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Affinity-induced covalent protein-protein ligation via the SpyCatcher-SpyTag interaction 通过SpyCatcher-SpyTag相互作用亲和诱导的共价蛋白-蛋白连接
Pub Date : 2023-09-01 DOI: 10.1016/j.greenca.2023.07.001
Jacob O. Fierer , Omar E. Tovar-Herrera , Jonathan Y. Weinstein , Amaranta Kahn , Sarah Moraïs , Itzhak Mizrahi , Edward A. Bayer

Production of economically viable bioethanol is potentially an environmentally and financially worthwhile endeavor. One major source for fermentable sugars is lignocellulose. However, lignocellulosic biomass is difficult to degrade, owing to its inherent structural recalcitrance. Cellulosomes are complexes of cellulases and associated polysaccharide-degrading enzymes bound to a protein scaffold that can efficiently degrade lignocellulose. Integration of the enzyme subunits into the complex depends on intermodular cohesin-dockerin interactions, which are robust but nonetheless non-covalent. The modular architecture of these complexes can be used to assemble artificial designer cellulosomes for advanced nanotechnological applications. Pretreatments that promote lignocellulose degradation involve high temperatures and acidic or alkaline conditions that could dismember designer cellulosomes, thus requiring separation of reaction steps, thereby increasing overall process cost. To overcome these challenges, we developed a means of covalently locking cohesin-dockerin interactions by integrating the chemistry of SpyCatcher-SpyTag approach to target and secure the interaction. The resultant cohesin-conjugated dockerin complex was resistant to high temperatures, SDS, and urea while high affinity and specificity of the interacting modular components were maintained. Using this approach, a covalently locked, bivalent designer cellulosome complex was produced and demonstrated to be enzymatically active on cellulosic substrates. The combination of affinity systems with SpyCatcher-SpyTag chemistry may prove of general use for improving other types of protein ligation systems and creating unconventional, biologically active, covalently locked, affinity-based molecular architectures.

生产经济上可行的生物乙醇可能是一项在环境和财政上都有价值的努力。可发酵糖的一个主要来源是木质纤维素。然而,木质纤维素生物质由于其固有的结构顽固不化而难以降解。纤维素体是纤维素酶和相关多糖降解酶的复合物,结合到蛋白质支架上,可以有效降解木质纤维素。酶亚基在复合物中的整合取决于粘蛋白-dockerin相互作用的相互作用,这种相互作用是强大的,但仍然是非共价的。这些复合物的模块化结构可用于组装用于先进纳米技术应用的人工设计纤维素体。促进木质纤维素降解的预处理涉及高温和酸性或碱性条件,这些条件可能会分解设计的纤维素体,因此需要分离反应步骤,从而增加总体工艺成本。为了克服这些挑战,我们开发了一种共价锁定cohesin-dockerin相互作用的方法,通过集成SpyCatcher SpyTag方法的化学作用来锁定和保护相互作用。所得到的内聚素-缀合的dockerin复合物对高温、SDS和尿素具有抗性,同时保持了相互作用的模块化组分的高亲和力和特异性。使用这种方法,产生了一种共价锁定的二价设计纤维素复合体,并证明其在纤维素基质上具有酶活性。亲和系统与SpyCatcher SpyTag化学的组合可能被证明可用于改进其他类型的蛋白质连接系统,并创建非常规的、生物活性的、共价锁定的、基于亲和性的分子结构。
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引用次数: 1
Green Carbon: Towards a greener world 绿色碳:迈向更绿色的世界
Pub Date : 2023-09-01 DOI: 10.1016/j.greenca.2023.06.001
Xuefeng Lu , Valentin Valtchev
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引用次数: 1
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Green Carbon
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