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The loss of Spinster homolog 2 drives endothelial mesenchymal transition via SMS2-mediated disruption of sphingomyelin metabolism.
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-02 DOI: 10.14715/cmb/2025.70.1.15
Jin-Feng Qin, Yuan Li, Xiao-Dan Wang, Shuangxi Tu, Xiao Zhu, Kai Yin

Endothelial-mesenchymal transition (EndMT) is the process by which endothelial cells transform into mesenchymal cells, driving stromatogenesis and inflammatory responses, thereby contributing to the development of atherosclerotic plaques. Spinster homolog 2 (SPNS2), a protein responsible for S1P transport, regulates sphingolipid metabolism and signaling in endothelial cells to maintain vascular homeostasis. In the present work, we investigated the involvement of SPNS2 in endothelial mesenchymal transition. Knocking down SPNS2 in endothelial cells resulted in significant phenotypic changes, marked by a decrease in endothelial markers (CD31, VE-cadherin) and an increase in mesenchymal markers (Vimentin, α-SMA), confirming the occurrence of EndMT. Notably, SPNS2 knockdown leads to alterations in sphingolipid metabolism, most prominently marked by a significant increase in sphingomyelin (SM) levels. Similar cellular alterations were observed with the exogenous addition of SM, leading to the transition of endothelial cells from a cobblestone-like morphology to a dispersed, spindle-shaped form. In contrast, the exogenous addition of sphingomyelinase, which degrades SM, was able to reverse the endothelial-to-mesenchymal transition induced by SPNS2 knockdown. Mechanistically, our study suggests that SPNS2 knockdown promotes endothelial-to-mesenchymal transdifferentiation by upregulating SMS2 expression, which subsequently enhances sphingomyelin synthesis.

{"title":"The loss of Spinster homolog 2 drives endothelial mesenchymal transition via SMS2-mediated disruption of sphingomyelin metabolism.","authors":"Jin-Feng Qin, Yuan Li, Xiao-Dan Wang, Shuangxi Tu, Xiao Zhu, Kai Yin","doi":"10.14715/cmb/2025.70.1.15","DOIUrl":"https://doi.org/10.14715/cmb/2025.70.1.15","url":null,"abstract":"<p><p>Endothelial-mesenchymal transition (EndMT) is the process by which endothelial cells transform into mesenchymal cells, driving stromatogenesis and inflammatory responses, thereby contributing to the development of atherosclerotic plaques. Spinster homolog 2 (SPNS2), a protein responsible for S1P transport, regulates sphingolipid metabolism and signaling in endothelial cells to maintain vascular homeostasis. In the present work, we investigated the involvement of SPNS2 in endothelial mesenchymal transition. Knocking down SPNS2 in endothelial cells resulted in significant phenotypic changes, marked by a decrease in endothelial markers (CD31, VE-cadherin) and an increase in mesenchymal markers (Vimentin, α-SMA), confirming the occurrence of EndMT. Notably, SPNS2 knockdown leads to alterations in sphingolipid metabolism, most prominently marked by a significant increase in sphingomyelin (SM) levels. Similar cellular alterations were observed with the exogenous addition of SM, leading to the transition of endothelial cells from a cobblestone-like morphology to a dispersed, spindle-shaped form. In contrast, the exogenous addition of sphingomyelinase, which degrades SM, was able to reverse the endothelial-to-mesenchymal transition induced by SPNS2 knockdown. Mechanistically, our study suggests that SPNS2 knockdown promotes endothelial-to-mesenchymal transdifferentiation by upregulating SMS2 expression, which subsequently enhances sphingomyelin synthesis.</p>","PeriodicalId":9802,"journal":{"name":"Cellular and molecular biology","volume":"71 1","pages":"135-141"},"PeriodicalIF":1.5,"publicationDate":"2025-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143254718","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A critical evaluation of biochemical markers for the diagnosis of acute pancreatitis.
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-02 DOI: 10.14715/cmb/2025.70.1.3
Mohammed Merae Alshahrani

Acute pancreatitis (AP) is a common but poorly understood gastrointestinal illness. One explanation for this lack of awareness is the absence of clear recommendations on the use of biochemical markers to identify this illness. This is because knowledge in this field is always expanding. Serum amylase and lipase are two extensively utilized biochemical indicators in the diagnosis of AP. The lack of agreement on the optimal use of these markers, notably amylase and lipase, has an impact on diagnostic outcomes. Through a critical study of the current literatures, this review intends to explore in depth the use of biochemical markers in the diagnosis of AP. A comprehensive review of the literature had a glance at biochemical indicators in the context of AP diagnosis, diving into topics including pancreatic anatomy, functions, pathology, mechanisms of AP, etiologies, symptoms, and also diagnostic approaches. This review revealed areas of agreement and disagreement about biochemical indicators in the diagnosis of AP, as well as potential future research directions.

{"title":"A critical evaluation of biochemical markers for the diagnosis of acute pancreatitis.","authors":"Mohammed Merae Alshahrani","doi":"10.14715/cmb/2025.70.1.3","DOIUrl":"https://doi.org/10.14715/cmb/2025.70.1.3","url":null,"abstract":"<p><p>Acute pancreatitis (AP) is a common but poorly understood gastrointestinal illness. One explanation for this lack of awareness is the absence of clear recommendations on the use of biochemical markers to identify this illness. This is because knowledge in this field is always expanding. Serum amylase and lipase are two extensively utilized biochemical indicators in the diagnosis of AP. The lack of agreement on the optimal use of these markers, notably amylase and lipase, has an impact on diagnostic outcomes. Through a critical study of the current literatures, this review intends to explore in depth the use of biochemical markers in the diagnosis of AP. A comprehensive review of the literature had a glance at biochemical indicators in the context of AP diagnosis, diving into topics including pancreatic anatomy, functions, pathology, mechanisms of AP, etiologies, symptoms, and also diagnostic approaches. This review revealed areas of agreement and disagreement about biochemical indicators in the diagnosis of AP, as well as potential future research directions.</p>","PeriodicalId":9802,"journal":{"name":"Cellular and molecular biology","volume":"71 1","pages":"20-38"},"PeriodicalIF":1.5,"publicationDate":"2025-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143254778","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Coenzyme Q10 and its liposomal form prevent copper cardiotoxicity by attenuating oxidative stress, TLR-4/NF-κB signaling and necroptosis in rats.
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-02 DOI: 10.14715/cmb/2025.70.1.13
Hanan K Alghibiwi, Ahlam M Alhusiani, Wedad S Sarawi, Laila Fadda, Hatun A Alomar, Juman S Alsaab, Iman H Hasan, Asma S Alonazi, Nouf M Alrasheed, Samiah Alhabardi

Copper (Cu) is an essential element involved in numerous biochemical, metabolic and cellular processes. Excessive exposure to the pesticide copper sulfate (CuSO4) was associated with toxic effects. This study aims to evaluate the efficacy of Coenzyme Q10 (CoQ10) and its liposomal form (L-CoQ10) against myocardial injury induced by CuSO4, pinpointing the involvement of redox imbalance, TLR-4/NF-κB signaling and apoptosis. Cardiac injury in rats was induced by daily oral doses of CuSO4 for 7 days, the rats were treated orally with either CoQ10 or L-CoQ10 concurrently with CuSO4 for 7 days. Elevated serum cTnI, CK-MB and LDH were observed in CuSO4-intoxicated animals. Additionally, cellular antioxidant biomarkers were decreased and the expression levels of cardiac MDA, TLR-4, NF-κB, IL-6, IL-1β, and TNF-α were upregulated. CoQ10 and L-CoQ10 prevented myocardial injury and decreased the levels of both MDA and pro-inflammatory cytokines. CoQ10 and L-CoQ10 enhanced antioxidant capacity and Bcl-2, and downregulated caspase-3, Bax, p53, RIP3, MLKL, caspase-8 and TLR-4/NF-κB signaling. In conclusion, CoQ10 and L-CoQ10 effectively prevent CuSO4 cardiotoxicity in rats. Attenuation of redox imbalance, TLR-4/NF-κB signaling, pro-inflammatory response, and necroptosis along with enhancement of antioxidant response mediated their cardioprotective efficacy. CoQ10 could be valuable in protecting people vulnerable to Cu toxicity.

{"title":"Coenzyme Q10 and its liposomal form prevent copper cardiotoxicity by attenuating oxidative stress, TLR-4/NF-κB signaling and necroptosis in rats.","authors":"Hanan K Alghibiwi, Ahlam M Alhusiani, Wedad S Sarawi, Laila Fadda, Hatun A Alomar, Juman S Alsaab, Iman H Hasan, Asma S Alonazi, Nouf M Alrasheed, Samiah Alhabardi","doi":"10.14715/cmb/2025.70.1.13","DOIUrl":"https://doi.org/10.14715/cmb/2025.70.1.13","url":null,"abstract":"<p><p>Copper (Cu) is an essential element involved in numerous biochemical, metabolic and cellular processes. Excessive exposure to the pesticide copper sulfate (CuSO4) was associated with toxic effects. This study aims to evaluate the efficacy of Coenzyme Q10 (CoQ10) and its liposomal form (L-CoQ10) against myocardial injury induced by CuSO4, pinpointing the involvement of redox imbalance, TLR-4/NF-κB signaling and apoptosis. Cardiac injury in rats was induced by daily oral doses of CuSO4 for 7 days, the rats were treated orally with either CoQ10 or L-CoQ10 concurrently with CuSO4 for 7 days. Elevated serum cTnI, CK-MB and LDH were observed in CuSO4-intoxicated animals. Additionally, cellular antioxidant biomarkers were decreased and the expression levels of cardiac MDA, TLR-4, NF-κB, IL-6, IL-1β, and TNF-α were upregulated. CoQ10 and L-CoQ10 prevented myocardial injury and decreased the levels of both MDA and pro-inflammatory cytokines. CoQ10 and L-CoQ10 enhanced antioxidant capacity and Bcl-2, and downregulated caspase-3, Bax, p53, RIP3, MLKL, caspase-8 and TLR-4/NF-κB signaling. In conclusion, CoQ10 and L-CoQ10 effectively prevent CuSO4 cardiotoxicity in rats. Attenuation of redox imbalance, TLR-4/NF-κB signaling, pro-inflammatory response, and necroptosis along with enhancement of antioxidant response mediated their cardioprotective efficacy. CoQ10 could be valuable in protecting people vulnerable to Cu toxicity.</p>","PeriodicalId":9802,"journal":{"name":"Cellular and molecular biology","volume":"71 1","pages":"118-124"},"PeriodicalIF":1.5,"publicationDate":"2025-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143254794","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Harnessing the antimicrobial potential of Aegle marmelos against Mfa1 fimbriae in Porphyromonas gingivalis: a new strategy for endodontic therapy.
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-02 DOI: 10.14715/cmb/2025.70.1.10
Nezar Boreak, Noor Eissa Mousa Jaferi, Mohammed Bashery, Hanan Salem Otudi, Abdullah Saad Almuqbil, Hisham Abushaqqaf, Sarah Mohammed Jurebi, Rana Qasem Wasly, Abdulaziz Ali Alshahrani, Hadya Alkam, Hussam Almalki, Salwa Ahmad Hakami

Endodontic infections, primarily caused due to microbial invasion into the root canal system, pose a significant challenge to dental health and management due to their complex etiology and resistance to conventional treatment. Porphyromonas gingivalis is a key bacterium pathogen that uses the Mfa1 fimbriae for its adhesion and biofilm formation contributing to its pathogenicity. The study explores the potential of Aegle marmelos leaf metabolites as a potential inhibitor of Mfa1 fimbriae using the molecular docking and simulation approach. We assessed the binding affinities of various metabolites with Rutin emerging as a promising candidate due to its strong and stable interactions within the Mfa1 active sites. The findings are also supported by existing literature that underscores the anti-microbial and anti-inflammatory properties of Aegle marmelos and its phytochemicals. The study also highlights the novelty of targeting Mfa1 fimbriae, a structure not addressed by current therapeutics.

{"title":"Harnessing the antimicrobial potential of Aegle marmelos against Mfa1 fimbriae in Porphyromonas gingivalis: a new strategy for endodontic therapy.","authors":"Nezar Boreak, Noor Eissa Mousa Jaferi, Mohammed Bashery, Hanan Salem Otudi, Abdullah Saad Almuqbil, Hisham Abushaqqaf, Sarah Mohammed Jurebi, Rana Qasem Wasly, Abdulaziz Ali Alshahrani, Hadya Alkam, Hussam Almalki, Salwa Ahmad Hakami","doi":"10.14715/cmb/2025.70.1.10","DOIUrl":"https://doi.org/10.14715/cmb/2025.70.1.10","url":null,"abstract":"<p><p>Endodontic infections, primarily caused due to microbial invasion into the root canal system, pose a significant challenge to dental health and management due to their complex etiology and resistance to conventional treatment. Porphyromonas gingivalis is a key bacterium pathogen that uses the Mfa1 fimbriae for its adhesion and biofilm formation contributing to its pathogenicity. The study explores the potential of Aegle marmelos leaf metabolites as a potential inhibitor of Mfa1 fimbriae using the molecular docking and simulation approach. We assessed the binding affinities of various metabolites with Rutin emerging as a promising candidate due to its strong and stable interactions within the Mfa1 active sites. The findings are also supported by existing literature that underscores the anti-microbial and anti-inflammatory properties of Aegle marmelos and its phytochemicals. The study also highlights the novelty of targeting Mfa1 fimbriae, a structure not addressed by current therapeutics.</p>","PeriodicalId":9802,"journal":{"name":"Cellular and molecular biology","volume":"71 1","pages":"96-101"},"PeriodicalIF":1.5,"publicationDate":"2025-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143254058","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
IL-38 attenuates renal ischemia/reperfusion injury through suppressing inflammation in mice.
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-02 DOI: 10.14715/cmb/2025.70.1.4
Decui Liang, Lanxiang Dai, Hao Sun, Linlin Li

Inflammation plays an important role in the pathogenesis of renal ischemia/reperfusion injury (IRI). Interleukin-38 (IL-38) is an emerging cytokine with multiple functions involved in infection and immunity. The present study aimed to determine whether IL-38 attenuates renal IR injury in an animal model and to identify the underlying mechanisms. For this purpose, the renal IRI model was induced by left renal pedicle clamping for 45 min and right nephrectomy in mice. All mice were intraperitoneally injected with vehicle or IL-38. Renal histology, function, apoptosis and inflammatory cytokines were assessed. mRNAs were detected by Real-time PCR. The proteins were measured by Western blot. Results showed that the expression of IL-38 mRNA and protein in kidney tissue was significantly increased at 6 h and reached a peak at 24 h after renal IRI, along with the kidney dysfunction. IL-38 significantly decreased renal IRI, as reflected by the attenuation of renal dysfunction, tubular damage and cellular apoptosis. Thus, IL-38 markedly ameliorated the survival rate after renal IRI. In addition, IL-38 significantly increased the level of cytoplasmic IκB-α and suppressed the nuclear translocation of NF-κB, which inhibited the expression and release of inflammatory cytokines. In conclusion, IL-38 significantly protects against renal IRI probably by inhibiting pro-inflammatory reactions.

{"title":"IL-38 attenuates renal ischemia/reperfusion injury through suppressing inflammation in mice.","authors":"Decui Liang, Lanxiang Dai, Hao Sun, Linlin Li","doi":"10.14715/cmb/2025.70.1.4","DOIUrl":"https://doi.org/10.14715/cmb/2025.70.1.4","url":null,"abstract":"<p><p>Inflammation plays an important role in the pathogenesis of renal ischemia/reperfusion injury (IRI). Interleukin-38 (IL-38) is an emerging cytokine with multiple functions involved in infection and immunity. The present study aimed to determine whether IL-38 attenuates renal IR injury in an animal model and to identify the underlying mechanisms. For this purpose, the renal IRI model was induced by left renal pedicle clamping for 45 min and right nephrectomy in mice. All mice were intraperitoneally injected with vehicle or IL-38. Renal histology, function, apoptosis and inflammatory cytokines were assessed. mRNAs were detected by Real-time PCR. The proteins were measured by Western blot. Results showed that the expression of IL-38 mRNA and protein in kidney tissue was significantly increased at 6 h and reached a peak at 24 h after renal IRI, along with the kidney dysfunction. IL-38 significantly decreased renal IRI, as reflected by the attenuation of renal dysfunction, tubular damage and cellular apoptosis. Thus, IL-38 markedly ameliorated the survival rate after renal IRI. In addition, IL-38 significantly increased the level of cytoplasmic IκB-α and suppressed the nuclear translocation of NF-κB, which inhibited the expression and release of inflammatory cytokines. In conclusion, IL-38 significantly protects against renal IRI probably by inhibiting pro-inflammatory reactions.</p>","PeriodicalId":9802,"journal":{"name":"Cellular and molecular biology","volume":"71 1","pages":"39-43"},"PeriodicalIF":1.5,"publicationDate":"2025-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143254304","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Diagnosis and molecular characterization of three allexiviruses infecting garlic crop in Saudi Arabia. 沙特阿拉伯大蒜作物三种过敏病毒的诊断和分子特征。
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-12 DOI: 10.14715/cmb/2024.70.12.8
Muhammad Amir, Mahmoud Amer, Zaheer Khalid, Muhammad Zaman, Mohammed Al-Saleh

Forty-four samples of garlic plants showing virus-like symptoms were collected, during the growing season (2021-2022) from different locations in Qassim province, Saudi Arabia. These samples were analyzed by ELISA against the important Allium allexiviruses including garlic virus A (GarV-A), garlic virus B (GarV-B), garlic virus C (GarV-C), and Shallot virus X (ShVX). The obtained results showed that 22/44 (50%) samples were found to be infected with one of the tested viruses. Mixed infections were detected in 13/22 samples (59.1%) with more than one virus. However, 13.6%, 0% and 27.2% were detected as single infection with GarV-A, GarV-B and GarV-C respectively. RT-PCR amplification with general allexiviruses primer (750 bp) and specific primers for GarV-A (1330 bp), GarV-B (1216 bp) and GarV-C (1557 bp) were used to detect the respective viruses. The phylogenetic tree and nucleotide sequence analysis of one of each GarV-A (OQ397541), GarV-B (OQ397542) and GarV-C (OQ397543) with general primer for allexiviruses while one isolate of each GarV-A (ON155441), GarV-B (OR343811) and two isolates of GarV-C (ON155445, and ON155446) with specific primers showed their similarity with their respective viruses from GenBank. In host range study, Chenopodium amaranticolor, Nicotiana benthamiana, N. tabacum and Allium cepa expressed necrotic lesions, mosaic and yellowing symptoms respectively against GarV-A, GarV-B and GarV-C. To our knowledge, this is the first report of GarV-A, GarV-B, and GarV-C in Saudi Arabia.

在生长季节(2021-2022年)从沙特阿拉伯卡西姆省不同地点收集了44份显示病毒样症状的大蒜植物样本。采用ELISA法对大蒜病毒A (GarV-A)、大蒜病毒B (GarV-B)、大蒜病毒C (GarV-C)和葱病毒X (ShVX)进行检测。结果显示,44份样本中有22份(50%)感染了其中一种检测病毒。13/22份样本(59.1%)存在一种以上病毒混合感染。GarV-A、GarV-B和GarV-C单次感染分别为13.6%、0%和27.2%。RT-PCR方法分别用通用抗虫病毒引物(750 bp)和GarV-A (1330 bp)、GarV-B (1216 bp)和GarV-C (1557 bp)特异引物进行扩增。GarV-A (OQ397541)、GarV-B (OQ397542)和GarV-C (OQ397543)的系统发育树和核苷酸序列分析显示,GarV-A (ON155441)、GarV-B (OR343811)和GarV-C (ON155445和ON155446)的分离物与GenBank中各自的病毒具有相似性。在宿主范围研究中,对GarV-A、GarV-B和GarV-C,苋菜藜、benthamiana、N. tabacum和Allium cepa分别表现出坏死、花叶和黄变症状。据我们所知,这是沙特阿拉伯首次报道的GarV-A、GarV-B和GarV-C。
{"title":"Diagnosis and molecular characterization of three allexiviruses infecting garlic crop in Saudi Arabia.","authors":"Muhammad Amir, Mahmoud Amer, Zaheer Khalid, Muhammad Zaman, Mohammed Al-Saleh","doi":"10.14715/cmb/2024.70.12.8","DOIUrl":"https://doi.org/10.14715/cmb/2024.70.12.8","url":null,"abstract":"<p><p>Forty-four samples of garlic plants showing virus-like symptoms were collected, during the growing season (2021-2022) from different locations in Qassim province, Saudi Arabia. These samples were analyzed by ELISA against the important Allium allexiviruses including garlic virus A (GarV-A), garlic virus B (GarV-B), garlic virus C (GarV-C), and Shallot virus X (ShVX). The obtained results showed that 22/44 (50%) samples were found to be infected with one of the tested viruses. Mixed infections were detected in 13/22 samples (59.1%) with more than one virus. However, 13.6%, 0% and 27.2% were detected as single infection with GarV-A, GarV-B and GarV-C respectively. RT-PCR amplification with general allexiviruses primer (750 bp) and specific primers for GarV-A (1330 bp), GarV-B (1216 bp) and GarV-C (1557 bp) were used to detect the respective viruses. The phylogenetic tree and nucleotide sequence analysis of one of each GarV-A (OQ397541), GarV-B (OQ397542) and GarV-C (OQ397543) with general primer for allexiviruses while one isolate of each GarV-A (ON155441), GarV-B (OR343811) and two isolates of GarV-C (ON155445, and ON155446) with specific primers showed their similarity with their respective viruses from GenBank. In host range study, Chenopodium amaranticolor, Nicotiana benthamiana, N. tabacum and Allium cepa expressed necrotic lesions, mosaic and yellowing symptoms respectively against GarV-A, GarV-B and GarV-C. To our knowledge, this is the first report of GarV-A, GarV-B, and GarV-C in Saudi Arabia.</p>","PeriodicalId":9802,"journal":{"name":"Cellular and molecular biology","volume":"70 12","pages":"59-64"},"PeriodicalIF":1.5,"publicationDate":"2025-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142969017","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Antimicrobial activity of Enterococcus-derived bacteriocins against multidrug-resistant Pseudomonas aeruginosa. 肠球菌源细菌素对多重耐药铜绿假单胞菌的抑菌活性研究。
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-12 DOI: 10.14715/cmb/2024.70.12.22
Ghufran Nazam Adul-Hur, Safa Ahmed Abed Abed, Halah Farazdaq Rafeeq, Mohsin Rasheed Mohsin, Esraa Ahmed Abdul Qader

Pseudomonas aeruginosa is a key concern in clinical settings due to its high level of resistance to antibiotics, making infections given rise to this bacterium very problematic to treat. The rise of multidrug-resistant bacteria poses a danger to treatments and stresses the necessity to find new antimicrobial drugs. In a neoteric study, P. aeruginosa was found in a suction machine tube, affirming the importance of identifying and managing potential sources of infection in healthcare facilities-many strains of Enterococcus faecium output bacteriocins, which are antimicrobial compounds. The study aimed to produce, isolate, purify, and characterize a new bacteriocin from E. Faecium found in stool samples and to investigate the effects of E. Faecium and its bacteriocin on multidrug-resistant P. aeruginosa in laboratory conditions. E. faecium is a kind of lactic acid bacteria (LAB) set up in the intestines of both humans and animals. In a study, stool specimens from 79 healthy individuals aged 5 to 35 were collected, yielding 70 isolates of Enterococcus spp. These bacteria exhibit growth in aerobic conditions and are identified through the API20 method. A crude preparation was made to extract the E. faecium bacteriocin by combining it with n-butanol in a 1:1 ml ratio in BHIB and then refining it using an ion exchange column. Through this purification process, the final specific activity of purified enterocin GH reached 38.19 U mg with a 4761.9 purification fold. The molecular weight of the E. faecium bacteriocin was determined using ion exchange chromatography. The study also examines how temperature and pH affect the activity of pure enterocin GH using Staphylococcus aureus and P. aeruginosa Type Culture Collection. Both crude and purified enterocin GH from E. faecium exhibited significant antibacterial activity against P. aeruginosa isolates when compared to the control (p<0.05). Additionally, the antibiofilm activity of enterocin GH was found to be more effective than penicillin (p<0.05) in preventing biofilm formation on the suction machine's tube.

铜绿假单胞菌是临床环境中的一个关键问题,因为它对抗生素具有高度耐药性,使得由这种细菌引起的感染很难治疗。耐多药细菌的增加给治疗带来了危险,并强调了寻找新的抗菌药物的必要性。在最近的一项研究中,在一个吸痰机管中发现了铜绿假单胞菌,这肯定了在医疗机构中识别和管理潜在感染源的重要性——许多粪肠球菌菌株输出细菌素,这是一种抗菌化合物。本研究旨在从粪便样本中发现的屎肠杆菌中产生、分离、纯化和表征一种新的细菌素,并在实验室条件下研究屎肠杆菌及其细菌素对多重耐药铜绿假单胞菌的影响。粪肠杆菌是一种存在于人类和动物肠道内的乳酸菌。在一项研究中,收集了79名5至35岁健康个体的粪便标本,分离出70株肠球菌,这些细菌在有氧条件下生长,并通过API20方法进行了鉴定。在BHIB中以1:1 ml的比例与正丁醇混合提取粪肠杆菌菌素,然后用离子交换柱提纯。通过该纯化工艺,纯化的肠球蛋白GH的最终比活性达到38.19 U mg,纯化倍数为4761.9倍。采用离子交换色谱法测定了粪肠杆菌菌素的分子量。该研究还考察了温度和pH值如何影响纯肠球菌生长激素的活性,使用金黄色葡萄球菌和铜绿假单胞菌型培养收集。与对照组相比,粪肠杆菌的粗肠球蛋白GH和纯化肠球蛋白GH对铜绿假单胞菌均表现出显著的抗菌活性
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引用次数: 0
Mechanisms and implications of antibiotic resistance in gram-positive bacterial strains. 革兰氏阳性菌株抗生素耐药的机制和意义。
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-12 DOI: 10.14715/cmb/2024.70.12.20
Naifa Alenazi

Antibiotics play a fundamental role in protecting millions of lives from infectious diseases. However, an important drawback of antibiotic treatment is that each advancement was followed by the development of resistance. This is due to the fact that the majority of pathogenic bacteria are capable of becoming resistant to a number of antimicrobial agents. There are a number of resistance mechanisms the microorganism may possess naturally or by acquisition from other microorganisms. The main mechanisms of resistance to a medication include altering its target, preventing its absorption, causing it to efflux actively, and rendering it inactive. Many types of gram-positive bacteria that cause serious infections in both the community and healthcare system are listed among the most dangerous bacteria according to the WHO's published list, which calls for the development of novel antibiotics to address the resistance issue. The following three strains, methicillin-resistant Staphylococcus aureus, vancomycin-resistant Enterococcus faecium, and penicillin-resistant Streptococcus pneumoniae, are of special importance. Therefore, this review highlighted the main mechanisms and consequences of antibiotic resistance in Gram-positive bacterial strains.

抗生素在保护数百万人免受传染病侵害方面发挥着根本作用。然而,抗生素治疗的一个重要缺点是,每一次进展都伴随着耐药性的发展。这是由于大多数致病菌能够对一些抗菌剂产生耐药性。微生物可能具有自然或从其他微生物获得的许多抗性机制。药物耐药性的主要机制包括改变其靶点、阻止其吸收、使其主动外排和使其失去活性。根据世界卫生组织公布的清单,许多在社区和卫生保健系统中引起严重感染的革兰氏阳性细菌被列为最危险的细菌,该清单呼吁开发新型抗生素来解决耐药性问题。耐甲氧西林金黄色葡萄球菌、耐万古霉素屎肠球菌和耐青霉素肺炎链球菌这三种菌株尤为重要。因此,本文综述了革兰氏阳性菌株抗生素耐药的主要机制和后果。
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引用次数: 0
Evaluation of serum levels of irisin, tumor necrosis factor and some biochemical variables in males with prostate cancer in Baghdad City. 巴格达市男性前列腺癌患者血清鸢尾素、肿瘤坏死因子及一些生化指标的评价
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-12 DOI: 10.14715/cmb/2024.70.12.21
Hanan Shihab Ahmad, Araf Sabah Abdulwahed, Marwan Abdulrazzaq Kamil

Prostate cancer is the most common type after the age of fifty. It affects males and affects the prostate gland, which protects the function of sperm by producing semen. The current study was designed to evaluate prostate cancer infection effects on some biomarkers such as irisin, Tumor necrosis factor-TNF-α, prostate acid phosphates -PAP, Glutathione-GSH, malondialdehyde-MDA, urea, and creatinine. The study was conducted on 50 males infected with prostate cancer and 30 healthy males (control group) who attended the Baghdad Teaching Hospital -Medical City Center/Baghdad, Iraq, from 20/6/2024 to 1/8/2024. The results of the current research showed a significant elevation in (Irisin, TNF-α, PAP, MDA, urea, and creatinine) concentration and a significant decrease in (GSH) concentration in the serum of patients compared to the healthy subjects in the probability of P≤0.05. Irisin and some variables are important physiological biomarkers that can support the diagnosis of prostate cancer.

前列腺癌是50岁以后最常见的类型。它影响男性并影响前列腺,前列腺通过产生精液来保护精子的功能。本研究旨在评估前列腺癌感染对一些生物标志物的影响,如鸢尾素、肿瘤坏死因子- tnf -α、前列腺酸磷酸-PAP、谷胱甘肽-谷胱甘肽、丙二醛-丙二醛、尿素和肌酐。该研究是在2024年6月20日至2024年8月1日在伊拉克巴格达的巴格达教学医院-医疗城市中心就诊的50名前列腺癌男性和30名健康男性(对照组)中进行的。本研究结果显示,患者血清(鸢尾素、TNF-α、PAP、MDA、尿素、肌酐)浓度较健康者显著升高,(GSH)浓度较健康者显著降低,P≤0.05。鸢尾素和一些变量是支持前列腺癌诊断的重要生理生物标志物。
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引用次数: 0
Functional analysis of the PIP5K1A gene in Liaoning Cashmere goats: an investigation based on bioinformatics, tissue localization, and biological functions. 辽宁绒山羊PIP5K1A基因的功能分析:基于生物信息学、组织定位和生物学功能的研究
IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-12 DOI: 10.14715/cmb/2024.70.12.6
Mei Jin, Weiyu Fan, Tianwei Xue, Linlin Cong

Liaoning cashmere goat is an outstanding breed in China primarily for cashmere production, with strict controls against genetic outflow. Melatonin(MT) is a key factor affecting cashmere growth, and preliminary transcriptome sequencing indicated that melatonin upregulates the expression of the PIP5K1A gene in skin fibroblasts. To predict the physicochemical properties of PIP5K1A in Liaoning cashmere goats, ascertain the tissue localization of PIP5K1A in their skin, and explore the role and mechanism of PIP5K1A in the proliferation of skin fibroblasts. This aims to provide new insights into improving the yield and quality of cashmere. Bioinformatics software was used to predict the physicochemical properties, hydrophobicity, signal peptides, transmembrane regions, secondary structure, subcellular localization, and conserved sites of PIP5K1A, and to construct a phylogenetic tree for the PIP5K1A gene across different species. siRNA technology was employed to interfere with PIP5K1A in skin fibroblasts; lentiviral vector construction techniques were used to overexpress PIP5K1A in skin fibroblasts; Western blot analysis detected changes in protein expression in cells; RT-qPCR was used to detect changes in gene expression; cell viability was assessed using the CCK-8 method; hair follicle structure was observed by HE staining; and immunohistochemistry was used to detect the distribution of PIP5K1A in skin hair follicles. The PIP5K1A gene in Liaoning cashmere goats encodes 573 amino acids, classified as a soluble unstable protein without signal peptides or transmembrane regions; its secondary structure is primarily random coil; it contains one conserved domain - PIPKc superfamily. Phylogenetic analysis of the PIP5K1A gene from different species shows that goats have the closest kinship with sheep. Immunohistochemistry confirmed that PIP5K1A is specifically expressed in the outer root sheath of hair follicles; melatonin promotes the expression of the PIP5K1A gene and protein level; overexpression of PIP5K1A can promote cell proliferation, whereas interference with PIP5K1A significantly reverses melatonin-induced cell proliferation; after overexpressing PIP5K1A, the expression levels of chi-miR-34c-5p and chi-miR-novel-86 are downregulated. Conclusion: PIP5K1A is located in the outer root sheath of skin hair follicles in Liaoning Cashmere Goats. Overexpression of PIP5K1A can promote the proliferation of skin fibroblasts, interference with PIP5K1A can significantly reverse cell proliferation induced by melatonin, and PIP5K1A can regulate the expression of chi-miR-34c-5p and chi-miR-novel-86 in skin fibroblasts of Liaoning cashmere goats.

辽宁绒山羊是中国主要用于羊绒生产的优秀品种,严格控制基因外流。褪黑激素(Melatonin, MT)是影响羊绒生长的关键因子,初步转录组测序显示,褪黑激素上调皮肤成纤维细胞PIP5K1A基因的表达。预测辽宁绒山羊PIP5K1A的理化性质,确定PIP5K1A在其皮肤中的组织定位,探讨PIP5K1A在皮肤成纤维细胞增殖中的作用及机制。旨在为提高羊绒产量和质量提供新的见解。利用生物信息学软件预测PIP5K1A基因的理化性质、疏水性、信号肽、跨膜区域、二级结构、亚细胞定位和保守位点,构建PIP5K1A基因在不同物种间的系统发育树。采用siRNA技术干扰皮肤成纤维细胞中的PIP5K1A;采用慢病毒载体构建技术在皮肤成纤维细胞中过表达PIP5K1A;Western blot检测细胞中蛋白表达的变化;RT-qPCR检测基因表达变化;采用CCK-8法测定细胞活力;HE染色观察毛囊结构;免疫组化检测PIP5K1A在皮肤毛囊中的分布。辽宁绒山羊PIP5K1A基因编码573个氨基酸,属于可溶性不稳定蛋白,无信号肽或跨膜区;其二级结构以无规线圈为主;它包含一个保守域- PIPKc超家族。对不同物种PIP5K1A基因的系统发育分析表明,山羊与绵羊的亲缘关系最近。免疫组化证实PIP5K1A在毛囊外根鞘特异性表达;褪黑素促进PIP5K1A基因表达及蛋白水平;过表达PIP5K1A可促进细胞增殖,而干扰PIP5K1A可显著逆转褪黑激素诱导的细胞增殖;过表达PIP5K1A后,chi-miR-34c-5p和chi-miR-novel-86的表达水平下调。结论:PIP5K1A位于辽宁绒山羊皮肤毛囊外根鞘。过表达PIP5K1A可促进皮肤成纤维细胞增殖,干扰PIP5K1A可显著逆转褪黑激素诱导的细胞增殖,PIP5K1A可调节辽宁绒山羊皮肤成纤维细胞中chi-miR-34c-5p和chi-miR-novel-86的表达。
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