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Development of a Novel Mitochondrial Dysfunction-Related Alzheimer's Disease Diagnostic Model Using Bioinformatics and Machine Learning. 利用生物信息学和机器学习开发一种新的线粒体功能障碍相关的阿尔茨海默病诊断模型。
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050353736241218054012
Kuo Zhang, Kai Yang, Gongchang Yu, Bin Shi

Introduction: Alzheimer's disease (AD) represents the most common neurodegenerative disorder, characterized by progressive cognitive decline and memory loss. Despite the recognition of mitochondrial dysfunction as a critical factor in the pathogenesis of AD, the specific molecular mechanisms remain largely undefined.

Methods: This study aimed to identify novel biomarkers and therapeutic strategies associated with mitochondrial dysfunction in AD by employing bioinformatics combined with machine learning methodologies. We performed Weighted Gene Co-expression Network Analysis (WGCNA) utilizing gene expression data from the NCBI Gene Expression Omnibus (GEO) database and isolated mitochondria-related genes through the MitoCarta3.0 database. By intersecting WGCNA-derived module genes with identified mitochondrial genes, we compiled a list of 60 mitochondrial dysfunction- related genes (MRGs) significantly enriched in pathways pertinent to mitochondrial function, such as the citrate cycle and oxidative phosphorylation.

Results: Employing machine learning techniques, including random forest and LASSO, along with the CytoHubba algorithm, we identified key genes with strong diagnostic potential, such as ACO2, CS, MRPS27, SDHA, SLC25A20, and SYNJ2BP, verified through ROC analysis. Furthermore, an interaction network involving miRNA-MRGs-transcription factors and a protein-drug interaction network revealed potential therapeutic compounds such as Congo red and kynurenic acid that target MRGs.

Conclusion: These findings delineate the intricate role of mitochondrial dysfunction in AD and highlight promising avenues for further exploration of biomarkers and therapeutic interventions in this devastating disease.

阿尔茨海默病(AD)是最常见的神经退行性疾病,以进行性认知能力下降和记忆丧失为特征。尽管认识到线粒体功能障碍是AD发病的关键因素,但具体的分子机制仍未明确。方法:本研究旨在利用生物信息学与机器学习相结合的方法,识别与AD线粒体功能障碍相关的新型生物标志物和治疗策略。我们利用NCBI Gene expression Omnibus (GEO)数据库中的基因表达数据进行加权基因共表达网络分析(Weighted Gene Co-expression Network Analysis, WGCNA),并通过MitoCarta3.0数据库分离线粒体相关基因。通过将wgna衍生的模块基因与已鉴定的线粒体基因交叉,我们编制了60个线粒体功能障碍相关基因(MRGs)的列表,这些基因显著富集于与线粒体功能相关的途径,如柠檬酸循环和氧化磷酸化。结果:采用随机森林、LASSO等机器学习技术,结合CytoHubba算法,鉴定出ACO2、CS、MRPS27、SDHA、SLC25A20、SYNJ2BP等具有较强诊断潜力的关键基因,并通过ROC分析进行验证。此外,涉及mirna -MRGs-转录因子的相互作用网络和蛋白质-药物相互作用网络揭示了靶向MRGs的潜在治疗化合物,如刚果红和犬尿酸。结论:这些发现描述了线粒体功能障碍在AD中的复杂作用,并为进一步探索这种毁灭性疾病的生物标志物和治疗干预提供了有希望的途径。
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引用次数: 0
Proposed Therapeutic Strategy to Combat Alzheimer's Disease by Targeting Beta and Gamma Secretases. 通过靶向β和γ分泌酶来对抗阿尔茨海默病的拟议治疗策略。
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050380899250602042028
Deepak Kumar, Piyush Anand, Shashi Kant Singh

Alzheimer's disease (AD) is a degenerative neurological disease characterized by a loss of memory and cognitive ability. One of the main factors influencing the development of AD is the accumulation of amyloid β (Aβ) plaque in the brain. The sequential production of Aβ is mediated by two enzymes: gamma-secretase and β-secretase (BACE1). The goal of beta-secretase inhibitors is to prevent the initial cleavage of amyloid precursor protein (APP), which reduces the production of (Aβ) peptides by limiting the substrate available for gamma-secretase. Simultaneously, gamma-secretase modulators are engineered to specifically modify enzyme performance, reducing the synthesis of the harmful Aβ42 isoform while maintaining vital physiological processes. Targeting both secretases reduces amyloidogenic processing synergistically. Selective inhibitors, which have been recently developed, have also shown good clinical development. They can reduce Aβ levels effectively with minimal side effects. The therapeutic strategy also underlines the importance of early therapy intervention in the preclinical AD phase for an optimum effect. Although there are some problems in the optimization of drug delivery and the alleviation of side effects, targeting beta and gamma secretases remains a promising direction. However, all these strategies still need more research and clinical testing to improve existing treatments and develop new, efficient Alzheimer's disease therapies. This review seeks to examine the therapeutic promise of β- and γ-secretase inhibition in Alzheimer's disease and review recent progress, challenges, and new dual-inhibition approaches.

阿尔茨海默病(AD)是一种以记忆和认知能力丧失为特征的退行性神经系统疾病。影响AD发展的主要因素之一是大脑中β淀粉样蛋白(Aβ)斑块的积累。Aβ的序列产生是由两种酶介导的:γ分泌酶和β分泌酶(BACE1)。β -分泌酶抑制剂的目的是防止淀粉样前体蛋白(APP)的初始裂解,通过限制γ -分泌酶的底物来减少淀粉样β肽的产生。同时,γ -分泌酶调节剂被设计成专门改变酶的性能,减少有害的a- β42异构体的合成,同时维持重要的生理过程。靶向两种分泌酶可协同减少淀粉样变性过程。近年来发展起来的选择性抑制剂也显示出良好的临床发展。它们可以有效地降低Aβ水平,副作用最小。该治疗策略还强调了在临床前AD阶段进行早期治疗干预以获得最佳效果的重要性。虽然在优化给药和减轻副作用方面存在一些问题,但靶向β和γ分泌酶仍然是一个有希望的方向。然而,所有这些策略仍然需要更多的研究和临床试验来改进现有的治疗方法,并开发新的、有效的阿尔茨海默病治疗方法。本综述旨在探讨β-和γ-分泌酶抑制在阿尔茨海默病中的治疗前景,并综述最近的进展、挑战和新的双抑制方法。
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引用次数: 0
Comprehending Alzheimer's Disease: Molecular Mechanisms and Treatment Strategies. 认识阿尔茨海默病:分子机制和治疗策略。
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050368798250626075628
Sunny Rathee, Vishal Pandey, Sakshi Soni, Debasis Sen, Sanjay K Jain

Alzheimer's disease (AD) is a complex neurodegenerative disorder and a growing global health challenge, driven by increasing life expectancy and an aging population. This review provides a comprehensive exploration of AD pathophysiology, integrating current hypotheses such as the amyloid cascade, tau protein pathology, cholinergic dysfunction, neuroinflammation, vascular contributions, and potential infection-related mechanisms. The multifactorial etiology of AD, encompassing genetic predispositions and environmental factors, underscores its intricate nature. This study delves into the diagnostic advancements, including the identification and utilization of biomarkers for early detection and disease monitoring. Therapeutic approaches are critically evaluated, highlighting anti-amyloid and anti-tau strategies, alongside emerging innovations in stem cell therapy and nanobiotechnology. A detailed examination of clinical trials offers insights into the achievements and setbacks of translating research into effective treatments. By synthesizing epidemiological trends, molecular mechanisms, and therapeutic developments, this review aims to advance our understanding of AD and foster collaborative efforts to develop transformative solutions. It emphasizes the urgency of addressing this multifaceted disease, presenting a nuanced perspective on its complexity while illuminating future directions for research and clinical practice.

阿尔茨海默病(AD)是一种复杂的神经退行性疾病,在预期寿命延长和人口老龄化的推动下,是一项日益严重的全球健康挑战。本文综述了阿尔茨海默病的病理生理学,整合了目前的假说,如淀粉样蛋白级联、tau蛋白病理、胆碱能功能障碍、神经炎症、血管贡献和潜在的感染相关机制。阿尔茨海默病的多因素病因,包括遗传易感性和环境因素,强调了其复杂的性质。本研究深入探讨了诊断的进展,包括识别和利用生物标志物进行早期检测和疾病监测。治疗方法被严格评估,突出抗淀粉样蛋白和抗tau策略,以及干细胞治疗和纳米生物技术的新兴创新。临床试验的详细检查提供了对将研究转化为有效治疗的成就和挫折的见解。通过综合流行病学趋势、分子机制和治疗进展,本综述旨在促进我们对阿尔茨海默病的理解,并促进合作开发变革性解决方案。它强调了解决这一多方面疾病的紧迫性,在阐明未来研究和临床实践方向的同时,对其复杂性提出了细致入微的观点。
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引用次数: 0
Network Pharmacology of miR-146a-5p as a Potential Anti-Inflammatory Agent in Preventing Alzheimer's Disease. miR-146a-5p作为潜在抗炎剂预防阿尔茨海默病的网络药理学研究
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050383519250825060815
Sinjye Lee, Jhibiau Foo, Yokekeong Yong, Qihao Daniel Looi, Yinyin Ooi

Introduction: Alzheimer's disease is expressed as chronic neuroinflammation in the brain, which results in neuronal dysfunction, aberrant protein folding, and declining cognitive abilities. miR-146a-5p is a potent anti-inflammatory agent that can attenuate several inflammatory diseases and promote wound healing. Our research aimed to utilize network pharmacology to elucidate the therapeutic potential of miR-146a-5p in treating Alzheimer's disease using a biocomputational approach.

Method: Alzheimer's disease genes were extracted from DisGeNET, OMIM, and GeneCards databases. At the same time, miR-146a-5p candidate genes were sourced from four prediction databases: miRDB, miRWalk, miRNet, and TargetScan.

Results: The overlap between miR-146a-5p and Alzheimer's disease genes was established using STRING, with a score greater than 0.9, revealing a total of 157 nodes in the compound-target disease network.

Discussions: Pathway enrichment analysis further revealed key candidate genes associated with Alzheimer's, including those involved in neuronal death, leukocyte migration, and axon development. EGFR, IL6, NFKB1, TLR4, CXCL8, FN1, CXCR4, and BCL2 were pinpointed as the top 8 key candidate genes of miR-146a-5p. Between these key candidate genes, the miR-146a-5p Regulatory Network also demonstrated that miR-146a-5p downregulates EGFR and CXCR4. Furthermore, this research revealed the regulatory network of miR-146a-5p, which modulates the transcriptional activities of IL6, NFKB1, TLR4, CXCL8, FN1, and BCL2.

Conclusion: Therefore, the current network pharmacology study explored the principal mechanism behind the anti-inflammatory effects of miR-146a-5p in treating Alzheimer's disease, and potentially to be applied to other neurodegenerative diseases.

简介:阿尔茨海默病表现为大脑的慢性神经炎症,导致神经元功能障碍,蛋白质折叠异常,认知能力下降。miR-146a-5p是一种有效的抗炎剂,可用于治疗多种炎症性疾病,并促进伤口愈合。我们的研究旨在利用网络药理学来阐明miR-146a-5p在使用生物计算方法治疗阿尔茨海默病中的治疗潜力。方法:从DisGeNET、OMIM和GeneCards数据库中提取阿尔茨海默病基因。同时,从miRDB、miRWalk、miRNet和TargetScan四个预测数据库中获取miR-146a-5p候选基因。结果:使用STRING建立miR-146a-5p与阿尔茨海默病基因的重叠,评分大于0.9,共揭示了复合靶点疾病网络中的157个节点。讨论:途径富集分析进一步揭示了与阿尔茨海默病相关的关键候选基因,包括那些参与神经元死亡、白细胞迁移和轴突发育的基因。EGFR、IL6、NFKB1、TLR4、CXCL8、FN1、CXCR4和BCL2被确定为miR-146a-5p的前8个关键候选基因。在这些关键候选基因之间,miR-146a-5p调控网络也证明了miR-146a-5p下调EGFR和CXCR4。此外,本研究揭示了miR-146a-5p的调控网络,miR-146a-5p可调节IL6、NFKB1、TLR4、CXCL8、FN1和BCL2的转录活性。结论:因此,目前的网络药理学研究探索了miR-146a-5p治疗阿尔茨海默病抗炎作用的主要机制,并有可能应用于其他神经退行性疾病。
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引用次数: 0
Environmental Enrichment and Metformin Combination Improves Cognitive Function through BDNF and HPA Axis in Chronically Stressed Rats. 环境强化联合二甲双胍通过慢性应激大鼠BDNF和HPA轴改善认知功能。
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050379003250520072717
Venkanna Rao Bhagya, Kariyanna Tilak, Loganathan Kanimozhi, Raju Sushma
<p><strong>Introduction: </strong>Chronic stress is a major global health issue linked to conditions such as anxiety, depression, and cognitive decline. In rodent studies, chronic immobilization stress (CIS) is commonly used to investigate the neuropsychological effects of prolonged stress, leading to behaviours such as anhedonia, anxiety, and depressive-like symptoms. An enriched environment (EE) provides physical, cognitive, and sensory stimulation, which promotes social interaction, supports brain development, and can enhance the effectiveness of pharmacological treatments, improving overall therapeutic outcomes. Metformin, commonly prescribed for type 2 diabetes, has antidiabetic effects and helps reduce oxidative stress, inflammation, and cell death in the brain, which may contribute to its neuroprotective properties. This study aims to evaluate the effectiveness of metformin, an enriched environment (EE), and its combination in alleviating anxiety and depression-like behaviours, memory impairments, and metabolic changes.</p><p><strong>Materials and methods: </strong>Rats were exposed to chronic immobilization stress (CIS) for 2 hours per day over a period of 10 days, followed by 14 days of treatment with metformin (200 mg/kg) and 6 hours of daily exposure to an enriched environment (EE). Behavioural tests, including the open field test (OFT), elevated plus maze (EPM), sucrose preference test (SPT), and novel object recognition test (NORT), were conducted. After completing the behavioural assessments, the animals were euthanized, and their plasma levels of corticosterone (CORT), high-density lipoprotein (HDL), low-density lipoprotein (LDL), cholesterol, triglycerides, and glucose were measured. Additionally, the concentration of brainderived neurotrophic factor (BDNF) in the hippocampus was analysed.</p><p><strong>Results: </strong>Rats exposed to chronic immobilization stress (CIS) exhibited increased anxiety and depressive- like behaviours, as well as poor performance in the novel object recognition test (NORT). These behavioural changes were linked to elevated levels of plasma corticosterone (CORT), LDL, cholesterol, triglycerides, and glucose, along with decreased HDL levels and lower hippocampal BDNF. Treatment with metformin, an enriched environment (EE), or their combination alleviated these effects, improving exploratory behaviour, sucrose preference, and recognition memory and reducing anxiety-like behaviours. These benefits were accompanied by increased hippocampal BDNF expression, elevated plasma HDL, and reduced levels of CORT, LDL, cholesterol, triglycerides, and glucose.</p><p><strong>Discussion: </strong>The combination of metformin and an enriched environment completely restored cognitive impairment and metabolic alterations in chronic stress conditions. Metformin's ability to improve energy metabolism and reduce oxidative stress could be further enhanced in an enriched environment, which promotes cognitive function and resil
慢性压力是一个主要的全球健康问题,与焦虑、抑郁和认知能力下降等疾病有关。在啮齿动物研究中,慢性固定应激(CIS)通常用于研究长期应激的神经心理学影响,导致快感缺乏、焦虑和抑郁样症状等行为。丰富的环境(EE)提供身体、认知和感觉刺激,促进社会互动,支持大脑发育,并可以增强药物治疗的有效性,改善整体治疗结果。二甲双胍通常用于治疗2型糖尿病,具有抗糖尿病作用,有助于减少氧化应激、炎症和大脑细胞死亡,这可能有助于其神经保护特性。本研究旨在评估二甲双胍、富集环境(EE)及其联合治疗在缓解焦虑和抑郁样行为、记忆障碍和代谢变化方面的有效性。材料和方法:将大鼠置于慢性固定应激(CIS)下,每天2小时,持续10天,随后给予二甲双胍(200 mg/kg)治疗14天,并每天暴露于富集环境(EE) 6小时。行为学测试包括开阔场测试(OFT)、高架迷宫测试(EPM)、蔗糖偏好测试(SPT)和新目标识别测试(NORT)。完成行为评估后,对动物实施安乐死,并测量其血浆皮质酮(CORT)、高密度脂蛋白(HDL)、低密度脂蛋白(LDL)、胆固醇、甘油三酯和葡萄糖水平。此外,还分析了海马脑源性神经营养因子(BDNF)的浓度。结果:暴露于慢性固定应激(CIS)的大鼠表现出焦虑和抑郁样行为增加,并且在新物体识别测试(NORT)中表现不佳。这些行为变化与血浆皮质酮(CORT)、低密度脂蛋白、胆固醇、甘油三酯和葡萄糖水平升高,以及高密度脂蛋白水平下降和海马BDNF降低有关。用二甲双胍、丰富的环境(EE)或它们的联合治疗减轻了这些影响,改善了探索行为、蔗糖偏好和识别记忆,减少了焦虑样行为。这些益处伴随着海马BDNF表达增加,血浆HDL升高,CORT、LDL、胆固醇、甘油三酯和葡萄糖水平降低。讨论:二甲双胍联合丰富的环境完全恢复慢性应激条件下的认知障碍和代谢改变。二甲双胍改善能量代谢和减少氧化应激的能力可以在丰富的环境中进一步增强,从而促进认知功能和对压力的恢复能力。结论:因此,有证据表明,情感表达可以积极影响二甲双胍的神经保护效果,并为减轻应激诱导的行为和生化改变提供了有希望的治疗方法。
{"title":"Environmental Enrichment and Metformin Combination Improves Cognitive Function through BDNF and HPA Axis in Chronically Stressed Rats.","authors":"Venkanna Rao Bhagya, Kariyanna Tilak, Loganathan Kanimozhi, Raju Sushma","doi":"10.2174/0115672050379003250520072717","DOIUrl":"10.2174/0115672050379003250520072717","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Introduction: &lt;/strong&gt;Chronic stress is a major global health issue linked to conditions such as anxiety, depression, and cognitive decline. In rodent studies, chronic immobilization stress (CIS) is commonly used to investigate the neuropsychological effects of prolonged stress, leading to behaviours such as anhedonia, anxiety, and depressive-like symptoms. An enriched environment (EE) provides physical, cognitive, and sensory stimulation, which promotes social interaction, supports brain development, and can enhance the effectiveness of pharmacological treatments, improving overall therapeutic outcomes. Metformin, commonly prescribed for type 2 diabetes, has antidiabetic effects and helps reduce oxidative stress, inflammation, and cell death in the brain, which may contribute to its neuroprotective properties. This study aims to evaluate the effectiveness of metformin, an enriched environment (EE), and its combination in alleviating anxiety and depression-like behaviours, memory impairments, and metabolic changes.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Materials and methods: &lt;/strong&gt;Rats were exposed to chronic immobilization stress (CIS) for 2 hours per day over a period of 10 days, followed by 14 days of treatment with metformin (200 mg/kg) and 6 hours of daily exposure to an enriched environment (EE). Behavioural tests, including the open field test (OFT), elevated plus maze (EPM), sucrose preference test (SPT), and novel object recognition test (NORT), were conducted. After completing the behavioural assessments, the animals were euthanized, and their plasma levels of corticosterone (CORT), high-density lipoprotein (HDL), low-density lipoprotein (LDL), cholesterol, triglycerides, and glucose were measured. Additionally, the concentration of brainderived neurotrophic factor (BDNF) in the hippocampus was analysed.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;Rats exposed to chronic immobilization stress (CIS) exhibited increased anxiety and depressive- like behaviours, as well as poor performance in the novel object recognition test (NORT). These behavioural changes were linked to elevated levels of plasma corticosterone (CORT), LDL, cholesterol, triglycerides, and glucose, along with decreased HDL levels and lower hippocampal BDNF. Treatment with metformin, an enriched environment (EE), or their combination alleviated these effects, improving exploratory behaviour, sucrose preference, and recognition memory and reducing anxiety-like behaviours. These benefits were accompanied by increased hippocampal BDNF expression, elevated plasma HDL, and reduced levels of CORT, LDL, cholesterol, triglycerides, and glucose.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Discussion: &lt;/strong&gt;The combination of metformin and an enriched environment completely restored cognitive impairment and metabolic alterations in chronic stress conditions. Metformin's ability to improve energy metabolism and reduce oxidative stress could be further enhanced in an enriched environment, which promotes cognitive function and resil","PeriodicalId":94309,"journal":{"name":"Current Alzheimer research","volume":" ","pages":"288-301"},"PeriodicalIF":1.9,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144145373","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Microglial Modulation in Alzheimer's Disease: Central Players in Neuroinflammation and Pathogenesis. 阿尔茨海默病中的小胶质细胞调节:神经炎症和发病机制的核心角色
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050364292250113063513
Md Sadique Hussain, Yumna Khan, Rabab Fatima, Mudasir Maqbool, Prasanna Srinivasan Ramalingam, Mohammad Gayoor Khan, Ajay Singh Bisht

Alzheimer's disease (AD) is an age-related, progressive neurodegenerative disorder of cognition with clinical features and anatomical hallmarks of amyloid-β plaques and/or neurofibrillary tangles. New studies revealed that microglia, the native immune cells in the brain, are crucial in the development of AD. The present review aims at outlining various roles of microglia in AD especially targeting their role in neuroinflammation. These indicate that microglial dysfunction contributes to AD pathology by affecting both amyloid-β phagocytosis and tau hyperphosphorylation. Other investigative molecular perpetrators, including TREM2, also influence the microglial relevance to amyloid and tau, as well as the overall disease phase. The functional microglia can protect neurons, while the dysfunctional one has the capability of derailing neuronal potentials and aggravating neurodegeneration. We have also discussed therapeutic strategies that start with targeting microglia to reduce neuroinflammation and reinstate balance. However, certain problems, including the side effects of microglial modulation, cost constraint, and accessibility, are areas of concern. In this review, the author presents the current state of knowledge on the potential of microglia-targeted treatments, their risks, and benefits. Thus, this article emphasizes the importance of the expansion of research to decipher the exact manipulation of microglia in AD with the goal of applying these findings given therapeutic approaches.

阿尔茨海默病(AD)是一种与年龄相关的进行性神经退行性认知疾病,其临床特征和解剖学特征为淀粉样蛋白-β斑块和/或神经原纤维缠结。新的研究表明,大脑中的天然免疫细胞小胶质细胞在阿尔茨海默病的发展中起着至关重要的作用。本文旨在概述小胶质细胞在阿尔茨海默病中的各种作用,特别是它们在神经炎症中的作用。这些表明,小胶质细胞功能障碍通过影响淀粉样蛋白-β吞噬和tau蛋白过度磷酸化来促进AD病理。包括TREM2在内的其他研究分子肇事者也影响与淀粉样蛋白和tau蛋白相关的小胶质细胞以及整个疾病阶段。功能正常的小胶质细胞具有保护神经元的作用,而功能失调的小胶质细胞具有使神经元电位脱轨和加重神经退行性变的能力。我们也讨论了从靶向小胶质细胞开始的治疗策略,以减少神经炎症和恢复平衡。然而,某些问题,包括小胶质细胞调节的副作用、成本限制和可及性,是值得关注的领域。在这篇综述中,作者介绍了目前关于小胶质细胞靶向治疗的潜力、风险和益处的知识状况。因此,本文强调了扩大研究的重要性,以破译阿尔茨海默病中小胶质细胞的确切操作,目标是将这些发现应用于治疗方法。
{"title":"Microglial Modulation in Alzheimer's Disease: Central Players in Neuroinflammation and Pathogenesis.","authors":"Md Sadique Hussain, Yumna Khan, Rabab Fatima, Mudasir Maqbool, Prasanna Srinivasan Ramalingam, Mohammad Gayoor Khan, Ajay Singh Bisht","doi":"10.2174/0115672050364292250113063513","DOIUrl":"10.2174/0115672050364292250113063513","url":null,"abstract":"<p><p>Alzheimer's disease (AD) is an age-related, progressive neurodegenerative disorder of cognition with clinical features and anatomical hallmarks of amyloid-β plaques and/or neurofibrillary tangles. New studies revealed that microglia, the native immune cells in the brain, are crucial in the development of AD. The present review aims at outlining various roles of microglia in AD especially targeting their role in neuroinflammation. These indicate that microglial dysfunction contributes to AD pathology by affecting both amyloid-β phagocytosis and tau hyperphosphorylation. Other investigative molecular perpetrators, including TREM2, also influence the microglial relevance to amyloid and tau, as well as the overall disease phase. The functional microglia can protect neurons, while the dysfunctional one has the capability of derailing neuronal potentials and aggravating neurodegeneration. We have also discussed therapeutic strategies that start with targeting microglia to reduce neuroinflammation and reinstate balance. However, certain problems, including the side effects of microglial modulation, cost constraint, and accessibility, are areas of concern. In this review, the author presents the current state of knowledge on the potential of microglia-targeted treatments, their risks, and benefits. Thus, this article emphasizes the importance of the expansion of research to decipher the exact manipulation of microglia in AD with the goal of applying these findings given therapeutic approaches.</p>","PeriodicalId":94309,"journal":{"name":"Current Alzheimer research","volume":" ","pages":"56-82"},"PeriodicalIF":1.9,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143461413","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effective Analysis of Alzheimer's Disease and Mechanisms of Methyl-4- Hydroxybenzoate using Network Toxicology, Molecular Docking, and Machine Learning Strategies. 使用网络毒理学、分子对接和机器学习策略有效分析4-羟苯甲酸甲酯的阿尔茨海默病和机制。
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050399031250623062112
Jianren Wen, Jingxuan Hu, Xue Yang, Feifei Luo, Guohui Zou

Introduction: Nowadays, the large increase in environmental pollutants has led to the occurrence and development of an increasing number of diseases. Studies have shown that exposure to environmental pollutants, such as methyl-4-hydroxybenzoate (MEP) may lead to Alzheimer's disease (AD). Therefore, the purpose of this study was to elucidate the complex effects and potential molecular mechanisms of environmental pollutants MEP on AD.

Methods: Through exhaustive exploration of databases, such as ChEMBL, STITCH, SwissTarget- Prediction, and Gene Expression Omnibus DataSets (GEO DataSets), we have identified a comprehensive list of 46 potential targets closely related to MEP and AD. After rigorous screening using the STRING platform and Cytoscape software, we narrowed the list to nine candidate targets and ultimately identified six hub targets using three proven machine learning methods (LASSO, RF, and SVM): CREBBP, BCL6, CXCR4, GRIN1, GOT2, and ITGA5. The "clusterProfiler" R package was used to conduct GO and KEGG enrichment analysis. At the same time, we also constructed disease prediction models for core genes. At last, six hub targets were executed molecular docking.

Results: We derived 46 key target genes related to MEP and AD and conducted gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. MEP might play a role in AD by affecting the pathways of neuroactive ligand-receptor interaction. Nine genes were screened as pivotal targets, followed by machine learning methods to identify six hub targets. Molecular docking analysis showed a good binding ability between MEP and CREBBP, BCL6, CXCR4, GRIN1, GOT2 and ITGA5. In addition, changes in the immune microenvironment revealed a significant impact of immune status on AD.

Discussions: This study revealed that MEP may induce AD through multiple mechanisms, such as oxidative stress, neurotoxicity, and immune regulation, and identified six core targets (CREBBP, BCL6, etc.) and found that they are related to changes in the immune microenvironment, such as T cells and B cells, providing new molecular targets for AD intervention.

Conclusion: Overall, CREBBP, BCL6, CXCR4, GRIN1, GOT2, and ITGA5 have been identified as the crucial targets correlating with AD. Our findings provide a theoretical framework for understanding the complex molecular mechanisms underlying the effects of MEP on AD and provide insights for the development of prevention and treatment of AD caused by exposure to MEP.

导读:如今,环境污染物的大量增加导致了越来越多疾病的发生和发展。研究表明,接触环境污染物,如甲基-4-羟基苯甲酸酯(MEP)可能导致阿尔茨海默病(AD)。因此,本研究的目的是阐明环境污染物MEP对AD的复杂影响及其可能的分子机制。方法:通过对ChEMBL、STITCH、SwissTarget- Prediction和Gene Expression Omnibus DataSets (GEO DataSets)等数据库的全面研究,我们确定了46个与MEP和AD密切相关的潜在靶点。在使用STRING平台和Cytoscape软件进行严格筛选后,我们将列表缩小到9个候选靶点,并最终使用三种经过验证的机器学习方法(LASSO, RF和SVM)确定了6个枢纽靶点:CREBBP, BCL6, CXCR4, GRIN1, GOT2和ITGA5。使用“clusterProfiler”R包进行GO和KEGG富集分析。同时,我们还构建了核心基因的疾病预测模型。最后对6个枢纽靶点进行分子对接。结果:我们获得了46个与MEP和AD相关的关键靶基因,并进行了基因本体(GO)和京都基因与基因组百科全书(KEGG)通路分析。MEP可能通过影响神经活性配体-受体相互作用的途径在AD中发挥作用。筛选9个基因作为关键靶点,然后通过机器学习方法确定6个枢纽靶点。分子对接分析表明,MEP与CREBBP、BCL6、CXCR4、GRIN1、GOT2和ITGA5具有良好的结合能力。此外,免疫微环境的变化揭示了免疫状态对AD的显著影响。讨论:本研究揭示了MEP可能通过氧化应激、神经毒性、免疫调节等多种机制诱发AD,并确定了6个核心靶点(CREBBP、BCL6等),发现它们与免疫微环境(如T细胞、B细胞)的改变有关,为AD干预提供了新的分子靶点。结论:总的来说,CREBBP、BCL6、CXCR4、GRIN1、GOT2和ITGA5被确定为与AD相关的关键靶点。我们的研究结果为理解MEP对AD影响的复杂分子机制提供了理论框架,并为MEP暴露引起的AD的预防和治疗的发展提供了见解。
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引用次数: 0
The Association between the rs6656401 Locus of the CR1 Gene and Structural Alterations of Brain Effects in Han Chinese Patients with Alzheimer's Disease. CR1基因rs6656401位点与汉族阿尔茨海默病患者脑效应结构改变的关系
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050397092250823195514
Shu-Yun Zhou, Han-Xiao Lin, Jia-Ming Tang, Qing-Yu Yao, Jia-Wei Hu, Wen-Jun Long, Wen-Zhuo Dai, Tao Ma, Xi-Chen Zhu

Introduction: The complement receptor 1 (CR1) gene is identified as the one closely associated with Alzheimer's disease (AD). However, there has been no exploration of the imaging alterations associated with the CR1 gene in AD patients of the Han population. The purpose of this study is to investigate the association between the rs6656401 mutation and neuroimaging variations in Han AD patients.

Methods: We collected nuclear magnetic resonance images from 101 patients with AD and 98 healthy controls (HC). The subjects in this study, based on the different genotypes of rs6656401, were divided into three groups, with the number of AA, AG, and GG genotypes in the AD group being 1, 17, and 83, and 1, 8, and 89 in the HC group. Data were analyzed using the dominant model. Structural differences in the brain tissue between genotypes at the rs6656401 polymorphic locus were compared using voxel-based morphological analysis, cortical thickness, and graph-theoretic analysis to construct structural networks.

Results: Seven regions (namely, right precuneus, right caudal middle frontal cortical, right rostral middle frontal, right superior frontal, right bankssts, right superior parietal, and right paracentral) were significantly different across CR1 rs6656401 genotypes. The voxel-based morphometry analysis revealed that voxel cluster sizes in the left cerebellum, left superior temporal gyrus, right superior frontal gyrus orbital, right precuneus, and right superior parietal were significantly different in the AA, AG, and GG groups. The degree centrality (Dc) of the left inferior frontal gyrus was significantly greater in the GG group than in the AG group after false discovery rate correction in the structural network analysis.

Discussion: This study demonstrates that the rs6656401 AA genotype primarily induces structural alterations in the frontal, temporal, and parietal lobes of AD patients, with significant changes in the right middle frontal gyrus, precuneus, and superior parietal gyrus, along with Dc index alterations in the left inferior frontal gyrus affecting brain network function. Our findings confirm the association between the rs6656401 polymorphism and AD-related brain structural changes, providing the first evidence of these regional alterations in Han Chinese AD cohorts. Future studies will elucidate the locus's pathological mechanism to inform early diagnosis and targeted therapies.

Conclusion: Our study first indicated that CR1 rs6656401 genotypes significantly influenced the morphological and structural covariate networks in Han AD patients.

补体受体1 (CR1)基因被确定为与阿尔茨海默病(AD)密切相关的基因。然而,目前还没有关于汉族AD患者CR1基因相关影像学改变的研究。本研究的目的是探讨汉族AD患者rs6656401突变与神经影像学变异之间的关系。方法:收集101例AD患者和98例健康对照(HC)的核磁共振图像。本研究受试者根据rs6656401基因型的不同分为三组,其中AD组AA、AG、GG基因型分别为1、17、83个,HC组分别为1、8、89个。采用优势模型对数据进行分析。采用基于体素的形态学分析、皮质厚度分析和图论分析构建结构网络,比较了rs6656401多态位点基因型间脑组织结构差异。结果:CR1 rs6656401基因型的7个区域(右侧楔前叶、右侧尾侧额叶中皮层、右侧吻侧额叶中、右侧额叶上、右侧腹侧、右侧顶叶上和右侧中央旁)在不同基因型间存在显著差异。体素形态学分析显示,AA组、AG组和GG组左小脑、左颞上回、右额上回眶、右楔前叶和右顶叶上的体素簇大小存在显著差异。结构网络分析错误发现率校正后,GG组左侧额下回的中心性度(Dc)明显大于AG组。讨论:本研究表明rs6656401 AA基因型主要诱导AD患者额叶、颞叶和顶叶的结构改变,其中右侧额叶中回、楔前叶和顶叶上回发生显著变化,左侧额下回Dc指数改变影响脑网络功能。我们的研究结果证实了rs6656401多态性与AD相关的大脑结构变化之间的关联,为汉族AD队列中这些区域变化提供了第一个证据。未来的研究将阐明该基因座的病理机制,为早期诊断和靶向治疗提供信息。结论:本研究首次表明CR1 rs6656401基因型显著影响汉族AD患者的形态和结构协变量网络。
{"title":"The Association between the rs6656401 Locus of the CR1 Gene and Structural Alterations of Brain Effects in Han Chinese Patients with Alzheimer's Disease.","authors":"Shu-Yun Zhou, Han-Xiao Lin, Jia-Ming Tang, Qing-Yu Yao, Jia-Wei Hu, Wen-Jun Long, Wen-Zhuo Dai, Tao Ma, Xi-Chen Zhu","doi":"10.2174/0115672050397092250823195514","DOIUrl":"10.2174/0115672050397092250823195514","url":null,"abstract":"<p><strong>Introduction: </strong>The complement receptor 1 (CR1) gene is identified as the one closely associated with Alzheimer's disease (AD). However, there has been no exploration of the imaging alterations associated with the CR1 gene in AD patients of the Han population. The purpose of this study is to investigate the association between the rs6656401 mutation and neuroimaging variations in Han AD patients.</p><p><strong>Methods: </strong>We collected nuclear magnetic resonance images from 101 patients with AD and 98 healthy controls (HC). The subjects in this study, based on the different genotypes of rs6656401, were divided into three groups, with the number of AA, AG, and GG genotypes in the AD group being 1, 17, and 83, and 1, 8, and 89 in the HC group. Data were analyzed using the dominant model. Structural differences in the brain tissue between genotypes at the rs6656401 polymorphic locus were compared using voxel-based morphological analysis, cortical thickness, and graph-theoretic analysis to construct structural networks.</p><p><strong>Results: </strong>Seven regions (namely, right precuneus, right caudal middle frontal cortical, right rostral middle frontal, right superior frontal, right bankssts, right superior parietal, and right paracentral) were significantly different across CR1 rs6656401 genotypes. The voxel-based morphometry analysis revealed that voxel cluster sizes in the left cerebellum, left superior temporal gyrus, right superior frontal gyrus orbital, right precuneus, and right superior parietal were significantly different in the AA, AG, and GG groups. The degree centrality (Dc) of the left inferior frontal gyrus was significantly greater in the GG group than in the AG group after false discovery rate correction in the structural network analysis.</p><p><strong>Discussion: </strong>This study demonstrates that the rs6656401 AA genotype primarily induces structural alterations in the frontal, temporal, and parietal lobes of AD patients, with significant changes in the right middle frontal gyrus, precuneus, and superior parietal gyrus, along with Dc index alterations in the left inferior frontal gyrus affecting brain network function. Our findings confirm the association between the rs6656401 polymorphism and AD-related brain structural changes, providing the first evidence of these regional alterations in Han Chinese AD cohorts. Future studies will elucidate the locus's pathological mechanism to inform early diagnosis and targeted therapies.</p><p><strong>Conclusion: </strong>Our study first indicated that CR1 rs6656401 genotypes significantly influenced the morphological and structural covariate networks in Han AD patients.</p>","PeriodicalId":94309,"journal":{"name":"Current Alzheimer research","volume":" ","pages":"779-793"},"PeriodicalIF":1.9,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145017086","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Spectral Biomarkers of Functional Brain Network Alteration in Alzheimer's Disease. 阿尔茨海默病脑功能网络改变的光谱生物标志物。
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050434251251008104505
Soudeh Behrouzinia, Mehdi Afshar, Alireza Khanteymoori

Introduction: The primary objective of this study was to examine changes in brain network architecture across multiple frequency bands using spectral analysis of both weighted and binarized functional connectivity networks. This cross-sectional observational study, conducted as a secondary analysis of a publicly available EEG dataset, analyzed spectral coherence measurements from 25 patients with Alzheimer's disease (AD) and 25 age- and sex-matched healthy controls (HC). Nevertheless, the modest sample size and cultural homogeneity of the dataset may limit the statistical power and generalizability of the results. A data-driven thresholding approach was employed to generate binary networks, allowing a robust comparison of connectivity disruptions associated with AD.

Method: Brain network features derived from the graph Laplacian, including weighted Fiedler value, spectral range, and Middle Eigenvalue, were analyzed across seven frequency layers: delta, theta, alpha1, alpha2, beta1, beta2, and gamma. For binary networks, the Fiedler value was calculated after thresholding. Statistical group comparisons between AD and HC were performed using t-tests (p < 0.05), and each feature was assessed based on the number of frequency bands showing significant differences.

Results: Among all features, the weighted Fiedler value was the most discriminative, showing significant reductions in AD patients within the alpha2 and beta1 bands. In binary networks, the Fiedler value remained significantly lower in AD within the alpha2 band, confirming topological degradation even without edge weight information. Other spectral features showed similar trends, but did not reach statistical significance in the binary networks.

Discussion: The consistent decline in Fiedler value across both weighted and binary networks indicates a global reduction in connectivity characteristic of AD. These spectral markers offer a quantitative and interpretable framework for understanding the progressive disconnection syndrome in AD.

Conclusion: This study demonstrates significant alterations in Laplacian spectral features of brain networks between the AD and HC groups across specific frequency bands. These exploratory findings indicate that the spectral features, particularly the Fiedler value, consistently differentiate AD patients from healthy controls across frequency bands, suggesting its potential as a biomarker. However, larger and longitudinal studies are needed to confirm its diagnostic and prognostic utility. The combined use of weighted and binarized connectivity matrices enhances analytical sensitivity and facilitates the application of spectral graph theory for the early detection and monitoring of AD.

本研究的主要目的是利用加权和二值化功能连接网络的频谱分析来研究大脑网络结构在多个频段的变化。这项横断面观察性研究是对公开可用的脑电图数据集进行的二次分析,分析了25名阿尔茨海默病(AD)患者和25名年龄和性别匹配的健康对照(HC)的频谱相干性测量。然而,数据集的适度样本量和文化同质性可能会限制统计能力和结果的普遍性。采用数据驱动的阈值方法生成二进制网络,允许对与AD相关的连接中断进行稳健的比较。方法:从拉普拉斯图中提取脑网络特征,包括加权Fiedler值、频谱范围和Middle Eigenvalue,在delta、theta、alpha1、alpha2、beta1、beta2和gamma七个频率层上进行分析。对于二值网络,阈值化后计算费德勒值。AD与HC的统计学组间比较采用t检验(p < 0.05),以有显著差异的频带数对各特征进行评价。结果:在所有特征中,加权Fiedler值最具鉴别性,显示AD患者在alpha2和beta1波段内显著减少。在二元网络中,在alpha2频带内AD的Fiedler值仍然明显较低,即使没有边权信息,也证实了拓扑退化。其他光谱特征表现出类似的趋势,但在二元网络中没有达到统计学意义。讨论:在加权网络和二元网络中,费德勒值的持续下降表明AD的连通性特征在全球范围内降低。这些谱标记提供了一个定量的和可解释的框架来理解阿尔茨海默病的进行性断连综合征。结论:本研究表明AD组和HC组在特定频段的脑网络拉普拉斯谱特征有显著变化。这些探索性发现表明,频谱特征,特别是Fiedler值,在不同的频段上一致地将AD患者与健康对照区分开来,这表明其作为生物标志物的潜力。然而,需要更大规模的纵向研究来证实其诊断和预后的效用。加权连通性矩阵和二值化连通性矩阵的结合使用提高了分析灵敏度,有利于谱图理论在AD早期发现和监测中的应用。
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引用次数: 0
Therapeutic Advances in Alzheimer’s Disease: Integrating Natural, Semi-Synthetic, and Synthetic Drug Strategies 阿尔茨海默病的治疗进展:整合天然、半合成和合成药物策略。
IF 1.9 Pub Date : 2025-01-01 DOI: 10.2174/0115672050366727250513061730
Brijesh Singh Chauhan, Yash Pal Singh, Burkhard Poeggeler, Sandeep Kumar Singh

Alzheimer's disease (AD) is a neurodegenerative disorder associated with age, marked by progressive memory loss linked to the decline of cholinergic neurons, accumulation of amyloid plaques, and the presence of Neurofibrillary Tangles (NFTs). Neuropil threads in the brain contribute to amyloidosis and dementia. Despite extensive research, AD's etiology remains unclear, and currently, no promising therapy exists. This review examines the role of natural, semi-synthetic, and synthetic drugs in AD treatment. Natural drugs demonstrate safety and efficacy with minimal adverse effects, while most agents, whether natural or synthetic, target multiple steps or directly counteract amyloidogenesis, tau protein pathology, oxidative stress, NMDA receptor activity, inflammation, acetylcholine (AChE) function, or α, β, γ secretase activity. In pursuit of improved treatment outcomes, we explore the effectiveness and challenges of various therapeutic interventions. Our hypothesis underscores the importance of an integrated approach combining these drug types for tailored symptom relief, suggesting combined therapies may offer greater therapeutic benefits compared to single-drug approaches. The drugs discussed show potential in regulating AD, thereby presenting viable options for its management. However, to obtain more favorable results, additional studies are needed by combining these drugs.

阿尔茨海默病(AD)是一种与年龄相关的神经退行性疾病,其特征是与胆碱能神经元下降、淀粉样斑块积累和神经原纤维缠结(nft)存在相关的进行性记忆丧失。大脑中的神经丝线会导致淀粉样变性和痴呆。尽管进行了广泛的研究,但阿尔茨海默病的病因尚不清楚,目前也没有有希望的治疗方法。本文综述了天然、半合成和合成药物在阿尔茨海默病治疗中的作用。天然药物具有安全性和有效性,副作用最小,而大多数药物,无论是天然的还是合成的,都针对多个步骤或直接对抗淀粉样蛋白形成,tau蛋白病理,氧化应激,NMDA受体活性,炎症,乙酰胆碱(AChE)功能或α, β, γ分泌酶活性。为了提高治疗效果,我们探讨了各种治疗干预措施的有效性和挑战。我们的假设强调了综合方法结合这些药物类型对量身定制的症状缓解的重要性,表明联合治疗可能比单药治疗提供更大的治疗效果。所讨论的药物显示出调节AD的潜力,从而为其管理提供了可行的选择。然而,为了获得更有利的结果,还需要进一步的研究来联合这些药物。
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引用次数: 0
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Current Alzheimer research
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