaps in distantly related Korean salamanders.","authors":"Yucheol Shin, Amaël Borzée, Daesik Park","doi":"10.1186/s12862-025-02467-8","DOIUrl":"10.1186/s12862-025-02467-8","url":null,"abstract":"","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"25 1","pages":"119"},"PeriodicalIF":2.6,"publicationDate":"2025-11-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12599067/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145491083","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative analysis of complete mitochondrial genomes of fourteen moray eels (Anguilliformes: Muraenidae) and primary exploration of their phylogenetic relationship and temperature adaptation. 14条海鳗(鳗鲡目:鳗科)线粒体全基因组的比较分析及其系统发育关系和温度适应的初步探讨。
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-06 DOI: 10.1186/s12862-025-02417-4
Wei Tan, Fuxiao Chen, Yongbo Wang, Rongxia Wang, Shuyuan Fu, Shengtao Guo, Hongtao Liu

Moray eels (Anguilliformes: Muraenidae) are commonly found in subtropical and tropical waters, where they favor sheltered habitats and occasionally exhibit aggressive behavior. Nowadays, mitochondrial genomes (mitogenomes) information of moray eels remains poorly understood, and analysis of gene re-arrangements and evolutionary history within Anguilloidei remain largely unknown. In this study, mitochondrial genomes from 12 Gymnothorax spp. and 2 Echidna spp species were sequenced, assembled and annotated, and most of which were not published before. Our results showed that the mitochondrial genomes of the 14 species were approximately 16.5 kb in length, with GC content ranging from 41.1 to 46.1%. The mitochondrial genomes of these 12 Gymnothorax spp. and 2 Echidna spp are circular molecules that encode a total of 37 genes, including 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA (small and large subunit rRNA encoding genes) and a non-coding control region (CR). In addition, three types of gene arrangement have been identified for the first time in the mitogenomes of Anguilloidei. Phylogenetic relationships of 51 moray eel mitogenomes based on the protein-coding genes indicate that mitogenome sequences reveals the higher-order relationships of different Anguilloidei. Gene order and phylogenetic data are valuable for elucidating the evolutionary connections among various Anguilloidei species. Cox3 exhibited the smallest non-synonymous mutation value among all the 13 protein-coding genes, indicating that the role of Cox3 in maintaining energy metabolism under warm water conditions is a hypothesis based on observed evolutionary conservation. The complete information of mitogenomes in these 12 Gymnothorax spp. and 2 Echidna spp species provides genetic markers for species identification and temperature adaptation studies in Anguilloidei.

海鳗(鳗鲡目:鳗科)常见于亚热带和热带水域,在那里它们喜欢庇护的栖息地,偶尔会表现出攻击行为。目前,人们对海鳗的线粒体基因组(mitogenome)信息了解甚少,对海鳗基因重排和进化历史的分析也知之甚少。本研究对12种裸鼠(Gymnothorax spp.)和2种针鼹(Echidna spp.)的线粒体基因组进行了测序、组装和注释,其中大部分未发表过。结果表明,14个物种的线粒体基因组长度约为16.5 kb, GC含量在41.1 ~ 46.1%之间。12只裸鼠和2只针鼹的线粒体基因组为环状分子,共编码37个基因,包括13个蛋白质编码基因(PCGs)、22个tRNA基因、2个rRNA(小亚基和大亚基rRNA编码基因)和1个非编码控制区(CR)。此外,在鳗鲡有丝分裂基因组中首次鉴定出三种类型的基因排列。基于蛋白质编码基因的51个海鳗有丝分裂基因组的系统发育关系表明,有丝分裂基因组序列揭示了不同鳗鲡科之间的高阶亲缘关系。基因顺序和系统发育数据对阐明鳗科各物种间的进化联系具有重要价值。Cox3在所有13个蛋白质编码基因中表现出最小的非同义突变值,这表明Cox3在温水条件下维持能量代谢的作用是基于观察到的进化守恒的假设。这12种裸子胸和2种针鼹有丝分裂基因组的完整信息为鳗鲡科的物种鉴定和温度适应研究提供了遗传标记。
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引用次数: 0
Forelimb motion and reciprocation mediate aerodynamic control in a gliding lizard. 前肢运动和往复式调节滑翔蜥蜴的空气动力学控制。
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-06 DOI: 10.1186/s12862-025-02419-2
Erik A Sathe, Robert Dudley

Background: The origin of the flight stroke in vertebrate flight evolution remains obscure. However, using forelimbs to control aerodynamic forces while gliding provides a possible exaptation from which wingless taxa evolved incipient wing flapping and powered flight. We used flat-tailed house geckos (Hemidactylus platyurus) to model the possible dynamics of those gliding taxa ancestral to vertebrate flyers, and characterized their limb and body kinematics while gliding in a vertical wind tunnel, so as to determine biomechanical consequences of forelimb movements during controlled aerial behavior.

Results: Geckos mostly assumed a stereotypical skydiving posture but intermittently would flex the body ventrally as the forelimbs were retracted posteriorly. Shoulder retraction, spinal column flexion, and subsequent translational velocity in the vertical and cranial directions were positively correlated; such alteration of body posture with simultaneous forelimb displacement thus modulates the directions and magnitudes of aerodynamic forces, including horizontal thrust production. Independent of shoulder retraction and body bend, body pitch correlated positively with vertical acceleration and negatively with horizontal acceleration.

Conclusions: Gliding geckos actively use their forelimbs to alter body speed and to generate thrust, suggesting aerodynamic function for limb displacement and reciprocation in the absence of wings. Prior to the origin of the flapping of winglike structures, analogous forelimb motions (including symmetric reciprocation) may have thus provided biomechanical advantage in the evolution of volant vertebrates.

背景:在脊椎动物的飞行进化中,飞行动作的起源仍然不清楚。然而,在滑翔时使用前肢来控制空气动力,为无翼类群进化出早期的扑翼和动力飞行提供了可能。以平尾壁虎(Hemidactylus platyurus)为研究对象,模拟了它们在垂直风洞中滑翔时的肢体和身体运动学特征,以确定在受控飞行行为中前肢运动的生物力学后果。结果:壁虎多为典型的跳伞姿势,但前肢后缩时,壁虎会间歇性地向腹侧弯曲。肩回缩、脊柱屈曲以及随后的垂直和颅向平动速度呈正相关;这种身体姿势的改变同时伴有前肢位移,从而调节了气动力的方向和大小,包括水平推力的产生。身体俯仰与垂直加速度成正相关,与水平加速度成负相关,不受肩部收缩和身体弯曲的影响。结论:滑翔壁虎主动使用前肢来改变身体速度和产生推力,这表明在没有翅膀的情况下,壁虎具有肢体位移和往复运动的气动功能。在翼状结构的拍打起源之前,类似的前肢运动(包括对称往复运动)可能因此在游动脊椎动物的进化中提供了生物力学优势。
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引用次数: 0
Evidence for the evolution of male and female cardinals' plumage colouration being affected by both natural and sexual selection. 雄性和雌性红雀羽毛颜色的进化受到自然选择和性选择的影响。
IF 2.6 Q2 ECOLOGY Pub Date : 2025-11-06 DOI: 10.1186/s12862-025-02459-8
Natália S Porzio, Paulo G Mota
{"title":"Evidence for the evolution of male and female cardinals' plumage colouration being affected by both natural and sexual selection.","authors":"Natália S Porzio, Paulo G Mota","doi":"10.1186/s12862-025-02459-8","DOIUrl":"10.1186/s12862-025-02459-8","url":null,"abstract":"","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"25 1","pages":"116"},"PeriodicalIF":2.6,"publicationDate":"2025-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12590758/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145454188","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Predicting habitat suitability of Dalbergia latifolia Roxb. (Indian rosewood) using MaxEnt: implications for conservation and sustainable forest management. 黄檀生境适宜性预测。(印度红木)利用MaxEnt:对保护和可持续森林管理的影响。
IF 2.6 Q2 ECOLOGY Pub Date : 2025-10-30 DOI: 10.1186/s12862-025-02446-z
T N Manohara, S V Pasha, B Swarada, S M Balakrishna
{"title":"Predicting habitat suitability of Dalbergia latifolia Roxb. (Indian rosewood) using MaxEnt: implications for conservation and sustainable forest management.","authors":"T N Manohara, S V Pasha, B Swarada, S M Balakrishna","doi":"10.1186/s12862-025-02446-z","DOIUrl":"10.1186/s12862-025-02446-z","url":null,"abstract":"","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"25 1","pages":"115"},"PeriodicalIF":2.6,"publicationDate":"2025-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12573975/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145411094","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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BMC ecology and evolution
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