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From Water Under Confinement to Understanding Life at Subzero Temperatures. 从封闭的水到了解零下温度下的生命。
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-30 DOI: 10.2533/chimia.2024.659
Yang Yao

Water in confined geometries is highly relevant to biology, geology, and other fields where the function and properties of materials are significantly influenced by the presence and behavior of water in these environments. The structure and dynamics of confined water are strongly dependent on the confining geometry and its interaction with the interfaces. This review provides a brief overview of water under nano-sized hard and soft confinement, as well as water in living cells and in the hydration shells around biomolecules. Confined water exhibits distinct characteristics compared to bulk water, particularly in terms of nucleation, crystallization, molecular dynamics, and hydrogen bond network. In nano-sized confinements, water can remain in liquid state at extremely low temperatures (from -45 °C to -120 °C, at atmospheric pressure), offering insights into the fundamental physics of water and potentially enhancing our understanding of life in subzero temperature environments.

封闭几何中的水与生物学、地质学和其他领域高度相关,在这些领域中,材料的功能和特性受到这些环境中水的存在和行为的重大影响。封闭水的结构和动力学在很大程度上取决于封闭几何形状及其与界面的相互作用。本综述简要概述了纳米级硬约束和软约束下的水,以及活细胞中的水和生物大分子周围水合壳中的水。与散装水相比,封闭水具有独特的特性,尤其是在成核、结晶、分子动力学和氢键网络方面。在纳米级的封闭环境中,水可以在极低的温度下(从-45 ℃到-120 ℃,在大气压力下)保持液态,这为我们深入了解水的基本物理特性提供了机会,并有可能增进我们对零下温度环境中生命的了解。
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引用次数: 0
Chemical Space for Peptide-based Antimicrobials. 肽类抗菌剂的化学空间。
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-30 DOI: 10.2533/chimia.2024.648
Markus Orsi, Hippolyte Personne, Etienne Bonvin, Thierry Paschoud, Basak Olcay, Xiaoling Hu, Sacha Javor, Jean-Louis Reymond

Multidrug-resistant (MDR) bacteria represent a global public health threat, and antimicrobial peptides (AMPs), derived from naturally occurring linear or cyclic peptides, can provide the solution. However, most AMPs are sensitive to proteases and have poor pharmacokinetics. The EU-funded ERC Advanced Grant SPACE4AMPS aims to identify new AMPs by applying the concepts of chemical space and ligand-based virtual screening, which are well known for small molecule drug discovery, to the world of peptides. We create virtual libraries of peptides and related molecules and use these approaches to select a few tens of compounds for synthesis and detailed. evaluation of antibacterial, toxicity and stability effects. Recent results and prospects of this ongoing project are presented in this review.

耐多药(MDR)细菌是一种全球性的公共卫生威胁,而抗菌肽(AMPs)是从天然存在的线性或环状肽中提取的,可以提供解决方案。然而,大多数抗菌肽对蛋白酶敏感,药代动力学不良。欧盟资助的ERC高级资助项目SPACE4AMPS旨在将化学空间和配体虚拟筛选的概念应用到肽的世界中,从而发现新的AMPs。我们创建了肽和相关分子的虚拟库,并利用这些方法筛选出几十种化合物进行合成和抗菌、毒性和稳定性效果的详细评估。本综述将介绍这一进行中项目的最新成果和前景。
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引用次数: 0
Exploring and Controlling Chemistry Using Quantum Logic. 利用量子逻辑探索和控制化学。
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-30 DOI: 10.2533/chimia.2024.654
Prerna Paliwal, Mikhail Popov, Nanditha Sunil Kumar, Stefan Willitsch

Over the past years, the development of experimental techniques for the coherent manipulation and control of isolated quantum systems has made impressive progress. Such 'quantum-logic' methods are also highly attractive in a chemical context in view of unravelling and controlling the quantum dynamics of molecular collisions and chemical reactions. Quantum technologies have the potential to transform the way chemical dynamics are investigated - by providing highly sensitive methods for state readout and spectroscopy, by opening up new pathways for the quantum-state preparation of molecules and by enabling an improved control of their microscopic behavior on the single-particle level. However, for complex quantum systems like molecules, these techniques are still in their infancy and their considerable potential remains to be unlocked. The aim of the present research program supported by an Advanced Grant of the Swiss National Science Foundation is to merge the fields of quantum science and chemical dynamics by advancing quantum technologies to polyatomic molecular ions and by applying them to the study of ion-molecule collisions and chemical reactions. In this article, we review the salient experimental methods as well as prospects and challenges in the development of molecular quantum technologies and their applications to chemistry.

在过去的几年里,对孤立量子系统进行相干操纵和控制的实验技术的发展取得了令人瞩目的进展。从揭示和控制分子碰撞和化学反应的量子动力学角度来看,这种 "量子逻辑 "方法在化学领域也极具吸引力。量子技术有可能改变研究化学动力学的方式--提供高灵敏度的状态读取和光谱学方法,为分子的量子态制备开辟新的途径,并能在单粒子水平上更好地控制分子的微观行为。然而,对于像分子这样的复杂量子系统,这些技术仍处于起步阶段,其巨大潜力仍有待挖掘。在瑞士国家科学基金会高级资助金的支持下,本研究计划的目标是通过将量子技术应用于多原子分子离子,并将其应用于离子-分子碰撞和化学反应的研究,从而将量子科学和化学动力学领域融合起来。在这篇文章中,我们回顾了分子量子技术及其在化学中应用的主要实验方法、发展前景和挑战。
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引用次数: 0
Hack Your Chemistry. 破解你的化学
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-30 DOI: 10.2533/chimia.2024.677
Michal Juríček

Chemistry has a habit of surprising us. As we dig deeper, sometimes what we find will change the course of our research.

化学总是能给我们带来惊喜。随着我们深入研究,有时我们的发现会改变我们的研究方向。
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引用次数: 0
Thiol-Mediated Uptake (TMU, TIMEUP). 硫醇介导的吸收(TMU,TIMEUP)。
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-30 DOI: 10.2533/chimia.2024.665
Saidbakhrom Saidjalolov, Filipe Coelho, Jules Bouffard, Michael Cognet, Julia Moreno, Nicholas Rose, Naomi Sakai, Stefan Matile

This account briefly summarizes objectives and progress made so far with the Swiss-ERC AdG entitled Translational Dynamic Covalent Exchange Cascades (TIMEUP).

本报告简要概述了题为 "转化动态共价交换级联(TIMEUP)"的瑞士-欧洲研究中心 AdG 项目的目标和迄今取得的进展。
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引用次数: 0
Chemical Tools for Monitoring and Targeting Collagen Cross-linking. 监测和定位胶原交联的化学工具
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-30 DOI: 10.2533/chimia.2024.673
Matthew C Deen, Linus B Boll, Helma Wennemers

The formation of collagen, the most abundant protein in mammals, is vital for the integrity of skin, tendons, and tissue in essentially any organ. Excessive collagen formation is, however, characteristic of fibrotic and malignant diseases, which include major global health issues. The diagnosis of abnormal collagen production and deposition is, therefore, critical for disease prognosis and helps guide treatment decisions. Here, we summarize our research on the development of tailored tools for monitoring and targeting excessive collagen crosslinking. We anticipate these tools will provide a deep understanding at the molecular level of collagen formation in normal and disease conditions with applications in imaging and disease treatment.

胶原蛋白是哺乳动物体内最丰富的蛋白质,它的形成对皮肤、肌腱和任何器官组织的完整性至关重要。然而,胶原蛋白的过度形成是纤维化和恶性疾病的特征,其中包括重大的全球健康问题。因此,诊断胶原蛋白的异常生成和沉积对疾病预后至关重要,并有助于指导治疗决策。在此,我们总结了我们在开发用于监测和靶向过度胶原交联的定制工具方面的研究。我们预计这些工具将在分子水平上深入了解正常和疾病情况下胶原蛋白的形成,并应用于成像和疾病治疗。
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引用次数: 0
Legal and Operational Aspects of Compliance with Scientific Integrity. 遵守科学诚信的法律和操作方面。
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-25 DOI: 10.2533/chimia.2024.589
Monique Weber-Mandrin, Michael Daphinoff, Ines C Weber

Ensuring scientific integrity is of utmost importance in the research community, as it forms the foundation of reliable and credible scientific knowledge. Compliance with scientific integrity involves adhering to ethical principles, research standards, and legal regulations that promote transparency, honesty, and accountability. Fabrication, falsification, and plagiarism are common forms of research misconduct that undermine the credibility and trustworthiness of scientific findings. Institutions must establish clear policies and procedures to address and prevent such misconduct, including mechanisms for reporting, investigation, and appropriate disciplinary actions. This article examines the legal and operational aspects related to compliance with scientific integrity, highlighting key considerations and best practices in this critical domain.

确保科学诚信是科研界的头等大事,因为它是可靠和可信的科学知识的基础。遵守科学诚信包括遵守道德原则、研究标准和法律法规,以促进透明、诚实和问责。捏造、篡改和剽窃是常见的研究不当行为,有损科学发现的可信度和可靠性。科研机构必须制定明确的政策和程序来处理和预防此类不当行为,包括报告、调查和适当的纪律处分机制。本文探讨了与遵守科学诚信相关的法律和操作方面的问题,重点介绍了这一关键领域的主要注意事项和最佳实践。
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引用次数: 0
Enabling a Smooth Transition: Responsible Chemistry Competencies for the European Green Deal. 实现平稳过渡:欧洲绿色交易的负责任化学能力。
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-25 DOI: 10.2533/chimia.2024.606
Jan Mehlich

Chemists are a vital part of the research and innovation (R&I) landscape. With their expertise, they shape progress and, thus, society. In order to live up to this responsibility, it is suggested to prepare young chemists for their future role as innovators with proper training. Here, it is important to go beyond the good scientific practice dimension of research integrity and add discourse performance and value assessments to the class outline of a "responsible chemistry" course. This becomes especially relevant in view of changing demands on chemical research and innovation as envisioned by the European Green Deal through its Horizon Europe funding scheme. This paper outlines the necessity of preparing chemists for the requirements of a green transition R&I policy and shows what that would mean for "ethics in chemistry" education.

化学家是研究与创新(R&I)领域的重要组成部分。他们用自己的专业知识推动进步,进而影响社会。为了不辜负这一责任,建议对年轻化学家进行适当的培训,为他们未来作为创新者的角色做好准备。在这里,重要的是要超越研究诚信的良好科学实践层面,在 "负责任的化学 "课程的课 程大纲中增加业绩和价值评估方面的论述。鉴于欧洲绿色政 策通过其 "地平线欧洲 "资助计划对化学研究和创新提出了不断变化的要求,这一点变得尤为重要。本文概述了培养化学家满足绿色转型研发政策要求的必要性,并说明了这对 "化学伦理学 "教育的意义。
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引用次数: 0
Orchestrating Relevance - Critique of a Questionable Trait of Modern Science Communication. 精心策划相关性--对现代科学传播的一个可疑特征的批判。
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-25 DOI: 10.2533/chimia.2024.594
Antonio Togni

This essay critically analyzes the widespread phenomenon of claiming relevance when reporting original research. Specific examples from an area of method development in organofluorine chemistry demonstrate that the pursuit of worthiness of the corresponding research is mainly justified by putting forward a broad general industrial context that could potentially benefit in form of applications. However, it is deliberately ignored that such applications are in the vast majority of cases highly improbable or objectively unrealistic. Notwithstanding that scientists are nowadays often explicitly forced to orchestrate relevance, be it by researchfinancing institutions and/or journals' reviewers, it is argued that this is, from the point of view of research ethics at least, problematic.

这篇文章批判性地分析了在报告原创性研究时声称相关性的普遍现象。来自有机氟化学方法开发领域的具体实例表明,追求相应研究的价值主要是通过提出一个广泛的工业背景来证明,这种背景有可能以应用的形式使研究受益。然而,人们却有意忽视了这样一个事实,即在绝大多数情况下,这种应用是极不可能或客观上不现实的。尽管如今科学家们经常被研究资助机构和/或期刊审稿人明确强迫协调相关性,但我们认为,至少从研究伦理的角度来看,这是有问题的。
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引用次数: 0
The Multiple Challenges of Handling Scientific Integrity in the Swiss Higher Education System. 瑞士高等教育系统处理科学诚信问题的多重挑战。
IF 1.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-25 DOI: 10.2533/chimia.2024.610
Christian J Leumann

Scientific integrity is the most important aspect that higher education institutions have to take care of, as it conveys credibility and acceptance of science to the public. Although science has a very powerful built-in self-regulation process for detecting and correcting scientific misconduct, there is a need for clear guidelines that have to be adapted on regular intervals to the rapidly changing world caused by scientific developments themselves. Outlined here are recent advances in how Switzerland increases awareness and transparency of scientific misconduct and how it handles cases of misconduct to improve the quality of science.

科学诚信是高等教育机构必须关注的最重要方面,因为它能向公众传递科学的可信度和认可度。尽管科学在发现和纠正科学不端行为方面有一套非常强大的内在自律程序,但仍有必要制定明确的指导方针,这些指导方针必须定期进行调整,以适应科学发展本身所带来的瞬息万变的世界。本文概述了瑞士在如何提高对科学不端行为的认识和透明度以及如何处理不端行为案件以提高科学质量方面的最新进展。
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引用次数: 0
期刊
Chimia
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