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Transgene-free mouse embryo models from chemical reprogramming reach early organogenesis. 化学重编程的无转基因小鼠胚胎模型达到早期器官发生。
IF 4.7 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-09-04 DOI: 10.1186/s13619-025-00259-5
Xiu Yu, Jichang Wang

Embryo models derived from pluripotent stem cells (PSCs) have become powerful tools for dissecting mammalian embryonic development and advancing regenerative medicine. Two recent studies in Cell and Cell Stem Cell report major advances in generating mouse embryo models that replicate development up to early organogenesis (equivalent to embryonic day 8.5~8.75). Li et al. describe a purely chemical strategy to reprogram mouse embryonic stem cells (mESCs) into induced embryo founder cells (iEFCs) capable of forming complete embryo models (iEFC-EMs). In parallel, Yilmaz et al. demonstrate transgene-free generation of post-gastrulation models (TF-SEMs) from naive mESCs and induced pluripotent stem cells (iPSCs) using a similar chemical cocktail. Both models faithfully recapitulate key developmental events, including gastrulation, neural tube formation, cardiogenesis, and somitogenesis. These advances not only deepen understanding of early mammalian development but also pave the way for applications in regenerative medicine and disease modeling.

多能干细胞(PSCs)衍生的胚胎模型已成为解剖哺乳动物胚胎发育和推进再生医学的有力工具。《细胞》和《细胞干细胞》杂志最近的两项研究报告了在制造复制早期器官发生(相当于胚胎期8.5~8.75天)发育的小鼠胚胎模型方面取得的重大进展。Li等人描述了一种纯化学策略,将小鼠胚胎干细胞(mESCs)重编程为能够形成完整胚胎模型(iEFC-EMs)的诱导胚胎建立细胞(iEFC-EMs)。与此同时,Yilmaz等人证明了使用类似的化学混合物,从原始mESCs和诱导多能干细胞(iPSCs)中产生无转基因的原肠胚形成后模型(TF-SEMs)。这两种模型都忠实地概括了关键的发育事件,包括原肠胚形成、神经管形成、心脏发生和躯体发生。这些进展不仅加深了对早期哺乳动物发育的理解,而且为再生医学和疾病建模的应用铺平了道路。
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引用次数: 0
Correction: Consistent apparent Young's modulus of human embryonic stem cells and derived cell types stabilized by substrate stiffness regulation promotes lineage specificity maintenance. 更正:通过底物刚度调节稳定的人类胚胎干细胞和衍生细胞类型的一致表观杨氏模量促进谱系特异性维持。
IF 4.7 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-08-18 DOI: 10.1186/s13619-025-00252-y
Anqi Guo, Bingjie Wang, Cheng Lyu, Wenjing Li, Yaozu Wu, Lu Zhu, Ran Bi, Chenyu Huang, Jiao Jiao Li, Yanan Du
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引用次数: 0
Integrative analysis and experimental validation identify the role of CD44 and Nucleolin in regulating gliogenesis following spinal cord injury. 综合分析和实验验证确定了CD44和核蛋白在脊髓损伤后神经胶质瘤发生中的作用。
IF 4.7 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-08-13 DOI: 10.1186/s13619-025-00253-x
Ming Shi, Yazhou Sun, Lu Ding, Xinyue Li, Qi Xu, Fuxin Wei, Tianshun Gao, David Y B Deng

Spinal cord injury (SCI) triggers a complex cascade of cellular and molecular responses, yet the complex cellular communication remains incompletely understood. This study explored how intercellular communication contributes to the activation of microglia and astrocytes after SCI. Here, we integrated four datasets using single-cell RNA sequencing (scRNA-seq) or single-nucleus RNA sequencing (snRNA-seq) and constructed a comprehensive cellular atlas of the injured spinal cord. Transcriptomic changes in microglia and astrocytes were analyzed. We identified CD44 as a key receptor in SPP1-mediated microglial activation, which represented a subpopulation involved in inflammatory response in microglia. We defined a gliogenesis subpopulation of astrocytes that emerged at 3 dpi, which became the predominant cell type in the injured spinal cord. These astrocytes highly expressed the Nucleolin (Ncl) gene and interacted via the Pleiotrophin (Ptn) signaling pathway, which is associated with astrocyte proliferation. To validate these findings, we utilized a crush injury model. Flow cytometry of isolated microglia and astrocytes confirmed the upregulation of CD44 in microglia and NCL in astrocytes in response to SCI. In vivo results confirmed that the CD44 positive microglia accumulated and PLA results further confirmed the combination of SPP1 with CD44. In parallel, the upregulated expression of NCL in astrocytes facilitated their proliferation, underscoring the role of the NCL receptor in gliogenesis after SCI. In vitro validation demonstrated that exogenous SPP1 upregulates CD44 expression by promoting the phosphorylation of p65 and activating the NF-κB pathways in BV2 microglia, and that high expression of IL-6 indicates the activation of inflammation. PTN may enhance NCL expression and thus facilitates astrocyte proliferation. Collectively, our study identified key receptors that regulated inflammation responses and gliogenesis. Targeting the CD44 and NCL receptors may provide promising therapeutic strategies to modulate inflammation and promote tissue repair after SCI.

脊髓损伤(SCI)引发了一系列复杂的细胞和分子反应,但复杂的细胞通讯仍未完全了解。本研究探讨了脊髓损伤后细胞间通讯如何促进小胶质细胞和星形胶质细胞的激活。在这里,我们使用单细胞RNA测序(scRNA-seq)或单核RNA测序(snRNA-seq)整合了四个数据集,构建了损伤脊髓的综合细胞图谱。分析小胶质细胞和星形胶质细胞的转录组变化。我们发现CD44是spp1介导的小胶质细胞激活的关键受体,它代表了参与小胶质细胞炎症反应的亚群。我们定义了在3 dpi时出现的星形胶质细胞的胶质形成亚群,它成为损伤脊髓中的主要细胞类型。这些星形胶质细胞高度表达核仁蛋白(Ncl)基因,并通过多营养蛋白(Ptn)信号通路相互作用,这与星形胶质细胞增殖有关。为了验证这些发现,我们使用了挤压损伤模型。分离的小胶质细胞和星形胶质细胞的流式细胞术证实了小胶质细胞CD44和星形胶质细胞NCL在脊髓损伤后的上调。体内结果证实了CD44阳性小胶质细胞的积累,PLA结果进一步证实了SPP1与CD44的结合。同时,星形胶质细胞中NCL表达的上调促进了它们的增殖,强调了NCL受体在脊髓损伤后胶质细胞形成中的作用。体外验证表明,外源性SPP1通过促进BV2小胶质细胞p65的磷酸化和激活NF-κB通路上调CD44的表达,IL-6的高表达表明炎症激活。PTN可增强NCL表达,促进星形胶质细胞增殖。总的来说,我们的研究确定了调节炎症反应和胶质形成的关键受体。靶向CD44和NCL受体可能为脊髓损伤后调节炎症和促进组织修复提供了有希望的治疗策略。
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引用次数: 0
Female germline stem cells: recent advances, opportunities, and challenges to overcome. 女性生殖系干细胞:最新进展、机遇和需要克服的挑战。
IF 4.7 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-08-12 DOI: 10.1186/s13619-025-00256-8
Yaoqi Huang, Haifeng Ye

In the field of reproductive medicine, delaying ovarian aging and preserving fertility in cancer patients have long been core issues and relentless pursuits. Female germline stem cells (FGSCs) have been shown to repair aging or damaged ovarian structures and to restore ovarian reproductive and endocrine function. With their unlimited proliferation and directed differentiation into oocytes, FGSCs bring new hope to patients with ovarian insufficiency, malignant tumors, and others needing fertility preservation. In this review, we introduce the role of FGSCs in ovarian fertility preservation and regenerative repair, emphasizing the regulatory pathways of FGSCs in restoring ovarian function. We discuss the unique advantages of FGSCs in infertility treatment, including fertility preservation, animal gene editing, and regenerative medicine. This article aims to offer new research insights for advancing the clinical translation of FGSCs by exploring them from multiple perspectives, such as origin, regulation, and application.

在生殖医学领域,延缓卵巢衰老和保留癌症患者的生育能力一直是核心问题和不懈的追求。女性生殖系干细胞(FGSCs)已被证明可以修复衰老或受损的卵巢结构,并恢复卵巢的生殖和内分泌功能。FGSCs具有无限增殖和定向分化为卵母细胞的功能,为卵巢功能不全、恶性肿瘤等需要保留生育能力的患者带来了新的希望。本文综述了FGSCs在卵巢生育能力保存和再生修复中的作用,重点介绍了FGSCs在恢复卵巢功能中的调控途径。我们讨论了FGSCs在不孕症治疗中的独特优势,包括生育能力保存、动物基因编辑和再生医学。本文旨在从起源、调控和应用等多个角度对FGSCs进行探讨,为推进FGSCs的临床转化提供新的研究见解。
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引用次数: 0
The comprehensive progress of tooth regeneration from the tooth development to tissue engineering and clinical application. 牙齿再生从牙齿发育到组织工程和临床应用的全面进展。
IF 4.7 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-07-31 DOI: 10.1186/s13619-025-00249-7
Yi Sui, Ziqi Zhou, Siqi Zhang, Zhigang Cai

The advancement of tooth regeneration has offered revolutionary progress in the treatment of tooth defects and tooth loss, particularly in whole-tooth regeneration, pulp-dentin regeneration, and enamel regeneration. This review comprehensively analyzes the latest research progress in the biological foundations of tooth regeneration, stem cell applications, and tissue engineering technologies while discussing the prospects for clinical translation of these technologies. At present, pulp-dentin regeneration technology has entered clinical trials and demonstrated preliminary efficacy; however, the maturity and controllability of this technology require further enhancement. In situ whole-tooth regeneration has been achieved in animal models but still confronts ethical and functional challenges. Although the development of new materials has provided novel strategies for the epitaxial growth of enamel, enamel regeneration remains in its early stages. Tissue engineering technologies offer new avenues for tooth regeneration but still need to address issues such as immune rejection and long-term stability to realize the clinical application of tooth regeneration technologies.

牙齿再生技术的发展为牙齿缺损和牙齿脱落的治疗提供了革命性的进展,特别是在全牙再生、牙本质再生和牙釉质再生方面。本文综合分析了牙齿再生的生物学基础、干细胞应用和组织工程技术的最新研究进展,并对这些技术的临床应用前景进行了展望。目前,牙本质-牙髓再生技术已进入临床试验阶段,并显示出初步疗效;但该技术的成熟度和可控性有待进一步提高。原位全牙再生已在动物模型中实现,但仍面临伦理和功能方面的挑战。虽然新材料的发展为牙釉质外延生长提供了新的策略,但牙釉质再生仍处于早期阶段。组织工程技术为牙齿再生提供了新的途径,但要实现牙齿再生技术的临床应用,还需要解决诸如免疫排斥和长期稳定性等问题。
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引用次数: 0
Identification of a 10-species microbial signature of inflammatory bowel disease by machine learning and external validation. 通过机器学习和外部验证鉴定炎症性肠病的10种微生物特征。
IF 4 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-07-14 DOI: 10.1186/s13619-025-00246-w
Shicheng Yu, Jun Li, Zhaofeng Ye, Mengxian Zhang, Xiaohua Guo, Xu Wang, Liansheng Liu, Yalong Wang, Xin Zhou, Wei Fu, Michael Q Zhang, Ye-Guang Chen

Genetic and microbial factors influence inflammatory bowel disease (IBD), prompting our study on non-invasive biomarkers for enhanced diagnostic precision. Using the XGBoost algorithm and variable analysis and the published metadata, we developed the 10-species signature XGBoost classification model (XGB-IBD10). By using distinct species signatures and prior machine and deep learning models and employing standardization methods to ensure comparability between metagenomic and 16S sequencing data, we constructed classification models to assess the XGB-IBD10 precision and effectiveness. XGB-IBD10 achieved a notable accuracy of 0.8722 in testing samples. In addition, we generated metagenomic sequencing data from collected 181 stool samples to validate our findings, and the model reached an accuracy of 0.8066. The model's performance significantly improved when trained on high-quality data from the Chinese population. Furthermore, the microbiome-based model showed promise in predicting active IBD. Overall, this study identifies promising non-invasive biomarkers associated with IBD, which could greatly enhance diagnostic accuracy.

遗传和微生物因素影响炎症性肠病(IBD),促使我们研究非侵入性生物标志物以提高诊断精度。利用XGBoost算法和变量分析,结合已发表的元数据,建立了10种特征的XGBoost分类模型(XGB-IBD10)。通过使用不同的物种特征和先验机器和深度学习模型,并采用标准化方法确保宏基因组和16S测序数据之间的可比性,我们构建了分类模型来评估XGB-IBD10的精度和有效性。XGB-IBD10在测试样本中取得了0.8722的显著精度。此外,我们从收集的181份粪便样本中生成宏基因组测序数据来验证我们的发现,该模型达到了0.8066的精度。当使用来自中国人口的高质量数据进行训练时,该模型的性能显著提高。此外,基于微生物组的模型在预测活动性IBD方面显示出希望。总的来说,本研究确定了与IBD相关的有前途的非侵入性生物标志物,可以大大提高诊断准确性。
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引用次数: 0
Correction: Human induced pluripotent stem cells derived neutrophils display strong anti-microbial potencies. 更正:人类诱导多能干细胞衍生的中性粒细胞显示出很强的抗菌能力。
IF 4 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-07-10 DOI: 10.1186/s13619-025-00254-w
Xing Hu, Baoqiang Kang, Mingquan Wang, Huaisong Lin, Zhiyong Liu, Zhishuai Zhang, Jiaming Gu, Yuchan Mai, Xinrui Guo, Wanli Ma, Han Yan, Shuoting Wang, Jingxi Huang, Junwei Wang, Jian Zhang, Tianyu Zhang, Bo Feng, Yanling Zhu, Guangjin Pan
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引用次数: 0
Correction: Image-based evaluation of single-cell mechanics using deep learning. 更正:使用深度学习对单细胞力学进行基于图像的评估。
IF 4 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-07-09 DOI: 10.1186/s13619-025-00251-z
Zhaozhao Wu, Yiting Feng, Ran Bi, Zhiqiang Liu, Yudi Niu, Yuhong Jin, Wenjing Li, Huijun Chen, Yan Shi, Yanan Du
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引用次数: 0
Schwann cells modified to secrete MANF is a potential cellular therapy for peripheral nerve regeneration. 雪旺细胞修饰分泌MANF是一种潜在的周围神经再生细胞疗法。
IF 4 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-07-07 DOI: 10.1186/s13619-025-00247-9
Bhadrapriya Sivakumar, Caleb Hammond, Valeria Martinez, Nickson Joseph, Johnson V John, Anil Kumar, Anand Krishnan

Effective therapies for peripheral nerve repair are still lacking despite active research in this field over the past years. The limited knowledge of biomolecules that equally promote axon regeneration and glial cell dynamics, which are critical for nerve regeneration, poses a major challenge in developing effective therapies. Here, we showed that the neurotrophic factor mesencephalic astrocyte-derived neurotrophic factor (MANF) equally promotes axon regeneration and glial cell dynamics favorable for nerve regeneration. Using adult rodent models, we showed that the endogenous expression of MANF is restricted to non-peptidergic sensory neurons. However, supplementation of exogenous MANF promoted the growth of all subtypes of adult sensory neurons. We also demonstrated that exogenous MANF promotes the proliferation and migration of adult primary Schwann Cells (SCs). Furthermore, we showed that local and repeated administration of MANF to injured nerves promotes axon regeneration in mice models. Finally, we devised a therapeutic approach by programming nerve-resident SCs to locally and continuously deliver MANF to injured nerves and showed that this approach improves axon regeneration. Overall, this work developed a therapeutic approach by harnessing the power of SCs as a local delivery system for MANF for nerve repair.

尽管近年来在这一领域进行了积极的研究,但仍然缺乏有效的修复周围神经的方法。对神经再生至关重要的促进轴突再生和神经胶质细胞动力学的生物分子的了解有限,这对开发有效的治疗方法提出了重大挑战。在这里,我们发现神经营养因子中脑星形细胞来源的神经营养因子(MANF)同样促进轴突再生和有利于神经再生的胶质细胞动力学。使用成年啮齿动物模型,我们发现内源性MANF的表达仅限于非肽能感觉神经元。然而,外源性MANF的补充促进了所有亚型成人感觉神经元的生长。我们还证明了外源性MANF促进成年原代雪旺细胞(SCs)的增殖和迁移。此外,我们发现局部和重复给药MANF损伤神经促进轴突再生小鼠模型。最后,我们设计了一种治疗方法,通过编程神经驻留SCs,使其局部持续地向受损神经输送MANF,并表明这种方法可以改善轴突再生。总的来说,这项工作开发了一种治疗方法,利用SCs作为神经修复的局部输送系统。
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引用次数: 0
Impact of exercise-induced alterations on gut microbiota diversity and composition: comparing effects of different training modalities. 运动诱导的肠道微生物群多样性和组成改变的影响:比较不同训练方式的效果。
IF 4 Q2 CELL & TISSUE ENGINEERING Pub Date : 2025-07-02 DOI: 10.1186/s13619-025-00244-y
Yihan Wang, Shuang Bai, Tiance Yang, Jianjun Guo, Xiaoming Zhu, Ying Dong

Exercise has been shown to influence gut microbiota composition, but the specific effects of different exercise modalities on microbial diversity remain unclear. Understanding these differences is essential for optimizing exercise programs to enhance both physical fitness and gut health. This study compared the gut microbiota profiles of participants undergoing moderate-intensity continuous training (MICT), high-intensity interval training (HIIT), and high-intensity functional training (HIFT) using 16S rRNA gene sequencing. Thirty-one previously untrained healthy university students were randomly assigned into MICT (n = 7), HIIT (n = 12) and HIFT (n = 12). The results revealed that distinct gut microbiome profiles in participants under different exercise modes. Notably, the alpha-diversity gradually increased from the MICT group to the HIFT group. In addition, there was a progressive shift towards a Faecalibacterium-dominated microbial type from HIIT to HIFT group compared to MICT group. Individuals in the HIFT group were identified to be enriched with Lactobacillus and Limosilactobacillus, along with reduced Actinomyces and Anaeromassilibacillus. Functionally, the KEGG pathway and enzyme analysis using PICRUST2 revealed that the HIFT group exhibited prominence in muscle function-related pathways and enzymes, specifically ko00280 (valine, leucine, and isoleucine degradation), as well as the enzyme EC: 3.4.11.14 (alanine aminopeptidase). In conclusion, these findings highlight how exercise modality influences gut microbial diversity, with HIFT promoting a more favorable microbial profile compared to traditional endurance training. Understanding these effects can help tailor exercise programs to improve both fitness and gut health.

运动已被证明会影响肠道微生物群的组成,但不同的运动方式对微生物多样性的具体影响尚不清楚。了解这些差异对于优化锻炼计划以增强身体健康和肠道健康至关重要。本研究使用16S rRNA基因测序比较了接受中等强度连续训练(MICT)、高强度间歇训练(HIIT)和高强度功能训练(HIFT)的参与者的肠道微生物群特征。31名未经训练的健康大学生被随机分为MICT组(n = 7)、HIIT组(n = 12)和HIFT组(n = 12)。结果显示,在不同的运动模式下,参与者的肠道微生物群特征不同。值得注意的是,从MICT组到HIFT组,α -多样性逐渐增加。此外,与MICT组相比,HIIT组向HIFT组逐渐转变为faecalibacterium主导的微生物类型。HIFT组的个体被鉴定为富含乳酸杆菌和乳酸杆菌,以及减少的放线菌和厌氧massilibacillus。功能上,KEGG通路和PICRUST2酶分析显示,HIFT组在肌肉功能相关通路和酶方面表现突出,特别是ko00280(缬氨酸、亮氨酸和异亮氨酸降解)和EC: 3.4.11.14(丙氨酸氨基肽酶)。总之,这些发现强调了运动方式如何影响肠道微生物多样性,与传统的耐力训练相比,高强度训练促进了更有利的微生物特征。了解这些影响可以帮助制定锻炼计划,以改善健康和肠道健康。
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引用次数: 0
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Cell Regeneration
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