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Barcode screening reveals the key role of gold nanoparticle morphology in tumor targeting 条形码筛选揭示了金纳米颗粒形态在肿瘤靶向中的关键作用
Pub Date : 2026-02-07 DOI: 10.1016/j.bmt.2026.100135
Chaojin Li , Feng Gong , Xiaodong Liu , Ang Li
Currently, nanoparticles (NPs) still face challenges in achieving efficient tumor targeted delivery, especially in balancing in vivo distribution and cellular uptake efficiency. A recent study published in Advanced Functional Materials utilized DNA barcoding combined with high-throughput in vivo screening to systematically evaluate the targeting of gold NPs of different shapes and sizes in tumors. The results showed that large-sized triangular gold NPs exhibited the highest cellular uptake efficiency in vitro, and achieved significant tumor enrichment and excellent siRNA delivery in vivo through surface modification of RGD peptides. Further photothermal experiments showed that triangular particles can rapidly raise the temperature to 57 °C in the tumor area, achieving effective tumor ablation. This study indicates that large triangular gold NPs possess advantages in cellular uptake, in vivo enrichment ability, and photothermal therapy potential, providing a new strategy for precise tumor targeted therapy. The study highlights that nanoparticle morphology plays a dominant role in governing in vivo tumor accumulation and therapeutic outcomes.
目前,纳米颗粒(NPs)在实现高效的肿瘤靶向递送方面仍然面临挑战,特别是在平衡体内分布和细胞摄取效率方面。最近发表在《高级功能材料》杂志上的一项研究利用DNA条形码结合高通量体内筛选系统地评估了不同形状和大小的金NPs在肿瘤中的靶向性。结果表明,大尺寸三角形金NPs在体外具有最高的细胞摄取效率,并通过对RGD肽的表面修饰在体内实现了显著的肿瘤富集和优异的siRNA递送。进一步的光热实验表明,三角形粒子可以将肿瘤区域的温度快速升高到57℃,实现有效的肿瘤消融。本研究表明,大三角形金NPs在细胞摄取、体内富集能力和光热治疗潜力方面具有优势,为肿瘤精准靶向治疗提供了新的策略。该研究强调纳米颗粒形态在控制体内肿瘤积累和治疗结果中起主导作用。
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引用次数: 0
Integrated strategy of collagen fiber arrangement-inspired magnetic nanochain-doped ordered biphasic scaffold and gradient magnetic field stimulation for osteochondral regeneration 胶原纤维排列激发磁纳米链掺杂有序双相支架与梯度磁场刺激骨软骨再生的综合策略
Pub Date : 2026-02-04 DOI: 10.1016/j.bmt.2026.100134
Junwei Xu , Yi Cui , Xuemei Sun , Zhiheng Chen , Kun Li , Meili Liu , Ping Li

Background

Osteochondral defects pose significant clinical challenges owing to the complex anisotropic collagen alignment of osteochondral tissue and its limited self-healing capacity. Although mechanically biomimetic scaffolds have been widely applied in osteochondral repair, existing scaffolds exhibit limited structural and functional biomimicry, resulting in osteochondral repair efficacy that requires further improvement.

Technology

Bioinspired by the unique collagen fiber alignment of natural osteochondral tissue, this study developed a technology of magnetically guided ordered biphasic scaffold combined with gradient magnetic field stimulation. Via alkaline dissolution and thermal crosslinking, Fe3O4 nanochains (NCs) were horizontally oriented in the agarose-based cartilage phase and vertically oriented in the poly(ethylene glycol) diacrylate/agarose-based subchondral bone phase. This scaffold system synergized with a 3–15 mT gradient magnetic field (MF) to enable the integrated repair of osteochondral defects.

Results

We adjusted the scaffold's magnetism by modulating the content of Fe3O4 NCs, and further investigated the impacts of the magnetic ordered scaffolds and external MF on the differentiation of bone marrow mesenchymal stem cells. Results showed that the cartilage-phase scaffold (0.025 % w/v NCs, 0.27 emu/g) upregulated type II collagen (chondrogenesis), while the subchondral bone-phase scaffold (1.0 % w/v NCs, 1.20 emu/g) boosted osteogenic differentiation. Specifically, 3 mT static MF enhanced chondrogenesis via ECM-receptor signaling, while 15 mT static MF stimulated osteogenesis by activating PI3K/Akt pathway. Animal studies demonstrated that the magnetic biphasic hierarchical scaffold combined with 3–15 mT gradient MF significantly improved osteochondral repair, including nearly double the new subchondral bone volume fraction, a smoother cartilage surface, and collagen fiber alignment that more closely resembled natural osteochondral tissue. This work highlights the potential of the magnetic ordered scaffold-gradient MF technology in osteochondral repair, and is further poised for synergistic development with 3D bioprinting, intelligent manufacturing, and single-cell sequencing, injecting new impetus into the clinical translation of magnetic tissue engineering.
骨软骨组织具有复杂的各向异性胶原排列和有限的自我修复能力,这给骨软骨缺损带来了重大的临床挑战。虽然机械仿生支架在骨软骨修复中得到了广泛的应用,但现有支架在结构和功能上的仿生性有限,导致骨软骨修复效果有待进一步提高。受天然骨软骨组织独特的胶原纤维排列特性的启发,本研究开发了一种结合梯度磁场刺激的磁引导有序双相支架技术。通过碱性溶解和热交联,Fe3O4纳米链(nc)在琼脂糖基软骨相中水平取向,在聚乙二醇二丙烯酸酯/琼脂糖基软骨下骨相中垂直取向。该支架系统与3 - 15mt梯度磁场(MF)协同作用,实现骨软骨缺损的整体修复。结果通过调节Fe3O4 NCs的含量来调节支架的磁性,并进一步研究磁性有序支架和外源MF对骨髓间充质干细胞分化的影响。结果显示,软骨相支架(0.025% w/v NCs, 0.27 emu/g)上调II型胶原(软骨下骨相支架(1.0% w/v NCs, 1.20 emu/g)促进成骨分化。具体而言,3 mT静态MF通过ecm受体信号通路促进软骨形成,而15 mT静态MF通过激活PI3K/Akt通路刺激骨形成。动物研究表明,磁性双相分层支架结合3-15 mT梯度MF可显著改善骨软骨修复,包括新软骨下骨体积分数几乎翻倍,软骨表面更光滑,胶原纤维排列更接近天然骨软骨组织。本研究突出了磁性有序支架梯度MF技术在骨软骨修复中的潜力,并将进一步与生物3D打印、智能制造、单细胞测序等协同发展,为磁性组织工程的临床应用注入新的动力。
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引用次数: 0
Integrated tardigrade-based biomimetic strategy and stem cell expansion and differentiation for a novel radioprotection approach 基于缓步动物的仿生策略和干细胞的扩增和分化是一种新的辐射防护方法
Pub Date : 2026-01-28 DOI: 10.1016/j.bmt.2025.100132
Biao Zhang , Jun-Nian Zhou , Quan Zeng , Zhi-Rui Liu, Yu-Ting Gao, Fu-Dong Chen, Tao Fan, Ya-Li Jia, Jia-Fei Xi, Xue-Tao Pei, Wen Yue

Background

Tardigrades have attracted widespread research attention due to their extraordinary radiotolerance, of which the damage suppressor protein (DSUP) is regarded as a key molecule responsible for their robust DNA repair capability. How to translate these findings into safe and efficacious radioprotection strategies for humans remains an ongoing research challenge.

Technology

Given that ionizing radiation (IR)-induced hematopoietic failure caused by depletion of bone marrow hematopoietic stem/progenitor cells (HSPCs) is a major cause of mortality, we propose using gene editing and stem cell technologies to precisely knock in DSUP gene into isolated murine HSPCs, thereby generating HSPCs with enhanced radiotolerance. In this study, we first obtained DSUP-modified mouse HSPCs by isolating, culturing, and transfecting mouse HSPCs using lentivirus transfection, as well as DSUP-modified human HSPCs via three stages of hematopoietic induction and differentiation from DSUP-modified human pluripotent stem cells (PSCs).

Results

The radioprotection capacity of DSUP-modified stem cells was confirmed by a series of in vitro assays. Given the differentiation potential of myeloid progenitor cells (MPCs) and without requirement for human leukocyte antigen matching during hematopoietic stem cell transplant, we then obtained DSUP-modified mouse MPCs by differentiated from the expanded mouse HSPCs in polyvinyl alcohol (PVA) culture system for more than 30 days. DSUP-modified MPCs can also maintain lower radiation-induced apoptosis and DNA damage. Pre-infusion of DSUP-modified MPCs improves irradiated-mice survival rate by 30 % without long-term side effects. While not residing in bone marrow or spleen, these cells alleviated hematopoietic failure by restoring peripheral red blood cells and platelets and accelerated hematopoietic recovery. Mechanistically, DSUP forms phase separation structures that can recruit DNA repair proteins to double-strand breaks, promoting homologous recombination repair. Taken together, our results demonstrated DSUP-modified MPCs offer a promising stem cell-based radioprotection technology, highlighting a novel biomimetic approach for radioprotection.
缓步动物由于其特殊的辐射耐受性而引起了广泛的研究关注,其中损伤抑制蛋白(DSUP)被认为是其强大的DNA修复能力的关键分子。如何将这些发现转化为安全有效的人类辐射防护策略仍然是一项正在进行的研究挑战。鉴于电离辐射(IR)诱导的骨髓造血干细胞/祖细胞(HSPCs)耗损引起的造血功能衰竭是导致死亡的主要原因,我们建议使用基因编辑和干细胞技术将DSUP基因精确敲入分离的小鼠HSPCs,从而产生具有增强放射耐受性的HSPCs。在这项研究中,我们首先通过分离、培养和慢病毒转染小鼠HSPCs获得了dsupp修饰的小鼠HSPCs,并通过dsupp修饰的人多能干细胞(PSCs)的造血诱导和分化三个阶段获得了dsupp修饰的人HSPCs。结果通过一系列体外实验证实了dsup修饰的干细胞具有辐射防护能力。考虑到骨髓祖细胞(myeloid progenitor cells, MPCs)的分化潜力,且在造血干细胞移植过程中不需要人白细胞抗原匹配,我们将扩增的小鼠HSPCs在聚乙烯醇(PVA)培养系统中分化30天以上,获得了dsup修饰的小鼠MPCs。dsup修饰的MPCs也可以维持较低的辐射诱导的细胞凋亡和DNA损伤。预输注dsup修饰的MPCs可使辐照小鼠的存活率提高30%,且无长期副作用。虽然这些细胞不存在于骨髓或脾脏中,但它们通过恢复外周血红细胞和血小板,加速造血功能的恢复,减轻了造血功能衰竭。从机制上讲,DSUP形成相分离结构,可以招募DNA修复蛋白到双链断裂,促进同源重组修复。综上所述,我们的研究结果表明,dsup修饰的MPCs提供了一种有前途的基于干细胞的辐射防护技术,突出了一种新的仿生辐射防护方法。
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引用次数: 0
Decellularized extracellular matrix: Advanced bioplatforms for functional tissue restoration via innovative decellularization techniques 脱细胞细胞外基质:通过创新的脱细胞技术实现功能性组织修复的先进生物平台
Pub Date : 2026-01-08 DOI: 10.1016/j.bmt.2025.100131
Zhe Wang , Xiang Lin , Yunpeng Shi , Hong Yan , Yixuan Shang , Haozhen Ren

Background

In recent years, tissue engineering has experienced rapid development, with bioscaffolds emerging as a focal point of research due to their favorable bioactivity, biocompatibility, and capacity to provide mechanical support for cellular growth. The bioscaffolds have great potential in tissue regeneration. However, conventional natural scaffolds and polymer scaffolds pose risks of immunogenicity, while also face challenges in mimicking the in vivo microenvironment and the biochemical and mechanical properties of natural organs/tissues, which collectively limit their repair capability. The development of decellularized extracellular matrix (dECM) technology offers a viable solution to these challenges, demonstrating considerable potential for advancing organ and tissue regeneration.

Technology

This reviews the classification of dECM, outlines various current methods for its preparation, and comprehensively examines its latest advances in tissue repair and regenerative medicine, including applications in skin, bone, nerve, heart, lung, liver, and kidney tissues.

Results

This review systematically examines recent advances in dECM production and regenerative medicine applications. We classify dECM subtypes, detail contemporary decellularization protocols, and highlight their biomedical utility. Superior biocompatibility substantially mitigates post-transplant immune rejection risk, underscoring strong clinical translation potential for tissue engineering.
近年来,组织工程得到了快速发展,生物支架因其良好的生物活性、生物相容性和为细胞生长提供机械支持的能力而成为研究的热点。生物支架在组织再生方面具有很大的潜力。然而,传统的天然支架和聚合物支架存在免疫原性风险,同时在模仿天然器官/组织的体内微环境和生化力学特性方面也面临挑战,这些共同限制了它们的修复能力。脱细胞细胞外基质(dECM)技术的发展为这些挑战提供了可行的解决方案,显示出推进器官和组织再生的巨大潜力。本文综述了dECM的分类,概述了dECM目前的各种制备方法,并全面研究了dECM在组织修复和再生医学方面的最新进展,包括在皮肤、骨骼、神经、心脏、肺、肝和肾组织中的应用。结果本文系统地综述了dECM生产和再生医学应用的最新进展。我们对dECM亚型进行分类,详细介绍当代脱细胞方案,并强调其生物医学用途。优越的生物相容性大大降低了移植后的免疫排斥风险,强调了组织工程的强大临床转化潜力。
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引用次数: 0
Wireless bioelectric stimulation for bone regeneration using magnetoelectric PVDF/BaTiO3 – Fe80Ga20 laminates 利用磁电PVDF/BaTiO3 - Fe80Ga20层压板进行骨再生的无线生物电刺激
Pub Date : 2025-11-20 DOI: 10.1016/j.bmt.2025.100121
H.A. Viraji , Aravinda Abeygunawardane , S.U. Adikary , Sajith Edirisinghe , Aadil Faleel
<div><div>Fracture healing remains a significant clinical challenge, particularly in cases of delayed or impaired recovery, often hindered by inadequate vascularization, patient variability. Conventional stimulation methods relying on implanted electrodes or external coils are constrained by invasiveness, complexity, and patient discomfort. Smart biomaterials capable of providing wireless, localized bioelectric stimulation represent a promising alternative. Among these, magnetoelectric (ME) laminates can convert externally applied magnetic fields into localized therapeutic voltages, enabling non-invasive and patient-specific bone regeneration. Although magnetoelectric systems have shown potential in biomedical stimulation, their electromechanical coupling behavior, tunability, and optimization for orthopedic applications remain insufficiently explored. Understanding these mechanisms through computational modeling is crucial for developing clinically translatable ME-based bone regeneration systems. This study introduces a next-generation trilayer ME laminate integrating a new material pairing: magnetostrictive Galfenol (Fe<sub>80</sub>Ga<sub>20</sub>) with a piezoelectric layer of either poly(vinylidene fluoride)(PVDF) or Barium Titanate (BaTiO<sub>3</sub>). A fully coupled 3D finite-element model was developed in COMSOL Multiphysics 6.0 to simulate magnetostrictive deformation, interfacial strain transfer, and piezoelectric voltage generation under physiologically relevant magnetic field strengths and frequencies. Parametric studies assessed tunability across varying excitation conditions, while comparative analyses evaluated the performance trade-offs between PVDF- and BaTiO<sub>3</sub>-based laminates. Simulations revealed that the proposed trilayer laminate could generate sustained voltage outputs within the osteogenesis-relevant range (100 nV–5 V) without implanted electrodes. Resonance-dependent voltage peaks were sensitive to excitation frequency and adaptable to bone geometry, supporting personalized stimulation protocols. PVDF-based laminates provided higher flexibility and biocompatibility, whereas BaTiO<sub>3</sub>-based laminates achieved superior voltage outputs, highlighting design trade-offs relevant for clinical optimization. This work establishes the engineering feasibility and fundamental electromechanical characteristics of magnetoelectric trilayer laminates for wireless bone stimulation. The deterministic modeling approach, incorporating parameter sweeps for laminate thickness, field amplitude, and excitation frequency, provides a first-level sensitivity framework for device design. Overall, the study bridges computational modeling and translational potential, positioning ME laminates as a next-generation platform for non-invasive, customizable, and patient-centered bone regeneration. These findings lay the groundwork for forthcoming <em>in-vitro</em> and <em>in-vivo</em> validations, advancing the integration of smart magnetoe
骨折愈合仍然是一个重大的临床挑战,特别是在延迟或受损恢复的情况下,通常受到血管化不足和患者变异性的阻碍。依靠植入电极或外部线圈的传统刺激方法受到侵入性、复杂性和患者不适的限制。能够提供无线、局部生物电刺激的智能生物材料是一个很有前途的选择。其中,磁电(ME)层压板可以将外部施加的磁场转换为局部治疗电压,从而实现非侵入性和患者特异性骨再生。尽管磁电系统在生物医学刺激方面显示出潜力,但其机电耦合行为、可调性和骨科应用的优化仍未得到充分探索。通过计算建模了解这些机制对于开发临床可翻译的基于me的骨再生系统至关重要。本研究介绍了一种新一代三层ME层压板,集成了一种新的材料组合:磁致伸缩Galfenol (Fe80Ga20)与聚偏氟乙烯(PVDF)或钛酸钡(BaTiO3)的压电层。在COMSOL Multiphysics 6.0中建立了全耦合三维有限元模型,模拟了与生理相关的磁场强度和频率下的磁致伸缩变形、界面应变传递和压电电压产生。参数研究评估了不同激励条件下的可调性,而比较分析评估了PVDF和batio3基层压板之间的性能权衡。模拟结果表明,在不植入电极的情况下,所提出的三层层叠板可以在成骨相关范围内(100 nV-5 V)产生持续的电压输出。谐振相关的电压峰值对激励频率敏感,并适应骨的几何形状,支持个性化的刺激方案。pvdf基层压板具有更高的灵活性和生物相容性,而batio3基层压板具有优越的电压输出,突出了与临床优化相关的设计权衡。本工作确立了磁电三层复合材料用于无线骨刺激的工程可行性和基本机电特性。确定性建模方法结合层压厚度、场振幅和激励频率的参数扫描,为器件设计提供了一级灵敏度框架。总的来说,该研究将计算建模和转化潜力结合起来,将ME层压板定位为下一代无创、可定制和以患者为中心的骨再生平台。这些发现为即将到来的体外和体内验证奠定了基础,推进了智能磁电材料在临床骨科应用中的整合。
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引用次数: 0
Microenvironment-feedback hydrogel for precise sequential repair of acute infectious wounds 微环境反馈水凝胶用于急性感染性伤口的精确顺序修复
Pub Date : 2025-11-19 DOI: 10.1016/j.bmt.2025.100120
Zixuan Tang , Qingquan Xia , Jian Li , Jun Chen , Xuhua Wu , Jiang Li , Jiangyi Liu , Wei Liu , Ke Rong , Xiangchao Meng
The healing of acute infected wounds is a multi-stage and sequential biological process. Traditional antibacterial dressings are usually a simple superposition of antibacterial properties and active ingredients, lacking effective coupling with the wound microenvironment, and it is difficult to accurately match the continuous process of infected wound healing. In this study, a pH-responsive hydrogel of sodium alginate and carboxymethyl chitosan interpenetrating network was constructed, and tannic acid (TA) and zinc-doped bioglass (BAG) were loaded through hydrogen bonding and hydrophobic interactions. In the acidic environment of infection, the enhancement of intermolecular non-covalent interaction leads to the contraction of hydrogel network and the rapid release of TA. In the alkaline environment of healing, the weakening of intermolecular interaction leads to the expansion of hydrogel network and the continuous release of Zn2+ and Ca2+. In vitro biological evaluation showed that the hydrogel had an effective antibacterial effects against E.coli and S.aureus, and effectively regulated immune response. In addition, the hydrogel effectively removed excessive ROS and significantly increase the activity of cellular antioxidant enzymes, thereby accelerating the wound healing process in animal experiment. This microenvironment-responsive hydrogel provides a new therapeutic strategy for precise sequential repair of acute infectious wounds.
急性感染创面的愈合是一个多阶段连续的生物学过程。传统抗菌敷料通常是抗菌性能与有效成分的简单叠加,缺乏与创面微环境的有效耦合,难以准确匹配感染创面愈合的连续过程。本研究构建了海藻酸钠和羧甲基壳聚糖的ph响应水凝胶互穿网络,通过氢键和疏水相互作用负载单宁酸(TA)和锌掺杂生物玻璃(BAG)。在感染的酸性环境中,分子间非共价相互作用的增强导致水凝胶网络收缩,TA快速释放。在愈合的碱性环境中,分子间相互作用的减弱导致水凝胶网络的扩张和Zn2+和Ca2+的持续释放。体外生物学评价表明,水凝胶对大肠杆菌和金黄色葡萄球菌具有有效的抗菌作用,并能有效调节免疫反应。此外,在动物实验中,水凝胶可以有效去除过量的ROS,显著提高细胞抗氧化酶的活性,从而加速伤口愈合过程。这种微环境反应性水凝胶为急性感染性伤口的精确顺序修复提供了一种新的治疗策略。
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引用次数: 0
Targeting Fcgr1 to repress FAPy-adenine-induced osteoporosis in osteosarcoma receiving chemotherapy 靶向Fcgr1抑制化疗骨肉瘤中fapy腺嘌呤诱导的骨质疏松
Pub Date : 2025-11-14 DOI: 10.1016/j.bmt.2025.100118
Wei Xu , Liwen Song , Qifeng Yu , Shichao Tong , Yi Wang , Yifan Li , Jin Qiu , Zhikun Li
Chemotherapy-induced bone loss in patients with osteosarcoma (OS) has attracted increasing attention worldwide. Previous studies have revealed the interactions between OS cells and osteoclasts via secretion of various cytokines. However, the specific impacts of chemically injured OS cells on osteoclast functions remain unknown. Untargeted metabolomics is a high-throughput analytical technique used to screen potential biomarkers and identify unknown metabolites in various biological samples. In this study, cisplatin (CDDP)-injured OS cell supernatant promoted the osteoclast differentiation of bone marrow macrophages (BMMs). Untargeted metabolomic analysis revealed the metabolic profile of injured OS cells, and FAPy-adenine (FA), which was upregulated by approximately 2000-fold, was identified in the supernatant. FA promoted the osteoclast differentiation of BMMs in a dose-dependent manner. RNA sequencing revealed increased Fc gamma receptor 1 (Fcgr1) expression levels in FA-treated BMMs. Fcgr1 overexpression promoted the osteoclast differentiation of BMMs and Cathepsin K expression, whereas its knockdown inhibited the pro-osteoclast differentiation effect of FA. Furthermore, FA accelerated osteoporosis progression in ovariectomy model rats. Upregulation of Fcgr1 levels promoted bone loss, whereas its silencing inhibited the bone loss induced by FA in ovariectomy model rats. Collectively, these findings suggest that FA released from CDDP-injured OS cells contributes to osteoporosis progression by upregulating Fcgr1 levels, providing new insights into chemotherapy-induced bone loss in patients with OS.
骨肉瘤(OS)患者化疗引起的骨丢失在世界范围内引起了越来越多的关注。先前的研究揭示了骨肉瘤细胞与破骨细胞之间通过分泌各种细胞因子的相互作用。然而,化学损伤的骨肉瘤细胞对破骨细胞功能的具体影响尚不清楚。非靶向代谢组学是一种高通量分析技术,用于筛选潜在的生物标志物和鉴定各种生物样品中的未知代谢物。在本研究中,顺铂(CDDP)损伤的OS细胞上清可促进骨髓巨噬细胞(BMMs)的破骨细胞分化。非靶向代谢组学分析揭示了受损OS细胞的代谢谱,在上清中发现了大约上调2000倍的fapy -腺嘌呤(FA)。FA促进BMMs破骨细胞分化呈剂量依赖性。RNA测序显示,fa处理的bmm中Fc γ受体1 (Fcgr1)表达水平升高。Fcgr1过表达促进BMMs的破骨细胞分化和Cathepsin K的表达,而下调Fcgr1则抑制FA的促破骨细胞分化作用。此外,FA加速了卵巢切除模型大鼠骨质疏松症的进展。在卵巢切除模型大鼠中,上调Fcgr1水平可促进骨质流失,而沉默Fcgr1水平可抑制FA诱导的骨质流失。总之,这些发现表明,从cddp损伤的骨肉瘤细胞释放的FA通过上调Fcgr1水平促进骨质疏松症的进展,为化疗诱导的骨丢失在骨肉瘤患者中提供了新的见解。
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引用次数: 0
Multi-omics advances in understanding cancer drug resistance 多组学在了解癌症耐药性方面的进展
Pub Date : 2025-11-14 DOI: 10.1016/j.bmt.2025.100119
Xuechao Liu , Kunpeng Wei , Enyu Lin , Yi Li , Pengzhen Zhuang , Yanbing Zhou , Guilai Zuo , Zhaojian Niu
Cancer drug resistance presents a significant challenge in modern oncology, necessitating detailed exploration of its underlying mechanisms and the development of effective counterstrategies. This review aims to systematically evaluate the most recent applications and advancements of multi-omics technologies in elucidating the mechanisms of cancer drug resistance. Multi-omics includes genomics, transcriptomics, proteomics, microbiomics, metabolomics, and epigenomics. Notably, emerging methodologies such as single-cell and spatial omics have been instrumental in revealing the biological characteristics and resistance mechanisms of tumor cells across various layers and dimensions. The review highlights resistance mechanisms uncovered through the combined application of multi-omics, including gene mutations and epigenetic modifications, reprogramming of signaling pathways, drug efflux and cytoskeletal reorganization, and DNA repair mechanisms. It also explores novel mechanisms in the tumor immune microenvironment (TIME), metabolic reprogramming, and microbiome interactions. The review assesses the benefits of integrating multi-omics data, the application of these technologies in identifying key genes and pathways, and their role in personalized treatment strategies. It provides a comprehensive understanding of the dynamic changes and heterogeneity in cancer drug resistance to aid precision treatment strategies. Additionally, the article offers insights into the future directions of multi-omics technologies in oncology drug resistance research and discusses the primary challenges ahead. We aim to provide novel perspectives and directions for innovation and optimization in cancer treatment, ultimately enhancing patient prognosis and quality of life in oncology.
癌症耐药是现代肿瘤学的一个重大挑战,需要对其潜在机制进行详细的探索,并制定有效的应对策略。本文综述了多组学技术在肿瘤耐药机制研究中的最新应用和进展。多组学包括基因组学、转录组学、蛋白质组学、微生物组学、代谢组学和表观基因组学。值得注意的是,单细胞组学和空间组学等新兴方法有助于揭示肿瘤细胞在不同层次和维度上的生物学特性和耐药机制。本文重点介绍了通过多组学联合应用揭示的耐药机制,包括基因突变和表观遗传修饰、信号通路重编程、药物外排和细胞骨架重组以及DNA修复机制。它还探讨了肿瘤免疫微环境(TIME)、代谢重编程和微生物组相互作用的新机制。这篇综述评估了整合多组学数据的好处,这些技术在识别关键基因和通路中的应用,以及它们在个性化治疗策略中的作用。它提供了对癌症耐药的动态变化和异质性的全面了解,以帮助精确的治疗策略。此外,本文还提出了多组学技术在肿瘤耐药研究中的未来方向,并讨论了未来的主要挑战。我们的目标是为肿瘤治疗的创新和优化提供新的视角和方向,最终提高肿瘤患者的预后和生活质量。
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引用次数: 0
Integrative cell subtype-to-drug discovery technology for angiomyolipomas ​treatment 血管平滑肌脂肪瘤治疗的整合细胞亚型-药物发现技术
Pub Date : 2025-11-06 DOI: 10.1016/j.bmt.2025.100117
Junxian Cao , Xiao Chang , Shiwen Deng , Hongjun Yang , Gang Guo , Peng Chen
Tuberous sclerosis complex mutation renal angiomyolipomas (TSC-RAML) are benign tumors driven by abnormal growth of mesenchymal-derived cells. Although mTOR inhibitors are clinically used, drug resistance and incomplete tumour shrinkage highlight the need for new treatment approaches. Here, we developed a new strategy combining single-cell transcriptomics, network pharmacology, and functional experiments to identify targeted therapies for TSC-RAMLs. Single-cell RNA sequencing of tumour tissues from 4 TSC-RAML patients uncovered a distinct mesenchymal subpopulation (TSC-RAML-Cells) with upregulated pathways in adipogenesis and mTOR signalling. Using high-dimensional weighted gene co-expression network analysis (hdWGCNA) on TSC-RAML-Cells, we identified three disease-associated modules containing hub genes critical for tumour survival. Cross-referencing these modules with the Connectivity Map (CMAP) drug database prioritized AS-605240 as a potential therapeutic candidate. Protein-protein interaction (PPI) network analysis further revealed PI3KCA as a central target, and molecular dynamics simulations confirmed stable binding between AS-605240 and PI3KCA, with a binding free energy of −7.8 ​kcal/mol, supporting its mechanism of action. In vitro experiments using patient-derived TSC-RAML cells showed that AS-605240 suppressed cell growth in a dose-dependent manner (IC50 ​= ​7.8 ​μM) and increased apoptosis rates through inhibition of the PI3K/AKT pathway. This work not only proposes AS-605240 as a promising therapy for TSC-RAMLs but also provides a scalable “cell subtype-to-drug" discovery framework. By integrating single-cell omics and computational drug repurposing, this approach accelerates precision medicine development for rare diseases.
结节性硬化复杂突变肾血管平滑肌脂肪瘤(TSC-RAML)是由间充质来源细胞异常生长驱动的良性肿瘤。尽管临床上使用mTOR抑制剂,但耐药和肿瘤不完全缩小突出了对新治疗方法的需求。在这里,我们开发了一种结合单细胞转录组学、网络药理学和功能实验的新策略,以确定TSC-RAMLs的靶向治疗方法。对4例TSC-RAML患者肿瘤组织的单细胞RNA测序发现了一个独特的间充质亚群(TSC-RAML细胞),其脂肪形成和mTOR信号通路上调。利用tsc - raml细胞的高维加权基因共表达网络分析(hdWGCNA),我们确定了三个包含对肿瘤生存至关重要的中心基因的疾病相关模块。将这些模块与Connectivity Map (CMAP)药物数据库进行交叉比对,优先考虑as -605240作为潜在的治疗候选药物。蛋白-蛋白相互作用(PPI)网络分析进一步揭示PI3KCA为中心靶点,分子动力学模拟证实as -605240与PI3KCA结合稳定,结合自由能为−7.8 kcal/mol,支持其作用机制。体外实验表明,AS-605240通过抑制PI3K/AKT通路,呈剂量依赖性抑制细胞生长(IC50 = 7.8 μM),增加细胞凋亡率。这项工作不仅提出了as -605240作为tsc - raml的一种有希望的治疗方法,而且还提供了一个可扩展的“细胞亚型到药物”发现框架。通过整合单细胞组学和计算药物再利用,这种方法加速了罕见病精准医学的发展。
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引用次数: 0
Adoptive cell therapy for HBV-associated liver diseases 乙肝病毒相关肝病的过继细胞治疗
Pub Date : 2025-11-03 DOI: 10.1016/j.bmt.2025.100116
Youxi Zhou , Kaizhao Chen , Yang Zhang , Hongwei Cheng , Shuaishuai Zhang
Chronic infection with the hepatitis B virus (HBV) is a common cause of liver disease worldwide, particularly in Asia and Africa, where it is highly prevalent. Currently, therapies for chronic HBV infection, such as nucleoside analogs (NAs), mainly suppress viral replication but rarely achieve a lasting cure. Recently, emerging adoptive cell therapy (ACT), represented by chimeric antigen receptor (CAR)-T, T cell receptor (TCR)-T, and CAR-NK (Natural Killer) cell therapy, have provided new opportunities for the treatment of numerous diseases. For instance, CAR-T cells can be designed to target HBV antigens and kill HBV-infected cells with safety concerns regarding potential side effects and limitations of CAR-T cell exhaustion. TCR-T cells mainly exert their immune activation effects by recognizing antigen peptide-MHC complexes in HBV-infected hepatocytes. Although the antiviral effects of TCR-T are evident in preclinical studies, they are limited by on-target toxicity and carry a risk of transient liver damage. In addition to CAR-T and TCR-T therapies, CAR-NK cell therapy has shown promising prospects in treating HBV-associated liver diseases. To enhance the safety and efficiency of ACT applications in clinical settings, CAR and TCR structures should be rationally optimized, and combined treatment strategies need to be explored. In this review, we summarize the structure and mechanism of ACT, including CAR-T, TCR-T, and CAR-NK cell therapies, as well as their research progress and challenges in the treatment of HBV-associated liver diseases.
慢性乙型肝炎病毒(HBV)感染是世界范围内肝病的常见原因,特别是在亚洲和非洲,这是非常普遍的。目前,治疗慢性HBV感染的方法,如核苷类似物(NAs),主要是抑制病毒复制,但很少能实现持久治愈。近年来,以嵌合抗原受体(CAR)-T、T细胞受体(TCR)-T和CAR- nk(自然杀伤细胞)细胞疗法为代表的过继细胞疗法(ACT)为多种疾病的治疗提供了新的机会。例如,CAR-T细胞可以设计为靶向HBV抗原并杀死HBV感染的细胞,但存在潜在副作用和CAR-T细胞衰竭的安全性问题。TCR-T细胞主要通过识别hbv感染的肝细胞中的抗原肽- mhc复合物来发挥其免疫激活作用。尽管TCR-T的抗病毒作用在临床前研究中是明显的,但它们受到靶毒性的限制,并有短暂肝损伤的风险。除了CAR-T和TCR-T疗法外,CAR-NK细胞疗法在治疗hbv相关肝脏疾病方面也显示出良好的前景。为提高ACT在临床应用的安全性和效率,应合理优化CAR和TCR结构,探索联合治疗策略。本文综述了ACT的结构和作用机制,包括CAR-T、TCR-T和CAR-NK细胞疗法,以及它们在治疗hbv相关肝脏疾病中的研究进展和挑战。
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Biomedical Technology
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