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Linear dichroism reveals the perpendicular orientation of DNA bases in the RecA and Rad51 recombinase filaments: A possible mechanism for the strand exchange reaction 线性二色性显示了 RecA 和 Rad51 重组酶丝中 DNA 碱基的垂直取向:链交换反应的可能机制。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-04-01 DOI: 10.1002/chir.23664
Masayuki Takahashi, Kentaro Ito, Hiroshi Iwasaki, Bengt Norden

Linear dichroism spectroscopy is used to investigate the structure of RecA family recombinase filaments (RecA and Rad51 proteins) with DNA for clarifying the molecular mechanism of DNA strand exchange promoted by these proteins and its activation. The measurements show that the recombinases promote the perpendicular base orientation of single-stranded DNA only in the presence of activators, indicating the importance of base orientation in the reaction. We summarize the results and discuss the role of DNA base orientation.

线性分色光谱法用于研究 RecA 家族重组酶丝(RecA 和 Rad51 蛋白)与 DNA 的结构,以阐明这些蛋白促进 DNA 链交换及其激活的分子机制。测量结果表明,只有在激活剂存在的情况下,重组酶才能促进单链 DNA 的垂直碱基取向,这表明碱基取向在反应中的重要性。我们对结果进行了总结,并讨论了 DNA 碱基取向的作用。
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引用次数: 0
Biocatalytic enantioselective synthesis of cenobamate, an antiepileptic drug 生物催化对映体选择性合成抗癫痫药物仙氨酰胺。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-03-21 DOI: 10.1002/chir.23660
Vennapusa Haritha, Pulivarthi Deepthi, Rachel Gundamalla, Kommu Nagesh, Suggala V. Satyanarayana, Adari Bhaskar Rao, Sridhar Balasubramanian, Basireddy Venkata Subba Reddy

A green and efficient process for the synthesis of cenobamate has been accomplished in 70% yield and >99% ee through the bio-reduction of β-ketotetrazole using Daucus carota whole plant cells. The corresponding β-hydroxytetrazole was isolated in 60% yield and >98% ee. This is the first report on the biocatalytic reduction of β-ketotetrazole using plant enzymes derived from D. carota root cells with excellent enantioselectivity.

通过使用菊苣全株细胞对 β-酮四唑进行生物还原,完成了一种绿色、高效的苯甲酰氨基甲酸酯合成工艺,收率为 70%,ee >99%。相应的 β-羟基四氮唑的分离率为 60%,ee >98%。这是首次报道利用从胡萝卜根细胞中提取的植物酶生物催化还原β-酮四唑,并具有极佳的对映选择性。
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引用次数: 0
Simultaneous identification and enantioseparation of ofloxacin and duloxetine without the single standard and computational calculation of their inclusion complexes 在没有单一标准的情况下同时鉴定和对映体分离氧氟沙星和度洛西汀,并计算它们的包合物。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-03-07 DOI: 10.1002/chir.23661
Lixia Chen, Xiangjun Li

Given the markedly different pharmacological activities between enantiomeric isomers, it is crucial to encourage the stereoselective determination of chiral drugs in the biological and pharmaceutical fields, and the combination of drugs makes this analysis more complicated and challenging. Herein, a capillary electrophoresis (CE) method for the enantioseparation of ofloxacin and duloxetine was established, enabling the simultaneous identification of four isomers in nonracemic mixtures with enantiomeric excess (ee%) values exceeding 5%. This was achieved through the integration of theoretical simulation and electron circular dichroism (ECD), all without reliance on individual standards. Molecular modeling explained and verified the migration time differences of these isomers in electrophoretic separation. Moreover, the correlation coefficients (R2) between the enantiomeric peak area differentials and ee% were both above 0.99. Recovery rates were quantified using bovine serum as the matrix, with results ranging from 93.32% to 101.03% (RSD = 0.030) and 92.69% to 100.52% (RSD = 0.028) for these two chiral drugs at an ee value of 23.1%, respectively.

由于对映体异构体之间存在明显的药理活性差异,因此在生物和制药领域鼓励立体选择性测定手性药物至关重要,而药物的组合使这一分析变得更加复杂和具有挑战性。本文建立了一种毛细管电泳(CE)方法,用于氧氟沙星和度洛西汀的对映体分离,可同时鉴定非外消旋混合物中的四种异构体,对映体过量(ee%)值超过5%。这是通过理论模拟和电子圆二色性(ECD)的整合实现的,而无需依赖单独的标准。分子建模解释并验证了这些异构体在电泳分离中的迁移时间差异。此外,对映体峰面积差和 ee% 之间的相关系数 (R2 ) 均高于 0.99。以牛血清为基质对这两种手性药物的回收率进行了量化,结果分别为 93.32% 至 101.03%(RSD = 0.030)和 92.69% 至 100.52%(RSD = 0.028),ee 值为 23.1%。
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引用次数: 0
Enantiomeric separation of thiourea derivatives of naringenin on amylose and cellulose polymeric chromatographic chiral columns 在淀粉和纤维素聚合物色谱手性柱上分离柚皮苷硫脲衍生物的对映体。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-03-06 DOI: 10.1002/chir.23659
Imran Ali, Rekia Nabti, Nasser Belboukhari, Khaled Sekkoum, Mohammed El Amin Zaid, Khairedine Kraim, Zeid A. ALOthman, Marcello Locatelli, Ersin Demir

Due to a great demand for amylose and cellulose polymeric chromatographic chiral columns, the enantiomeric separation of thiourea derivatives of naringenin was achieved on the different amylose (Chiralpak-IB) and cellulose chiral (Chiralcel-OJ and Chiralcel-OD-3R) columns with varied chromatographic conditions. The isocratic mobile phases used were ethanol and methanol, where ethanol/hexane and methanol/hexane were used as gradient mode and were prepared in volume/volume relation. The separation and resolution factors for all the enantiomers were in the range of 1.25 to 3.47 and 0.48 to 1.75, respectively. The enantiomeric resolution was obtained within 12 min making fast separation. The docking studies confirmed the chiral recognition mechanisms with binding affinities in the range of −4.7 to −5.7 kcal/mol. The reported compounds have good anticoagulant activities and may be used as anticoagulants in the future. Besides, chiral separation is fast and is useful for enantiomeric separation in any laboratory in the world.

由于对直链淀粉和纤维素聚合物色谱手性色谱柱的需求量很大,本研究采用不同的直链淀粉色谱柱(Chiralpak-IB)和纤维素手性色谱柱(Chiralcel-OJ 和 Chiralcel-OD-3R),在不同的色谱条件下实现了柚皮苷硫脲衍生物对映体的分离。使用的等度流动相为乙醇和甲醇,其中乙醇/正己烷和甲醇/正己烷为梯度模式,以体积/容积关系制备。所有对映体的分离度和分辨度分别为 1.25 至 3.47 和 0.48 至 1.75。对映体在 12 分钟内就得到了快速分离。对接研究证实了手性识别机制,其结合亲和力在 -4.7 至 -5.7 kcal/mol 之间。所报告的化合物具有良好的抗凝活性,将来可用作抗凝剂。此外,手性分离速度快,可用于世界上任何实验室的对映体分离。
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引用次数: 0
Enantiomeric purity of synthetic therapeutic peptides: A review 合成治疗肽的对映体纯度:综述。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-03-06 DOI: 10.1002/chir.23652
Devendra Badgujar, Sree Teja Paritala, Shubham Matre, Nitish Sharma

Synthetic therapeutic peptides are a complex and popular class of pharmaceuticals. In recent years, peptides with proven therapeutic activity have gained significant interest in the market. The determination of synthetic peptide enantiomeric purity plays a critical role in the evaluation of the quality of the medicine. Since racemization is one of the most common side reactions occurring in AAs or peptides, enantiomeric impurities such as D-isomers can form during the peptide synthesis or can be introduced from the starting materials (e.g., AAs). The therapeutic effect of a synthetic or semi-synthetic bioactive peptide molecule depends on its AA enantiomeric purity and secondary/tertiary structure. Therefore, the enantiomeric purity determination for synthetic peptides is supportive for interpreting unwanted therapeutic effects and determining the quality of synthetic peptide therapeutics. However, enantiomeric purity analysis encounters formidable analytical challenges during chromatographic separation, as D/L isomers have identical physical–chemical properties except stereochemical configuration. To ensure peptides AA stereochemical configuration whether in the free or bound state, sensitive and reproducible quantitative analytical method is mandatory. In this regard, numerous analytical techniques were emerged for the quantification of D-isomeric impurities in synthetic peptides, but still, very few reports are available in the literature. Thus, the purpose of this paper is to provide an overview of the importance, regulatory requirements, and various analytical methods used for peptide enantiomeric purity determination. In addition, we discussed the available literature in terms of enantiomeric impurity detection, common hydrolysis procedural aspects, and different analytical strategies used for sample preparation.

合成治疗肽是一类复杂而流行的药物。近年来,经证实具有治疗活性的多肽在市场上获得了极大的关注。合成肽对映体纯度的测定在药品质量评估中起着至关重要的作用。由于消旋化是 AA 或肽中最常见的副反应之一,对映体杂质(如 D-异构体)可能在肽合成过程中形成,也可能从起始原料(如 AA)中引入。合成或半合成生物活性肽分子的治疗效果取决于其 AA 对映体的纯度和二级/三级结构。因此,合成肽对映体纯度的测定有助于解释不必要的治疗效果和确定合成肽疗法的质量。然而,对映体纯度分析在色谱分离过程中遇到了巨大的分析挑战,因为除了立体化学构型外,D/L 异构体具有完全相同的物理化学特性。为了确保肽在游离或结合状态下都具有 AA 立体化学构型,必须采用灵敏且可重复的定量分析方法。在这方面,出现了许多用于定量合成肽中 D-异构体杂质的分析技术,但文献中的报道仍然很少。因此,本文旨在概述肽对映体纯度测定的重要性、法规要求和各种分析方法。此外,我们还从对映体杂质检测、常见水解程序方面以及用于样品制备的不同分析策略等方面讨论了现有文献。
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引用次数: 0
Chiral separations: Recent developments in chiral stationary phases and chromatographic separations of chiral compounds 手性分离:手性固定相和手性化合物色谱分离的最新发展。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-02-29 DOI: 10.1002/chir.23657
Oliver Trapp, Nina Berova, Simona Collina, Gennaro Pescitelli
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引用次数: 0
Chiroptical properties of membrane glycerophospholipids and their chiral backbones 膜甘油磷脂及其手性骨架的光电特性。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-02-28 DOI: 10.1002/chir.23654
Jana Bocková, Adrien D. Garcia, Nykola C. Jones, Søren V. Hoffmann, Cornelia Meinert

Glycerophospholipid membranes are one of the key cellular components. Still, their species-dependent composition and homochirality remain an elusive subject. In the context of the astrophysical circularly polarized light scenario likely involved in the generation of a chiral bias in meteoritic amino and sugar acids in space, and consequently in the origin of life's homochirality on Earth, this study reports the first measurements of circular dichroism and anisotropy spectra of a selection of glycerophospholipids, their chiral backbones and their analogs. The rather low asymmetry in the interaction of UV/VUV circularly polarized light with sn-glycerol-1/3-phosphate indicates that chiral photons would have been unlikely to directly induce symmetry breaking to membrane lipids. In contrast, the anisotropy spectra of d-3-phosphoglyceric acid and d-glyceraldehyde-3-phosphate unveil up to 20 and 100 times higher maximum anisotropy factor values, respectively. This first experimental report, targeted on investigating the origins of phospholipid symmetry breaking, opens up new avenues of research to explore alternative mechanisms leading to membrane lipid homochirality, while providing important clues for the search for chiral biosignatures of extant and/or extinct life in space, in particular for the ExoMars 2028 mission.

甘油磷脂膜是细胞的重要组成部分之一。然而,甘油磷脂膜与物种有关的组成和同手性仍然是一个难以捉摸的问题。天体物理圆偏振光可能与太空中陨石氨基酸和糖酸的手性偏向有关,因此也与地球上生命的同手性起源有关,在此背景下,本研究首次报告了精选甘油磷脂、其手性骨架及其类似物的圆二色性和各向异性光谱的测量结果。紫外/紫外圆偏振光与sn-甘油-1/3-磷酸酯相互作用的不对称性相当低,这表明手性光子不太可能直接引起膜脂的对称性破坏。与此相反,d-3-磷酸甘油酸和 d-甘油醛-3-磷酸的各向异性光谱分别揭示了高达 20 倍和 100 倍的最大各向异性因子值。这份首次以研究磷脂对称性破缺起源为目标的实验报告开辟了新的研究途径,以探索导致膜脂同色性的替代机制,同时为寻找太空中现存和/或已灭绝生命的手性生物特征提供了重要线索,特别是为 ExoMars 2028 火星任务提供了重要线索。
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引用次数: 0
Multidimensional vibrational circular dichroism for insect wings: Comparison of species 昆虫翅膀的多维振动圆二色性:物种比较
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-02-28 DOI: 10.1002/chir.23655
Hisako Sato, Jun Koshoubu, Sayako Inoué, Izuru Kawamura, Akihiko Yamagishi

This study reports the microscopic measurements of vibrational circular dichroism (VCD) on four different insect wings using a quantum cascade laser VCD system equipped with microscopic scanning capabilities (named multi-dimensional VCD [MultiD-VCD]). Wing samples, including (i) beetle, Anomala albopilosa (female), (ii) European hornet, Verspa crabro flavofasciata Cameron, 1903 (female), (iii) tiny dragonfly, Nannophya pygmae Rambur, 1842 (male), and (iv) dragonfly, Symetrum gracile Oguma, 1915 (male), were used in this study. Two-dimensional patterns of VCD signals (~10 mm × 10 mm) were obtained at a spatial resolution of 100 μm. Measurements covered the absorption peaks assigned to amides I and II in the range of 1500–1740 cm−1. The measurements were based on the enhancement of VCD signals for the stereoregular linkage of peptide groups. The patterns were remarkably dependent on the species. In samples (i) and (ii), the wings comprised segregated domains of protein aggregates of different secondary structures. The size of each microdomain was approximately 100 μm. In contrast, no clear VCD spectra were detected in samples (iii) and (iv). One possible reason was that the chain of stereoregular polypeptides was too short to achieve VCD enhancement in samples (iii) and (iv). Notably, the unique features were only observed in the VCD spectra because the IR spectra were nearly the same among the species. The VCD results hinted at the connection of protein microscopic structures with the wing flapping mechanisms of each species.

本研究报告了利用配备显微扫描功能的量子级联激光 VCD 系统(命名为多维 VCD [MultiD-VCD])对四种不同昆虫翅膀进行振动圆二色性(VCD)显微测量的结果。本研究使用的翅膀样本包括:(i) 甲虫 Anomala albopilosa(雌性);(ii) 欧洲大黄蜂 Verspa crabro flavofasciata Cameron,1903(雌性);(iii) 小蜻蜓 Nannophya pygmae Rambur,1842(雄性);(iv) 蜻蜓 Symetrum gracile Oguma,1915(雄性)。以 100 μm 的空间分辨率获得了 VCD 信号的二维图案(约 10 mm × 10 mm)。测量覆盖了酰胺 I 和 II 在 1500-1740 cm-1 范围内的吸收峰。测量基于肽基立体连接的 VCD 信号增强。其模式明显取决于物种。在样品(i)和(ii)中,翼由不同二级结构的蛋白质聚集体的分离域组成。每个微域的大小约为 100 微米。相比之下,样品(iii)和(iv)没有检测到清晰的 VCD 光谱。其中一个可能的原因是样品(iii)和(iv)中的立体多肽链太短,无法实现 VCD 增强。值得注意的是,只有在 VCD 光谱中才能观察到这些独特的特征,因为各物种的红外光谱几乎相同。VCD 结果暗示了蛋白质微观结构与每个物种的拍翅机制之间的联系。
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引用次数: 0
Total synthesis of (6R,12R)-6,12-dimethylpentadecan-2-one, the sex pheromone of Diabrotica balteata LeConte Diabrotica balteata LeConte 的性信息素 (6R,12R)-6,12-dimethylpentadecan-2-one 的全合成。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-02-27 DOI: 10.1002/chir.23658
Jianwei Wu, Chuanwen Lin, Dan Liu, Qinghua Bian, Min Wang, Jiangchun Zhong

Diabrotica balteata LeConte is one of the most important polyphagous agricultural pests. The sex pheromone of this pest was synthesized using Evans asymmetric alkylation, ring-opening reaction of (R)-2-methyloxirane, SN2 alkylation of secondary tosylate, and coupling of chiral tosylate with Grignard reagent as central strategies. The sex pheromone prepared herein would be useful to control D. balteata.

Diabrotica balteata LeConte 是最重要的多食性农业害虫之一。本研究以 Evans 不对称烷基化反应、(R)-2-甲基环氧乙烷的开环反应、仲对甲苯磺酸盐的 SN 2 烷基化反应以及手性对甲苯磺酸盐与格氏试剂的偶联反应为中心策略,合成了该害虫的性信息素。本文制备的性信息素将有助于控制 D. balteata。
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引用次数: 0
Chiral recognition and discrimination studies of tyrosine enantiomers on (−)-18-crown-6-tetracarboxylic acid as a chiral selector by nuclear magnetic resonance spectroscopy and docking simulations 通过核磁共振波谱和对接模拟,研究(-)-18-冠醚-6-四羧酸作为手性选择剂的酪氨酸对映体的手性识别和区分。
IF 2 4区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-02-26 DOI: 10.1002/chir.23656
Gaeun Lee, Suraj Adhikari, Sunho Lee, Jeong Yeon Lee, Yun-Cheol Na, Wonjae Lee, Eunjung Bang

Considering the substantial significance of chiral biomolecules, such as amino acids, in our daily routines, we performed chiral recognition and discrimination of tyrosine (Tyr) enantiomers on (−)-(18-crown-6)-2,3,11,12-tetracarboxylic acid [(−)-18-C-6-TA] as crown-ether type chiral selector (CS) by nuclear magnetic resonance (NMR) spectroscopy and docking simulations. In this study, successful discrimination of the enantiomers of Tyr was achieved, as evidenced by the proton chemical shift differences (ΔΔδ) of Tyr enantiomers observed in the 1H NMR spectra with (−)-18-C-6-TA CS. We compared the results of these two techniques with the findings obtained from high performance liquid chromatography (HPLC) investigations. In both NMR and HPLC experimental and docking simulation studies, a stronger interaction between the L-Tyr enantiomer with (−)-18-C-6-TA CS than the D-Tyr was consistently observed. Also, the binding energy differences (ΔΔEL-D) found in simulation data that correspond to enantioselectivity aligned well with the NMR experimental result.

考虑到氨基酸等手性生物大分子在日常生活中的重要意义,我们以(-)-(18-冠-6)-2,3,11,12-四羧酸[(-)-18-C-6-TA]为冠醚型手性选择子(CS),通过核磁共振(NMR)光谱和对接模拟对酪氨酸(Tyr)对映体进行了手性识别和鉴别。在这项研究中,我们成功地鉴别出了 Tyr 的对映体,这可以从使用 (-)-18-C-6-TA CS 的 1 H NMR 光谱中观察到的 Tyr 对映体的质子化学位移差异(ΔΔΔ)中得到证明。我们将这两种技术的结果与高效液相色谱法(HPLC)的研究结果进行了比较。在 NMR 和 HPLC 实验以及对接模拟研究中,我们一致观察到 L-Tyr 对映异构体与(-)-18-C-6-TA CS 之间的相互作用强于 D-Tyr。此外,模拟数据中与对映体选择性相对应的结合能差异(ΔΔEL-D)与核磁共振实验结果非常吻合。
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引用次数: 0
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Chirality
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