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Cardiac progenitor reprogramming for heart regeneration 心脏再生的心脏祖细胞重编程
Q2 CELL & TISSUE ENGINEERING Pub Date : 2018-09-01 DOI: 10.1016/j.cr.2018.01.001
Behnam Ebrahimi

Myocardial infarction leads to the loss of a huge number of cardiomyocytes and the reparatory response to this phenomenon is scar tissue formation, which impairs heart function. Direct reprogramming technology offers an alternative strategy for the generation of functional cardiomyocytes not only in vitro, but also in vivo in the site of injury. Results have demonstrated cardiac tissue regeneration and improvement in heart function after myocardial infarction following local injection of vectors encoding reprogramming transcription factors or miRNAs. This shows the great potential of cardiac reprogramming technology for heart regeneration. However, in addition to cardiomyocytes, other cell types, including endothelial cells and smooth muscle cells are also required to be generated in the damaged area in order to achieve complete cardiac tissue regeneration. To this aim induced proliferative/expandable cardiovascular progenitor cells (iCPCs) appear to be an appropriate cell source, which is capable of differentiation into three cardiovascular lineages both in vitro and in vivo. In this regard, this study goes over in vitro and in vivo cardiac reprogramming technology and specifically deals with cardiac progenitor reprogramming and its potential for heart regeneration.

心肌梗死导致大量心肌细胞的损失,对这种现象的修复反应是瘢痕组织的形成,从而损害心脏功能。直接重编程技术不仅在体外,而且在体内损伤部位为产生功能性心肌细胞提供了另一种策略。结果表明,局部注射编码重编程转录因子或mirna的载体后,心肌梗死后心脏组织再生和心脏功能改善。这显示了心脏重编程技术在心脏再生方面的巨大潜力。然而,为了实现心脏组织的完全再生,除了心肌细胞外,还需要在受损区域产生其他类型的细胞,包括内皮细胞和平滑肌细胞。为此,诱导增殖/可扩展心血管祖细胞(iCPCs)似乎是一种合适的细胞来源,它能够在体外和体内分化为三种心血管谱系。在这方面,本研究回顾了体外和体内心脏重编程技术,并特别讨论了心脏祖细胞重编程及其在心脏再生方面的潜力。
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引用次数: 4
Genomic and molecular control of cell type and cell type conversions 细胞类型和细胞类型转化的基因组和分子控制
Q2 CELL & TISSUE ENGINEERING Pub Date : 2017-12-01 DOI: 10.1016/j.cr.2017.09.001
Xiuling Fu, Fangfang He, Yuhao Li, Allahverdi Shahveranov, Andrew Paul Hutchins

Organisms are made of a limited number of cell types that combine to form higher order tissues and organs. Cell types have traditionally been defined by their morphologies or biological activity, yet the underlying molecular controls of cell type remain unclear. The onset of single cell technologies, and more recently genomics (particularly single cell genomics), has substantially increased the understanding of the concept of cell type, but has also increased the complexity of this understanding. These new technologies have added a new genome wide molecular dimension to the description of cell type, with genome-wide expression and epigenetic data acting as a cell type ‘fingerprint’ to describe the cell state. Using these genomic fingerprints cell types are being increasingly defined based on specific genomic and molecular criteria, without necessarily a distinct biological function. In this review, we will discuss the molecular definitions of cell types and cell type control, and particularly how endogenous and exogenous transcription factors can control cell types and cell type conversions.

生物体是由数量有限的细胞类型组成的,这些细胞类型结合起来形成高级组织和器官。传统上,细胞类型是由它们的形态或生物活性来定义的,但细胞类型的潜在分子控制仍然不清楚。单细胞技术的出现,以及最近基因组学(特别是单细胞基因组学)的出现,大大增加了对细胞类型概念的理解,但也增加了这种理解的复杂性。这些新技术为描述细胞类型增加了一个新的全基因组范围的分子维度,全基因组表达和表观遗传数据作为细胞类型的“指纹”来描述细胞状态。利用这些基因组指纹,细胞类型越来越多地根据特定的基因组和分子标准来定义,而不一定是独特的生物学功能。在这篇综述中,我们将讨论细胞类型和细胞类型控制的分子定义,特别是内源性和外源性转录因子如何控制细胞类型和细胞类型转换。
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引用次数: 14
Dissecting microRNA-mediated regulation of stemness, reprogramming, and pluripotency 解剖microrna介导的干细胞、重编程和多能性调控
Q2 CELL & TISSUE ENGINEERING Pub Date : 2016-01-01 DOI: 10.1186/s13619-016-0028-0
Young Jin Lee , Suresh Ramakrishna , Himanshu Chauhan , Won Sun Park , Seok-Ho Hong , Kye-Seong Kim

Increasing evidence indicates that microRNAs (miRNAs), endogenous short non-coding RNAs 19–24 nucleotides in length, play key regulatory roles in various biological events at the post-transcriptional level. Embryonic stem cells (ESCs) represent a valuable tool for disease modeling, drug discovery, developmental studies, and potential cell-based therapies in regenerative medicine due to their unlimited self-renewal and pluripotency. Therefore, remarkable progress has been made in recent decades toward understanding the expression and functions of specific miRNAs in the establishment and maintenance of pluripotency. Here, we summarize the recent knowledge regarding the regulatory roles of miRNAs in self-renewal of pluripotent ESCs and during cellular reprogramming, as well as the potential role of miRNAs in two distinct pluripotent states (naïve and primed).

越来越多的证据表明,microRNAs (miRNAs)是内源性短的非编码rna,长度为19-24个核苷酸,在转录后水平上对各种生物事件起着关键的调节作用。胚胎干细胞(ESCs)由于其无限的自我更新和多能性,在疾病建模、药物发现、发育研究和潜在的再生医学细胞治疗中具有重要的工具价值。因此,近几十年来,在了解特异性mirna在多能性的建立和维持中的表达和功能方面取得了显著进展。在这里,我们总结了关于mirna在多能干细胞自我更新和细胞重编程过程中的调节作用的最新知识,以及mirna在两种不同的多能状态(naïve和primed)中的潜在作用。
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引用次数: 27
RNA-binding proteins in mouse male germline stem cells: a mammalian perspective 小鼠雄性生殖系干细胞中的rna结合蛋白:哺乳动物的视角
Q2 CELL & TISSUE ENGINEERING Pub Date : 2016-01-01 DOI: 10.1186/s13619-015-0022-y
Huayu Qi

Adult stem cells that reside in particular types of tissues are responsible for tissue homeostasis and regeneration. Cellular functions of adult stem cells are intricately related to the gene expression programs in those cells. Past research has demonstrated that regulation of gene expression at the transcriptional level can decisively alter cell fate of stem cells. However, cellular contents of mRNAs are sometimes not equivalent to proteins, the functional units of cells. It is increasingly realized that post-transcriptional and translational regulation of gene expression are also fundamental for stem cell functions. Compared to differentiated somatic cells, effects on cellular status manifested by varied expression of RNA-binding proteins and global protein synthesis have been demonstrated in several stem cell systems. Through the cooperation of both cis-elements of mRNAs and trans-acting RNA-binding proteins that are intimately associated with them, regulation of localization, stability, and translational status of mRNAs directly influences the self-renewal and differentiation of stem cells. Previous studies have uncovered some of the molecular mechanisms that underlie the functions of RNA-binding proteins in stem cells in invertebrate species. However, their roles in adult stem cells in mammals are just beginning to be unveiled. This review highlights some of the RNA-binding proteins that play important functions during the maintenance and differentiation of mouse male germline stem cells, the adult stem cells in the male reproductive organ.

存在于特定类型组织中的成体干细胞负责组织稳态和再生。成体干细胞的细胞功能与这些细胞中的基因表达程序有着复杂的关系。过去的研究表明,在转录水平上调控基因表达可以决定性地改变干细胞的细胞命运。然而,mrna的细胞内容物有时并不等同于细胞的功能单位蛋白质。人们越来越认识到,基因表达的转录后和翻译调控也是干细胞功能的基础。与分化的体细胞相比,rna结合蛋白和整体蛋白合成的不同表达对细胞状态的影响已在几种干细胞系统中得到证实。通过mrna的顺式元件和与其密切相关的反式作用rna结合蛋白的协同作用,mrna的定位、稳定性和翻译状态的调控直接影响干细胞的自我更新和分化。以前的研究已经揭示了一些分子机制,这些机制是无脊椎动物干细胞中rna结合蛋白功能的基础。然而,它们在哺乳动物成体干细胞中的作用才刚刚开始被揭示。本文综述了在小鼠雄性生殖器官成体干细胞维持和分化过程中发挥重要作用的rna结合蛋白。
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引用次数: 5
Loss of Mgat5a-mediated N-glycosylation stimulates regeneration in zebrafish mgat5a介导的n -糖基化缺失刺激斑马鱼再生
Q2 CELL & TISSUE ENGINEERING Pub Date : 2016-01-01 DOI: 10.1186/s13619-016-0031-5
Wuhong Pei , Sunny C. Huang , Lisha Xu , Kade Pettie , María Laura Ceci , Mario Sánchez , Miguel L. Allende , Shawn M. Burgess

Background

We are using genetics to identify genes specifically involved in hearing regeneration. In a large-scale genetic screening, we identified mgat5a, a gene in the N-glycosylation biosynthesis pathway whose activity negatively impacts hair cell regeneration.

Methods

We used a combination of mutant analysis in zebrafish and a hair cell regeneration assay to phenotype the loss of Mgat5a activity in zebrafish. We used pharmacological inhibition of N-glycosylation by swansonine. We also used over-expression analysis by mRNA injections to demonstrate how changes in N-glycosylation can alter cell signaling.

Results

We found that mgat5a was expressed in multiple tissues during zebrafish embryo development, particularly enriched in neural tissues including the brain, retina, and lateral line neuromasts. An mgat5a insertional mutation and a CRISPR/Cas9-generated truncation mutation both caused an enhancement of hair cell regeneration which could be phenocopied by pharmacological inhibition with swansonine. In addition to hair cell regeneration, inhibition of the N-glycosylation pathway also enhanced the regeneration of lateral line axon and caudal fins. Further analysis showed that N-glycosylation altered the responsiveness of TGF-beta signaling.

Conclusions

The findings from this study provide experimental evidence for the involvement of N-glycosylation in tissue regeneration and cell signaling.

我们正在使用遗传学来识别与听力再生有关的基因。在大规模的遗传筛选中,我们发现了n -糖基化生物合成途径中的一个基因mgat5a,其活性对毛细胞再生产生负面影响。方法采用斑马鱼突变体分析和毛细胞再生实验相结合的方法对斑马鱼Mgat5a活性缺失进行表型分析。我们用药物抑制了天鹅皂苷的n -糖基化。我们还使用mRNA注射的过表达分析来证明n -糖基化的变化如何改变细胞信号传导。结果我们发现mgat5a在斑马鱼胚胎发育过程中在多个组织中表达,特别是在大脑、视网膜和侧线神经突等神经组织中富集。mgat5a插入突变和CRISPR/ cas9产生的截断突变都能促进毛细胞再生,这可以通过天鹅皂苷的药理抑制来表型。除毛细胞再生外,抑制n -糖基化通路还能促进侧线轴突和尾鳍的再生。进一步分析表明,n -糖基化改变了tgf - β信号的反应性。结论本研究结果为n -糖基化参与组织再生和细胞信号转导提供了实验证据。
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引用次数: 8
Enzymatic and non-enzymatic isolation systems for adipose tissue-derived cells: current state of the art 用于脂肪组织来源细胞的酶和非酶分离系统:本技术的当前状态
Q2 CELL & TISSUE ENGINEERING Pub Date : 2015-01-01 DOI: 10.1186/s13619-015-0020-0
Eleni Oberbauer , Carolin Steffenhagen , Christoph Wurzer , Christian Gabriel , Heinz Redl , Susanne Wolbank

In the past decade, adipose tissue became a highly interesting source of adult stem cells for plastic surgery and regenerative medicine. The isolated stromal vascular fraction (SVF) is a heterogeneous cell population including the adipose-derived stromal/stem cells (ASC), which showed regenerative potential in several clinical studies and trials. SVF should be provided in a safe and reproducible manner in accordance with current good manufacturing practices (cGMP). To ensure highest possible safety for patients, a precisely defined procedure with a high-quality control is required. Hence, an increasing number of adipose tissue-derived cell isolation systems have been developed. These systems aim for a closed, sterile, and safe isolation process limiting donor variations, risk for contaminations, and unpredictability of the cell material. To isolate SVF from adipose tissue, enzymes such as collagenase are used. Alternatively, in order to avoid enzymes, isolation systems using physical forces are available. Here, we provide an overview of known existing enzymatic and non-enzymatic adipose tissue-derived cell isolation systems, which are patented, published, or already on the market.

在过去的十年里,脂肪组织成为整形外科和再生医学中非常有趣的成体干细胞来源。分离的基质血管组分(SVF)是一种异质细胞群,包括脂肪来源的基质/干细胞(ASC),在一些临床研究和试验中显示出再生潜力。SVF应按照现行良好生产规范(cGMP)以安全和可重复的方式提供。为了确保患者的最高安全性,需要一个精确定义的高质量控制程序。因此,越来越多的脂肪组织来源的细胞分离系统已经被开发出来。这些系统旨在实现封闭、无菌和安全的分离过程,限制供体变异、污染风险和细胞材料的不可预测性。要从脂肪组织中分离SVF,需要使用胶原酶等酶。或者,为了避免酶,可以使用物理力分离系统。在这里,我们提供了已知现有的酶和非酶脂肪组织源性细胞分离系统的概述,这些系统已获得专利,已发表或已上市。
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引用次数: 2
Regulatory functions and pathological relevance of the MECP2 3′UTR in the central nervous system MECP2 3'UTR在中枢神经系统中的调控功能及其病理相关性
Q2 CELL & TISSUE ENGINEERING Pub Date : 2015-01-01 DOI: 10.1186/s13619-015-0023-x
Heather McGowan , Zhiping P. Pang

Methyl-CpG-binding protein 2 (MeCP2), encoded by the gene MECP2, is a transcriptional regulator and chromatin-remodeling protein, which is ubiquitously expressed and plays an essential role in the development and maintenance of the central nervous system (CNS). Highly enriched in post-migratory neurons, MeCP2 is needed for neuronal maturation, including dendritic arborization and the development of synapses. Loss-of-function mutations in MECP2 cause Rett syndrome (RTT), a debilitating neurodevelopmental disorder characterized by a phase of normal development, followed by the progressive loss of milestones and cognitive disability. While a great deal has been discovered about the structure, function, and regulation of MeCP2 in the time since its discovery as the genetic cause of RTT, including its involvement in a number of RTT-related syndromes that have come to be known as MeCP2-spectrum disorders, much about this multifunctional protein remains enigmatic. One unequivocal fact that has become apparent is the importance of maintaining MeCP2 protein levels within a narrow range, the limits of which may depend upon the cell type and developmental time point. As such, MeCP2 is amenable to complex, multifactorial regulation. Here, we summarize the role of the MECP2 3' untranslated region (UTR) in the regulation of MeCP2 protein levels and how mutations in this region contribute to autism and other non-RTT neuropsychiatric disorders.

甲基cpg结合蛋白2 (methyl - cpg binding protein 2, MeCP2)是由MeCP2基因编码的一种转录调控蛋白和染色质重塑蛋白,在中枢神经系统(central nervous system, CNS)的发育和维持中普遍表达,起着至关重要的作用。MeCP2在迁移后神经元中高度富集,是神经元成熟所必需的,包括树突树突和突触的发育。MECP2的功能缺失突变导致Rett综合征(RTT),这是一种衰弱性神经发育障碍,其特征是正常发育阶段的逐渐丧失和认知障碍。虽然自从发现MeCP2是RTT的遗传原因以来,人们已经发现了大量关于MeCP2的结构、功能和调控,包括它参与了许多被称为MeCP2谱系疾病的RTT相关综合征,但关于这种多功能蛋白的很多信息仍然是谜。一个显而易见的事实是,将MeCP2蛋白水平维持在一个狭窄范围内的重要性,其限制可能取决于细胞类型和发育时间点。因此,MeCP2可以接受复杂的多因子调控。在这里,我们总结了MECP2 3'非翻译区(UTR)在MECP2蛋白水平调控中的作用,以及该区域的突变如何导致自闭症和其他非rtt神经精神疾病。
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引用次数: 11
Reprogramming barriers and enhancers: strategies to enhance the efficiency and kinetics of induced pluripotency 重编程障碍和增强因子:提高诱导多能性效率和动力学的策略
Q2 CELL & TISSUE ENGINEERING Pub Date : 2015-01-01 DOI: 10.1186/s13619-015-0024-9
Behnam Ebrahimi

Induced pluripotent stem cells are powerful tools for disease modeling, drug screening, and cell transplantation therapies. These cells can be generated directly from somatic cells by ectopic expression of defined factors through a reprogramming process. However, pluripotent reprogramming is an inefficient process because of various defined and unidentified barriers. Recent studies dissecting the molecular mechanisms of reprogramming have methodically improved the quality, ease, and efficiency of reprogramming. Different strategies have been applied for enhancing reprogramming efficiency, including depletion/inhibition of barriers (p53, p21, p57, p16Ink4a/p19Arf, Mbd3, etc.), overexpression of enhancing genes (e.g., FOXH1, C/EBP alpha, UTF1, and GLIS1), and administration of certain cytokines and small molecules. The current review provides an in-depth overview of the cutting-edge findings regarding distinct barriers of reprogramming to pluripotency and strategies to enhance reprogramming efficiency. By incorporating the mechanistic insights from these recent findings, a combined method of inhibition of roadblocks and application of enhancing factors may yield the most reliable and effective approach in pluripotent reprogramming.

诱导多能干细胞是疾病建模、药物筛选和细胞移植治疗的有力工具。这些细胞可以通过重编程过程通过定义因子的异位表达直接从体细胞产生。然而,多能重编程是一个低效的过程,因为有各种明确的和未知的障碍。最近的研究剖析了重编程的分子机制,系统地提高了重编程的质量、简易性和效率。已经应用了不同的策略来提高重编程效率,包括消耗/抑制屏障(p53, p21, p57, p16Ink4a/p19Arf, Mbd3等),增强基因(例如FOXH1, C/EBP α, UTF1和GLIS1)的过表达,以及某些细胞因子和小分子的管理。当前的综述深入概述了重编程对多能性的不同障碍和提高重编程效率的策略方面的最新发现。通过结合这些最近发现的机制见解,一种抑制障碍和应用增强因子的联合方法可能会产生多能重编程中最可靠和有效的方法。
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引用次数: 78
Stem cell aging in adult progeria 成人早衰症的干细胞老化
Q2 CELL & TISSUE ENGINEERING Pub Date : 2015-01-01 DOI: 10.1186/s13619-015-0021-z
Hoi-Hung Cheung , Duanqing Pei , Wai-Yee Chan

Aging is considered an irreversible biological process and also a major risk factor for a spectrum of geriatric diseases. Advanced age-related decline in physiological functions, such as neurodegeneration, development of cardiovascular disease, endocrine and metabolic dysfunction, and neoplastic transformation, has become the focus in aging research. Natural aging is not regarded as a programmed process. However, accelerated aging due to inherited genetic defects in patients of progeria is programmed and resembles many aspects of natural aging. Among several premature aging syndromes, Werner syndrome (WS) and Hutchinson–Gilford progeria syndrome (HGPS) are two broadly investigated diseases. In this review, we discuss how stem cell aging in WS helps us understand the biology of aging. We also discuss briefly how the altered epigenetic landscape in aged cells can be reversed to a “juvenile” state. Lastly, we explore the potential application of the latest genomic editing technique for stem cell-based therapy and regenerative medicine in the context of aging.

衰老被认为是一个不可逆转的生物过程,也是一系列老年病的主要危险因素。衰老相关的生理功能衰退,如神经退行性变、心血管疾病的发展、内分泌和代谢功能障碍、肿瘤转化等,已成为衰老研究的重点。自然衰老不被认为是一个程序化的过程。然而,早衰症患者由于遗传缺陷导致的加速衰老是程序化的,与自然衰老的许多方面相似。在几种早衰综合征中,Werner综合征(WS)和Hutchinson-Gilford progeria syndrome (HGPS)是两种被广泛研究的疾病。在这篇综述中,我们讨论了WS中的干细胞衰老如何帮助我们理解衰老的生物学。我们还简要讨论了如何改变的表观遗传景观在衰老细胞可以逆转到一个“少年”状态。最后,我们探讨了最新的基因组编辑技术在干细胞治疗和再生医学中的潜在应用。
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引用次数: 7
GATA2−/− human ESCs undergo attenuated endothelial to hematopoietic transition and thereafter granulocyte commitment GATA2−/−人ESCs经历内皮细胞向造血细胞的转变,然后是粒细胞的承诺
Q2 CELL & TISSUE ENGINEERING Pub Date : 2015-01-01 DOI: 10.1186/s13619-015-0018-7
Ke Huang , Juan Du , Ning Ma , Jiajun Liu , Pengfei Wu , Xiaoya Dong , Minghui Meng , Wenqian Wang , Xin Chen , Xi Shi , Qianyu Chen , Zhongzhou Yang , Shubin Chen , Jian Zhang , Yuhang Li , Wei Li , Yi Zheng , Jinglei Cai , Peng Li , Xiaofang Sun , Guangjin Pan

Background

Hematopoiesis is a progressive process collectively controlled by an elaborate network of transcription factors (TFs). Among these TFs, GATA2 has been implicated to be critical for regulating multiple steps of hematopoiesis in mouse models. However, whether similar function of GATA2 is conserved in human hematopoiesis, especially during early embryonic development stage, is largely unknown.

Results

To examine the role of GATA2 in human background, we generated homozygous GATA2 knockout human embryonic stem cells (GATA2−/− hESCs) and analyzed their blood differentiation potential. Our results demonstrated that GATA2−/− hESCs displayed attenuated generation of CD34+CD43+ hematopoietic progenitor cells (HPCs), due to the impairment of endothelial to hematopoietic transition (EHT). Interestingly, GATA2−/− hESCs retained the potential to generate erythroblasts and macrophages, but never granulocytes. We further identified that SPI1 downregulation was partially responsible for the defects of GATA2−/− hESCs in generation of CD34+CD43+ HPCs and granulocytes. Furthermore, we found that GATA2−/− hESCs restored the granulocyte potential in the presence of Notch signaling.

Conclusion

Our findings revealed the essential roles of GATA2 in EHT and granulocyte development through regulating SPI1, and uncovered a role of Notch signaling in granulocyte generation during hematopoiesis modeled by human ESCs.

造血是一个渐进的过程,由一个复杂的转录因子网络共同控制。在这些tf中,GATA2在小鼠模型中被认为对调节造血的多个步骤至关重要。然而,GATA2的类似功能是否在人类造血,特别是在早期胚胎发育阶段被保守,在很大程度上是未知的。结果为了研究GATA2在人类背景中的作用,我们制备了纯合子GATA2敲除的人胚胎干细胞(GATA2−/−hESCs),并分析了其血液分化潜力。我们的研究结果表明,由于内皮到造血转化(EHT)的损伤,GATA2−/−hESCs表现出CD34+CD43+造血祖细胞(HPCs)的衰减生成。有趣的是,GATA2−/−hESCs保留了产生红细胞和巨噬细胞的潜力,但从未产生粒细胞。我们进一步发现,SPI1下调是产生CD34+CD43+ HPCs和粒细胞时GATA2−/−hESCs缺陷的部分原因。此外,我们发现GATA2−/−hESCs在Notch信号存在的情况下恢复了粒细胞潜能。我们的研究结果揭示了GATA2通过调节SPI1在EHT和粒细胞发育中的重要作用,并揭示了Notch信号在人类ESCs模型造血过程中粒细胞生成的作用。
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引用次数: 29
期刊
Cell Regeneration
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