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RNA-binding motif protein 28 enhances angiogenesis by improving STAT3 translation in hepatocellular carcinoma RNA 结合基调蛋白 28 通过改善肝细胞癌中 STAT3 的翻译促进血管生成。
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-22 DOI: 10.1016/j.canlet.2024.217191

Hepatocellular carcinoma (HCC) is a prevalent malignant tumor characterized by extensive angiogenesis. However, the underlying mechanisms of HCC pathogenesis remain unclear. Previous studies have shown that RNA-binding proteins (RBPs) are implicated in HCC pathogenesis. In this study, we observed that increased RBM28 expression in HCC tissues was positively correlated with tumor microvascular density and negatively correlated with patient prognosis. Overexpression of RBM28 in HCC cells promoted tubule formation in human umbilical vein endothelial cells, whereas inhibition of RBM28 had the opposite effect, furthermore, the role of RBM28 in the progression of HCC was assessed using transgenic mouse models and chemically induced HCC models. We used various molecular assays and high-throughput detection methods to evaluate the role of RBM28 in promoting angiogenesis in HCC. Increased RBM28 expression in HCC directly binds to STAT3 mRNA, recruiting EIF4E to increase STAT3 expression and enhancing the secretion and expression of vascular endothelial growth factor A; consequently, promoting neovascularization in HCC. The potential of RBM28 as a viable diagnostic and therapeutic target for HCC was assessed using multi-cohort clinical samples and animal models. In summary, our results provide insights into the pathogenesis, clinical diagnosis, and treatment of HCC.

肝细胞癌(HCC)是一种以广泛血管生成为特征的常见恶性肿瘤。然而,HCC 发病的内在机制仍不清楚。以往的研究表明,RNA 结合蛋白(RBPs)与 HCC 发病机制有关。本研究观察到,HCC 组织中 RBM28 表达的增加与肿瘤微血管密度呈正相关,与患者预后呈负相关。此外,我们还利用转基因小鼠模型和化学诱导的 HCC 模型评估了 RBM28 在 HCC 进展中的作用。我们使用了多种分子测定和高通量检测方法来评估 RBM28 在促进 HCC 血管生成中的作用。HCC 中 RBM28 表达的增加可直接与 STAT3 mRNA 结合,招募 EIF4E 以增加 STAT3 的表达,并增强血管内皮生长因子 A 的分泌和表达,从而促进 HCC 中血管的新生。我们利用多队列临床样本和动物模型评估了 RBM28 作为 HCC 诊断和治疗靶点的潜力。总之,我们的研究结果为 HCC 的发病机制、临床诊断和治疗提供了新的见解。
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引用次数: 0
NBS1 lactylation and damaged DNA repair NBS1 乳化和受损 DNA 修复
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-22 DOI: 10.1016/j.canlet.2024.217128
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引用次数: 0
6-Phosphogluconate dehydrogenase promotes glycolysis and fatty acid synthesis by inhibiting the AMPK pathway in lung adenocarcinoma cells 6-磷酸葡萄糖酸脱氢酶通过抑制肺腺癌细胞的 AMPK 通路促进糖酵解和脂肪酸合成
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-22 DOI: 10.1016/j.canlet.2024.217177

Abnormal metabolism has emerged as a prominent hallmark of cancer and plays a pivotal role in carcinogenesis and progression of lung adenocarcinoma (LUAD). In this study, single-cell sequencing revealed that the metabolic enzyme 6-phosphogluconate dehydrogenase (PGD), which is a critical regulator of the pentose phosphate pathway (PPP), is significantly upregulated in the malignant epithelial cell subpopulation during malignant progression. However, the precise functional significance of PGD in LUAD and its underlying mechanisms remain elusive. Through the integration of TCGA database analysis and LUAD tissue microarray data, it was found that PGD expression was significantly upregulated in LUAD and closely correlated with a poor prognosis in LUAD patients. Moreover, in vitro and in vivo analyses demonstrated that PGD knockout and inhibition of its activity mitigated the proliferation, migration, and invasion of LUAD cells. Mechanistically, immunoprecipitation-mass spectrometry (IP-MS) revealed for the first time that IQGAP1 is a robust novel interacting protein of PGD. PGD decreased p-AMPK levels by competitively interacting with the IQ domain of the known AMPKα binding partner IQGAP1, which promoted glycolysis and fatty acid synthesis in LUAD cells. Furthermore, we demonstrated that the combination of Physcion (a PGD-specific inhibitor) and metformin (an AMPK agonist) could inhibit tumor growth more effectively both in vivo and in vitro. Collectively, these findings suggest that PGD is a potential prognostic biomarker and therapeutic target for LUAD.

代谢异常已成为癌症的一个显著特征,在肺腺癌(LUAD)的发生和发展过程中起着关键作用。在这项研究中,单细胞测序发现,代谢酶 6-磷酸葡萄糖酸脱氢酶(PGD)是磷酸戊糖途径(PPP)的关键调节因子,在恶性进展过程中,PGD 在恶性上皮细胞亚群中显著上调。然而,PGD在LUAD中的确切功能意义及其内在机制仍然难以捉摸。通过整合TCGA数据库分析和LUAD组织芯片数据,研究发现PGD在LUAD中表达显著上调,并与LUAD患者的不良预后密切相关。此外,体外和体内分析表明,PGD基因敲除和抑制其活性可减轻LUAD细胞的增殖、迁移和侵袭。从机理上讲,免疫沉淀-质谱分析(IP-MS)首次揭示了IQGAP1是PGD的一种强有力的新型相互作用蛋白。PGD通过与已知的AMPKα结合伙伴IQGAP1的IQ结构域竞争性相互作用,降低了p-AMPK水平,从而促进了LUAD细胞中的糖酵解和脂肪酸合成。此外,我们还证明了 Physcion(一种 PGD 特异性抑制剂)和二甲双胍(一种 AMPK 激动剂)联合使用能更有效地抑制体内和体外的肿瘤生长。总之,这些研究结果表明,PGD 是一种潜在的 LUAD 预后生物标志物和治疗靶点。
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引用次数: 0
Blockade of the lncRNA-PART1-PHB2 axis confers resistance to PARP inhibitor and promotes cellular senescence in ovarian cancer 阻断lncRNA-PART1-PHB2轴可使卵巢癌患者对PARP抑制剂产生抗药性并促进细胞衰老。
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-22 DOI: 10.1016/j.canlet.2024.217192

PARPi is currently the most important breakthrough in the treatment of ovarian cancer in decades, and it has been integrated into the initial maintenance therapy for ovarian cancer. However, the mechanism leading to PARPi resistance remains unelucidated. Our study aims to screen novel targets to better predict and reverse resistance to PARPi and explore the potential mechanism. Here, we conducted a comparative analysis of differentially expressed genes between platinum-sensitive and platinum-resistant groups within the TCGA ovarian cancer cohort. The analysis indicated that lncRNA PART1 was significantly highly expressed in platinum-sensitive patients compared to platinum-resistant individuals in TCGA-OV cohort and further validated in the GEO dataset and Qilu hospital cohort. Moreover, the upregulation of PART1 was positively correlated with a favorable prognosis in ovarian cancer. Furthermore, in vitro and in vivo experiments showed that inhibition of PART1 conferred resistance to both cisplatin and PARP inhibitor and promoted cellular senescence. Senescent cells are more resistant to chemotherapeutics. RNA antisense purification and RNA immunoprecipitation assays revealed an interaction between PART1 and PHB2, a crucial mitophagy receptor. Knockdown of PART1 could promote the degradation of PHB2, impairing mitophagy and leading to cellular senescence. Rescue assays indicated that overexpression of PHB2 remarkably diminished the resistance to PARPi and cellular senescence caused by PART1 knockdown. PDX models were utilized to further confirm the findings. Altogether, our study demonstrated that lncRNA PART1 has the potential to serve as a novel promising target to reverse resistance to PARPi and improve prognosis in ovarian cancer.

PARPi 是目前卵巢癌治疗领域数十年来最重要的突破,已被纳入卵巢癌的初始维持治疗中。然而,导致PARPi耐药的机制仍未阐明。我们的研究旨在筛选新型靶点,以更好地预测和逆转 PARPi 的耐药性,并探索其潜在机制。在此,我们对 TCGA 卵巢癌队列中铂敏感组和铂耐药组之间的差异表达基因进行了比较分析。分析表明,在TCGA-OV队列中,与铂类耐药个体相比,lncRNA PART1在铂类敏感患者中明显高表达,并在GEO数据集和齐鲁医院队列中得到进一步验证。此外,PART1 的上调与卵巢癌的良好预后呈正相关。此外,体外和体内实验表明,抑制PART1会使细胞对顺铂和PARP抑制剂产生耐药性,并促进细胞衰老。衰老细胞对化疗药物的抵抗力更强。RNA反义纯化和RNA免疫沉淀实验揭示了PART1与PHB2(一种重要的有丝分裂受体)之间的相互作用。敲除PART1可促进PHB2的降解,从而损害有丝分裂并导致细胞衰老。拯救实验表明,过表达 PHB2 能显著降低 PART1 敲除引起的 PARPi 抗性和细胞衰老。我们利用 PDX 模型进一步证实了这些发现。总之,我们的研究表明,lncRNA PART1有望成为逆转PARPi耐药性和改善卵巢癌预后的新靶点。
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引用次数: 0
Enhanced desmosome assembly driven by acquired high-level desmoglein-2 promotes phenotypic plasticity and endocrine resistance in ER+ breast cancer 获得性高水平脱模谷蛋白-2驱动的脱模小体组装增强了ER+乳腺癌的表型可塑性和内分泌抗性。
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-21 DOI: 10.1016/j.canlet.2024.217179

Acquired resistance to endocrine treatments remains a major clinical challenge. In this study, we found that desmoglein-2 (DSG2) plays a major role in acquired endocrine resistance and cellular plasticity in ER+ breast cancer (BC). By analysing the well-established fulvestrant-resistant ER+ BC model using single-cell RNA-seq, we revealed that ER inhibition leads to a specific increase in DSG2 in cancer cell populations, which in turn enhances desmosome formation in vitro and in vivo and cell phenotypic plasticity that promotes resistance to treatment. DSG2 depletion reduced tumorigenesis and metastasis in fulvestrant-resistant xenograft models and promoted fulvestrant efficiency. Mechanistically, DSG2 forms a desmosome complex with JUP and Vimentin and triggers Wnt/PCP signalling. We showed that elevated DSG2 levels, along with reduced ER levels and an activated Wnt/PCP pathway, predicted poor survival, suggesting that a DSG2high signature could be exploited for therapeutic interventions. Our analysis highlighted the critical role of DSG2-mediated desmosomal junctions following antiestrogen treatment.

内分泌治疗的获得性耐药性仍然是一项重大的临床挑战。在这项研究中,我们发现desmoglein-2(DSG2)在ER+乳腺癌(BC)的获得性内分泌耐药性和细胞可塑性中起着重要作用。通过使用单细胞RNA-seq分析成熟的氟维司群耐药ER+ BC模型,我们发现ER抑制会导致癌细胞群中DSG2的特异性增加,这反过来又会增强体外和体内脱落小体的形成以及细胞表型的可塑性,从而促进对治疗的耐药性。在氟维司群耐药的异种移植模型中,DSG2的耗竭可减少肿瘤发生和转移,并提高氟维司群的效率。从机理上讲,DSG2与JUP和Vimentin形成脱粘体复合物,并触发Wnt/PCP信号。我们的研究表明,DSG2水平的升高、ER水平的降低和Wnt/PCP通路的激活预示着患者的生存率较低,这表明可以利用DSG2高的特征进行治疗干预。我们的分析强调了抗雌激素治疗后DSG2介导的脱雌作用。
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引用次数: 0
Restoration of TFPI2 by LSD1 inhibition suppresses tumor progression and potentiates antitumor immunity in breast cancer 通过抑制 LSD1 恢复 TFPI2 可抑制肿瘤进展并增强乳腺癌的抗肿瘤免疫力
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-21 DOI: 10.1016/j.canlet.2024.217182

Histone lysine-specific demethylase 1 (LSD1) is frequently overexpressed in triple negative breast cancer (TNBC), which is associated with worse clinical outcome in TNBC patients. However, the underlying mechanisms by which LSD1 promotes TNBC progression remain to be identified. We recently established a genetically engineered murine model by crossing mammary gland conditional LSD1 knockout mice with Brca1-deficient mice to explore the role of LSD1 in TNBC pathogenesis. Cre-mediated Brca1 loss led to higher incidence of tumor formation in mouse mammary glands, which was hindered by concurrent depletion of LSD1, indicating a critical role of LSD1 in promoting Brca1-deficient tumors. We also demonstrated that the silencing of a tumor suppressor gene, Tissue Factor Pathway Inhibitor 2 (TFPI2), is functionally associated with LSD1-mediated TNBC progression. Mouse Brca1-deficient tumors exhibited elevated LSD1 expression and decreased TFPI2 level compared to normal mammary tissues. Analysis of TCGA database revealed that TFPI2 expression is significantly lower in aggressive ER-negative or basal-like BC. Restoration of TFPI2 through LSD1 inhibition increased H3K4me2 enrichment at the TFPI2 promoter, suppressed tumor progression, and enhanced antitumor efficacy of chemotherapeutic agent. Induction of TFPI2 by LSD1 ablation downregulates activity of matrix metalloproteinases (MMPs) that in turn increases the level of cytotoxic T lymphocyte attracting chemokines in tumor environment, leading to enhanced tumor infiltration of CD8+ T cells. Moreover, induction of TFPI2 potentiates antitumor effect of LSD1 inhibitor and immune checkpoint blockade in poorly immunogenic TNBC. Together, our study identifies previously unrecognized roles of TFPI2 in LSD1-mediated TNBC progression, therapeutic response, and immunogenic effects.

组蛋白赖氨酸特异性去甲基化酶1(LSD1)在三阴性乳腺癌(TNBC)中经常过表达,这与TNBC患者的临床预后较差有关。然而,LSD1 促进 TNBC 进展的潜在机制仍有待确定。最近,我们通过将乳腺条件性 LSD1 基因敲除小鼠与 Brca1 基因缺陷小鼠杂交,建立了一个基因工程小鼠模型,以探索 LSD1 在 TNBC 发病机制中的作用。Cre介导的Brca1缺失导致小鼠乳腺肿瘤形成的发生率升高,而LSD1的同时缺失阻碍了肿瘤的形成,这表明LSD1在促进Brca1缺失肿瘤的形成中起着关键作用。我们还证明了肿瘤抑制基因组织因子通路抑制因子2(TFPI2)的沉默与LSD1介导的TNBC进展在功能上相关。与正常乳腺组织相比,小鼠Brca1缺陷肿瘤表现出LSD1表达升高和TFPI2水平降低。对TCGA数据库的分析表明,在侵袭性ER阴性或基底样BC中,TFPI2的表达显著降低。通过抑制 LSD1 恢复 TFPI2 增加了 TFPI2 启动子处的 H3K4me2 富集,抑制了肿瘤的进展,增强了化疗药物的抗肿瘤效果。通过 LSD1 消融诱导 TFPI2 可下调基质金属蛋白酶(MMPs)的活性,进而增加肿瘤环境中吸引细胞毒性 T 淋巴细胞的趋化因子水平,导致 CD8+ T 细胞的肿瘤浸润增强。此外,在免疫原性差的 TNBC 中,诱导 TFPI2 能增强 LSD1 抑制剂和免疫检查点阻断剂的抗肿瘤作用。总之,我们的研究确定了 TFPI2 在 LSD1 介导的 TNBC 进展、治疗反应和免疫原性效应中以前未认识到的作用。
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引用次数: 0
Single-cell RNA sequencing of OSCC primary tumors and lymph nodes reveals distinct origin and phenotype of fibroblasts OSCC 原发肿瘤和淋巴结的单细胞 RNA 测序揭示了成纤维细胞的不同起源和表型。
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-20 DOI: 10.1016/j.canlet.2024.217180

Desmoplasia in fibroblasts within metastatic lymph nodes (MLNs) serves as an indicator of extranodal extension (ENE), which led mortality in oral squamous cell carcinoma (OSCC). However, systematic studies on fibroblasts in MLNs are lacking. Therefore, this study characterized the differences in phenotype, function, and origin of fibroblasts between primary tumors (PTs) and lymph nodes (LNs) in OSCC.

We generated single-cell maps of PTs and paired MLNs and draining LNs from three OSCC patients. The transcriptomic atlas, pseudotime analysis, intercellular communication networks and enrichment analysis of the single cells were characterized. Phenotype and function heterogeneity of fibroblast cells between PTs and MLNs were further verified in vitro.

Among 44,052 fibroblasts, we identified two distinct subpopulations of cancer-associated myofibroblastic cells (mCAFs): RGS4+ mCAF1 and COMP + mCAF2. Notably, they exhibited distinct distributions, with mCAF1 predominantly localized in the PTs and mCAF2 in the MLNs. Moreover, pseudotime analysis revealed their distinct origins: mCAF1 originated from inherent normal myofibroblastic cells in the PT, whereas mCAF2 originated from fibroblastic reticular cells in the LNs. Further functional experiments using primary fibroblasts revealed that, compared to mCAF1, mCAF2 in MLNs exhibited weaker crosstalk with immune cells but enhanced extracellular matrix activity, which is closely linked to ENE formation in OSCC. Additionally, we identified two fibroblast subgroups in a transforming state, indicating a potential epithelial–mesenchymal transition.

Our research offers profound insights into the heterogeneity of fibroblasts between the PT and MLN in OSCC, serving as an essential resource for future drug discovery endeavors.

转移性淋巴结(MLN)内成纤维细胞的脱鳞是结外扩展(ENE)的一个指标,它导致口腔鳞状细胞癌(OSCC)的死亡率。然而,目前还缺乏对MLNs内成纤维细胞的系统研究。因此,本研究描述了OSCC原发肿瘤(PT)和淋巴结(LN)中成纤维细胞在表型、功能和来源上的差异。我们生成了来自三名 OSCC 患者的原发肿瘤、配对 MLN 和引流 LN 的单细胞图谱。对单细胞的转录组图谱、伪时间分析、细胞间通讯网络和富集分析进行了表征。在体外进一步验证了PT和MLN之间成纤维细胞的表型和功能异质性。在 44,052 个成纤维细胞中,我们发现了两个不同的癌症相关肌成纤维细胞亚群(mCAFs):RGS4+ mCAF1 和 COMP+ mCAF2。值得注意的是,它们呈现出不同的分布,mCAF1 主要定位于 PT,而 mCAF2 则定位于 MLN。此外,假时分析还揭示了它们的不同来源:mCAF1 来源于 PT 中固有的正常肌成纤维细胞,而 mCAF2 则来源于 LN 中的成纤维网细胞。使用原代成纤维细胞进行的进一步功能实验显示,与 mCAF1 相比,MLNs 中的 mCAF2 与免疫细胞的串扰较弱,但细胞外基质活性增强,这与 OSCC 中 ENE 的形成密切相关。此外,我们还发现了两个处于转化状态的成纤维细胞亚群,这表明潜在的上皮-间质转化。我们的研究深入揭示了OSCC中PT和MLN之间成纤维细胞的异质性,为未来的药物发现工作提供了重要资源。
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引用次数: 0
METTL3-mediated m6A modification of LINC00520 confers glycolysis and chemoresistance in osteosarcoma via suppressing ubiquitination of ENO1. METTL3介导的LINC00520的m6A修饰通过抑制ENO1的泛素化赋予骨肉瘤糖酵解和化疗抗性。
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-19 DOI: 10.1016/j.canlet.2024.217194
Xianfu Wei, Jinyan Feng, Long Chen, Chao Zhang, Yongheng Liu, Yan Zhang, Yao Xu, Jin Zhang, Jinwu Wang, Houzhi Yang, Xiuxin Han, Guowen Wang

Chemoresistance remains the main obstacle limiting the treatment of osteosarcoma, seriously affecting the prognosis of adolescent patients with osteosarcoma. Recently, long non-coding RNAs (lncRNAs) were reported to be involved in chemoresistance, while the mechanisms of lncRNAs underlying osteosarcoma resistance to chemotherapy remain elusive. Here, LINC00520 was identified as a novel cisplatin resistance-related lncRNA in osteosarcoma, and its high expression was associated with poor prognosis of osteosarcoma patients. Functionally, LINC00520 could potentiate osteosarcoma resistance to cisplatin in vitro and in vivo. Mechanistically, LINC00520 bound to ENO1 and upregulated ENO1 protein expression by blocking FBXW7-mediated ENO1 ubiquitination and proteasomal degradation, thereby promoting glycolysis and ultimately inducing cisplatin resistance in osteosarcoma. Furthermore, METTL3 could stabilize and upregulate LINC00520 in an m6A-YTHDF2-dependent manner in osteosarcoma. This study proposes a novel lncRNA-driven mechanism for cisplatin resistance in osteosarcoma, and offers a promising therapeutic strategy for reversing chemoresistance in osteosarcoma by targeting the METTL3/LINC00520/ENO1/glycolysis axis.

化疗耐药性仍然是制约骨肉瘤治疗的主要障碍,严重影响青少年骨肉瘤患者的预后。最近,有报道称长非编码RNA(lncRNAs)参与了化疗耐药,而骨肉瘤化疗耐药的lncRNAs机制仍未确定。本文发现LINC00520是骨肉瘤中一种新型的顺铂耐药相关lncRNA,它的高表达与骨肉瘤患者的不良预后有关。在功能上,LINC00520可在体外和体内增强骨肉瘤对顺铂的耐药性。从机理上讲,LINC00520与ENO1结合,通过阻断FBXW7介导的ENO1泛素化和蛋白酶体降解,上调ENO1蛋白的表达,从而促进糖酵解,最终诱导骨肉瘤对顺铂的耐药性。此外,METTL3能以m6A-YTHDF2依赖的方式稳定和上调骨肉瘤中的LINC00520。这项研究提出了一种新的lncRNA驱动的骨肉瘤顺铂耐药机制,并为通过靶向METTL3/LINC00520/ENO1/糖酵解轴逆转骨肉瘤化疗耐药提供了一种前景广阔的治疗策略。
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引用次数: 0
Single-cell RNA-seq reveals heterogeneity in metastatic renal cell carcinoma and effect of anti-angiogenesis therapy in the pancreas metastatic lesion 单细胞RNA-seq揭示转移性肾细胞癌的异质性以及抗血管生成疗法对胰腺转移病灶的影响
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-17 DOI: 10.1016/j.canlet.2024.217193

Metastatic clear cell renal cell carcinoma has heterogenous tumor microenvironment (TME). Among the metastatic lesions, pancreas metastasis is rare and controversy in treatment approaches. Here, extensive primary and metastatic lesion samples were included by single-cell RNA-seq to decipher the distinct metastasis TME. The hypoxic and inflammatory TME of pancreas metastasis was decoded in this study, and the activation of PAX8-myc signaling, and metabolic reprogramming were observed. The active components including endothelial cells, fibroblasts and T cells were profiled. Meanwhile, we also evaluated the effect of anti-angiogenesis treatment in the pancreas metastasis patient. The potential mechanisms of pancreatic tropism, instability of genome, and the response of immunotherapy were also discussed in this work. Taken together, our findings suggest a clue to the heterogeneity in metastasis TME and provide evidence for the treatment of pancreas metastasis in renal cell carcinoma patients.

转移性透明细胞肾细胞癌具有异质性肿瘤微环境(TME)。在转移病灶中,胰腺转移是罕见的,在治疗方法上也存在争议。本研究采用单细胞RNA-seq技术纳入了大量原发和转移病灶样本,以解读不同的转移灶TME。该研究解密了胰腺转移瘤的缺氧和炎性TME,并观察到PAX8-myc信号的激活和代谢重编程。研究还分析了包括内皮细胞、成纤维细胞和 T 细胞在内的活性成分。同时,我们还评估了抗血管生成治疗在胰腺转移患者中的效果。本研究还讨论了胰腺滋养、基因组不稳定和免疫疗法反应的潜在机制。综上所述,我们的研究结果为转移TME的异质性提供了线索,并为肾细胞癌患者胰腺转移的治疗提供了证据。
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引用次数: 0
Spatial transcriptomic revealed intratumor heterogeneity and cancer stem cell enrichment in colorectal cancer metastasis 空间转录组揭示了结直肠癌转移的瘤内异质性和癌症干细胞富集。
IF 9.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-17 DOI: 10.1016/j.canlet.2024.217181

Metastasis is the main cause of mortality in colorectal cancer (CRC) patients. Exploring the mechanisms of metastasis is of great importance in both clinical and fundamental CRC research. CRC is a highly heterogeneous disease with variable therapeutic outcomes of treatment. In this study, we applied spatial transcriptomics (ST) to generate a tissue-wide transcriptome from two primary colorectal cancer tissues and their matched liver metastatic tissues. Spatial RNA information showed intratumoral heterogeneity (ITH) of both primary and metastatic tissues. The comparison of gene expressions across tissues revealed an apparent enrichment of cancer stem cells (CSCs) in metastatic tissues and identified FOXD1 as a novel metastatic CSC marker. Trajectory and pseudo-time analyses revealed distinct evolutionary trajectories and a dedifferentiation-differentiation process during metastasis. CellphoneDB analysis suggested a dominant interaction of CD74-MIF with tumor cells in metastatic tissues. Further analysis confirmed FOXD1 as a maker of CSCs and the predictor of patient survival, especially in metastatic diseases. Our study found ITH of primary and metastatic tissues and provides novel insights into the cellular mechanisms underlying liver metastasis of CRC and foundations for therapeutic strategies for CRC metastasis.

转移是结直肠癌(CRC)患者死亡的主要原因。探索转移的机制对 CRC 的临床和基础研究都非常重要。CRC 是一种高度异质性疾病,其治疗效果各不相同。在这项研究中,我们应用空间转录组学(ST)从两个原发性结直肠癌组织及其匹配的肝转移组织中生成了全组织范围的转录组。空间 RNA 信息显示了原发组织和转移组织的瘤内异质性(ITH)。对不同组织的基因表达进行比较后发现,癌症干细胞(CSC)在转移组织中明显富集,并确定 FOXD1 为新型转移 CSC 标记。轨迹和伪时间分析显示了转移过程中不同的进化轨迹和去分化-分化过程。CellphoneDB分析表明,在转移组织中,CD74-MIF与肿瘤细胞的相互作用占主导地位。进一步分析证实,FOXD1 是造血干细胞的制造者,也是预测患者生存期的指标,尤其是在转移性疾病中。我们的研究发现了原发性和转移性组织的 ITH,为了解 CRC 肝转移的细胞机制提供了新的视角,也为 CRC 转移的治疗策略奠定了基础。
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引用次数: 0
期刊
Cancer letters
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